Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: spThin

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/spThin

Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models
3 versions
Latest release: almost 5 years ago
4 dependent packages
2,123 downloads last month

Papers Mentioning spThin 35

10.1002/ece3.6786
<i>SDMtune</i>: An R package to tune and evaluate species distribution models
Cited by: 68
Author(s): Sergio Vignali, Arnaud Barras, Raphaël Arlettaz, Veronika Braunisch
Software Mentions: 14
Published: almost 4 years ago
10.1002/ece3.7294
Determinants of habitat suitability models transferability across geographically disjunct populations: Insights from <i>Vipera ursinii urs</i> <i>inii</i>
Cited by: 8
Author(s): Francesco Cerasoli, Aurélien Besnard, Marc-Antoine Marchand, Paola D’Alessandro, Mattia Iannella, Maurizio Biondi
Software Mentions: 12
Published: over 3 years ago
10.3390/plants10030470
An Orchid in Retrograde: Climate-Driven Range Shift Patterns of Ophrys helenae in Greece
Cited by: 9
Author(s): Martha Charitonidou, Konstantinos Kougioumoutzis, John M. Halley
Software Mentions: 10
Published: over 3 years ago
10.3390/insects12070639
Estimation of the Recent Expansion Rate of Ruspolia nitidula (Orthoptera) on a Regional and Landscape Scale
Cited by: 3
Author(s): Oto Kaláb, Petr Pyszko, Petr Kočárek
Software Mentions: 9
Published: about 3 years ago
10.1038/s41598-019-40531-8
Ligustrum lucidum W. T. Aiton (broad-leaf privet) demonstrates climatic niche shifts during global-scale invasion
Cited by: 17
Author(s): J Dreyer, Pedro Higuchi, Ana Carolina da Silva
Software Mentions: 7
Published: over 5 years ago
10.1038/s41598-021-88577-x
Predicting range shifts of three endangered endemic plants of the Khorassan-Kopet Dagh floristic province under global change
Cited by: 20
Author(s): Mohammad Bagher Erfanian, Mostafa Sagharyan, Farshid Memariani, Hamid Ejtehadi
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-018-34854-1
Evidences for a shared history for spectacled salamanders, haplotypes and climate
Cited by: 14
Author(s): Mattia Iannella, Paola D’Alessandro, Maurizio Biondi
Software Mentions: 4
Published: almost 6 years ago
10.1002/ece3.5913
Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (<i>Polyodon spathula</i>) in the Arkansas River basin, USA
Cited by: 6
Author(s): Andrew Taylor, Thomas Hafen, Colt T. Holley, Alin González, James M. Long
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0157723
Which Factors Determine Spatial Segregation in the South American Opossums (Didelphis aurita and D. albiventris)? An Ecological Niche Modelling and Geometric Morphometrics Approach
Cited by: 33
Author(s): Nilton C. Cáceres, Marcelo de Moraes Weber, Geruza Leal Melo, Carlo Meloro, Jonas Sponchiado, Renan dos Santos Carvalho, Jamile Bubadué
Software Mentions: 3
Published: about 8 years ago
10.1371/journal.pone.0202421
Climatic niche and potential distribution of Tithonia diversifolia (Hemsl.) A. Gray in Africa
Cited by: 15
Author(s): Maxwell C. Obiakara, Yoan Fourcade
Software Mentions: 3
Published: about 6 years ago
10.3390/microorganisms8071065
Tick-Borne Encephalitis Virus and Its European Distribution in Ticks and Endothermic Mammals
Cited by: 16
Author(s): Melanie Walter, Janna R. Vogelgesang, Franz Rubel, Katharina Brugger
Software Mentions: 3
Published: about 4 years ago
10.1002/ece3.7429
Rivers, not refugia, drove diversification in arboreal, sub‐Saharan African snakes
Cited by: 10
Author(s): Kaitlin E. Allen, Eli Greenbaum, Paul M Hime, Walter Paulin Tapondjou N., Viktoria V. Sterkhova, Chifundera Kusamba, Mark‐Oliver Rödel, Johannes Penner, A. Townsend Peterson, Rafe M. Brown
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pntd.0004968
An Ecological Assessment of the Pandemic Threat of Zika Virus
Cited by: 92
Author(s): Colin J. Carlson, Eric R. Dougherty, Wayne M. Getz
Software Mentions: 2
Published: about 8 years ago
10.1002/ece3.3135
Lazarus ecology: Recovering the distribution and migratory patterns of the extinct Carolina parakeet
Cited by: 19
Author(s): Kevin R. Burgio, Colin J. Carlson, Morgan W. Tingley
Software Mentions: 2
Published: over 7 years ago
10.1038/s41597-020-00577-0
A long-term dataset on wild bee abundance in Mid-Atlantic United States
Cited by: 7
Author(s): Melanie Kammerer, John F. Tooker, Christina M. Grozinger
Software Mentions: 2
Published: about 4 years ago
10.1371/journal.pone.0175138
Are fundamental niches larger than the realized? Testing a 50-year-old prediction by Hutchinson
Cited by: 104
Author(s): Jorge Soberón, B. Arroyo-Peña
Software Mentions: 2
Published: over 7 years ago
10.7717/peerj.7220
Climate change and forest plagues: assessing current and future impacts of diprionid sawflies on the pine forests of north-western Mexico
Cited by: 6
Author(s): Víctor M. Aguilera-Molina, Khutzy K. Munguía-Ortega, Eulogio López-Reyes, Andrés Martínez-Aquino, Fadia Sara Ceccarelli
Software Mentions: 2
Published: about 5 years ago
10.7717/peerj.10834
Habitat suitability of cetaceans in the Gulf of Mexico using an ecological niche modeling approach
Cited by: 6
Author(s): Mario Rafael Ramírez-León, María C. García‐Aguilar, Alfonsina E. Romo-Curiel, Zurisaday Ramírez-Mendoza, Arturo Fajardo-Yamamoto, Oscar Sosa‐Nishizaki
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0128675
The Geographic Distribution of a Tropical Montane Bird Is Limited by a Tree: Acorn Woodpeckers (Melanerpes formicivorus) and Colombian Oaks (Quercus humboldtii) in the Northern Andes
Cited by: 22
Author(s): Benjamin G. Freeman, Nicholas A. Mason
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0257716
Mapping and modeling human-black bear interactions in the Catskills region of New York using resource selection probability functions
Cited by: 4
Author(s): Jason S. Hagani, Sara M. Kross, Michael Clark, Rae Wynn‐Grant, Mary E. Blair
Software Mentions: 2
Published: almost 3 years ago
10.7717/peerj.8968
Exploring environmental coverages of species: a new variable contribution estimation methodology for rulesets from the genetic algorithm for rule-set prediction
Cited by: 6
Author(s): Anni Yang, Juan Pablo Gómez, Jason K. Blackburn
Software Mentions: 2
Published: over 4 years ago
10.1007/s13127-017-0337-3
Reconstructed historical distribution and phylogeography unravels non-steppic origin of Caucasotachea vindobonensis (Gastropoda: Helicidae)
Cited by: 10
Author(s): Łukasz Kajtoch, Angus Davison, Adele Grindon, Tamás Deli, Gábor Sramkó, Mariusz Gwardjan, С. С. Крамаренко, Dominika Mierzwa-Szymkowiak, Rafał Ruta, Radosław Ścibior, János Tóth, Christopher M. Wade, Michał Kolasa, Roman Egorov, Zoltán Fehér
Software Mentions: 1
Published: about 7 years ago
10.3390/v13061024
Chikungunya Beyond the Tropics: Where and When Do We Expect Disease Transmission in Europe?
Cited by: 14
Author(s): Nils Benjamin Tjaden, Yanchao Cheng, Carl Beierkuhnlein, Stephanie Margarete Thomas
Software Mentions: 1
Published: over 3 years ago
10.7717/peerj.6281
kuenm: an R package for detailed development of ecological niche models using Maxent
Cited by: 402
Author(s): Marlon E. Cobos, A. Townsend Peterson, Narayani Barve, Luis Osorio‐Olvera
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0237527
Climate change influences on the potential distribution of Dianthus polylepis Bien. ex Boiss. (Caryophyllaceae), an endemic species in the Irano-Turanian region
Cited by: 14
Author(s): Maryam Behroozian, Hamid Ejtehadi, A. Townsend Peterson, Farshid Memariani, M Mesdaghi
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0198925
Mapping global risk levels of Bemisia tabaci in areas of suitability for open field tomato cultivation under current and future climates
Cited by: 46
Author(s): Rodrigo Soares Ramos, Lalit Kumar, Farzin Shabani, Marcelo Coutinho Picanço
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0236103
Climate change and bird extinctions in the Amazon
Cited by: 13
Author(s): Kauê Felippe de Moraes, Marcos Pérsio Dantas Santos, Gabriela Silva Ribeiro Gonçalves, Geovana Linhares de Oliveira, Letícia Gomes, Marcela Guimarães Moreira Lima
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0159450
Mapping Global Potential Risk of Mango Sudden Decline Disease Caused by Ceratocystis fimbriata
Cited by: 34
Author(s): Tarcísio Visintin da Silva Galdino, Sunil Kumar, Leonardo S. S. Oliveira, Acelino C. Alfenas, Lisa Neven, Abdullah M. Al-Sadi, Marcelo Coutinho Picanço
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pone.0214124
Evaluating the spatial distribution of Leishmania parasites in Colombia from clinical samples and human isolates (1999 to 2016)
Cited by: 14
Author(s): Clemencia Ovalle-Bracho, Diana Londoño-Barbosa, Jussep Salgado-Almario, Camila González
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.5177
Machine learning of large‐scale spatial distributions of wild turkeys with high‐dimensional environmental data
Cited by: 43
Author(s): A. Vallely Farrell, Guiming Wang, Scott A. Rush, James A. Martin, Jerrold L. Belant, Adam Butler, Dave Godwin
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.6258
Assessing congruence of opportunistic records and systematic surveys for predicting Hispaniolan mammal species distributions
Cited by: 5
Author(s): Samuel T. Turvey, Rosalind J. Kennerley, Michael A. Hudson, José M. Nuñez-Miño, Richard P. Young
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-018-28468-w
Modeling the distributions of tegu lizards in native and potential invasive ranges
Cited by: 29
Author(s): Catherine S. Jarnevich, Mark A. Hayes, Lee A. Fitzgerald, Amy A. Yackel Adams, Bryan G. Falk, Michelle A. M. Collier, Lea’ R. Bonewell, Page E. Klug, Sergio Naretto, Robert N. Reed
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-018-37205-2
Potential Spatial Distribution of the Newly Introduced Long-horned Tick, Haemaphysalis longicornis in North America
Cited by: 94
Author(s): Ram K. Raghavan, Stephen C. Barker, Marlon E. Cobos, Dayana Barker, Ernest J.M. Teo, Desmond H. Foley, Ryo Nakao, K.E. Lawrence, Allen Heath, A. Townsend Peterson
Software Mentions: 1
Published: over 5 years ago
10.3390/ijerph16183416
Investigating the Current and Future Co-Occurrence of Ambrosia artemisiifolia and Ophraella communa in Europe through Ecological Modelling and Remote Sensing Data Analysis
Cited by: 17
Author(s): Mattia Iannella, Walter De Simone, Paola D’Alessandro, Giulia Console, Maurizio Biondi
Software Mentions: 1
Published: about 5 years ago
10.3390/ani11040997
Habitat Characteristics Coincidence of Dead and Living Long-Tailed Gorals (Naemorhedus caudatus) According to Extreme Snowfall
Cited by: 3
Author(s): Hee-Bok Park, Sungwon Hong
Software Mentions: 1
Published: over 3 years ago