cran: rpart | Projects | Ecosyste.ms: Papers

10.1186/1471-2105-9-88

Comparison of normalisation methods for surface-enhanced laser desorption and ionisation (SELDI) time-of-flight (TOF) mass spectrometry data
Cited by: 43
Author(s): Wouter Meuleman, Judith Y. M. N. Engwegen, Marie-Christine W. Gast, Jos H. Beijnen, Marcel J. T. Reinders, Lodewyk Wessels
Software Mentions: 5
Published: almost 17 years ago

10.1371/journal.ppat.1009101

RV144 HIV-1 vaccination impacts post-infection antibody responses
Cited by: 12
Author(s): Thembi Mdluli, Ningbo Jian, Bonnie M. Slike, Dominic Paquin‐Proulx, G. Donofrio, Aljawharah Alrubayyi, Syna Kuriakose Gift, Rebecca Grande, Mary Bryson, Anna Lee, Vincent Dussupt, Letzibeth Mendez-Riveria, Eric Sanders‐Buell, Agnès‐Laurence Chenine, Ursula Tran, Yifan Li, Eric N. Brown, Paul T. Edlefsen, Robert J. O’Connell, Peter B. Gilbert, Sorachai Nitayaphan, Punnee Pitisuttihum, Supachai Rerks-Ngarm, Merlin L. Robb, Robert A. Gramzinski, Galit Alter, Sodsai Tovanabutra, Ivelin S. Georgiev, Margaret E. Ackerman, Victoria R. Polonis, Sandhya Vasan, Nelson L. Michael, Jerome H. Kim, Michael A. Eller, Shelly J. Krebs, Morgane Rolland
Software Mentions: 5
Published: almost 4 years ago

10.18632/aging.103980

A predictive model for the severity of COVID-19 in elderly patients
Cited by: 16
Author(s): Furong Zeng, Guangtong Deng, Yanhui Cui, Yan Zhang, Minhui Dai, Lingli Chen, Duoduo Han, Wen Li, Kehua Guo, Xiang Chen, Min Shen, Pinhua Pan
Software Mentions: 5
Published: almost 4 years ago

10.3390/healthcare9060710

The Prediction Model of Medical Expenditure Appling Machine Learning Algorithm in CABG Patients
Cited by: 4
Author(s): Yen-Chun Huang, Shao‐Jung Li, Mingchih Chen, Tian–Shyug Lee
Software Mentions: 5
Published: over 3 years ago

10.1155/2021/5579373

A Diagnostic Analysis Workflow to Optimal Multiple Tumor Markers to Predict the Nonmetastatic Breast Cancer from Breast Lumps
Cited by: 0
Author(s): Nan Jiang, Tian Tian, Xianyang Chen, Zhang Guo-fen, Longfa Pan, Chengping Yan, Guangdie Yang, Lili Wang, Xuchen Cao, Xin Wang
Software Mentions: 5
Published: over 3 years ago

10.1186/gb-2012-13-10-r95

Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers
Cited by: 60
Author(s): Anneleen Decock, Maté Ongenaert, Jasmien Hoebeeck, Katleen De Preter, Gert Van Peer, Wim Van Criekinge, Ruth Ladenstein, Johannes H. Schulte, Rosa Noguera, Raymond Stallings, An Van Damme, Geneviève Laureys, Joëlle Vermeulen, Tom Van Maerken, Frank Speleman, Jo Vandesompele
Software Mentions: 5
Published: almost 13 years ago

10.1155/2021/6633442

The Construction and Comprehensive Analysis of Inflammation-Related ceRNA Networks and Tissue-Infiltrating Immune Cells in Ulcerative Colitis Progression
Cited by: 8
Author(s): Jiawei Lu, Aimaier Rouzigu, Li-Hong Teng, Weili Liu
Software Mentions: 5
Published: over 3 years ago

10.1002/advs.201801254

Detection of CTC Clusters and a Dedifferentiated RNA‐Expression Survival Signature in Prostate Cancer
Cited by: 28
Author(s): Molly Kozminsky, Shamileh Fouladdel, Jin Hoon Chung, Yugang Wang, David C. Smith, Ajjai Alva, Ebrahim Azizi, Todd M. Morgan, Sunitha Nagrath
Software Mentions: 5
Published: almost 6 years ago

10.18632/oncotarget.13065

Mutations or copy number losses of <i>CD58</i> and <i>TP53</i> genes in diffuse large B cell lymphoma are independent unfavorable prognostic factors
Cited by: 37
Author(s): Yang Cao, Tao Zhu, Peiling Zhang, Min Xiao, Shuhua Yi, Yan Yang, Qinlu Li, Shaopin g Ling, Yafei Wang, Lili Gao, Li Zhu, Jue Wang, Na Wang, Liang Huang, Peihong Zhang, Qiong-Li Zhai, Lugui Qiu, Jianfeng Zhou
Software Mentions: 5
Published: about 8 years ago

10.1002/bimj.201100251

Regression trees for predicting mortality in patients with cardiovascular disease: What improvement is achieved by using ensemble‐based methods?
Cited by: 58
Author(s): Peter C. Austin, Douglas S. Lee, Ewout W. Steyerberg, Jack V. Tu
Software Mentions: 5
Published: over 12 years ago

10.1093/biostatistics/kxx012

Computational health economics for identification of unprofitable health care enrollees
Cited by: 16
Author(s): Sherri Rose, Savannah Bergquist, Timothy J. Layton
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0160588

Fidelity of Automatic Speech Processing for Adult and Child Talker Classifications
Cited by: 26
Author(s): Mark VanDam, Noah H. Silbert
Software Mentions: 5
Published: about 8 years ago

10.4269/ajtmh.19-0968

Use of Typhoid Vi-Polysaccharide Vaccine as a Vaccine Probe to Delineate Clinical Criteria for Typhoid Fever
Cited by: 0
Author(s): Tarikul Islam, Justin Im, Faisal Ahmmed, Deok Ryun Kim, Ashraful Islam Khan, Khalequ Zaman, Mohammad Ali, Florian Marks, Firdausi Qadri, Jerome H. Kim, John D. Clemens
Software Mentions: 5
Published: over 4 years ago

10.1038/s41598-020-57968-x

Prognostic Nomogram For Locoregionally Advanced Nasopharyngeal Carcinoma
Cited by: 15
Author(s): Yanming Jiang, Song Qu, Xin-Bin Pan, Shan Huang, Xiaodong Zhu
Software Mentions: 5
Published: almost 5 years ago

10.1038/s41398-020-00898-z

Multi-domain potential biomarkers for post-traumatic stress disorder (PTSD) severity in recent trauma survivors
Cited by: 29
Author(s): Ziv Ben‐Zion, Yoav Zeevi, Nimrod Jackob Keynan, Roee Admon, Tal Kozlovski, Haggai Sharon, Pinchas Halpern, Israel Liberzon, Arieh Y. Shalev, Yoav Benjamini, Talma Hendler
Software Mentions: 4
Published: over 4 years ago

10.7150/thno.46123

Improved cardiovascular risk prediction in patients with end-stage renal disease on hemodialysis using machine learning modeling and circulating microribonucleic acids
Cited by: 15
Author(s): David de Gonzalo-Calvo, Pablo Martínez–Camblor, Christian Bär, Kévin Duarte, Nicolas Girerd, Bengt Fellström, Roland E. Schmieder, Alan G. Jardine, Ziad A. Massy, Hallvard Holdaas, Patrick Rossignol, Faı̈ez Zannad, Thomas Thum
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12889-021-11829-y

Comparison of machine learning algorithms applied to symptoms to determine infectious causes of death in children: national survey of 18,000 verbal autopsies in the Million Death Study in India
Cited by: 2
Author(s): Susan Idicula‐Thomas, Ulka Gawde, Prabhat Jha
Software Mentions: 4
Published: about 3 years ago

10.1186/s12885-020-07058-y

Immune landscape of human prostate cancer: immune evasion mechanisms and biomarkers for personalized immunotherapy
Cited by: 25
Author(s): Mayassa J. Bou‐Dargham, Linlin Sha, Qing‐Xiang Amy Sang, Jinfeng Zhang
Software Mentions: 4
Published: over 4 years ago

10.3390/s19194342

Prediction of Motor Failure Time Using An Artificial Neural Network
Cited by: 39
Author(s): Gustavo Scalabrini Sampaio, Arnaldo Rabello de Aguiar Vallim Filho, Leilton Santos da Silva, Leandro Augusto da Silva
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2017.02223

Modeling Effects of Temperature, Soil, Moisture, Nutrition and Variety As Determinants of Severity of Pythium Damping-Off and Root Disease in Subterranean Clover
Cited by: 17
Author(s): Ming Pei You, Kelly Rensing, Michael Renton, Martin J. Barbetti
Software Mentions: 4
Published: almost 7 years ago

10.1038/s41598-020-79527-0

Understanding adherence to the recording of ecological momentary assessments in the example of tinnitus monitoring
Cited by: 14
Author(s): Miro Schleicher, Vishnu Unnikrishnan, Patrick Neff, Jorge Simões, Thomas Probst, Rüdiger Pryss, Winfried Schlee, Myra Spiliopoulou
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0119276

Effect of Landscape Pattern on Insect Species Density within Urban Green Spaces in Beijing, China
Cited by: 20
Author(s): Zhimin Su, Xiaoma Li, Weiqi Zhou, Zhiyun Ouyang
Software Mentions: 4
Published: over 9 years ago

10.1186/s12911-020-01180-4

Application of data mining for predicting hemodynamics instability during pheochromocytoma surgery
Cited by: 8
Author(s): Yating Zhao, Fang Li, Lei Cui, Song Bai
Software Mentions: 4
Published: over 4 years ago

10.3389/fimmu.2021.695806

An Unbiased Machine Learning Exploration Reveals Gene Sets Predictive of Allograft Tolerance After Kidney Transplantation
Cited by: 7
Author(s): Qiang Fu, Divyansh Agarwal, Kevin Deng, Rudy Matheson, Hongji Yang, Wei Liang, Ran Qing, Shaoping Deng, James F. Markmann
Software Mentions: 4
Published: over 3 years ago

10.3390/vaccines9040315

Reasons for Taking the COVID-19 Vaccine by US Social Media Users
Cited by: 52
Author(s): Arriel Benis, Abraham Seidmann, Shai Ashkenazi
Software Mentions: 4
Published: over 3 years ago

10.1002/advs.202000486

Machine Learning‐Assisted Evaluation of Circulating DNA Quantitative Analysis for Cancer Screening
Cited by: 17
Author(s): Rita Tanos, Guillaume Tosato, Amaëlle Otandault, Zahra Al Amir Dache, Laurence Lasorsa, Geoffroy Tousch, Safia El Messaoudi, Romain Meddeb, Mona Diab Assaf, Marc Ychou, Stanislas du Manoir, Denis Pezet, Johan Gagnière, Pierre Colombo, William Jacot, Eric Assénat, Marie Dupuy, Antoine Adenis, Thibault Mazard, Caroline Mollévi, José María Sayagués, Jacques Colinge, Alain R. Thierry
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-017-10558-w

Development and validation of a multivariate predictive model for rheumatoid arthritis mortality using a machine learning approach
Cited by: 45
Author(s): José M. Lezcano-Valverde, Fernando Salazar, Leticia León, Esther Toledano, Juan A. Jover, Eduardo Soudah, Isidoro González‐Álvaro, Lydia Abásolo, Luis Rodríguez‐Rodríguez
Software Mentions: 4
Published: about 7 years ago

10.1038/srep18948

Scalable topographies to support proliferation and Oct4 expression by human induced pluripotent stem cells
Cited by: 55
Author(s): Andreas S. Reimer, Aliaksei Vasilevich, Frits Hulshof, Priyalakshmi Viswanathan, Clemens A. van Blitterswijk, Jan de Boer, Fiona M. Watt
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pone.0093950

A Comparison of Supervised Classification Methods for the Prediction of Substrate Type Using Multibeam Acoustic and Legacy Grain-Size Data
Cited by: 125
Author(s): David Stephens, Markus Diesing
Software Mentions: 4
Published: over 10 years ago

10.3390/proteomes9020028

Advanced Fiber Type-Specific Protein Profiles Derived from Adult Murine Skeletal Muscle
Cited by: 10
Author(s): Britta Eggers, Karin Schork, Michael Turewicz, Katalin Barkovits, Martin Eisenacher, Rolf Schröder, Christoph S. Clemen, Katrin Marcus
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0117844

Large Unbalanced Credit Scoring Using Lasso-Logistic Regression Ensemble
Cited by: 61
Author(s): Wang Hong, Qingsong Xu, Lifeng Zhou
Software Mentions: 4
Published: over 9 years ago

10.1111/1574-6941.12362

Bacterial community structure and soil properties of a subarctic tundra soil in Council, Alaska
Cited by: 100
Author(s): Hye Min Kim, Jae Chang Jung, Étienne Yergeau, Chung Yeon Hwang, L. D. Hinzman, Sang Heon Nam, Soon Gyu Hong, Ok-Sun Kim, Jongsik Chun, Yoo Kyung Lee
Software Mentions: 4
Published: over 10 years ago

10.1186/1471-2105-11-594

Addressing the Challenge of Defining Valid Proteomic Biomarkers and Classifiers
Cited by: 109
Author(s): Mohammed Dakna, Kate Harris, Alexandros Kalousis, Sébastien Carpentier, Walter Kölch, Joost P. Schanstra, Marion Haubitz, Antonia Vlahou, Harald Mischak, Mark Girolami
Software Mentions: 4
Published: almost 14 years ago

10.1371/journal.pone.0198797

Clinical diagnosis of partial or complete anterior cruciate ligament tears using patients' history elements and physical examination tests
Cited by: 19
Author(s): Simon Décary, Michel Fallaha, Sylvain Belzile, Johanne Martel‐Pelletier, Jean‐Pierre Pelletier, Debbie Feldman, Marie‐Pierre Sylvestre, Pascal‐André Vendittoli, François Desmeules
Software Mentions: 4
Published: over 6 years ago

10.3390/e23070882

Assessment and Prediction of Water Resources Vulnerability Based on a NRS-RF Model: A Case Study of the Song-Liao River Basin, China
Cited by: 4
Author(s): Weizhong Chen, Yan Chen, Yazhong Feng
Software Mentions: 4
Published: over 3 years ago

10.1017/cts.2020.513

Lessons and tips for designing a machine learning study using EHR data
Cited by: 14
Author(s): Jaron Arbet, Cole Brokamp, Jareen Meinzen‐Derr, Katy E. Trinkley, Heidi Spratt
Software Mentions: 4
Published: over 4 years ago

10.1186/1471-2164-11-348

Genome-wide identification of new Wnt/β-catenin target genes in the human genome using CART method
Cited by: 48
Author(s): Christian Hödar, Rodrigo Assar, Marcela Colombres, Andrés Aravena, Leonardo Pavéz, Maurício González, Servet Martı́nez, Nibaldo C. Inestrosa, Alejandro Maass
Software Mentions: 4
Published: almost 15 years ago

10.18632/oncotarget.25669

A diagnostic autoantibody signature for primary cutaneous melanoma
Cited by: 26
Author(s): Pauline Zaenker, Johnny Lo, Robert Pearce, Phillip Cantwell, Lester Cowell, Mark Lee, Christopher J Quirk, Henry C.-H. Law, Elin S. Gray, Mel Ziman
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0235361

Expressing uncertainty in Human-Robot interaction
Cited by: 2
Author(s): Christoph Bartneck, Elena Moltchanova
Software Mentions: 4
Published: over 4 years ago

10.3389/fimmu.2021.676980

Integrative Multi-Omics Reveals Serum Markers of Tuberculosis in Advanced HIV
Cited by: 9
Author(s): Sonya Krishnan, Artur T. L. Queiroz, Amita Gupta, Nikhil Gupte, Gregory P. Bisson, Johnstone Kumwenda, Kogieleum Naidoo, Lerato Mohapi, Vidya Mave, Rosie Mngqibisa, Javier R. Lama, Mina C. Hosseinipour, Bruno B. Andrade, Petros C. Karakousis
Software Mentions: 4
Published: over 3 years ago

10.1186/s12968-017-0387-x

A novel multiparametric imaging approach to acute myocarditis using T2-mapping and CMR feature tracking
Cited by: 30
Author(s): Bettina Baeßler, Melanie Treutlein, Frank Schaarschmidt, Christian Stehning, Bernhard Schnackenburg, Guido Michels, David Maintz, Alexander C. Bunck
Software Mentions: 4
Published: about 7 years ago

10.2196/25977

Social Media Engagement and Influenza Vaccination During the COVID-19 Pandemic: Cross-sectional Survey Study
Cited by: 39
Author(s): Arriel Benis, Anna Khodos, Sivan Ran, Eugene Levner, Shai Ashkenazi
Software Mentions: 4
Published: over 3 years ago

10.3390/genes10100807

D-GPM: A Deep Learning Method for Gene Promoter Methylation Inference
Cited by: 11
Author(s): Xingxin Pan, Biao Liu, Xingzhao Wen, Yulu Liu, Xiuqing Zhang, Shengbin Li, Shuai Cheng Li
Software Mentions: 4
Published: about 5 years ago

10.1186/s13030-020-00199-3

Association between polypharmacy and the persistence of delirium: a retrospective cohort study
Cited by: 6
Author(s): Ken Kurisu, Daisuke Miyabe, Yoshiko Furukawa, Osamu Shibayama, Kazuhiro Yoshiuchi
Software Mentions: 4
Published: about 4 years ago

10.1038/hortres.2016.2

A next-generation marker genotyping platform (AmpSeq) in heterozygous crops: a case study for marker-assisted selection in grapevine
Cited by: 66
Author(s): Shanshan Yang, Jonathan Fresnedo-Ramírez, Minghui Wang, Linda M. Cote, Peter A. Schweitzer, Paola Barba, Elizabeth M. Takacs, Matthew D. Clark, James J. Luby, David C. Manns, Gavin L. Sacks, Anna Katharine Mansfield, Jason P. Londo, Anne Fennell, David M. Gadoury, Bruce I. Reisch, Lance Cadle‐Davidson, Qi Sun
Software Mentions: 4
Published: over 8 years ago

10.1186/1471-2105-11-37

Predicting Bevirimat resistance of HIV-1 from genotype
Cited by: 32
Author(s): Dominik Heider, Jens Verheyen, Daniel Hoffmann
Software Mentions: 4
Published: almost 15 years ago

10.1371/journal.pone.0159888

Prognostic Impact of Time to Ipsilateral Breast Tumor Recurrence after Breast Conserving Surgery
Cited by: 14
Author(s): Marie Gosset, Anne-Sophie Hamy, Peter Mallon, M Deloménie, D. Mouttet, Jean‐Yves Pierga, Marick Laé, A. Fourquet, Roman Rouzier, Fabien Reyal, Jean-Guillaume Féron
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0062439

Novel Algorithm for Non-Invasive Assessment of Fibrosis in NAFLD
Cited by: 50
Author(s): Jan-Peter Sowa, Dominik Heider, Lars P. Bechmann, Guido Gerken, Daniel Hoffmann, Ali Canbay
Software Mentions: 4
Published: over 11 years ago

10.1371/journal.pone.0251272

Survival prediction based on the gene expression associated with cancer morphology and microenvironment in primary central nervous system lymphoma
Cited by: 4
Author(s): Yasuo Takashima, Atsushı Kawaguchi, Junya Fukai, Yasuo Iwadate, Koji Kajiwara, Hiroaki Hondoh
Software Mentions: 4
Published: over 3 years ago

10.1534/g3.115.017533

Genome-Wide Association Study Based on Multiple Imputation with Low-Depth Sequencing Data: Application to Biofuel Traits in Reed Canarygrass
Cited by: 9
Author(s): Guillaume P. Ramstein, Alexander E. Lipka, Fei Lü, Denise E. Costich, J. H. Cherney, Edward S. Buckler, Michael D. Casler
Software Mentions: 4
Published: over 9 years ago

10.3758/s13428-020-01360-0

Multiple moderator meta-analysis using the R-package Meta-CART
Cited by: 16
Author(s): Xinru Li, Elise Dusseldorp, Xiaogang Su, Jacqueline J. Meulman
Software Mentions: 4
Published: over 4 years ago

10.3758/s13428-017-0987-2

PredPsych: A toolbox for predictive machine learning-based approach in experimental psychology research
Cited by: 27
Author(s): Atesh Koul, Cristina Becchio, Andrea Cavallo
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0240604

Discrimination of wear and non-wear in infants using data from hip- and ankle-worn devices
Cited by: 0
Author(s): Samuel R. LaMunion, Scott E. Crouter, Nicholas T. Broskey, Abby D. Altazan, Leanne M. Redman
Software Mentions: 4
Published: about 4 years ago

10.3389/fonc.2020.01638

Establishment of Decision Rules and Risk Assessment Model for Preoperative Prediction of Lymph Node Metastasis in Gastric Cancer
Cited by: 9
Author(s): Chao Huang, Cegui Hu, Jinfeng Zhu, Wenjun Zhang, Jun Huang, Zhengming Zhu
Software Mentions: 4
Published: about 4 years ago

10.3389/fonc.2020.604266

Prediction of Pathological Upgrading at Radical Prostatectomy in Prostate Cancer Eligible for Active Surveillance: A Texture Features and Machine Learning-Based Analysis of Apparent Diffusion Coefficient Maps
Cited by: 10
Author(s): Jinke Xie, Basen Li, Xiangde Min, Peipei Zhang, Chanyuan Fan, Qiubai Li, Liang Wang
Software Mentions: 4
Published: almost 4 years ago

10.3390/ijerph18115922

Identification of Explanatory Variables in Possession of the Ball in High-Performance Women’s Football
Cited by: 5
Author(s): Rubén Maneiro, José Luís Losada, Claudio A. Casal, Antonio Ardá
Software Mentions: 4
Published: over 3 years ago

10.1186/1471-2105-12-390

Classification of microarrays; synergistic effects between normalization, gene selection and machine learning
Cited by: 28
Author(s): Jenny Önskog, Eva Freyhult, Mattias Landfors, Patrik Rydén, Torgeir R. Hvidsten
Software Mentions: 4
Published: about 13 years ago

10.3389/fpls.2018.01129

Carbon Gain Limitation Is the Primary Mechanism for the Elevational Distribution Limit of Myriophyllum in the High-Altitude Plateau
Cited by: 1
Author(s): Dong Xie, Zhigang Wu, Han Y. H. Chen, Wang Zhong, Qiang Wang, Dan Yu
Software Mentions: 4
Published: over 6 years ago

10.3390/ijerph181910303

Prediction of Geosmin at Different Depths of Lake Using Machine Learning Techniques
Cited by: 3
Author(s): Yong‐Su Kwon, In-Hwan Cho, Ha-Kyung Kim, Jeong-Hwan Byun, Mi‐Jung Bae, Baik‐Ho Kim
Software Mentions: 4
Published: about 3 years ago

10.1371/journal.pone.0144359

Beyond Axillary Lymph Node Metastasis, BMI and Menopausal Status Are Prognostic Determinants for Triple-Negative Breast Cancer Treated by Neoadjuvant Chemotherapy
Cited by: 25
Author(s): Hélène Bonsang-Kitzis, Léonor Chaltier, Lisa Belin, Alexia Savignoni, Roman Rouzier, Marie‐Paule Sablin, Florence Lerebours, François-Clément Bidard, Paul Cottu, Xavier Sastre-Garau, Marick Laé, Jean‐Yves Pierga, Fabien Reyal
Software Mentions: 4
Published: almost 9 years ago

10.1186/s12894-021-00849-w

Development and head-to-head comparison of machine-learning models to identify patients requiring prostate biopsy
Cited by: 4
Author(s): Shuanbao Yu, Tao Jin, Biao Dong, Yafeng Fan, Haopeng Du, Haotian Deng, Jinshan Cui, Guodong Hong, Xuepei Zhang
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0184321

A detailed comparison of analysis processes for MCC-IMS data in disease classification—Automated methods can replace manual peak annotations
Cited by: 7
Author(s): Salome Horsch, Dominik Kopczynski, Elias Kuthe, Jan Baumbach, Sven Rahmann, Jörg Rahnenführer
Software Mentions: 4
Published: about 7 years ago

10.1371/journal.pone.0254089

Cervical cancer risk and access: Utilizing three statistical tools to assess Haitian women in South Florida
Cited by: 2
Author(s): R Moïse, Raymond R. Balise, Camille Ragin, Erin Kobetz
Software Mentions: 4
Published: over 3 years ago

10.3389/fonc.2021.659969

Comparison of Different Machine Models Based on Contrast-Enhanced Computed Tomography Radiomic Features to Differentiate High From Low Grade Clear Cell Renal Cell Carcinomas
Cited by: 6
Author(s): Xu Pei, Ping Wang, Jialiang Ren, Xiaoping Yin, Luyao Ma, Yun Wang, Xiaohai Ma, Bu-Lang Gao
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0230799

The SIESTA (SEAAV Integrated evaluation sedation tool for anaesthesia) project: Initial development of a multifactorial sedation assessment tool for dogs
Cited by: 11
Author(s): Fernando Martínez-Taboada, J. I. Redondo
Software Mentions: 4
Published: over 4 years ago

10.3389/fpls.2021.636915

Trait Diversity of Pulse Species Predicts Agroecosystem Properties Trade-Offs
Cited by: 0
Author(s): Julie Guiguitant, Denis Vile, Hélène Marrou
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0174098

Electricity forecasting on the individual household level enhanced based on activity patterns
Cited by: 74
Author(s): Krzysztof Gajowniczek, Tomasz Ząbkowski
Software Mentions: 3
Published: over 7 years ago

10.1186/1471-2105-8-25

Bias in random forest variable importance measures: Illustrations, sources and a solution
Cited by: 2,364
Author(s): Carolin Strobl, Anne‐Laure Boulesteix, Achim Zeileis, Torsten Hothorn
Software Mentions: 3
Published: almost 18 years ago

10.1155/2021/3984463

Identification of Potential lncRNAs and miRNAs as Diagnostic Biomarkers for Papillary Thyroid Carcinoma Based on Machine Learning
Cited by: 14
Author(s): Fei Yang, Jie Zhang, Baokun Li, Zhao Zhi-gang, Yan Liu, Zhen Zhao, Jing Shao, Guiying Wang
Software Mentions: 3
Published: over 3 years ago

10.1007/s00127-020-01893-x

Deliberate self-harm and associated risk factors in young adults: the importance of education attainment and sick leave
Cited by: 2
Author(s): Ketil Lunde, Lars Mehlum, Ingrid Melle, Ping Qin
Software Mentions: 3
Published: over 4 years ago

10.1186/1471-2415-13-40

Tear fluid proteomics multimarkers for diabetic retinopathy screening
Cited by: 46
Author(s): Zsuzsa Török, Tünde Pető, Éva Csősz, Edit Tukacs, Ágnes Molnár, Zsuzsanna Maros-Szabó, András Berta, József Tőzsér, András Hajdú, Valéria Nagy, Bálint Domokos, Adrienne Csutak
Software Mentions: 3
Published: over 11 years ago

10.1371/journal.pntd.0001354

Evaluation of qPCR-Based Assays for Leprosy Diagnosis Directly in Clinical Specimens
Cited by: 57
Author(s): Alejandra N. Martínez, Marcelo Ribeiro-Alves, Euzenir Nunes Sarno, Milton Ozório Moraes
Software Mentions: 3
Published: about 13 years ago

10.1371/journal.pntd.0003638

Sensitivity and Specificity of a Novel Classifier for the Early Diagnosis of Dengue
Cited by: 33
Author(s): Nguyễn Minh Tuấn, Ho Thi Nhan, Nguyễn Văn Vĩnh Châu, Nguyễn Thành Hưng, Ha Manh Tuan, Ta Van Tram, Nguyen Le Da Ha, Phan Loi, Han Khoi Quang, Duong Thi Hue Kien, Sonya Hubbard, Tran Nguyen Bich Chau, Bridget Wills, Marcel Wolbers, Cameron P. Simmons
Software Mentions: 3
Published: over 9 years ago

10.1111/acel.12470

Reduced <scp>DNA</scp> methylation patterning and transcriptional connectivity define human skin aging
Cited by: 59
Author(s): Felix Bormann, Manuel Rodríguez-Paredes, Sabine Hagemann, Himanshu Manchanda, Boris Kristof, Julian Gutekunst, Günter Raddatz, Rainer Haas, Lara Terstegen, Horst Wenck, Lars Kaderali, Marc Winnefeld, Frank Lyko
Software Mentions: 3
Published: over 8 years ago

10.1186/s13075-019-2092-7

Rule-based and machine learning algorithms identify patients with systemic sclerosis accurately in the electronic health record
Cited by: 24
Author(s): Lia Jamian, Lee Wheless, Leslie J. Crofford, April Barnado
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pcbi.1005327

A Two-Locus Model of the Evolution of Insecticide Resistance to Inform and Optimise Public Health Insecticide Deployment Strategies
Cited by: 23
Author(s): Bethany Levick, Andy South, Ian M. Hastings
Software Mentions: 3
Published: almost 8 years ago

10.1186/1471-2288-14-13

Reasons for participation and non-participation in a diabetes prevention trial among women with prior gestational diabetes mellitus (GDM)
Cited by: 42
Author(s): Jennifer J. Infanti, Angela O’Dea, Irene Gibson, Brian E. McGuire, John Newell, Liam Glynn, Ciarán O’Neill, Susan Connolly, Fidelma Dunne
Software Mentions: 3
Published: almost 11 years ago

10.1371/journal.pcbi.1005921

Probing instructions for expression regulation in gene nucleotide compositions
Cited by: 11
Author(s): Chloé Bessière, May Taha, Florent Petitprez, Jimmy Vandel, Jean‐Michel Marin, Laurent Bréhélin, Sophie Lèbre, Charles-Henri Lecellier
Software Mentions: 3
Published: almost 7 years ago

10.1186/s12859-017-1537-8

GATK hard filtering: tunable parameters to improve variant calling for next generation sequencing targeted gene panel data
Cited by: 64
Author(s): Simona De Summa, Giovanni Malerba, Rosamaria Pinto, Antonio Mori, Vladan Mijatovic, Stefania Tommasi
Software Mentions: 3
Published: over 7 years ago

10.1186/1471-2105-14-315

A novel strategy for classifying the output from an in silicovaccine discovery pipeline for eukaryotic pathogens using machine learning algorithms
Cited by: 32
Author(s): Stephen J. Goodswen, Paul J. Kennedy, John Ellis
Software Mentions: 3
Published: about 11 years ago

10.1038/s41598-020-73237-3

Prognostic value of FDG-PET radiomics with machine learning in pancreatic cancer
Cited by: 34
Author(s): Yoshitaka Toyama, Masatoshi Hotta, Fuyuhiko Motoi, Kentaro Takanami, Ryogo Minamimoto, Kei Takase
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0207799

Subgrouping breast cancer patients based on immune evasion mechanisms unravels a high involvement of transforming growth factor-beta and decoy receptor 3
Cited by: 19
Author(s): Mayassa J. Bou‐Dargham, Yuhang Liu, Qing‐Xiang Amy Sang, Jinfeng Zhang
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-020-75513-8

Integration of metabolomics and transcriptomics reveals novel biomarkers in the blood for tuberculosis diagnosis in children
Cited by: 19
Author(s): Noton K. Dutta, Jeffrey A. Tornheim, Kiyoshi F. Fukutani, Mandar Paradkar, Rafael Tibúrcio, Aarti Kinikar, Chhaya Valvi, Vandana Kulkarni, Neeta Pradhan, Shri Vijay Bala Yogendra Shivakumar, Anju Kagal, Akshay Gupte, Nikhil Gupte, Vidya Mave, Amita Gupta, Bruno B. Andrade, Petros C. Karakousis
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41598-021-88053-6

Practical clinical and radiological models to diagnose COVID-19 based on a multicentric teleradiological emergency chest CT cohort
Cited by: 1
Author(s): Paul Schuster, Amandine Crombé, Hubert Nivet, Alice H. Berger, Laurent Pourriol, Nicolas Favard, Alban Chazot, Florian Alonzo-Lacroix, Emile Youssof, A. Ben Cheikh, Julien Balique, Basile Porta, F. Petitpierre, Grégoire Bouquet, Charles Mastier, Flavie Bratan, Jean-François Bergerot, Vivien Thomson, Nathan Banaste, Guillaume Gorincour
Software Mentions: 3
Published: over 3 years ago

10.2196/medinform.6690

Patient-Specific Predictive Modeling Using Random Forests: An Observational Study for the Critically Ill
Cited by: 28
Author(s): Joon Lee
Software Mentions: 3
Published: almost 8 years ago

10.3390/ani10061017

Predicting Productive Performance in Grow-Finisher Pigs Using Birth and Weaning Body Weight
Cited by: 19
Author(s): Jordi Camp Montoro, Edgar García Manzanilla, David Solà-Oriol, Ramón Muns, J. Gasa, Oliver Clear, Julia Adriana Calderón Díaz
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0172743

Waterdock 2.0: Water placement prediction for Holo-structures with a pymol plugin
Cited by: 35
Author(s): Akshay Sridhar, Gregory A. Ross, Philip C. Biggin
Software Mentions: 3
Published: over 7 years ago

10.1186/s12879-021-06478-w

Clinical characteristics and a decision tree model to predict death outcome in severe COVID-19 patients
Cited by: 11
Author(s): Qiao Yang, Jixi Li, Zhenyu Zhang, Xiao‐Cheng Wu, Tongquan Liao, Shiyong Yu, Zaichun You, Xianhua Hou, Jun Ye, Gang Liu, Siyuan Ma, Ganfeng Xie, Yi Zhou, Mengxia Li, Meihui Wu, Yimei Feng, Weili Wang, Lufeng Li, Dongjing Xie, Yunhui Hu, Liu Xi, Bin Wang, Songtao Zhao, Li Li, Chunmei Luo, Tang Tang, Hongmei Wang, Tianyu Hu, Guihong Yang, Bangyu Luo, Lingchen Li, Xiu Yang, Qi Li, Zhi Xu, Hao Wu, Jianping Sun
Software Mentions: 3
Published: over 3 years ago

10.1038/srep08241

Exploration of diarrhoea seasonality and its drivers in China
Cited by: 18
Author(s): Zhiwei Xu, Wenbiao Hu, Yewu Zhang, Xiaofeng Wang, Maigeng Zhou, Hong Su, Cunrui Huang, Shilu Tong, Qing Guo
Software Mentions: 3
Published: almost 10 years ago

10.1038/s41598-017-15789-5

Spatial distribution of tree species in evergreen-deciduous broadleaf karst forests in southwest China
Cited by: 46
Author(s): Hu Du, Fang Hu, Fuping Zeng, Kelin Wang, Weidan Peng, Hao Zhang, Zhongda Zeng, Fang Zhang, Tao Song
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0110664

Soil Temperature Determines the Reaction of Olive Cultivars to Verticillium dahliae Pathotypes
Cited by: 29
Author(s): Rocío Calderón, Carlos Lucena, J. L. Trapero-Casas, Pablo J. Zarco‐Tejada, Juan A Navas‐Cortés
Software Mentions: 3
Published: about 10 years ago

10.1186/s12879-020-05091-7

Live poultry market closure and avian influenza A (H7N9) infection in cities of China, 2013–2017: an ecological study
Cited by: 6
Author(s): Ying Chen, Jian Cheng, Zhiwei Xu, Wenbiao Hu, Jiahai Lu
Software Mentions: 3
Published: over 4 years ago

10.3390/metabo10030121

Comparative Metabolomics and Molecular Phylogenetics of Melon (Cucumis melo, Cucurbitaceae) Biodiversity
Cited by: 33
Author(s): Annick Moing, J. William Allwood, Asaph Aharoni, John M. Baker, Michael H. Beale, Shifra Ben‐Dor, Benoît Biais, Federico I. Brigante, Y. Burger, Catherine Deborde, Alexander Erban, Adi Faigenboim, Amit Gur, Royston Goodacre, Thomas H. Hansen, Daniel Jacob, Nurit Katzir, Joachim Kopka, Efraim Lewinsohn, Mickaël Maucourt, Sagit Meir, Sonia J. Miller, Roland Mumm, Elad Oren, Harry S. Paris, Ilana Rogachev, Dominique Rolin, Uzi Saar, Jan K. Schjøerring, Yaakov Tadmor, Galil Tzuri, Ric C. H. de Vos, Jane L. Ward, Elena Yeselson, Robert D. Hall, Arthur A. Schaffer
Software Mentions: 3
Published: over 4 years ago

10.1097/MD.0000000000010833

Predicting epidermal growth factor receptor gene amplification status in glioblastoma multiforme by quantitative enhancement and necrosis features deriving from conventional magnetic resonance imaging
Cited by: 3
Author(s): Fei Dong, Qiang Zeng, Biwang Jiang, Xinfeng Yu, Weiwei Wang, Jingjing Xu, Jinming Yu, Qian Li, Minming Zhang
Software Mentions: 3
Published: over 6 years ago

10.1186/s40813-020-00176-w

A bio-economic simulation study on the association between key performance indicators and pluck lesions in Irish farrow-to-finish pig farms
Cited by: 6
Author(s): Julia Adriana Calderón Díaz, Maria Rodrigues da Costa, L. Shalloo, Jarkko Niemi, Finola C. Leonard, Daniel Crespo-Piazuelo, J. Gasa, Edgar García Manzanilla
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41598-018-31527-x

Some things never change: multi-decadal stability in humpback whale calling repertoire on Southeast Alaskan foraging grounds
Cited by: 18
Author(s): Michelle E. H. Fournet, Christine M. Gabriele, David C. Culp, Fred Sharpe, David K. Mellinger, Holger Klinck
Software Mentions: 3
Published: about 6 years ago

10.1186/1472-6963-13-219

Effects of multiple chronic conditions on health care costs: an analysis based on an advanced tree-based regression model
Cited by: 42
Author(s): Hans‐Helmut König, Hanna Leicht, Horst Bickel, Ângela Fuchs, Jochen Gensichen, Wolfgang Maier, Karola Mergenthal, Steffi G. Riedel‐Heller, Ingo Schäfer, Gerhard Schön, Siegfried Weyerer, Birgitt Wiese, Hendrik van den Bussche, Martin Scherer, Matthias Eckardt
Software Mentions: 3
Published: over 11 years ago

Projects: cran: rpart

Papers Mentioning rpart 431