cran: rgl | Projects | Ecosyste.ms: Papers

10.3390/ijms21239198

Multi-Omics Analysis Provides Novel Insight into Immuno-Physiological Pathways and Development of Thermal Resistance in Rainbow Trout Exposed to Acute Thermal Stress
Cited by: 18
Author(s): HyeongJin Roh, Ahran Kim, Nameun Kim, Yoonhang Lee, Do-Hyung Kim
Software Mentions: 3
Published: almost 4 years ago

10.1080/20002297.2017.1374152

Effect of maltitol-containing chewing gum use on the composition of dental plaque microbiota in subjects with active dental caries
Cited by: 10
Author(s): Erica M. Prosdocimi, James Kistler, Rebecca Moazzez, Clémentine Thabuis, Caroline Perreau, William G. Wade
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-021-88961-7

Macrophage morphological plasticity and migration is Rac signalling and MMP9 dependant
Cited by: 8
Author(s): Jana Trávníčková, Sandra Nhim, Naoill Abdellaoui, Farida Djouad, Maï Nguyen-Chi, Andrea Parmeggiani, Karima Kissa
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.59976

Distinct subpopulations of mechanosensory chordotonal organ neurons elicit grooming of the fruit fly antennae
Cited by: 15
Author(s): Stefanie Hampel, Katharina Eichler, Daichi Yamada, Davi D. Bock, Azusa Kamikouchi, Andrew M. Seeds
Software Mentions: 2
Published: about 4 years ago

10.1098/rsos.160229

Depth and substratum differentiations among coexisting herbivorous cichlids in Lake Tanganyika
Cited by: 5
Author(s): Hiroki Hata, Haruki Ochi
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-019-55590-0

Genome-wide human brain eQTLs: In-depth analysis and insights using the UKBEC dataset
Cited by: 16
Author(s): Letitia M. F. Sng, Peter Thomson, Daniah Trabzuni
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12958-017-0261-6

Expression of genes associated with BMP signaling pathway in porcine oocytes before and after IVM – a microarray approach
Cited by: 12
Author(s): Joanna Budna, Marta Rybska, Sylwia Ciesiółka, Artur Bryja, Sylwia Borys, Wiesława Kranc, Katarzyna Wojtanowicz-Markiewicz, Michal Ješeta, Ewa Sumelka, Dorota Bukowska, Paweł Antosik, Klaus‐Peter Brüssow, M Bruska, Michał Nowicki, Maciej Zabel, Bartosz Kempisty
Software Mentions: 2
Published: over 7 years ago

10.5713/ajas.19.0278

Effect of increasing levels of rice distillers’ by-product on growth performance, nutrient digestibility, blood profile and colonic microbiota of weaned piglets
Cited by: 4
Author(s): Oanh Nguyen Cong, Bernard Taminiau, Dang Pham Kim, Georges Daube, Giap Nguyen Van, Jérôme Bindelle, Papa Abdulaye Fall, Vu Đinh Ton, Jean-Luc Hornick
Software Mentions: 2
Published: over 4 years ago

10.1128/AAC.00265-17

High-Resolution Melting Analysis for Rapid Detection of Sequence Type 131 Escherichia coli
Cited by: 12
Author(s): Lucas Harrison, Nancy D. Hanson
Software Mentions: 2
Published: over 7 years ago

10.1186/s13015-016-0089-1

An efficient algorithm for protein structure comparison using elastic shape analysis
Cited by: 10
Author(s): Sudhir Srivastava, Shashi Bhushan Lal, Dwijesh Chandra Mishra, U. B. Angadi, Krishna Kumar Chaturvedi, N. Shesh, Anil Rai
Software Mentions: 2
Published: about 8 years ago

10.3390/ijerph14111381

The Interaction between Ambient PM10 and NO2 on Mortality in Guangzhou, China
Cited by: 16
Author(s): Yuzhou Gu, Hualiang Lin, Tao Liu, Jianpeng Xiao, Weilin Zeng, Zhihao Li, Xiaojuan Lv
Software Mentions: 2
Published: about 7 years ago

10.1017/S0007114516001045

Modulation of gut microbiota dysbioses in type 2 diabetic patients by macrobiotic Ma-Pi 2 diet
Cited by: 164
Author(s): Marco Candela, Elena Biagi, Matteo Soverini, Clarissa Consolandi, Sara Quercia, Marco Severgnini, Clelia Peano, Silvia Turroni, Simone Rampelli, Paolo Pozzilli, Mario Pianesi, F. Fallucca, Patrizia Brigidi
Software Mentions: 2
Published: over 8 years ago

10.1038/srep32341

Characterization of Inflammatory Response in Acute-on-Chronic Liver Failure and Relationship with Prognosis
Cited by: 94
Author(s): Cristina Solé, Elsa Solà, Manuel Morales‐Ruiz, Guerau Fernàndez, Patrícia Huelín, Isabel Graupera, Rebeca Moreira, Glòria de Prada, Xavier Ariza, Elisa Pose, Núria Fabrellas, Susana G. Kalko, Wladimiro Jiménez, Pere Ginès
Software Mentions: 2
Published: about 8 years ago

10.3389/fmicb.2019.02100

How Management Practices Within a Poultry House During Successive Flock Rotations Change the Structure of the Soil Microbiome
Cited by: 13
Author(s): Tawni L. Crippen, Cynthia L. Sheffield, Baneshwar Singh, J. A. Byrd, Ross C. Beier
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2016.01679

Assessing Marine Microbial Induced Corrosion at Santa Catalina Island, California
Cited by: 30
Author(s): Gustavo A. Ramírez, Colleen L. Hoffman, Michael Lee, Ryan A. Lesniewski, Roman A. Barco, Arkadiy I. Garber, Brandy M. Toner, C. G. Wheat, Katrina J. Edwards, Beth N. Orcutt
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pntd.0007222

Frequent expansion of Plasmodium vivax Duffy Binding Protein in Ethiopia and its epidemiological significance
Cited by: 23
Author(s): Eugenia Lo, Jessica B. Hostetler, Delenasaw Yewhalaw, Richard D. Pearson, Muzamil Mahdi Abdel Hamid, Karthigayan Gunalan, Daniel Kepple, Anthony M. Ford, Daniel Janies, Julian C. Rayner, Louis H. Miller, Guiyun Yan
Software Mentions: 2
Published: about 5 years ago

10.1242/dev.152041

Control of inner cells' proportion by asymmetric divisions and ensuing resilience of cloned rabbit embryos
Cited by: 4
Author(s): Dimitri Fabrèges, Nathalie Daniel, Véronique Duranthon, Nadine Peyriéras
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-020-69245-y

Convolutional neural networks improve fungal classification
Cited by: 13
Author(s): Duong Vu, Marizeth Groenewald, G.J.M. Verkley
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pcbi.1004130

Neuroblastoma Tyrosine Kinase Signaling Networks Involve FYN and LYN in Endosomes and Lipid Rafts
Cited by: 62
Author(s): Juan Manuel Palacios‐Moreno, Lauren Foltz, Ailan Guo, Matthew P. Stokes, Emily D. Kuehn, Lynn George, Michael J. Comb, Mark L. Grimes
Software Mentions: 2
Published: over 9 years ago

10.1093/database/bay080

SAGE: a comprehensive resource of genetic variants integrating South Asian whole genomes and exomes
Cited by: 19
Author(s): Judith Mary Hariprakash, Shamsudheen Karuthedath Vellarikkal, Ankit Verma, Anop Singh Ranawat, Rijith Jayarajan, Rowmika Ravi, Anoop Kumar, Vishal Dixit, Ambily Sivadas, Atul Kashyap, Vigneshwar Senthivel, Paras Sehgal, Vijayalakshmi Mahadevan, Vinod Scaria, Sridhar Sivasubbu
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-017-00071-5

Signatures of personality on dense 3D facial images
Cited by: 12
Author(s): Sile Hu, Jieyi Xiong, Pengcheng Fu, Qiao Liao, Jingze Tan, Jin Li, Kun Tang
Software Mentions: 1
Published: over 7 years ago

10.3390/microorganisms9061233

Genotypic and Phenotypic Characterization of Highly Alkaline-Resistant Carnobacterium maltaromaticum V-Type ATPase from the Dairy Product Based on Comparative Genomics
Cited by: 4
Author(s): HyeongJin Roh, Do-Hyung Kim
Software Mentions: 1
Published: over 3 years ago

10.3390/metabo11050282

Human Stool Metabolome Differs upon 24 h Blood Pressure Levels and Blood Pressure Dipping Status: A Prospective Longitudinal Study
Cited by: 4
Author(s): Justine Huart, Arianna Cirillo, Bernard Taminiau, Julie Descy, Annie Saint-Remy, Georges Daube, Jean-Marie Krzesinski, Pierrette Melin, Pascal De Tullio, François Jouret
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-018-36163-z

RAGE is a Critical Mediator of Pulmonary Oxidative Stress, Alveolar Macrophage Activation and Emphysema in Response to Cigarette Smoke
Cited by: 41
Author(s): Karl Sanders, Don A. Delker, Thomas P. Huecksteadt, Emily Beck, Tana Wuren, Yuntian Chen, Yuxia Zhang, Mark W. Hazel, John R. Hoidal
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-019-55254-z

Re-evaluation of the evolution of influenza H1 viruses using direct PCA
Cited by: 9
Author(s): Tomokazu Konishi
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12882-015-0081-x

End stage renal disease as a modifier of the periodontal microbiome
Cited by: 23
Author(s): Michel V. Furtado Araújo, Bo-Young Hong, Philip L. Fava, Shiza Khan, Joseph A. Burleson, George Fares, Wilner Samson, Linda D. Strausbaugh, Patricia I. Diaz, Effie Ioannidou
Software Mentions: 1
Published: over 9 years ago

10.3389/fpls.2019.01390

GWAS to Identify Genetic Loci for Resistance to Yellow Rust in Wheat Pre-Breeding Lines Derived From Diverse Exotic Crosses
Cited by: 33
Author(s): Lourdes Ledesma-Ramírez, Ernesto Solís-Moya, Gabriel Iturriaga, Deepmala Sehgal, M. H. Reyes-Valdés, Víctor Montero-Tavera, Carolina Sansaloni, Juan Burgueño, Claudia Vásquez, César Leobardo Aguirre-Mancilla, Juan Gabriel Ramírez-Pimentel, Prashant Vikram, Sukhwinder Singh
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-69686-5

Single amino acid utilization for bacterial categorization
Cited by: 13
Author(s): Yi-Kai Liu, Hung-Chih Kuo, Chih‐Ho Lai, Chi-Chung Chou
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-89998-4

New evidence from exceptionally “well-preserved” specimens sheds light on the structure of the ammonite brachial crown
Cited by: 4
Author(s): Christopher P. A. Smith, Neil H. Landman, Jérémie Bardin, Isabelle Kruta
Software Mentions: 1
Published: over 3 years ago

10.1186/1471-2288-9-32

Visualising disease progression on multiple variables with vector plots and path plots
Cited by: 4
Author(s): Stanley E. Lazic, Sarah Mason, Andrew W. Michell, Roger A. Barker
Software Mentions: 1
Published: over 15 years ago

10.1186/1472-6750-7-34

Construction and model-based analysis of a promoter library for E. coli: an indispensable tool for metabolic engineering
Cited by: 157
Author(s): Marjan De Mey, Jo Maertens, Gaspard Lequeux, Wim Soetaert, Erick Vandamme
Software Mentions: 1
Published: almost 18 years ago

10.1093/bjsopen/zraa040

Classification of the colonic splenic flexure based on three-dimensional CT analysis
Cited by: 4
Author(s): Kazushige Kawai, Hiroaki Nozawa, Keisuke Hata, Toshiaki Tanaka, Takeshi Nishikawa, Kazuhito Sasaki, Soichiro Ishihara
Software Mentions: 1
Published: almost 4 years ago

10.3389/fgene.2020.589490

Haplotype-Based, Genome-Wide Association Study Reveals Stable Genomic Regions for Grain Yield in CIMMYT Spring Bread Wheat
Cited by: 23
Author(s): Deepmala Sehgal, Suchismita Mondal, Leonardo Crespo‐Herrera, Velu Govindan, Philomin Juliana, Julio Huerta‐Espino, Sandesh Shrestha, Jesse Poland, Ravi P. Singh, Susanne Dreisigacker
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2017.02391

The Microbiome of Potentially Malignant Oral Leukoplakia Exhibits Enrichment for Fusobacterium, Leptotrichia, Campylobacter, and Rothia Species
Cited by: 86
Author(s): Abdrazak Amer, Sheila Galvin, Claire M. Healy, Gary P. Moran
Software Mentions: 1
Published: almost 7 years ago

10.3389/fgene.2019.00982

Copy Number Variation Mapping and Genomic Variation of Autochthonous and Commercial Turkey Populations
Cited by: 11
Author(s): M.G. Strillacci, Erca gorla, Ángel Ríos Utrera, Vicente Eliezer Vega Murillo, Moisés Montaño Bermúdez, Adriana García-Ruiz, S. Cerolini, Sergio Iván Román-Ponce, A. Bagnato
Software Mentions: 1
Published: about 5 years ago

10.3389/fphar.2015.00257

Pharmacological profiling of zebrafish behavior using chemical and genetic classification of sleep-wake modifiers
Cited by: 23
Author(s): Yuhei Nishimura, Shiko Okabe, Shota Sasagawa, Soichiro Murakami, Yoshifumi Ashikawa, Mizuki Yuge, Koki Kawaguchi, Reiko Kawase, Toshio Tanaka
Software Mentions: 1
Published: about 9 years ago

10.3389/fphys.2017.00615

Spontaneous Preterm Birth Is Associated with Differential Expression of Vaginal Metabolites by Lactobacilli-Dominated Microflora
Cited by: 72
Author(s): Graham P. Stafford, Jennifer Parker, Emmanuel Amabebe, James Kistler, Steven Reynolds, Victoria Stern, Martyn Paley, Dilly Anumba
Software Mentions: 1
Published: over 7 years ago

10.1186/s12866-018-1176-x

Development of the tonsillar microbiome in pigs from newborn through weaning
Cited by: 24
Author(s): Luis Carlos Pena Cortes, Rhiannon M. LeVeque, Julie A. Funk, Terence L. Marsh, Martha H. Mulks
Software Mentions: 1
Published: over 6 years ago

10.1007/s10157-021-02037-4

Association of mineral metabolism biomarkers with chronic kidney disease in Chinese adults
Cited by: 1
Author(s): Jialin Li, Danni He, Wenjing Zhao, Xi’ai Wu, Minjing Luo, Ying Wang, Meihua Yan, Wenquan Niu, Ping Li
Software Mentions: 1
Published: over 3 years ago

10.1038/s41419-018-0990-2

Establishment of stable iPS-derived human neural stem cell lines suitable for cell therapies
Cited by: 35
Author(s): Jessica Rosati, Daniela Ferrari, Filomena Altieri, Silvia Tardivo, Claudia Ricciolini, Caterina Fusilli, Cristina Zalfa, Daniela Celeste Profico, Francesca Pinos, Laura Bernardini, Bárbara Torres, Isabella Manni, Giulia Piaggio, Elena Binda, Massimiliano Copetti, Giuseppe Lamorte, Tommaso Mazza, Massimo Carella, Maurizio Gelati, Enza Maria Valente, Antonio Simeone, Angelo L. Vescovi
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0038315

Phenology of Scramble Polygyny in a Wild Population of Chrysolemid Beetles: The Opportunity for and the Strength of Sexual Selection
Cited by: 13
Author(s): Martha L. Baena, Rogélio Macías-Ordóñez
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0071227

Bacterial Community Development in Experimental Gingivitis
Cited by: 160
Author(s): James Kistler, Veronica Booth, David J. Bradshaw, William Wade
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0067640

Unexpected Regularity in Swimming Behavior of Clausocalanus furcatus Revealed by a Telecentric 3D Computer Vision System
Cited by: 16
Author(s): Giuseppe Bianco, Vincenzo Botte, Laurent Dubroca, Maurizio Ribera d’Alcalà, Maria Grazia Mazzocchi
Software Mentions: 1
Published: over 11 years ago

10.1161/JAHA.117.006500

Neopterin as an Effect Modifier of the Cardiovascular Risk Predicted by Total Homocysteine: A Prospective 2‐Cohort Study
Cited by: 12
Author(s): Espen Øglænd Bjørnestad, Robert Andre Borsholm, Gard Frodahl Tveitevåg Svingen, Eva Ringdal Pedersen, Reinhard Seifert, Øivind Midttun, Per Magne Ueland, Grethe S. Tell, Kaare Harald Bønaa, Ottar Nygård
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0096227

Laboratory Selection Quickly Erases Historical Differentiation
Cited by: 32
Author(s): Inês Fragata, Pedro Simões, Miguel Lopes‐Cunha, Margarida Lima, Bárbara Kellen, Margarida Bárbaro, Josiane Santos, Michael R. Rose, Mauro Santos, Margarida Matos
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0194842

Pharmacogenetic landscape of Metabolic Syndrome components drug response in Tunisia and comparison with worldwide populations
Cited by: 5
Author(s): Haifa Jmel, Lilia Romdhane, Yosra Ben Halima, Meriem Hechmi, Chokri Naouali, Hamza Dallali, Yosr Hamdi, Jingxuan Shan, A. Abid, H. Jamoussi, Sameh Trabelsi, Lotfi Chouchane, Donata Luiselli, Sonia Abdelhak, Rym Kéfi
Software Mentions: 1
Published: over 6 years ago

10.1039/c5tc03895b

A novel design strategy for nanoparticles on nanopatterns: interferometric lithographic patterning of Mms6 biotemplated magnetic nanoparticles
Cited by: 24
Author(s): Scott M. Bird, Osama El-Zubir, Andrea E. Rawlings, Graham J. Leggett, Sarah S. Staniland
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pmed.1001807

Broad Blockade Antibody Responses in Human Volunteers after Immunization with a Multivalent Norovirus VLP Candidate Vaccine: Immunological Analyses from a Phase I Clinical Trial
Cited by: 119
Author(s): Lisa C. Lindesmith, Martin T. Ferris, Clancy Mullan, Jennifer Ferreira, Kari Debbink, Jesica Swanstrom, Charles C. Richardson, Robert R. Goodwin, Frank Baehner, Paul M. Mendelman, Robert F. Bargatze, Ralph S. Baric
Software Mentions: 1
Published: over 9 years ago

10.1073/pnas.1814409116

Phospholipid membranes drive abdominal aortic aneurysm development through stimulating coagulation factor activity
Cited by: 22
Author(s): Keith Allen-Redpath, Maceler Aldrovandi, Sarah N. Lauder, A Gketsopoulou, Victoria J. Tyrrell, David A. Slatter, Robert Andrews, William J. Watkins, Gemma Atkinson, Eileen McNeill, A Gilfedder, Majd Protty, James J. Burston, Johnson Src., Rodrigues Prs., Daniel P. Jones, R Lee, Ashok Handa, Keith M. Channon, Samya Obaji, Jorge Álvarez-Jarreta, Gerhard Krönke, Jochen A. Ackermann, Patrick Jenkins, Peter William Collins, Valerie Bridget O'Donnell
Software Mentions: 1
Published: over 5 years ago

10.1007/s00426-017-0893-3

Communication for coordination: gesture kinematics and conventionality affect synchronization success in piano duos
Cited by: 25
Author(s): Laura Bishop, Werner Goebl
Software Mentions: 1
Published: over 7 years ago

10.1016/j.agrformet.2019.107898

Investigating the effects of inter-annual weather variation (1968–2016) on the functional response of cereal grain yield to applied nitrogen, using data from the Rothamsted Long-Term Experiments
Cited by: 25
Author(s): John W.G. Addy, R. H. Ellis, A. J. Macdonald, Mikhail A. Semenov, Andrew Mead
Software Mentions: 1
Published: over 4 years ago

10.3945/ajcn.115.116244

Dietary nitrate improves vascular function in patients with hypercholesterolemia: a randomized, double-blind, placebo-controlled study
Cited by: 184
Author(s): Shanti Velmurugan, Jasmine Gan, Krishnaraj S. Rathod, Rayomand S Khambata, Suborno Ghosh, Amy Hartley, Sven van Eijl, Virág Sági-Kiss, Tahseen A Chowdhury, Michael A. Curtis, Gunter Kuhnle, William G. Wade, Amrita Ahluwalia
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep16574

Identification of a New Cell Population Constitutively Circulating in Healthy Conditions and Endowed with a Homing Ability Toward Injured Sites
Cited by: 13
Author(s): Claudia Lo Sicco, Roberta Tasso, Daniele Reverberi, Michele Cilli, Ulrich Pfeffer, Ranieri Cancedda
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pbio.3000476

Transcriptional regulatory divergence underpinning species-specific learned vocalization in songbirds
Cited by: 19
Author(s): Hongdi Wang, Azusa Sawai, Noriyuki Toji, Rintaro Sugioka, Yukino Shibata, Yuika Suzuki, Yu Ji, Shin Hayase, Satoru Akama, Jun Sese, Kazuhiro Wada
Software Mentions: 1
Published: about 5 years ago

10.3897/zookeys.801.23677

Size dependence of offspring production in isopods: a synthesis
Cited by: 7
Author(s): Andrzej Antoł, Marcin Czarnołęski
Software Mentions: 1
Published: almost 6 years ago

Projects: cran: rgl

Papers Mentioning rgl 156