Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: rstan
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/rstan
R Interface to Stan
29 versions
Latest release: 11 months ago
195 dependent packages
66,392 downloads last month
Papers Mentioning rstan 133
10.7717/peerj.11742
Lots of movement, little progress: a review of reptile home range literatureCited by: 19
Author(s): Matthew Crane, Inês Silva, Benjamin Michael Marshall, Colin Thomas Strine
Software Mentions: 21
Published: about 3 years ago
10.7717/peerj.4278
Forecasting biodiversity in breeding birds using best practicesCited by: 37
Author(s): David J. Harris, Shawn D. Taylor, Ethan P. White
Software Mentions: 21
Published: over 6 years ago
10.1002/eap.1898
Spatiotemporal prediction of wildfire size extremes with Bayesian finite sample maximaCited by: 40
Author(s): Maxwell B. Joseph, Matthew W. Rossi, Nathan Mietkiewicz, Adam L. Mahood, Megan E. Cattau, Lise A. St. Denis, R. Chelsea Nagy, Virginia Iglesias, John T. Abatzoglou, Jennifer K. Balch
Software Mentions: 17
Published: about 5 years ago
10.1371/journal.pone.0231982
Rapid processing of neutral and angry expressions within ongoing facial stimulus streams: Is it all about isolated facial features?Cited by: 2
Author(s): Antonio Schettino, Emanuele Porcu, Christopher Gundlach, Christian Keitel, Matthias Müller
Software Mentions: 16
Published: over 4 years ago
10.1016/S2213-2600(21)00175-2
Changes in in-hospital mortality in the first wave of COVID-19: a multicentre prospective observational cohort study using the WHO Clinical Characterisation Protocol UKCited by: 71
Author(s): Annemarie B Docherty, Rachel Mulholland, Nazir Lone, Christopher P. Cheyne, Daniela De Angelis, Karla Díaz-Ordaz, Cara Donegan, Thomas M Drake, Jake Dunning, Sebastian Funk, Marta García‐Fiñana, Michelle Girvan, Hayley Hardwick, Janet Harrison, Antonia Ho, David Hughes, Ruth H. Keogh, Peter Kirwan, Gary Leeming, J. Van-Tam, Riinu Pius, Clark D Russell, Rebecca G. Spencer, Brian D. M. Tom, Lance Turtle, Peter Openshaw, J Kenneth Baillie, Ewen M Harrison, Malcolm G Semple
Software Mentions: 10
Published: about 3 years ago
10.3390/ijerph18020658
Spatial-Temporal Modelling of Disease Risk Accounting for PM2.5 Exposure in the Province of Pavia: An Area of the Po ValleyCited by: 3
Author(s): Leonardo Trivelli, Paola Borrelli, Ennio Cadum, Enrico Pisoni, Simona Villani
Software Mentions: 9
Published: over 3 years ago
10.1186/s13059-020-02072-6
HBA-DEALS: accurate and simultaneous identification of differential expression and splicing using hierarchical Bayesian analysisCited by: 7
Author(s): Guy Karlebach, Peter J. Hansen, Diogo Veiga, Robin Steinhaus, Daniel Daniš, Sheng Li, Olga Anczuków, Peter N. Robinson
Software Mentions: 8
Published: about 4 years ago
10.1002/ece3.7032
A comparison of two methods for estimating measurement repeatability in morphometric studiesCited by: 2
Author(s): Zachariah Wylde, Russell Bonduriansky
Software Mentions: 8
Published: over 3 years ago
10.3390/pathogens9110914
Farm-Level Risk Factors of Increased Abortion and Mortality in Domestic Ruminants during the 2010 Rift Valley Fever Outbreak in Central South AfricaCited by: 1
Author(s): Melinda K. Rostal, Sarah Cleaveland, Claudia Cordel, Lara van Staden, Louise Matthews, Assaf Anyamba, William B. Karesh, Janusz T. Pawęska, Daniel T. Haydon, Noam Ross
Software Mentions: 7
Published: almost 4 years ago
10.3389/fmed.2021.598382
Non-invasive Diagnostic Tests in Cystic Fibrosis-Related Liver Disease: A Diagnostic Test Accuracy Network Meta-AnalysisCited by: 2
Author(s): Ágnes Rita Martonosi, Alexandra Soós, Zoltán Rumbus, Péter Hegyi, V. Izsák, Piroska Pázmány, Marcell Imrei, Szilárd Váncsa, Zsolt Szakács, Andrea Párniczky
Software Mentions: 7
Published: about 3 years ago
10.1038/s42003-020-01482-3
Evaluating insect-host interactions as a driver of species divergence in palm flower weevilsCited by: 11
Author(s): Bruno A. S. de Medeiros, Brian D. Farrell
Software Mentions: 7
Published: almost 4 years ago
10.1073/pnas.2023170118
Global abundance estimates for 9,700 bird speciesCited by: 54
Author(s): Corey T. Callaghan, Shinichi Nakagawa, William K. Cornwell
Software Mentions: 7
Published: over 3 years ago
10.3389/fmicb.2018.02364
Accounting for Bacterial Overlap Between Raw Water Communities and Contaminating Sources Improves the Accuracy of Signature-Based Microbial Source TrackingCited by: 16
Author(s): Moa Hägglund, Stina Bäckman, Anna Macellaro, Petter Lindgren, Emmy Borgmästars, Karin Jacobsson, Rikard Dryselius, Per Stenberg, Andreas Sjödin, Mats Forsman, Jon Ahlinder
Software Mentions: 6
Published: almost 6 years ago
10.1038/s41597-020-00711-y
Individual back-calculated size-at-age based on otoliths from Pacific coral reef fish speciesCited by: 6
Author(s): Fabien Morat, Jérémy Wicquart, Nina M. D. Schiettekatte, Guillemette de Sinéty, Jean-Guy Bienvenu, Jordan M. Casey, Simon J. Brandl, Jason Vii, Jérémy Carlot, S. Degregori, Alexandre Mercière, Pauline Fey, René Galzin, Yves Letourneur, Pierre Sasal, Valeriano Parravicini
Software Mentions: 6
Published: almost 4 years ago
10.3389/fpsyg.2018.02170
Distributed Practice: Rarely Realized in Self-Regulated Mathematical LearningCited by: 10
Author(s): Katharina Barzagar Nazari, Mirjam Ebersbach
Software Mentions: 6
Published: almost 6 years ago
10.1371/journal.pone.0236732
Determining mean and standard deviation of the strong gravity prior through simulationsCited by: 3
Author(s): Björn Jörges, Joan López‐Moliner
Software Mentions: 6
Published: about 4 years ago
10.1002/ece3.4850
Efficient Bayesian analysis of occupancy models with logit link functionsCited by: 15
Author(s): Allan Clark, Res Altwegg
Software Mentions: 5
Published: over 5 years ago
10.1371/journal.pone.0197954
No-U-turn sampling for fast Bayesian inference in ADMB and TMB: Introducing the adnuts and tmbstan R packagesCited by: 50
Author(s): Cole C. Monnahan, Kasper Kristensen
Software Mentions: 5
Published: over 6 years ago
10.1371/journal.pcbi.1008473
A joint modeling approach for longitudinal microbiome data improves ability to detect microbiome associations with diseaseCited by: 7
Author(s): Pamela N. Luna, Jonathan M. Mansbach, Chad A. Shaw
Software Mentions: 5
Published: over 3 years ago
10.1016/j.dib.2016.08.043
Simulated data and code for analysis of herpetofauna response to forest management in the Missouri OzarksCited by: 1
Author(s): Christopher T. Rota, Alexander J. Wolf, Rochelle B. Renken, Robert A. Gitzen, Debby K. Fantz, Robert A. Montgomery, Matthew G. Olson, Larry D. Vangilder, Joshua J. Millspaugh
Software Mentions: 4
Published: almost 8 years ago
10.1371/journal.pone.0234820
Can anthophilous hover flies (Diptera: Syrphidae) discriminate neonicotinoid insecticides in sucrose solution?Cited by: 3
Author(s): C. Scott Clem, Taylor M. Sparbanie, Alec B. Luro, Alexandra N. Harmon‐Threatt
Software Mentions: 4
Published: about 4 years ago
10.1186/s13071-019-3656-8
Predicting West Nile virus transmission in North American bird communities using phylogenetic mixed effects models and eBird citizen science dataCited by: 21
Author(s): Morgan P. Kain, Benjamin M. Bolker
Software Mentions: 4
Published: about 5 years ago
10.1038/s41598-020-66502-y
Quantifying the immediate computational effects of preceding outcomes on subsequent risky choicesCited by: 6
Author(s): Hayley R. Brooks, Peter Sokol‐Hessner
Software Mentions: 4
Published: about 4 years ago
10.1002/bimj.202000112
Nowcasting the COVID‐19 pandemic in BavariaCited by: 54
Author(s): Felix Günther, Andreas Bender, Katharina Katz, Helmut Küchenhoff, Michael Höhle
Software Mentions: 4
Published: almost 4 years ago
10.1371/journal.pgen.1007978
Fast and flexible linear mixed models for genome-wide geneticsCited by: 46
Author(s): Daniel E. Runcie, Lorin Crawford
Software Mentions: 4
Published: over 5 years ago
10.1186/s12966-021-01187-8
Studying dietary intake in daily life through multilevel two-part modelling: a novel analytical approach and its practical applicationCited by: 2
Author(s): Alea Ruf, Andreas Neubauer, Ulrich W. Ebner‐Priemer, Andreas Reif, Silke Matura
Software Mentions: 4
Published: almost 3 years ago
10.1371/journal.pntd.0008881
Status and forecast of leprosy in the still endemic province of Formosa in northern ArgentinaCited by: 2
Author(s): María Rosa Arnaiz, Hernán A. Iuri, José I. Franco, Lucila Arzamendia, María Soledad Santini, Hugo C. Recalde
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0246734
Modernising fish and shark growth curves with Bayesian length-at-age modelsCited by: 23
Author(s): J. J. C. Smart, Gretchen L. Grammer
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0247174
Maternal effects on reproduction in the precocial European hare (Lepus europaeus)Cited by: 8
Author(s): Stéphanie C. Schai-Braun, Peter Steiger, T. Ruf, Walter Arnold, Klaus Hackländer
Software Mentions: 3
Published: over 3 years ago
10.3758/s13414-019-01967-2
Roll tilt self-motion direction discrimination training: First evidence for perceptual learningCited by: 12
Author(s): Manuel Patrick Klaus, Corina G. Schöne, Matthias Hartmann, Daniel M. Merfeld, Michael C. Schubert, Fred W. Mast
Software Mentions: 3
Published: over 4 years ago
10.3389/fvets.2021.734919
Mycobacterium microti Infection in Wild Boar (Sus scrofa): Histopathology Analysis Suggests Containment of the InfectionCited by: 0
Author(s): C. Pigoli, Vito Tranquillo, Lucia Gibelli, Alessandra Gaffuri, Giovanni Loris Alborali, Maria Lodovica Pacciarini, Mariagrazia Zanoni, Maria Beatrice Boniotti, G. Sironi, M. Caniatti, Valeria Grieco
Software Mentions: 3
Published: almost 3 years ago
10.1007/s00415-019-09538-z
Apathy as a behavioural marker of cognitive impairment in Parkinson’s disease: a longitudinal analysisCited by: 27
Author(s): Glen P. Martin, Kathryn McDonald, David Allsop, Peter J. Diggle, Iracema Leroi
Software Mentions: 3
Published: almost 5 years ago
10.1523/JNEUROSCI.0586-21.2021
RIM-Binding Protein 2 Organizes Ca<sup>2+</sup> Channel Topography and Regulates Release Probability and Vesicle Replenishment at a Fast Central SynapseCited by: 12
Author(s): Tanvi Butola, Theocharis Alvanos, Anika Hintze, Peter Koppensteiner, David Kleindienst, Ryuichi Shigemoto, Carolin Wichmann, Tobias Moser
Software Mentions: 3
Published: about 3 years ago
10.1371/journal.pone.0244752
Expert opinion as priors for random effects in Bayesian prediction models: Subclinical ketosis in dairy cows as an exampleCited by: 1
Author(s): Haifang Ni, Irene Klugkist, Saskia van der Drift, R. Jorritsma, G.A. Hooijer, M. Nielen
Software Mentions: 3
Published: over 3 years ago
10.1007/s10265-019-01134-6
Population genetic structure and demography of Magnolia kobus: variety borealis is not supported geneticallyCited by: 12
Author(s): Ichiro Tamaki, Naomichi Kawashima, Suzuki Setsuko, Jung-Hyun Lee, Akemi Itaya, Kyohei Yukitoshi, Nobuhiro Tomaru
Software Mentions: 3
Published: about 5 years ago
10.1186/s12874-020-01091-y
Estimating the number of usability problems affecting medical devices: modelling the discovery matrixCited by: 2
Author(s): Vincent Vandewalle, Alexandre Caron, Coralie Delettrez, Renaud Périchon, Sylvia Pelayo, Alain Duhamel, B. Dervaux
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pone.0242607
Greater effects of mutual cooperation and defection on subsequent cooperation in direct reciprocity games than generalized reciprocity games: Behavioral experiments and analysis using multilevel modelsCited by: 3
Author(s): Yutaka Horita
Software Mentions: 3
Published: almost 4 years ago
10.1016/j.cognition.2020.104310
The crosslinguistic acquisition of sentence structure: Computational modeling and grammaticality judgments from adult and child speakers of English, Japanese, Hindi, Hebrew and K'iche'Cited by: 13
Author(s): Ben Ambridge, Ramya Maitreyee, Tomoko Tatsumi, Laura Doherty, Shira Zicherman, Pedro Mateo Pedro, Colin Bannard, Soumitra Samanta, Stewart M. McCauley, Inbal Arnon, Dani Bekman, Amir Efrati, Ruth A. Berman, Bhuvana Narasimhan, Dipti Misra Sharma, Rukmini Bhaya Nair, Kumiko Fukumura, Seth Campbell, Clifton Pye, Sindy Fabiola Can Pixabaj, Mario Marroquín Pelíz, Margarita Julajuj Mendoza
Software Mentions: 3
Published: about 4 years ago
10.3389/fnhum.2019.00442
Distinguishing Social From Private Intentions Through the Passive Observation of Gaze CuesCited by: 10
Author(s): Mathis Jording, Denis A. Engemann, Hannah Eckert, Gary Bente, Kai Vogeley
Software Mentions: 3
Published: over 4 years ago
10.1186/s40462-021-00256-8
Identifying resting locations of a small elusive forest carnivore using a two-stage model accounting for GPS measurement error and hidden behavioral statesCited by: 2
Author(s): Dalton J. Hance, Katie M. Moriarty, Bruce Hollen, Russell W. Perry
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0252227
Methylation patterns at fledging predict delayed dispersal in a cooperatively breeding birdCited by: 5
Author(s): Andrea L. Liebl, Jeff S. Wesner, Andrew F. Russell, Aaron W. Schrey
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-018-26313-8
Impact of the griffithsin anti-HIV microbicide and placebo gels on the rectal mucosal proteome and microbiome in non-human primatesCited by: 26
Author(s): Lauren Girard, Kenzie Birse, Johanna B. Holm, Pawel Gajer, Mike Humphrys, David Garber, Patricia C. Guenthner, Laura Noël‐Romas, Max Abou, Stuart McCorrister, Garrett Westmacott, Lin Wang, Lisa C. Rohan, Nobuyuki Matoba, Janet M. McNicholl, Kenneth E. Palmer, Jacques Ravel, Adam Burgener
Software Mentions: 3
Published: over 6 years ago
10.3389/fpsyg.2018.01138
Education Does Not Affect Cognitive Decline in Aging: A Bayesian Assessment of the Association Between Education and Change in Cognitive PerformanceCited by: 39
Author(s): Rasmus Berggren, Johanna Nilsson, Martin Lövdén
Software Mentions: 3
Published: about 6 years ago
10.1002/ece3.6954
Using community photography to investigate phenology: A case study of coat molt in the mountain goat (<i>Oreamnos americanus</i>) with missing dataCited by: 11
Author(s): Katarzyna Nowak, Joël Berger, Amy Panikowski, Donald G. Reid, Aerin L. Jacob, Greg Newman, Nicholas E. Young, Jon P. Beckmann, Shane A. Richards
Software Mentions: 2
Published: almost 4 years ago
10.1007/s10646-020-02291-4
A synthesis of patterns of environmental mercury inputs, exposure and effects in New York StateCited by: 6
Author(s): David C. Evers, Amy K. Sauer, Douglas A. Burns, Nicholas S. Fisher, Diane Bertok, Evan M. Adams, Mark Burton, Charles T. Driscoll
Software Mentions: 2
Published: almost 4 years ago
10.3390/e23010050
A Two-Stage Approach for Bayesian Joint Models of Longitudinal and Survival Data: Correcting Bias with Informative PriorCited by: 0
Author(s): Valeria Leiva-Yamaguchi, Danilo Álvares
Software Mentions: 2
Published: over 3 years ago
10.1186/s12940-017-0332-3
Gestational exposure to endocrine disrupting chemicals in relation to infant birth weight: a Bayesian analysis of the HOME StudyCited by: 70
Author(s): Meghan M. Woods, Bruce P. Lanphear, Joseph M. Braun, Lawrence C. McCandless
Software Mentions: 2
Published: almost 7 years ago
10.1111/eva.13122
Incomplete bioinformatic filtering and inadequate age and growth analysis lead to an incorrect inference of harvested‐induced changesCited by: 16
Author(s): Wesley A. Larson, Daniel A. Isermann, Zachary S. Feiner
Software Mentions: 2
Published: about 4 years ago
10.1186/s12874-019-0826-5
A Bayesian non-inferiority approach using experts’ margin elicitation – application to the monitoring of safety eventsCited by: 4
Author(s): Camille Aupiais, Corinne Alberti, Thomas Schmitz, Olivier Baud, Moreno Ursino, Sarah Zohar
Software Mentions: 2
Published: almost 5 years ago
10.14252/foodsafetyfscj.D-20-00007
Attempt of Bayesian Estimation from Left-censored Data Using the Markov Chain Monte Carlo Method: Exploring Cr(VI) Concentrations in Mineral Water ProductsCited by: 3
Author(s): Yoshinari Suzuki, Noriko Tanaka, Hiroshi Akiyama
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pbio.3001391
Cooperating elephants mitigate competition until the stakes get too highCited by: 6
Author(s): Li-Li Li, Joshua M. Plotnik, Shangwen Xia, Estelle Meaux, Rui‐Chang Quan
Software Mentions: 2
Published: almost 3 years ago
10.1093/biostatistics/kxx059
Dose-finding designs for cumulative toxicities using multiple constraintsCited by: 12
Author(s): Shing M. Lee, Moreno Ursino, Ying Kuen Cheung, Sarah Zohar
Software Mentions: 2
Published: almost 7 years ago
10.3389/fpsyg.2021.583209
A Cognitive-Emotional Model to Explain Message Framing Effects: Reducing Meat ConsumptionCited by: 19
Author(s): Valentina Carfora, Massimiliano Pastore, Patrizia Catellani
Software Mentions: 2
Published: over 3 years ago
10.1093/genetics/iyaa048
Additive genetic variance and covariance between relatives in synthetic wheat crosses with variable parental ploidy levelsCited by: 0
Author(s): Laura Puhl, J. Crossa, S. Munilla, Paulino Pérez‐Rodríguez, Rodolfo Juan Carlos Cantet
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pntd.0008640
Leveraging multiple data types to estimate the size of the Zika epidemic in the AmericasCited by: 19
Author(s): Sean M. Moore, Rachel J. Oidtman, Kenji Soda, Amir Siraj, Robert C. Reiner, Christopher M. Barker, T. Alex Perkins
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pntd.0006888
Visceral leishmaniasis: Spatiotemporal heterogeneity and drivers underlying the hotspots in Muzaffarpur, Bihar, IndiaCited by: 23
Author(s): Caroline A. Bulstra, Epke A. Le Rutte, Paritosh Malaviya, Epco Hasker, Luc E. Coffeng, Albert Picado, Om Prakash Singh, Marleen Boelaert, Sake J. de Vlas
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pntd.0008868
Linking mosquito surveillance to dengue fever through Bayesian mechanistic modelingCited by: 7
Author(s): Clinton B. Leach, Jennifer A. Hoeting, Kim M. Pepin, Álvaro Eduardo Eiras, Mevin B. Hooten, Colleen T. Webb
Software Mentions: 2
Published: almost 4 years ago
10.1098/rspb.2020.3202
Quantifying pyrodiversity and its driversCited by: 14
Author(s): Zachary L. Steel, Brandon M. Collins, David B. Sapsis, Scott L. Stephens
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0211138
Leave or stay? Video-logger revealed foraging efficiency of humpback whales under temporal change in prey densityCited by: 9
Author(s): Yu Akiyama, Tomonari Akamatsu, Marianne H. Rasmussen, Maria Iversen, Tadahisa Iwata, Yusuke Goto, Kosuke Aoki, Katsufumi Sato
Software Mentions: 2
Published: over 5 years ago
10.1098/rsos.201159
Reducing variance or helping the poorest? A mouse tracking approach to investigate cognitive bases of inequality aversion in resource allocationCited by: 1
Author(s): Atsushi Ueshima, Tatsuya Kameda
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0126961
Quantifying Geographic Variation in the Climatic Drivers of Midcontinent Wetlands with a Spatially Varying Coefficient ModelCited by: 2
Author(s): Christian Roy
Software Mentions: 2
Published: over 9 years ago
10.1038/s41598-020-65017-w
Potential sex-dependent effects of weather on apparent survival of a high-elevation specialistCited by: 13
Author(s): Eliseo Strinella, Davide Scridel, Mattia Brambilla, Christian Schano, Fränzi Korner‐Nievergelt
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-73472-8
A new data-driven mathematical model dissociates attractiveness from sexual dimorphism of human facesCited by: 9
Author(s): Koyo Nakamura, Katsumi Watanabe
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0221707
Quantitative measures of corneal transparency, derived from objective analysis of depth-resolved corneal images, demonstrated with full-field optical coherence tomographic microscopyCited by: 13
Author(s): Romain Bocheux, Pascal Pernot, Vincent Borderie, Karsten Plamann, Kristina Irsch
Software Mentions: 2
Published: about 5 years ago
10.1007/s13280-019-01233-7
Did the movie Finding Dory increase demand for blue tang fish?Cited by: 14
Author(s): Diogo Veríssimo, Sean C. Anderson, Michael F. Tlusty
Software Mentions: 2
Published: about 5 years ago
10.1016/S2666-5247(20)30200-7
Insight into the practical performance of RT-PCR testing for SARS-CoV-2 using serological data: a cohort studyCited by: 62
Author(s): Zhen Zhang, Qifang Bi, Shisong Fang, Lan Wei, Xin Wang, Jianfan He, Yongsheng Wu, Xiaojian Liu, Wei Gao, Renli Zhang, Wenfeng Gong, Qiru Su, Andrew S. Azman, Justin Lessler, Xuan Zou
Software Mentions: 2
Published: over 3 years ago
10.7554/eLife.67018
Physiology and ecology combine to determine host and vector importance for Ross River virusCited by: 7
Author(s): Morgan P. Kain, Eloise B Skinner, Andrew F. van den Hurk, Hamish McCallum, Erin A. Mordecai
Software Mentions: 2
Published: about 3 years ago
10.7554/eLife.29144
A minimally sufficient model for rib proximal-distal patterning based on genetic analysis and agent-based simulationsCited by: 6
Author(s): Jennifer L. Fogel, Daniel L. Lakeland, In Kyoung Mah, Francesca V. Mariani
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0234072
Use of a mechanistic growth model in evaluating post-restoration habitat quality for juvenile salmonidsCited by: 2
Author(s): Carlos M. Polivka, Joseph R. Mihaljevic, Greg Dwyer
Software Mentions: 2
Published: about 4 years ago
10.1038/s42003-020-01537-5
Controllability over stressor decreases responses in key threat-related brain areasCited by: 27
Author(s): Chirag Limbachia, Kelly A. Morrow, Anastasiia Khibovska, Christian Meyer, Srikanth Padmala, Luiz Pessoa
Software Mentions: 2
Published: over 3 years ago
10.1186/s12884-016-0871-6
Risk factors for vaginal fistula symptoms in Sub-Saharan Africa: a pooled analysis of national household survey dataCited by: 30
Author(s): Mathieu Maheu‐Giroux, Véronique Filippi, Nathalie Maulet, Sékou Samadoulougou, Márcia C. Castro, Nicolas Méda, Mariève Pouliot, Fati Kirakoya‐Samadoulougou
Software Mentions: 2
Published: over 8 years ago
10.1186/s12889-017-4586-z
Long-term effectiveness of mailed nicotine replacement therapy: study protocol of a randomized controlled trial 5-year follow-upCited by: 5
Author(s): Vladyslav Kushnir, Peter Selby, Laurie Zawertailo, Rachel F. Tyndale, Scott T. Leatherdale, John A. Cunningham
Software Mentions: 2
Published: about 7 years ago
10.1002/ece3.7885
Plant‐eating carnivores: Multispecies analysis on factors influencing the frequency of plant occurrence in obligate carnivoresCited by: 5
Author(s): Hiroto Yoshimura, Satoshi Hirata, Kodzue Kinoshita
Software Mentions: 2
Published: about 3 years ago
10.1002/ece3.1985
Birth dates vary with fixed and dynamic maternal features, offspring sex, and extreme climatic events in a high‐latitude marine mammalCited by: 17
Author(s): Jay J. Rotella, J. Terrill Paterson, Robert A. Garrott
Software Mentions: 2
Published: over 8 years ago
10.1186/s12874-016-0107-5
Meta-analytic estimation of measurement variability and assessment of its impact on decision-making: the case of perioperative haemoglobin concentration monitoringCited by: 5
Author(s): Emmanuel Charpentier, Vincent Looten, B. Fahlgren, Alexandre Barna, Loı̈c Guillevin
Software Mentions: 2
Published: over 8 years ago
10.1186/s13071-018-2623-0
Multiflora rose invasion amplifies prevalence of Lyme disease pathogen, but not necessarily Lyme disease riskCited by: 22
Author(s): Solny A. Adalsteinsson, W. Gregory Shriver, Andrias Hojgaard, Jacob L. Bowman, Dustin Brisson, Vincent D’Amico, Jeffrey J. Buler
Software Mentions: 2
Published: over 6 years ago
10.2807/1560-7917.ES.2019.24.42.1900588
Spatial variability in the reproduction number of Ebola virus disease, Democratic Republic of the Congo, January–September 2019Cited by: 9
Author(s): Kenji Mizumoto, Amna Tariq, Kimberlyn Roosa, Jun Kong, Ping Yan, Gerardo Chowell
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12981-018-0198-7
Risk factors and outcomes for the Q151M and T69 insertion HIV-1 resistance mutations in historic UK dataCited by: 3
Author(s): Oliver Stirrup, David Dunn, Anna Tostevin, Caroline Sabin, Anton Pozniak, David Asboe, Anna L. Cox, Chloe Orkin, Fabiola Martin, Patricia A. Cane
Software Mentions: 1
Published: over 6 years ago
10.18632/aging.103687
Risk of death by age and gender from CoVID-19 in Peru, March-May, 2020Cited by: 44
Author(s): César V. Munayco, Gerardo Chowell, Amna Tariq, Eduardo A. Undurraga, Kenji Mizumoto
Software Mentions: 1
Published: about 4 years ago
10.1093/aje/kwaa224
Joint Modeling of Individual Trajectories, Within-Individual Variability, and a Later Outcome: Systolic Blood Pressure Through Childhood and Left Ventricular Mass in Early AdulthoodCited by: 3
Author(s): Richard M A Parker, George Leckie, Harvey Goldstein, Laura D Howe, Jon Heron, Alun D. Hughes, David Phillippo, Kate Tilling
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12916-020-01691-x
Early epidemiological assessment of the transmission potential and virulence of coronavirus disease 2019 (COVID-19) in Wuhan City, China, January–February, 2020Cited by: 41
Author(s): Kenji Mizumoto, Katsushi Kagaya, Gerardo Chowell
Software Mentions: 1
Published: about 4 years ago
10.1186/s12874-021-01384-w
A Bayesian latent class mixture model with censoring for correlation analysis in antimicrobial resistance across populationsCited by: 1
Author(s): Min Zhang, Chong Wang, Annette M. O’Connor
Software Mentions: 1
Published: almost 3 years ago
10.1186/s12874-017-0376-7
A random effects meta-analysis model with Box-Cox transformationCited by: 9
Author(s): Yusuke Yamaguchi, Kazushi Maruo, Christopher Partlett, Richard D Riley
Software Mentions: 1
Published: about 7 years ago
10.1186/s12886-017-0597-x
What does IGRA testing add to the diagnosis of ocular tuberculosis? A Bayesian latent class analysisCited by: 19
Author(s): Rupesh Agrawal, Robert Grant, Bhaskar Gupta, Dinesh Visva Gunasekeran, J.J. González‐López, Peter Addison, Mark Westcott, Carlos Pavésio
Software Mentions: 1
Published: almost 7 years ago
10.1186/s12889-021-11178-w
Rhinovirus prevalence as indicator for efficacy of measures against SARS-CoV-2Cited by: 12
Author(s): Simo Kitanovski, Gibran Horemheb-Rubio, Ortwin Adams, Барбара Гартнер, Thomas Lengauer, Daniel Hoffmann, Rolf Kaiser
Software Mentions: 1
Published: about 3 years ago
10.3390/biom10071069
The Droserasin 1 PSI: A Membrane-Interacting Antimicrobial Peptide from the Carnivorous Plant Drosera capensisCited by: 4
Author(s): Marc A. Sprague-Piercy, Jan C. Bierma, Marquise G. Crosby, Brooke P. Carpenter, Gemma R. Takahashi, Joana Paulino, Ivan Hung, Rongfu Zhang, John Kelly, Natalia Kozlyuk, Xi Chen, Carter T. Butts, Rachel W. Martin
Software Mentions: 1
Published: about 4 years ago
10.1007/s00429-020-02205-4
Role of dopamine and gray matter density in aging effects and individual differences of functional connectomesCited by: 7
Author(s): Benjamín Garzón, Martin Lövdén, Lieke de Boer, Jan Axelsson, Katrine Riklund, Lars Bäckman, Lars Nyberg, Marc Guitart-Masip
Software Mentions: 1
Published: over 3 years ago
10.1002/psp4.12428
Development of a Parsimonious Design for Optimal Classification of Exclusive BreastfeedingCited by: 5
Author(s): Zheng Liu, Aly Diana, Christine Slater, Thomas C. Preston, Rosalind S. Gibson, Lisa A Houghton, Stephen B. Duffull
Software Mentions: 1
Published: about 5 years ago
10.1016/S2468-2667(21)00142-0
Trends in undiagnosed HIV prevalence in England and implications for eliminating HIV transmission by 2030: an evidence synthesis modelCited by: 9
Author(s): Anne M. Presanis, Ross Harris, Peter Kirwan, Ada Miltz, Sara Croxford, Ellen Heinsbroek, Christopher Jackson, Hamish Mohammed, Alison E Brown, Valerie Delpech, O N Gill, Daniela De Angelis
Software Mentions: 1
Published: almost 3 years ago
10.26508/lsa.202000911
Chromosome instability induced by a single defined sister chromatid fusionCited by: 3
Author(s): Katsushi Kagaya, Naoto Noma-Takayasu, Io Yamamoto, Sanki Tashiro, Fuyuki Ishikawa, Makoto Hayashi
Software Mentions: 1
Published: almost 4 years ago
10.1097/MD.0000000000022154
Bayesian analysis of the association between effective strategies of multimodal nonpharmacological intervention and characteristics of cognitive function in nursing home residents with cognitive impairmentCited by: 2
Author(s): Kyosuke Yorozuya, Shingo Yamane, Misako Nobuhisa, Hiroko Owaki, Takeaki Suzuki, Hikaru Okahara, Wataru Iwamori, Hideaki Hanaoka
Software Mentions: 1
Published: about 4 years ago
10.3390/v13061155
Bayesian Binary Mixture Models as a Flexible Alternative to Cut-Off Analysis of ELISA Results, a Case Study of Seoul OrthohantavirusCited by: 4
Author(s): Arno Swart, Miriam Maas, Ankje de Vries, Tryntsje Cuperus, Marieke Opsteegh
Software Mentions: 1
Published: about 3 years ago
10.7717/peerj.11032
Incorporation of feeding functional group information informs explanatory patterns of long-term population changes in fish assemblagesCited by: 2
Author(s): Jason C. Doll, Stephen J. Jacquemin
Software Mentions: 1
Published: over 3 years ago
10.7717/peerj.5417
Local and population-level responses of Greater sage-grouse to oil and gas development and climatic variation in WyomingCited by: 1
Author(s): Rob Roy Ramey, Joe Thorley, Alexander S. Ivey
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pcbi.1008812
Estimating incidence of infection from diverse data sources: Zika virus in Puerto Rico, 2016Cited by: 2
Author(s): Talía M. Quandelacy, Jessica M. Healy, Bradford Greening, Dania M. Rodríguez, Koo‐Whang Chung, Matthew J. Kuehnert, Brad J. Biggerstaff, Emilio Dirlikov, Luis Mier-y-Terán-Romero, Tyler M. Sharp, Stephen H. Waterman, Michael A. Johansson
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pgen.1004102
Comprehensive Functional Annotation of 77 Prostate Cancer Risk LociCited by: 167
Author(s): Dennis J. Hazelett, Suhn Kyong Rhie, Malaina Gaddis, Chunli Yan, Daniel L. Lakeland, Simon Coetzee, Brian E. Henderson, Houtan Noushmehr, Wendy Cozen, Zsofia Kóte-Jarai, Rosalind Eeles, Douglas F. Easton, Christopher A. Haiman, Wange Lu, Peggy J. Farnham, Gerhard A. Coetzee
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0206078
Time wears on: Assessing how bone wears using 3D surface texture analysisCited by: 37
Author(s): Naomi L. Martisius, Isabelle Sidéra, Mark N. Grote, Teresa E. Steele, Shannon P. McPherron, Ellen Schulz‐Kornas
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0218375
Multivariate temporal modeling of crime with dynamic linear modelsCited by: 2
Author(s): Nathaniel Garton, Jarad Niemi
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0206985
Time and frequency dependent changes in resting state EEG functional connectivity following lipopolysaccharide challenge in ratsCited by: 16
Author(s): Matthew A. Albrecht, Chloe N. Vaughn, Molly Erickson, Sarah M. Clark, Leonardo H. Tonelli
Software Mentions: 1
Published: almost 6 years ago
10.1007/s13524-020-00889-1
A Bayesian Reconstruction of a Historical Population in Finland, 1647–1850Cited by: 8
Author(s): Miikka Voutilainen, Jouni Helske, Harri Högmander
Software Mentions: 1
Published: over 4 years ago