cran: rstan | Projects | Ecosyste.ms: Papers

10.7717/peerj.11742

Lots of movement, little progress: a review of reptile home range literature
Cited by: 19
Author(s): Matthew Crane, Inês Silva, Benjamin Michael Marshall, Colin Thomas Strine
Software Mentions: 21
Published: about 3 years ago

10.7717/peerj.4278

Forecasting biodiversity in breeding birds using best practices
Cited by: 37
Author(s): David J. Harris, Shawn D. Taylor, Ethan P. White
Software Mentions: 21
Published: over 6 years ago

10.1002/eap.1898

Spatiotemporal prediction of wildfire size extremes with Bayesian finite sample maxima
Cited by: 40
Author(s): Maxwell B. Joseph, Matthew W. Rossi, Nathan Mietkiewicz, Adam L. Mahood, Megan E. Cattau, Lise A. St. Denis, R. Chelsea Nagy, Virginia Iglesias, John T. Abatzoglou, Jennifer K. Balch
Software Mentions: 17
Published: about 5 years ago

10.1371/journal.pone.0231982

Rapid processing of neutral and angry expressions within ongoing facial stimulus streams: Is it all about isolated facial features?
Cited by: 2
Author(s): Antonio Schettino, Emanuele Porcu, Christopher Gundlach, Christian Keitel, Matthias Müller
Software Mentions: 16
Published: over 4 years ago

10.1016/S2213-2600(21)00175-2

Changes in in-hospital mortality in the first wave of COVID-19: a multicentre prospective observational cohort study using the WHO Clinical Characterisation Protocol UK
Cited by: 71
Author(s): Annemarie B Docherty, Rachel Mulholland, Nazir Lone, Christopher P. Cheyne, Daniela De Angelis, Karla Díaz-Ordaz, Cara Donegan, Thomas M Drake, Jake Dunning, Sebastian Funk, Marta García‐Fiñana, Michelle Girvan, Hayley Hardwick, Janet Harrison, Antonia Ho, David Hughes, Ruth H. Keogh, Peter Kirwan, Gary Leeming, J. Van-Tam, Riinu Pius, Clark D Russell, Rebecca G. Spencer, Brian D. M. Tom, Lance Turtle, Peter Openshaw, J Kenneth Baillie, Ewen M Harrison, Malcolm G Semple
Software Mentions: 10
Published: about 3 years ago

10.3390/ijerph18020658

Spatial-Temporal Modelling of Disease Risk Accounting for PM2.5 Exposure in the Province of Pavia: An Area of the Po Valley
Cited by: 3
Author(s): Leonardo Trivelli, Paola Borrelli, Ennio Cadum, Enrico Pisoni, Simona Villani
Software Mentions: 9
Published: over 3 years ago

10.1186/s13059-020-02072-6

HBA-DEALS: accurate and simultaneous identification of differential expression and splicing using hierarchical Bayesian analysis
Cited by: 7
Author(s): Guy Karlebach, Peter J. Hansen, Diogo Veiga, Robin Steinhaus, Daniel Daniš, Sheng Li, Olga Anczuków, Peter N. Robinson
Software Mentions: 8
Published: about 4 years ago

10.1002/ece3.7032

A comparison of two methods for estimating measurement repeatability in morphometric studies
Cited by: 2
Author(s): Zachariah Wylde, Russell Bonduriansky
Software Mentions: 8
Published: over 3 years ago

10.3390/pathogens9110914

Farm-Level Risk Factors of Increased Abortion and Mortality in Domestic Ruminants during the 2010 Rift Valley Fever Outbreak in Central South Africa
Cited by: 1
Author(s): Melinda K. Rostal, Sarah Cleaveland, Claudia Cordel, Lara van Staden, Louise Matthews, Assaf Anyamba, William B. Karesh, Janusz T. Pawęska, Daniel T. Haydon, Noam Ross
Software Mentions: 7
Published: almost 4 years ago

10.3389/fmed.2021.598382

Non-invasive Diagnostic Tests in Cystic Fibrosis-Related Liver Disease: A Diagnostic Test Accuracy Network Meta-Analysis
Cited by: 2
Author(s): Ágnes Rita Martonosi, Alexandra Soós, Zoltán Rumbus, Péter Hegyi, V. Izsák, Piroska Pázmány, Marcell Imrei, Szilárd Váncsa, Zsolt Szakács, Andrea Párniczky
Software Mentions: 7
Published: about 3 years ago

10.1038/s42003-020-01482-3

Evaluating insect-host interactions as a driver of species divergence in palm flower weevils
Cited by: 11
Author(s): Bruno A. S. de Medeiros, Brian D. Farrell
Software Mentions: 7
Published: almost 4 years ago

10.1073/pnas.2023170118

Global abundance estimates for 9,700 bird species
Cited by: 54
Author(s): Corey T. Callaghan, Shinichi Nakagawa, William K. Cornwell
Software Mentions: 7
Published: over 3 years ago

10.3389/fmicb.2018.02364

Accounting for Bacterial Overlap Between Raw Water Communities and Contaminating Sources Improves the Accuracy of Signature-Based Microbial Source Tracking
Cited by: 16
Author(s): Moa Hägglund, Stina Bäckman, Anna Macellaro, Petter Lindgren, Emmy Borgmästars, Karin Jacobsson, Rikard Dryselius, Per Stenberg, Andreas Sjödin, Mats Forsman, Jon Ahlinder
Software Mentions: 6
Published: almost 6 years ago

10.1038/s41597-020-00711-y

Individual back-calculated size-at-age based on otoliths from Pacific coral reef fish species
Cited by: 6
Author(s): Fabien Morat, Jérémy Wicquart, Nina M. D. Schiettekatte, Guillemette de Sinéty, Jean-Guy Bienvenu, Jordan M. Casey, Simon J. Brandl, Jason Vii, Jérémy Carlot, S. Degregori, Alexandre Mercière, Pauline Fey, René Galzin, Yves Letourneur, Pierre Sasal, Valeriano Parravicini
Software Mentions: 6
Published: almost 4 years ago

10.3389/fpsyg.2018.02170

Distributed Practice: Rarely Realized in Self-Regulated Mathematical Learning
Cited by: 10
Author(s): Katharina Barzagar Nazari, Mirjam Ebersbach
Software Mentions: 6
Published: almost 6 years ago

10.1371/journal.pone.0236732

Determining mean and standard deviation of the strong gravity prior through simulations
Cited by: 3
Author(s): Björn Jörges, Joan López‐Moliner
Software Mentions: 6
Published: about 4 years ago

10.1002/ece3.4850

Efficient Bayesian analysis of occupancy models with logit link functions
Cited by: 15
Author(s): Allan Clark, Res Altwegg
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0197954

No-U-turn sampling for fast Bayesian inference in ADMB and TMB: Introducing the adnuts and tmbstan R packages
Cited by: 50
Author(s): Cole C. Monnahan, Kasper Kristensen
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pcbi.1008473

A joint modeling approach for longitudinal microbiome data improves ability to detect microbiome associations with disease
Cited by: 7
Author(s): Pamela N. Luna, Jonathan M. Mansbach, Chad A. Shaw
Software Mentions: 5
Published: over 3 years ago

10.1016/j.dib.2016.08.043

Simulated data and code for analysis of herpetofauna response to forest management in the Missouri Ozarks
Cited by: 1
Author(s): Christopher T. Rota, Alexander J. Wolf, Rochelle B. Renken, Robert A. Gitzen, Debby K. Fantz, Robert A. Montgomery, Matthew G. Olson, Larry D. Vangilder, Joshua J. Millspaugh
Software Mentions: 4
Published: almost 8 years ago

10.1371/journal.pone.0234820

Can anthophilous hover flies (Diptera: Syrphidae) discriminate neonicotinoid insecticides in sucrose solution?
Cited by: 3
Author(s): C. Scott Clem, Taylor M. Sparbanie, Alec B. Luro, Alexandra N. Harmon‐Threatt
Software Mentions: 4
Published: about 4 years ago

10.1186/s13071-019-3656-8

Predicting West Nile virus transmission in North American bird communities using phylogenetic mixed effects models and eBird citizen science data
Cited by: 21
Author(s): Morgan P. Kain, Benjamin M. Bolker
Software Mentions: 4
Published: about 5 years ago

10.1038/s41598-020-66502-y

Quantifying the immediate computational effects of preceding outcomes on subsequent risky choices
Cited by: 6
Author(s): Hayley R. Brooks, Peter Sokol‐Hessner
Software Mentions: 4
Published: about 4 years ago

10.1002/bimj.202000112

Nowcasting the COVID‐19 pandemic in Bavaria
Cited by: 54
Author(s): Felix Günther, Andreas Bender, Katharina Katz, Helmut Küchenhoff, Michael Höhle
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pgen.1007978

Fast and flexible linear mixed models for genome-wide genetics
Cited by: 46
Author(s): Daniel E. Runcie, Lorin Crawford
Software Mentions: 4
Published: over 5 years ago

10.1186/s12966-021-01187-8

Studying dietary intake in daily life through multilevel two-part modelling: a novel analytical approach and its practical application
Cited by: 2
Author(s): Alea Ruf, Andreas Neubauer, Ulrich W. Ebner‐Priemer, Andreas Reif, Silke Matura
Software Mentions: 4
Published: almost 3 years ago

10.1371/journal.pntd.0008881

Status and forecast of leprosy in the still endemic province of Formosa in northern Argentina
Cited by: 2
Author(s): María Rosa Arnaiz, Hernán A. Iuri, José I. Franco, Lucila Arzamendia, María Soledad Santini, Hugo C. Recalde
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0246734

Modernising fish and shark growth curves with Bayesian length-at-age models
Cited by: 23
Author(s): J. J. C. Smart, Gretchen L. Grammer
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0247174

Maternal effects on reproduction in the precocial European hare (Lepus europaeus)
Cited by: 8
Author(s): Stéphanie C. Schai-Braun, Peter Steiger, T. Ruf, Walter Arnold, Klaus Hackländer
Software Mentions: 3
Published: over 3 years ago

10.3758/s13414-019-01967-2

Roll tilt self-motion direction discrimination training: First evidence for perceptual learning
Cited by: 12
Author(s): Manuel Patrick Klaus, Corina G. Schöne, Matthias Hartmann, Daniel M. Merfeld, Michael C. Schubert, Fred W. Mast
Software Mentions: 3
Published: over 4 years ago

10.3389/fvets.2021.734919

Mycobacterium microti Infection in Wild Boar (Sus scrofa): Histopathology Analysis Suggests Containment of the Infection
Cited by: 0
Author(s): C. Pigoli, Vito Tranquillo, Lucia Gibelli, Alessandra Gaffuri, Giovanni Loris Alborali, Maria Lodovica Pacciarini, Mariagrazia Zanoni, Maria Beatrice Boniotti, G. Sironi, M. Caniatti, Valeria Grieco
Software Mentions: 3
Published: almost 3 years ago

10.1007/s00415-019-09538-z

Apathy as a behavioural marker of cognitive impairment in Parkinson’s disease: a longitudinal analysis
Cited by: 27
Author(s): Glen P. Martin, Kathryn McDonald, David Allsop, Peter J. Diggle, Iracema Leroi
Software Mentions: 3
Published: almost 5 years ago

10.1523/JNEUROSCI.0586-21.2021

RIM-Binding Protein 2 Organizes Ca<sup>2+</sup> Channel Topography and Regulates Release Probability and Vesicle Replenishment at a Fast Central Synapse
Cited by: 12
Author(s): Tanvi Butola, Theocharis Alvanos, Anika Hintze, Peter Koppensteiner, David Kleindienst, Ryuichi Shigemoto, Carolin Wichmann, Tobias Moser
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0244752

Expert opinion as priors for random effects in Bayesian prediction models: Subclinical ketosis in dairy cows as an example
Cited by: 1
Author(s): Haifang Ni, Irene Klugkist, Saskia van der Drift, R. Jorritsma, G.A. Hooijer, M. Nielen
Software Mentions: 3
Published: over 3 years ago

10.1007/s10265-019-01134-6

Population genetic structure and demography of Magnolia kobus: variety borealis is not supported genetically
Cited by: 12
Author(s): Ichiro Tamaki, Naomichi Kawashima, Suzuki Setsuko, Jung-Hyun Lee, Akemi Itaya, Kyohei Yukitoshi, Nobuhiro Tomaru
Software Mentions: 3
Published: about 5 years ago

10.1186/s12874-020-01091-y

Estimating the number of usability problems affecting medical devices: modelling the discovery matrix
Cited by: 2
Author(s): Vincent Vandewalle, Alexandre Caron, Coralie Delettrez, Renaud Périchon, Sylvia Pelayo, Alain Duhamel, B. Dervaux
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0242607

Greater effects of mutual cooperation and defection on subsequent cooperation in direct reciprocity games than generalized reciprocity games: Behavioral experiments and analysis using multilevel models
Cited by: 3
Author(s): Yutaka Horita
Software Mentions: 3
Published: almost 4 years ago

10.1016/j.cognition.2020.104310

The crosslinguistic acquisition of sentence structure: Computational modeling and grammaticality judgments from adult and child speakers of English, Japanese, Hindi, Hebrew and K'iche'
Cited by: 13
Author(s): Ben Ambridge, Ramya Maitreyee, Tomoko Tatsumi, Laura Doherty, Shira Zicherman, Pedro Mateo Pedro, Colin Bannard, Soumitra Samanta, Stewart M. McCauley, Inbal Arnon, Dani Bekman, Amir Efrati, Ruth A. Berman, Bhuvana Narasimhan, Dipti Misra Sharma, Rukmini Bhaya Nair, Kumiko Fukumura, Seth Campbell, Clifton Pye, Sindy Fabiola Can Pixabaj, Mario Marroquín Pelíz, Margarita Julajuj Mendoza
Software Mentions: 3
Published: about 4 years ago

10.3389/fnhum.2019.00442

Distinguishing Social From Private Intentions Through the Passive Observation of Gaze Cues
Cited by: 10
Author(s): Mathis Jording, Denis A. Engemann, Hannah Eckert, Gary Bente, Kai Vogeley
Software Mentions: 3
Published: over 4 years ago

10.1186/s40462-021-00256-8

Identifying resting locations of a small elusive forest carnivore using a two-stage model accounting for GPS measurement error and hidden behavioral states
Cited by: 2
Author(s): Dalton J. Hance, Katie M. Moriarty, Bruce Hollen, Russell W. Perry
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0252227

Methylation patterns at fledging predict delayed dispersal in a cooperatively breeding bird
Cited by: 5
Author(s): Andrea L. Liebl, Jeff S. Wesner, Andrew F. Russell, Aaron W. Schrey
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-018-26313-8

Impact of the griffithsin anti-HIV microbicide and placebo gels on the rectal mucosal proteome and microbiome in non-human primates
Cited by: 26
Author(s): Lauren Girard, Kenzie Birse, Johanna B. Holm, Pawel Gajer, Mike Humphrys, David Garber, Patricia C. Guenthner, Laura Noël‐Romas, Max Abou, Stuart McCorrister, Garrett Westmacott, Lin Wang, Lisa C. Rohan, Nobuyuki Matoba, Janet M. McNicholl, Kenneth E. Palmer, Jacques Ravel, Adam Burgener
Software Mentions: 3
Published: over 6 years ago

10.3389/fpsyg.2018.01138

Education Does Not Affect Cognitive Decline in Aging: A Bayesian Assessment of the Association Between Education and Change in Cognitive Performance
Cited by: 39
Author(s): Rasmus Berggren, Johanna Nilsson, Martin Lövdén
Software Mentions: 3
Published: about 6 years ago

10.1002/ece3.6954

Using community photography to investigate phenology: A case study of coat molt in the mountain goat (<i>Oreamnos americanus</i>) with missing data
Cited by: 11
Author(s): Katarzyna Nowak, Joël Berger, Amy Panikowski, Donald G. Reid, Aerin L. Jacob, Greg Newman, Nicholas E. Young, Jon P. Beckmann, Shane A. Richards
Software Mentions: 2
Published: almost 4 years ago

10.1007/s10646-020-02291-4

A synthesis of patterns of environmental mercury inputs, exposure and effects in New York State
Cited by: 6
Author(s): David C. Evers, Amy K. Sauer, Douglas A. Burns, Nicholas S. Fisher, Diane Bertok, Evan M. Adams, Mark Burton, Charles T. Driscoll
Software Mentions: 2
Published: almost 4 years ago

10.3390/e23010050

A Two-Stage Approach for Bayesian Joint Models of Longitudinal and Survival Data: Correcting Bias with Informative Prior
Cited by: 0
Author(s): Valeria Leiva-Yamaguchi, Danilo Álvares
Software Mentions: 2
Published: over 3 years ago

10.1186/s12940-017-0332-3

Gestational exposure to endocrine disrupting chemicals in relation to infant birth weight: a Bayesian analysis of the HOME Study
Cited by: 70
Author(s): Meghan M. Woods, Bruce P. Lanphear, Joseph M. Braun, Lawrence C. McCandless
Software Mentions: 2
Published: almost 7 years ago

10.1111/eva.13122

Incomplete bioinformatic filtering and inadequate age and growth analysis lead to an incorrect inference of harvested‐induced changes
Cited by: 16
Author(s): Wesley A. Larson, Daniel A. Isermann, Zachary S. Feiner
Software Mentions: 2
Published: about 4 years ago

10.1186/s12874-019-0826-5

A Bayesian non-inferiority approach using experts’ margin elicitation – application to the monitoring of safety events
Cited by: 4
Author(s): Camille Aupiais, Corinne Alberti, Thomas Schmitz, Olivier Baud, Moreno Ursino, Sarah Zohar
Software Mentions: 2
Published: almost 5 years ago

10.14252/foodsafetyfscj.D-20-00007

Attempt of Bayesian Estimation from Left-censored Data Using the Markov Chain Monte Carlo Method: Exploring Cr(VI) Concentrations in Mineral Water Products
Cited by: 3
Author(s): Yoshinari Suzuki, Noriko Tanaka, Hiroshi Akiyama
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pbio.3001391

Cooperating elephants mitigate competition until the stakes get too high
Cited by: 6
Author(s): Li-Li Li, Joshua M. Plotnik, Shangwen Xia, Estelle Meaux, Rui‐Chang Quan
Software Mentions: 2
Published: almost 3 years ago

10.1093/biostatistics/kxx059

Dose-finding designs for cumulative toxicities using multiple constraints
Cited by: 12
Author(s): Shing M. Lee, Moreno Ursino, Ying Kuen Cheung, Sarah Zohar
Software Mentions: 2
Published: almost 7 years ago

10.3389/fpsyg.2021.583209

A Cognitive-Emotional Model to Explain Message Framing Effects: Reducing Meat Consumption
Cited by: 19
Author(s): Valentina Carfora, Massimiliano Pastore, Patrizia Catellani
Software Mentions: 2
Published: over 3 years ago

10.1093/genetics/iyaa048

Additive genetic variance and covariance between relatives in synthetic wheat crosses with variable parental ploidy levels
Cited by: 0
Author(s): Laura Puhl, J. Crossa, S. Munilla, Paulino Pérez‐Rodríguez, Rodolfo Juan Carlos Cantet
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pntd.0008640

Leveraging multiple data types to estimate the size of the Zika epidemic in the Americas
Cited by: 19
Author(s): Sean M. Moore, Rachel J. Oidtman, Kenji Soda, Amir Siraj, Robert C. Reiner, Christopher M. Barker, T. Alex Perkins
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pntd.0006888

Visceral leishmaniasis: Spatiotemporal heterogeneity and drivers underlying the hotspots in Muzaffarpur, Bihar, India
Cited by: 23
Author(s): Caroline A. Bulstra, Epke A. Le Rutte, Paritosh Malaviya, Epco Hasker, Luc E. Coffeng, Albert Picado, Om Prakash Singh, Marleen Boelaert, Sake J. de Vlas
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pntd.0008868

Linking mosquito surveillance to dengue fever through Bayesian mechanistic modeling
Cited by: 7
Author(s): Clinton B. Leach, Jennifer A. Hoeting, Kim M. Pepin, Álvaro Eduardo Eiras, Mevin B. Hooten, Colleen T. Webb
Software Mentions: 2
Published: almost 4 years ago

10.1098/rspb.2020.3202

Quantifying pyrodiversity and its drivers
Cited by: 14
Author(s): Zachary L. Steel, Brandon M. Collins, David B. Sapsis, Scott L. Stephens
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0211138

Leave or stay? Video-logger revealed foraging efficiency of humpback whales under temporal change in prey density
Cited by: 9
Author(s): Yu Akiyama, Tomonari Akamatsu, Marianne H. Rasmussen, Maria Iversen, Tadahisa Iwata, Yusuke Goto, Kosuke Aoki, Katsufumi Sato
Software Mentions: 2
Published: over 5 years ago

10.1098/rsos.201159

Reducing variance or helping the poorest? A mouse tracking approach to investigate cognitive bases of inequality aversion in resource allocation
Cited by: 1
Author(s): Atsushi Ueshima, Tatsuya Kameda
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0126961

Quantifying Geographic Variation in the Climatic Drivers of Midcontinent Wetlands with a Spatially Varying Coefficient Model
Cited by: 2
Author(s): Christian Roy
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-020-65017-w

Potential sex-dependent effects of weather on apparent survival of a high-elevation specialist
Cited by: 13
Author(s): Eliseo Strinella, Davide Scridel, Mattia Brambilla, Christian Schano, Fränzi Korner‐Nievergelt
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-020-73472-8

A new data-driven mathematical model dissociates attractiveness from sexual dimorphism of human faces
Cited by: 9
Author(s): Koyo Nakamura, Katsumi Watanabe
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0221707

Quantitative measures of corneal transparency, derived from objective analysis of depth-resolved corneal images, demonstrated with full-field optical coherence tomographic microscopy
Cited by: 13
Author(s): Romain Bocheux, Pascal Pernot, Vincent Borderie, Karsten Plamann, Kristina Irsch
Software Mentions: 2
Published: about 5 years ago

10.1007/s13280-019-01233-7

Did the movie Finding Dory increase demand for blue tang fish?
Cited by: 14
Author(s): Diogo Veríssimo, Sean C. Anderson, Michael F. Tlusty
Software Mentions: 2
Published: about 5 years ago

10.1016/S2666-5247(20)30200-7

Insight into the practical performance of RT-PCR testing for SARS-CoV-2 using serological data: a cohort study
Cited by: 62
Author(s): Zhen Zhang, Qifang Bi, Shisong Fang, Lan Wei, Xin Wang, Jianfan He, Yongsheng Wu, Xiaojian Liu, Wei Gao, Renli Zhang, Wenfeng Gong, Qiru Su, Andrew S. Azman, Justin Lessler, Xuan Zou
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.67018

Physiology and ecology combine to determine host and vector importance for Ross River virus
Cited by: 7
Author(s): Morgan P. Kain, Eloise B Skinner, Andrew F. van den Hurk, Hamish McCallum, Erin A. Mordecai
Software Mentions: 2
Published: about 3 years ago

10.7554/eLife.29144

A minimally sufficient model for rib proximal-distal patterning based on genetic analysis and agent-based simulations
Cited by: 6
Author(s): Jennifer L. Fogel, Daniel L. Lakeland, In Kyoung Mah, Francesca V. Mariani
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0234072

Use of a mechanistic growth model in evaluating post-restoration habitat quality for juvenile salmonids
Cited by: 2
Author(s): Carlos M. Polivka, Joseph R. Mihaljevic, Greg Dwyer
Software Mentions: 2
Published: about 4 years ago

10.1038/s42003-020-01537-5

Controllability over stressor decreases responses in key threat-related brain areas
Cited by: 27
Author(s): Chirag Limbachia, Kelly A. Morrow, Anastasiia Khibovska, Christian Meyer, Srikanth Padmala, Luiz Pessoa
Software Mentions: 2
Published: over 3 years ago

10.1186/s12884-016-0871-6

Risk factors for vaginal fistula symptoms in Sub-Saharan Africa: a pooled analysis of national household survey data
Cited by: 30
Author(s): Mathieu Maheu‐Giroux, Véronique Filippi, Nathalie Maulet, Sékou Samadoulougou, Márcia C. Castro, Nicolas Méda, Mariève Pouliot, Fati Kirakoya‐Samadoulougou
Software Mentions: 2
Published: over 8 years ago

10.1186/s12889-017-4586-z

Long-term effectiveness of mailed nicotine replacement therapy: study protocol of a randomized controlled trial 5-year follow-up
Cited by: 5
Author(s): Vladyslav Kushnir, Peter Selby, Laurie Zawertailo, Rachel F. Tyndale, Scott T. Leatherdale, John A. Cunningham
Software Mentions: 2
Published: about 7 years ago

10.1002/ece3.7885

Plant‐eating carnivores: Multispecies analysis on factors influencing the frequency of plant occurrence in obligate carnivores
Cited by: 5
Author(s): Hiroto Yoshimura, Satoshi Hirata, Kodzue Kinoshita
Software Mentions: 2
Published: about 3 years ago

10.1002/ece3.1985

Birth dates vary with fixed and dynamic maternal features, offspring sex, and extreme climatic events in a high‐latitude marine mammal
Cited by: 17
Author(s): Jay J. Rotella, J. Terrill Paterson, Robert A. Garrott
Software Mentions: 2
Published: over 8 years ago

10.1186/s12874-016-0107-5

Meta-analytic estimation of measurement variability and assessment of its impact on decision-making: the case of perioperative haemoglobin concentration monitoring
Cited by: 5
Author(s): Emmanuel Charpentier, Vincent Looten, B. Fahlgren, Alexandre Barna, Loı̈c Guillevin
Software Mentions: 2
Published: over 8 years ago

10.1186/s13071-018-2623-0

Multiflora rose invasion amplifies prevalence of Lyme disease pathogen, but not necessarily Lyme disease risk
Cited by: 22
Author(s): Solny A. Adalsteinsson, W. Gregory Shriver, Andrias Hojgaard, Jacob L. Bowman, Dustin Brisson, Vincent D’Amico, Jeffrey J. Buler
Software Mentions: 2
Published: over 6 years ago

10.2807/1560-7917.ES.2019.24.42.1900588

Spatial variability in the reproduction number of Ebola virus disease, Democratic Republic of the Congo, January–September 2019
Cited by: 9
Author(s): Kenji Mizumoto, Amna Tariq, Kimberlyn Roosa, Jun Kong, Ping Yan, Gerardo Chowell
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12981-018-0198-7

Risk factors and outcomes for the Q151M and T69 insertion HIV-1 resistance mutations in historic UK data
Cited by: 3
Author(s): Oliver Stirrup, David Dunn, Anna Tostevin, Caroline Sabin, Anton Pozniak, David Asboe, Anna L. Cox, Chloe Orkin, Fabiola Martin, Patricia A. Cane
Software Mentions: 1
Published: over 6 years ago

10.18632/aging.103687

Risk of death by age and gender from CoVID-19 in Peru, March-May, 2020
Cited by: 44
Author(s): César V. Munayco, Gerardo Chowell, Amna Tariq, Eduardo A. Undurraga, Kenji Mizumoto
Software Mentions: 1
Published: about 4 years ago

10.1093/aje/kwaa224

Joint Modeling of Individual Trajectories, Within-Individual Variability, and a Later Outcome: Systolic Blood Pressure Through Childhood and Left Ventricular Mass in Early Adulthood
Cited by: 3
Author(s): Richard M A Parker, George Leckie, Harvey Goldstein, Laura D Howe, Jon Heron, Alun D. Hughes, David Phillippo, Kate Tilling
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12916-020-01691-x

Early epidemiological assessment of the transmission potential and virulence of coronavirus disease 2019 (COVID-19) in Wuhan City, China, January–February, 2020
Cited by: 41
Author(s): Kenji Mizumoto, Katsushi Kagaya, Gerardo Chowell
Software Mentions: 1
Published: about 4 years ago

10.1186/s12874-021-01384-w

A Bayesian latent class mixture model with censoring for correlation analysis in antimicrobial resistance across populations
Cited by: 1
Author(s): Min Zhang, Chong Wang, Annette M. O’Connor
Software Mentions: 1
Published: almost 3 years ago

10.1186/s12874-017-0376-7

A random effects meta-analysis model with Box-Cox transformation
Cited by: 9
Author(s): Yusuke Yamaguchi, Kazushi Maruo, Christopher Partlett, Richard D Riley
Software Mentions: 1
Published: about 7 years ago

10.1186/s12886-017-0597-x

What does IGRA testing add to the diagnosis of ocular tuberculosis? A Bayesian latent class analysis
Cited by: 19
Author(s): Rupesh Agrawal, Robert Grant, Bhaskar Gupta, Dinesh Visva Gunasekeran, J.J. González‐López, Peter Addison, Mark Westcott, Carlos Pavésio
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12889-021-11178-w

Rhinovirus prevalence as indicator for efficacy of measures against SARS-CoV-2
Cited by: 12
Author(s): Simo Kitanovski, Gibran Horemheb-Rubio, Ortwin Adams, Барбара Гартнер, Thomas Lengauer, Daniel Hoffmann, Rolf Kaiser
Software Mentions: 1
Published: about 3 years ago

10.3390/biom10071069

The Droserasin 1 PSI: A Membrane-Interacting Antimicrobial Peptide from the Carnivorous Plant Drosera capensis
Cited by: 4
Author(s): Marc A. Sprague-Piercy, Jan C. Bierma, Marquise G. Crosby, Brooke P. Carpenter, Gemma R. Takahashi, Joana Paulino, Ivan Hung, Rongfu Zhang, John Kelly, Natalia Kozlyuk, Xi Chen, Carter T. Butts, Rachel W. Martin
Software Mentions: 1
Published: about 4 years ago

10.1007/s00429-020-02205-4

Role of dopamine and gray matter density in aging effects and individual differences of functional connectomes
Cited by: 7
Author(s): Benjamín Garzón, Martin Lövdén, Lieke de Boer, Jan Axelsson, Katrine Riklund, Lars Bäckman, Lars Nyberg, Marc Guitart-Masip
Software Mentions: 1
Published: over 3 years ago

10.1002/psp4.12428

Development of a Parsimonious Design for Optimal Classification of Exclusive Breastfeeding
Cited by: 5
Author(s): Zheng Liu, Aly Diana, Christine Slater, Thomas C. Preston, Rosalind S. Gibson, Lisa A Houghton, Stephen B. Duffull
Software Mentions: 1
Published: about 5 years ago

10.1016/S2468-2667(21)00142-0

Trends in undiagnosed HIV prevalence in England and implications for eliminating HIV transmission by 2030: an evidence synthesis model
Cited by: 9
Author(s): Anne M. Presanis, Ross Harris, Peter Kirwan, Ada Miltz, Sara Croxford, Ellen Heinsbroek, Christopher Jackson, Hamish Mohammed, Alison E Brown, Valerie Delpech, O N Gill, Daniela De Angelis
Software Mentions: 1
Published: almost 3 years ago

10.26508/lsa.202000911

Chromosome instability induced by a single defined sister chromatid fusion
Cited by: 3
Author(s): Katsushi Kagaya, Naoto Noma-Takayasu, Io Yamamoto, Sanki Tashiro, Fuyuki Ishikawa, Makoto Hayashi
Software Mentions: 1
Published: almost 4 years ago

10.1097/MD.0000000000022154

Bayesian analysis of the association between effective strategies of multimodal nonpharmacological intervention and characteristics of cognitive function in nursing home residents with cognitive impairment
Cited by: 2
Author(s): Kyosuke Yorozuya, Shingo Yamane, Misako Nobuhisa, Hiroko Owaki, Takeaki Suzuki, Hikaru Okahara, Wataru Iwamori, Hideaki Hanaoka
Software Mentions: 1
Published: about 4 years ago

10.3390/v13061155

Bayesian Binary Mixture Models as a Flexible Alternative to Cut-Off Analysis of ELISA Results, a Case Study of Seoul Orthohantavirus
Cited by: 4
Author(s): Arno Swart, Miriam Maas, Ankje de Vries, Tryntsje Cuperus, Marieke Opsteegh
Software Mentions: 1
Published: about 3 years ago

10.7717/peerj.11032

Incorporation of feeding functional group information informs explanatory patterns of long-term population changes in fish assemblages
Cited by: 2
Author(s): Jason C. Doll, Stephen J. Jacquemin
Software Mentions: 1
Published: over 3 years ago

10.7717/peerj.5417

Local and population-level responses of Greater sage-grouse to oil and gas development and climatic variation in Wyoming
Cited by: 1
Author(s): Rob Roy Ramey, Joe Thorley, Alexander S. Ivey
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1008812

Estimating incidence of infection from diverse data sources: Zika virus in Puerto Rico, 2016
Cited by: 2
Author(s): Talía M. Quandelacy, Jessica M. Healy, Bradford Greening, Dania M. Rodríguez, Koo‐Whang Chung, Matthew J. Kuehnert, Brad J. Biggerstaff, Emilio Dirlikov, Luis Mier-y-Terán-Romero, Tyler M. Sharp, Stephen H. Waterman, Michael A. Johansson
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pgen.1004102

Comprehensive Functional Annotation of 77 Prostate Cancer Risk Loci
Cited by: 167
Author(s): Dennis J. Hazelett, Suhn Kyong Rhie, Malaina Gaddis, Chunli Yan, Daniel L. Lakeland, Simon Coetzee, Brian E. Henderson, Houtan Noushmehr, Wendy Cozen, Zsofia Kóte-Jarai, Rosalind Eeles, Douglas F. Easton, Christopher A. Haiman, Wange Lu, Peggy J. Farnham, Gerhard A. Coetzee
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0206078

Time wears on: Assessing how bone wears using 3D surface texture analysis
Cited by: 37
Author(s): Naomi L. Martisius, Isabelle Sidéra, Mark N. Grote, Teresa E. Steele, Shannon P. McPherron, Ellen Schulz‐Kornas
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0218375

Multivariate temporal modeling of crime with dynamic linear models
Cited by: 2
Author(s): Nathaniel Garton, Jarad Niemi
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0206985

Time and frequency dependent changes in resting state EEG functional connectivity following lipopolysaccharide challenge in rats
Cited by: 16
Author(s): Matthew A. Albrecht, Chloe N. Vaughn, Molly Erickson, Sarah M. Clark, Leonardo H. Tonelli
Software Mentions: 1
Published: almost 6 years ago

10.1007/s13524-020-00889-1

A Bayesian Reconstruction of a Historical Population in Finland, 1647–1850
Cited by: 8
Author(s): Miikka Voutilainen, Jouni Helske, Harri Högmander
Software Mentions: 1
Published: over 4 years ago

Projects: cran: rstan

Papers Mentioning rstan 133