Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: sp
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/sp
Classes and Methods for Spatial Data
134 versions
Latest release: about 1 year ago
804 dependent packages
267,629 downloads last month
Papers Mentioning sp 258
10.1371/journal.pntd.0000766
Phylogeography of Recently Emerged DENV-2 in Southern Viet NamCited by: 55
Author(s): Maia A. Rabaa, Vu Thi Ty Hang, Bridget Wills, Jeremy Farrar, Cameron P. Simmons, Edward C. Holmes
Software Mentions: 5
Published: over 14 years ago
10.3390/healthcare9010022
Models for Heart Failure Admissions and Admission Rates, 2016 through 2018Cited by: 4
Author(s): Clemens Scott Kruse, Brad Beauvais, Matthew Brooks, Michael Mileski, Lawrence V. Fulton
Software Mentions: 5
Published: almost 4 years ago
10.1038/s41598-021-83457-w
European cephalopods distribution under climate-change scenariosCited by: 17
Author(s): Alexandre Schickele, Patrice Francour, Virginie Raybaud
Software Mentions: 5
Published: almost 4 years ago
10.1186/1476-072X-12-39
A cross-sectional analysis of light at night, neighborhood sociodemographics and urinary 6-sulfatoxymelatonin concentrations: implications for the conduct of health studiesCited by: 21
Author(s): Susan Hurley, David Nelson, Erika Garcia, Robert B. Gunier, Andrew Hertz, Peggy Reynolds
Software Mentions: 4
Published: almost 12 years ago
10.1002/ece3.1838
Squares of different sizes: effect of geographical projection on model parameter estimates in species distribution modelingCited by: 14
Author(s): Lara Budic, Gregor Didenko, Carsten F. Dormann
Software Mentions: 4
Published: almost 9 years ago
10.1002/ece3.3359
Multilevel landscape utilization of the Siberian flying squirrel: Scale effects on species habitat useCited by: 13
Author(s): Jaanus Remm, Ilpo K. Hanski, Sakari Tuominen, Vesa Selonen
Software Mentions: 4
Published: about 7 years ago
10.1371/journal.pone.0246391
Variation in the timing of Covid-19 communication across universities in the UKCited by: 9
Author(s): Alejandro Quiroz Flores, Farhana Ferdousi Liza, Husam Quteineh, Barbara Czarnecka
Software Mentions: 4
Published: almost 4 years ago
10.1186/s13002-020-0360-x
Berries, greens, and medicinal herbs—mapping and assessing wild plants as an ecosystem service in Transylvania (Romania)Cited by: 5
Author(s): Ágnes Vári, Ildikó Arany, Ágnes Kalóczkai, Katalin Kelemen, Judith Papp, Bálint Czúcz
Software Mentions: 4
Published: almost 5 years ago
10.1186/s12862-014-0240-x
Sexual dimorphism and natural variation within and among species in the Drosophilaretinal mosaicCited by: 30
Author(s): Maarten Hilbrant, Isabel Almudí, Daniel J. Leite, Linta Kuncheria, Nico Posnien, Maria D. S. Nunes, Alistair P. McGregor
Software Mentions: 4
Published: about 10 years ago
10.1371/journal.pone.0116735
Building the Foundation for International Conservation Planning for Breeding Ducks across the U.S. and Canadian BorderCited by: 19
Author(s): Kevin E. Doherty, Jeffrey S. Evans, Johann Walker, James H. Devries, David W. Howerter
Software Mentions: 4
Published: almost 10 years ago
10.1098/rsos.160900
Prediction limits of mobile phone activity modellingCited by: 4
Author(s): Dániel Kondor, Sébastian Grauwin, Zsófia Kallus, István Gódor, Stanislav Sobolevsky, Carlo Ratti
Software Mentions: 4
Published: almost 8 years ago
10.1098/rsos.171178
Defining the risk landscape in the context of pathogen pollution: <i>Toxoplasma gondii</i> in sea otters along the Pacific RimCited by: 19
Author(s): Tristan L. Burgess, M. Tim Tinker, Melissa A. Miller, James L. Bodkin, Michael J. Murray, Justin A. Saarinen, Linda M. Nichol, Shawn Larson, Patricia A. Conrad, Christine K. Johnson
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pone.0212526
Long-term exposure to more frequent disturbances increases baseline carbon in some ecosystems: Mapping and quantifying the disturbance frequency-ecosystem C relationshipCited by: 7
Author(s): Brian Buma, Thomas L. Thompson
Software Mentions: 4
Published: almost 6 years ago
10.1038/s41598-017-17975-x
Functional redundancy and sensitivity of fish assemblages in European rivers, lakes and estuarine ecosystemsCited by: 31
Author(s): Nils Teichert, Mario Lepage, Alban Sagouis, Ángel Borja, Guillem Chust, Maria Teresa Ferreira, Stéphanie Pasquaud, Rafaela Schinegger, Pedro Segurado, Christine Argillier
Software Mentions: 4
Published: almost 7 years ago
10.1371/journal.pone.0221589
Grouper (Epinephelidae) spawning aggregations affect activity space of grey reef sharks, Carcharhinus amblyrhynchos, in Pohnpei, MicronesiaCited by: 7
Author(s): Kevin L. Rhodes, Ivy E. Baremore, Rachel T. Graham
Software Mentions: 4
Published: over 5 years ago
10.1155/2016/1439090
Potential Distribution of Chagas Disease Vectors (Hemiptera, Reduviidae, Triatominae) in Colombia, Based on Ecological Niche ModelingCited by: 27
Author(s): Gabriel Parra-Henao, Laura C Suárez-Escudero, Sebastián González‐Caro
Software Mentions: 4
Published: almost 9 years ago
10.1371/journal.pone.0201221
Beached bachelors: An extensive study on the largest recorded sperm whale Physeter macrocephalus mortality event in the North SeaCited by: 15
Author(s): Lonneke L. IJsseldijk, Abbo van Neer, Rob Deaville, Lineke Begeman, Marco van de Bildt, Judith M. A. van den Brand, Andrew Brownlow, Richard Czeck, Willy Dabin, Mariel ten Doeschate, Vanessa Herder, Helena Herr, Jooske IJzer, Thierry Jauniaux, Lasse Fast Jensen, Paul D. Jepson, Wendy K Jo, Jan Lakemeyer, Kristina Lehnert, M.F. Leopold, Albert D. M. E. Osterhaus, Matthew Perkins, Uwe Piatkowski, Ellen Prenger‐Berninghoff, Ralf Pund, P. Wohlsein, Andrea Gröne, Ursula Siebert
Software Mentions: 4
Published: over 6 years ago
10.1038/s41598-018-25777-y
Common drivers of seasonal movements on the migration – residency behavior continuum in a large herbivoreCited by: 18
Author(s): Jodie Martin, Vincent Tolon, Nicolas Morellet, Hugues Santin‐Janin, Alain Licoppe, Claude Fischer, Jérôme Bombois, Patrick Patthey, Elias Pesenti, Delphine Chenesseau, Sonia Saı̈d
Software Mentions: 4
Published: over 6 years ago
10.1038/s41598-019-42792-9
Extinction risks of a Mediterranean neo-endemism complex of mountain vipers triggered by climate changeCited by: 25
Author(s): Mohsen Ahmadi, Mahmoud‐Reza Hemami, Mohammad Kaboli, Mansoureh Malekian, Niklaus E. Zimmermann
Software Mentions: 4
Published: over 5 years ago
10.1371/journal.pone.0064744
Population Structure of Atlantic Mackerel (Scomber scombrus)Cited by: 45
Author(s): Teunis Jansen, Henrik Gislason
Software Mentions: 4
Published: over 11 years ago
10.1371/journal.pone.0204399
Predicting residential structures from open source remotely enumerated data using machine learningCited by: 20
Author(s): Hugh J. W. Sturrock, Katelyn Woolheater, Adam Bennett, Ricardo Andrade‐Pacheco, Alemayehu Midekisa
Software Mentions: 4
Published: about 6 years ago
10.1371/journal.pone.0236023
Rapid radiation of humans in South America after the last glacial maximum: A radiocarbon-based studyCited by: 56
Author(s): Luciano Raúl Prates, Gustavo G. Politis, S. Iván Pérez
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.pone.0217809
Using virtual reality and thermal imagery to improve statistical modelling of vulnerable and protected speciesCited by: 8
Author(s): Catherine Leigh, Grace Heron, Ella Wilson, Taylor Gregory, Samuel Clifford, J. Leith Holloway, Miles McBain, Felipé Gonzalez, James McGree, Ross Brown, Kerrie Mengersen, Erin E. Peterson
Software Mentions: 4
Published: almost 5 years ago
10.1371/journal.pone.0226207
Individual variation in migratory movements of chinstrap penguins leads to widespread occupancy of ice-free winter habitats over the continental shelf and deep ocean basins of the Southern OceanCited by: 14
Author(s): Jefferson T. Hinke, María M. Santos, Małgorzata Korczak−Abshire, Gennadi Milinevsky, George M. Watters
Software Mentions: 4
Published: almost 5 years ago
10.1371/journal.pbio.2000942
The Global Distribution and Drivers of Alien Bird Species RichnessCited by: 124
Author(s): Ellie E. Dyer, Phillip Cassey, David W. Redding, Ben Collen, Victoria R. Franks, Kevin J. Gaston, Kate E. Jones, Salit Kark, C. David L. Orme, Tim M. Blackburn
Software Mentions: 4
Published: almost 8 years ago
10.7717/peerj.9898
Native trees of Mexico: diversity, distribution, uses and conservationCited by: 18
Author(s): Oswaldo Téllez‐Valdés, Efisio Mattana, Mauricio Diazgranados, Nicola Kühn, Elena Castillo-Lorenzo, Rafael Lira, Leobardo Montes-Leyva, Isela Rodríguez, Catalina Ortiz, Michael Way, Patricia Dávila, Tiziana Ulian
Software Mentions: 4
Published: about 4 years ago
10.3389/fmicb.2014.00660
Biogeographic patterns of bacterial microdiversity in Arctic deep-sea sediments (HAUSGARTEN, Fram Strait)Cited by: 13
Author(s): Pier Luigi Buttigieg, Alban Ramette
Software Mentions: 4
Published: almost 10 years ago
10.3389/fgene.2021.642504
Genetic Diversity and Demographic History of the Shaggy Soft-Haired Mouse Abrothrix hirta (Cricetidae; Abrotrichini)Cited by: 8
Author(s): Lourdes Valdez, Guillermo D’Elı́a
Software Mentions: 4
Published: over 3 years ago
10.3389/fpls.2019.01188
Elucidation of Hosts, Native Distribution, and Habitat of the Coffee Berry Borer (Hypothenemus hampei) Using Herbaria and Other Museum CollectionsCited by: 5
Author(s): Fernando E. Vega, Lucy Toulmin Smith, Nina M. Davies, Justin Moat, Tomasz Góral, Robert O’Sullivan, Aaron P. Davis
Software Mentions: 4
Published: about 5 years ago
10.1002/ece3.6735
Temperature, topography, soil characteristics, and NDVI drive habitat preferences of a shade‐tolerant invasive grassCited by: 8
Author(s): Anna K. M. Bowen, M. Henry H. Stevens
Software Mentions: 4
Published: about 4 years ago
10.1186/1471-2105-9-507
MetaboMiner – semi-automated identification of metabolites from 2D NMR spectra of complex biofluidsCited by: 169
Author(s): Jianguo Xia, Trent C. Bjorndahl, Peter Tang, David S. Wishart
Software Mentions: 3
Published: about 16 years ago
10.1371/journal.pone.0088006
Plastic and the Nest Entanglement of Urban and Agricultural CrowsCited by: 69
Author(s): Andrea K. Townsend, Christopher M. Barker
Software Mentions: 3
Published: almost 11 years ago
10.1371/journal.pone.0236042
Dispersal patterns of an introduced wild bee, Megachile sculpturalis Smith, 1853 (Hymenoptera: Megachilidae) in European alpine countriesCited by: 18
Author(s): Julia Lanner, Katharina Huchler, Bärbel Pachinger, Claudio Sédivy, Harald Meimberg
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0018946
Regional Environmental Breadth Predicts Geographic Range and Longevity in Fossil Marine GeneraCited by: 37
Author(s): Noel A. Heim, Shanan E. Peters
Software Mentions: 3
Published: over 13 years ago
10.1002/ece3.5159
Breeding latitude predicts timing but not rate of spring migration in a widespread migratory bird in South AmericaCited by: 14
Author(s): Alex E. Jahn, Joaquín Cereghetti, Víctor R. Cueto, Michael T. Hallworth, Douglas J. Levey, Miguel Ângelo Marini, Diego Masson, Marco A. Pizo, José Hernán Sarasola, Diego T. Tuero
Software Mentions: 3
Published: over 5 years ago
10.1007/s11356-020-10610-9
Opportunistically collected data from aerial surveys reveal spatio-temporal distribution patterns of marine debris in German watersCited by: 9
Author(s): Bianca Unger, Helena Herr, Sacha Viquerat, Anita Gilles, Patricia Burkhardt‐Holm, Ursula Siebert
Software Mentions: 3
Published: about 4 years ago
10.1371/journal.pone.0187770
Potential worldwide distribution of Fusarium dry root rot in common beans based on the optimal environment for disease occurrenceCited by: 15
Author(s): Renan Macedo, Lílian P. Sales, Fumitake Yoshida, Silva-Abud Ll, M. Lobo
Software Mentions: 3
Published: about 7 years ago
10.1371/journal.pone.0099292
Bird Community Conservation and Carbon Offsets in Western North AmericaCited by: 6
Author(s): Richard Schuster, Tara G. Martin, Peter Arcese
Software Mentions: 3
Published: over 10 years ago
10.1371/journal.pntd.0006419
Geospatial-temporal distribution of Tegumentary Leishmaniasis in Colombia (2007–2016)Cited by: 11
Author(s): Giovanny Herrera, Aníbal A. Teherán, Iván Pradilla, Mauricio Vera, Juan David Ramírez
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.pntd.0007140
Growing evidence of Plasmodium vivax across malaria-endemic AfricaCited by: 117
Author(s): Katherine A. Twohig, Daniel Pfeffer, J. Kevin Baird, Ric N. Price, Peter A. Zimmerman, Simon I. Hay, Peter W. Gething, Katherine E. Battle, Rosalind E. Howes
Software Mentions: 3
Published: almost 6 years ago
10.1371/journal.pntd.0002503
The Effects of Weather and Climate Change on DengueCited by: 158
Author(s): Felipe J. Colón‐González, Carlo Fezzi, Iain R. Lake, Paul R. Hunter
Software Mentions: 3
Published: about 11 years ago
10.1371/journal.pcbi.1004708
A Sensory-Driven Trade-Off between Coordinated Motion in Social Prey and a Predator’s Visual ConfusionCited by: 6
Author(s): Bertrand H. Lemasson, Colby J. Tanner, Eric Dimperio
Software Mentions: 3
Published: almost 9 years ago
10.1002/ece3.2560
Environmental (in)dependence of a hybrid zone: Insights from molecular markers and ecological niche modeling in a hybrid zone of <i>Origanum</i> (Lamiaceae) on the island of CreteCited by: 12
Author(s): Michael Bariotakis, Konstantina Koutroumpa, Regina Karousou, Stergios Pirintsos
Software Mentions: 3
Published: about 8 years ago
10.1371/journal.pone.0113755
Why Is School Closed Today? Unplanned K-12 School Closures in the United States, 2011–2013Cited by: 34
Author(s): Karen K. Wong, Jianrong Shi, Hongjiang Gao, Yenlik Zheteyeva, Kimberly Lane, Daphne Copeland, Jennifer S. Hendricks, LaFrancis McMurray, Kellye Sliger, Jeanette J. Rainey, Amra Uzicanin
Software Mentions: 3
Published: about 10 years ago
10.1186/s12963-017-0149-x
The contribution of area-level walkability to geographic variation in physical activity: a spatial analysis of 95,837 participants from the 45 and Up Study living in Sydney, AustraliaCited by: 14
Author(s): Darren J Mayne, Geoffrey G. Morgan, Bin Jalaludin, Adrian Bauman
Software Mentions: 3
Published: about 7 years ago
10.1017/S0950268819001250
Spatial diffusion of the 2015–2016 Zika, dengue and chikungunya epidemics in Rio de Janeiro Municipality, BrazilCited by: 6
Author(s): Ana Paula Razal Dalvi, José Ueleres Braga
Software Mentions: 3
Published: almost 6 years ago
10.11604/pamj.2018.30.271.14477
Healthcare utilization for common infectious disease syndromes in Soweto and Klerksdorp, South AfricaCited by: 15
Author(s): Karen K. Wong, Claire von Mollendorf, Neil Martinson, Shane A. Norris, Stefano Tempia, Sibongile Walaza, Ebrahim Variava, Meredith McMorrow, Shabir А. Madhi, Cheryl Cohen, Adam L. Cohen
Software Mentions: 3
Published: almost 7 years ago
10.3390/microorganisms8060911
A Municipality-Based Approach Using Commuting Census Data to Characterize the Vulnerability to Influenza-Like Epidemic: The COVID-19 Application in ItalyCited by: 9
Author(s): Lara Savini, Luca Candeloro, Paolo Calistri, Annamaria Conte
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0245248
Human movement and gully erosion: Investigating feedback mechanisms using Frequency Ratio and Least Cost Path analysis in Tigray, EthiopiaCited by: 12
Author(s): Nadav Nir, Daniel Knitter, Jacob Hardt, Brigitta Schütt
Software Mentions: 3
Published: almost 4 years ago
10.3390/ijerph14060627
Lithium in Drinking Water and Incidence of Suicide: A Nationwide Individual-Level Cohort Study with 22 Years of Follow-UpCited by: 45
Author(s): Nils Knudsen, Jörg Schullehner, Birgitte Hansen, Lisbeth Flindt Jørgensen, Søren Munch Kristiansen, Denitza D. Voutchkova, Thomas Alexander Gerds, Per Kragh Andersen, Kristine Bihrmann, Morten Grønbæk, Lars Vedel Kessing, Annette Kjær Ersbøll
Software Mentions: 3
Published: over 7 years ago
10.1590/1678-4685-GMB-2019-0101
Ecological setup, ploidy diversity, and reproductive biology of Paspalum modestum, a promising wetland forage grass from South AmericaCited by: 1
Author(s): Piyal Karunarathne, Cristian Feduzka, Diego Hojsgaard
Software Mentions: 3
Published: almost 5 years ago
10.1038/s41598-020-60254-5
Spatial epidemiological patterns suggest mechanisms of land-sea transmission for Sarcocystis neurona in a coastal marine mammalCited by: 7
Author(s): Tristan L. Burgess, M. Tim Tinker, Melissa A. Miller, Woutrina A. Smith, James L. Bodkin, Michael J. Murray, Linda M. Nichol, Justin A. Saarinen, Shawn Larson, Joseph A. Tomoleoni, Patricia A. Conrad, Christine K. Johnson
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0224887
Carbonate production of Micronesian reefs suppressed by thermal anomalies and Acanthaster as sea-level risesCited by: 8
Author(s): Robert van Woesik, Christopher William Cacciapaglia
Software Mentions: 3
Published: about 5 years ago
10.1371/journal.pone.0197077
Keeping up with sea-level rise: Carbonate production rates in Palau and Yap, western Pacific OceanCited by: 21
Author(s): Robert van Woesik, Christopher William Cacciapaglia
Software Mentions: 2
Published: over 6 years ago
10.3897/phytokeys.121.33927
A new striking and critically endangered species of Nasa (Loasaceae, Cornales) from North PeruCited by: 4
Author(s): Tilo Henning, Rafael Acuña Castillo, Eric F. Rodríguez Rodríguez, Luis Felipe García Llatas, Maximilian Weigend
Software Mentions: 2
Published: over 5 years ago
10.1186/s12889-021-11629-4
Association between sepsis incidence and regional socioeconomic deprivation and health care capacity in Germany – an ecological studyCited by: 4
Author(s): Norman Rose, Claudia Matthäus‐Krämer, Daniel Schwarzkopf, André Scherag, Sebastian Born, Konrad Reinhart, Carolin Fleischmann
Software Mentions: 2
Published: about 3 years ago
10.1038/srep46734
Size and shape variations of the bony components of sperm whale cochleaeCited by: 12
Author(s): Joseph Schnitzler, Bruno Frédérich, Sven Früchtnicht, Tobias Schaffeld, Johannes Baltzer, Andreas Ruser, Ursula Siebert
Software Mentions: 2
Published: over 7 years ago
10.1038/srep25607
Plant-derived compounds stimulate the decomposition of organic matter in arctic permafrost soilsCited by: 86
Author(s): Birgit Wild, Norman Gentsch, Petr Čapek, Kateřina Diáková, Ricardo J. Eloy Alves, Jiří Bárta, Antje Gittel, Gustaf Hugelius, Anna Knoltsch, Peter Kuhry, Nikolay Lashchinskiy, Robert Mikutta, Juri Palmtag, Christa Schleper, Jörg Schnecker, Olga Shibistova, Mounir Takriti, Vigdis Torsvik, Tim Urich, Margarete Watzka, Hana Šantrůčková, Georg Guggenberger, Andreas Richter
Software Mentions: 2
Published: over 8 years ago