Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: pro

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/pro

Point-Process Response Model for Optogenetics
1 version
Latest release: over 9 years ago
103 downloads last month

Papers Mentioning pro 47

10.1007/s11214-018-0576-4
The Space Physics Environment Data Analysis System (SPEDAS)
Cited by: 295
Author(s): V. Angelopoulos, P. Cruce, Alexander Drozdov, E. W. Grimes, Nick Hatzigeorgiu, David A. King, D. E. Larson, James W. Lewis, J. M. McTiernan, D. A. Roberts, Chuck Russell, Tomoaki Hori, Yoshiya Kasahara, Atsushi Kumamoto, A. Matsuoka, Yukinaga Miyashita, Yoshizumi Miyoshi, I. Shinohara, Masaaki Teramoto, J. Faden, A. J. Halford, Michael McCarthy, R. M. Millan, J. G. Sample, David M. Smith, L. A. Woodger, A. Masson, Ayris Narock, Kazushi Asamura, T. F. Chang, Che‐Ming Chiang, Y. Kazama, K. Keika, Shoya Matsuda, Takehiko Segawa, K. Seki, Shoji Motomizu, Sunny Wing-Yee Tam, Norio Umemura, B. J. Wang, S. Y. Wang, R. J. Redmon, J. V. Rodriguez, H. J. Singer, J. D. Vandegriff, Shuji Abe, M. Nosé, Atsuki Shinbori, Yoshimasa Tanaka, S. Ueno, L. Andersson, P. Dunn, Christopher Fowler, J. S. Halekas, Takuya Hara, Yuki Harada, C. O. Lee, R. J. Lillis, D. L. Mitchell, M. R. Argall, K. R. Bromund, J. L. Burch, I. J. Cohen, Michael Galloy, B. L. Giles, A. N. Jaynes, O. Le Contel, M. Oka, T. D. Phan, Brian M. Walsh, J. H. Westlake, F. D. Wilder, S. D. Bale, R. Livi, M. Pulupa, P. L. Whittlesey, A. W. DeWolfe, B. Harter, Edson Mello Lucas, U. Auster, J. W. Bonnell, C. M. Cully, E. Donovan, R. E. Ergun, H. U. Frey, B. J. Jackel, A. Keiling, H. Korth, J. P. McFadden, Yoshihiro Nishimura, Ferdinand Plaschke, P. Robert, D. L. Turner, J. M. Weygand, R. M. Candey, Russell D. Johnson, T. J. Kovalick, M. H. Liu, R. E. McGuire, A. W. Breneman, K. Kersten, P. Schroeder
Software Mentions: 11
Published: almost 6 years ago
10.1111/1755-0998.13219
Genetic structure and insecticide resistance characteristics of fall armyworm populations invading China
Cited by: 103
Author(s): Lei Zhang, Bo Liu, Wengang Zheng, Conghui Liu, Dandan Zhang, Shengyuan Zhao, Zaiyuan Li, Pengjun Xu, Kenneth Wilson, Amy Withers, Christopher M. Jones, Judith A. Smith, Gilson Chipabika, Donald L. Kachigamba, Kiwoong Nam, Emmanuelle d’Alençon, Bei Liu, Xinyue Liang, Minghui Jin, Chao Wu, Swapan Chakrabarty, Xinming Yang, Yuying Jiang, Jie Liu, Xiaolin Liu, Weipeng Quan, Guirong Wang, Wei Fan, Wanqiang Qian, Kongming Wu, Yutao Xiao
Software Mentions: 10
Published: over 4 years ago
10.1371/journal.pone.0071515
Genomic Investigation into Strain Heterogeneity and Pathogenic Potential of the Emerging Gastrointestinal Pathogen Campylobacter ureolyticus
Cited by: 21
Author(s): Susan Bullman, Alan Lucid, Daniel Corcoran, Roy D. Sleator, Brigid Lucey
Software Mentions: 7
Published: over 11 years ago
10.1038/s41598-021-92007-3
Validity and safety of ID-JPL934 in lower gastrointestinal symptom improvement
Cited by: 4
Author(s): Cheol Min Shin, Yoon Jin Choi, Dong Hoon Lee, Jin Seok Moon, Tae Yoon Kim, Yoon Keun Kim, Won Hee Lee, Hyuk Yoon, Young Soo Park, Nayoung Kim
Software Mentions: 6
Published: over 3 years ago
10.3390/genes10070552
Transcriptome Analysis of Landrace Pig Subcutaneous Preadipocytes during Adipogenic Differentiation
Cited by: 14
Author(s): Xitong Zhao, Shaokang Chen, Zhen Tan, Yuan Wang, Fengxia Zhang, Ting Yang, Yibing Liu, Ai Hong, Kai Xing, Chuduan Wang
Software Mentions: 5
Published: over 5 years ago
10.1038/s41598-017-11036-z
SRSF1 suppresses selection of intron-distal 5′ splice site of DOK7 intron 4 to generate functional full-length Dok-7 protein
Cited by: 3
Author(s): Khalid Ahsan, Akio Matsubara, Mohammad Alinoor Rahman, Jun‐ichi Takeda, Mohammad Nazim, Bisei Ohkawara, Mikako Ito, Kinji Ohno
Software Mentions: 5
Published: over 7 years ago
10.1016/j.soilbio.2021.108391
Comparing root exudate collection techniques: An improved hybrid method
Cited by: 37
Author(s): Alex Williams, Holly Langridge, Angela L. Straathof, Graeme Fox, Howbeer Muhammadali, Katherine A. Hollywood, Yun Xu, Royston Goodacre, Franciska T. de Vries
Software Mentions: 5
Published: about 3 years ago
10.3390/ijerph18042186
Psychological Impact of Pro-Anorexia and Pro-Eating Disorder Websites on Adolescent Females: A Systematic Review
Cited by: 14
Author(s): Carmela Mento, Maria Catena Silvestri, Maria Rosaria Anna Muscatello, Amelia Rizzo, Laura Celebre, Martina Praticò, Rocco Antonio Zoccali, Antonio Bruno
Software Mentions: 4
Published: almost 4 years ago
10.3389/fpls.2021.670302
CRISPR/Cas9-Induced Loss-of-Function Mutation in the Barley Mitogen-Activated Protein Kinase 6 Gene Causes Abnormal Embryo Development Leading to Severely Reduced Grain Germination and Seedling Shootless Phenotype
Cited by: 8
Author(s): Pavel Křenek, Elizaveta Chubar, Pavol Vadovič, Ludmila Ohnoutková, Tomáš Vlčko, Véronique Bergougnoux, Petr Cápal, Miroslav Ovečka, Jozef Šamaj
Software Mentions: 4
Published: over 3 years ago
10.1111/ejn.14057
Singing activity‐driven <i>Arc</i> expression associated with vocal acoustic plasticity in juvenile songbird
Cited by: 9
Author(s): Shin Hayase, Kazuhiro Wada
Software Mentions: 4
Published: over 6 years ago
10.1002/ece3.6760
Ten strategies for a successful transition to remote learning: Lessons learned with a flipped course
Cited by: 14
Author(s): Ana E. Garcia‐Vedrenne, Chloé Orland, Kimberly M. Ballare, Beth Shapiro, Robert K. Wayne
Software Mentions: 4
Published: about 4 years ago
10.1186/s12974-021-02206-y
Acute pre-operative ibuprofen improves cognition in a rat model for postoperative cognitive dysfunction
Cited by: 14
Author(s): Klaske Oberman, Iris B. Hovens, Jacco J. de Haan, Joana Falcao-Salles, Barbara L. van Leeuwen, Regien G. Schoemaker
Software Mentions: 4
Published: over 3 years ago
10.1002/2211-5463.12425
Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in<i>Amphibacillus xylanus</i>lacking a respiratory chain
Cited by: 9
Author(s): Shinya Kimata, Daichi Mochizuki, Jun‐ichi Satoh, Katsuhisa Kitano, Yu Kanesaki, Kouji Takeda, Akira Abe, Shinji Kawasaki, Youichi Niimura
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.pone.0225031
A novel image encryption technique using hybrid method of discrete dynamical chaotic maps and Brownian motion
Cited by: 35
Author(s): Majid Khan, Fawad Masood, Abdullah Alghafis, Muhammad Bilal Amin, Syeda Iram Batool Naqvi
Software Mentions: 3
Published: about 5 years ago
10.1371/journal.pone.0248774
Antenatal corticosteroids for impending late preterm (34-36+6 weeks) deliveries—A systematic review and meta-analysis of RCTs
Cited by: 22
Author(s): Mangesh Deshmukh, Sanjay Patole
Software Mentions: 3
Published: almost 4 years ago
10.1111/cpr.12692
IL‐37b alleviates inflammation in the temporomandibular joint cartilage via IL‐1R8 pathway
Cited by: 24
Author(s): Ping Luo, Chi Kuang Feng, Chao Jiang, Xiaochun Ren, Liming Gou, Ping Ji, Jie Xu
Software Mentions: 3
Published: about 5 years ago
10.1002/ctm2.296
Ursodesoxycholic acid alleviates liver fibrosis via proregeneration by activation of the ID1‐WNT2/HGF signaling pathway
Cited by: 8
Author(s): Dong Xi, Yun Luo, Shan Lu, Han Ma, Wenchao Zhang, Yue Zhu, Guibo Sun, Xiaobo Sun
Software Mentions: 3
Published: almost 4 years ago
10.1264/jsme2.ME17135
Plant Materials are Sustainable Substrates Supporting New Technologies of Plant-Only-Based Culture Media for &lt;i&gt;in vitro&lt;/i&gt; Culturing of the Plant Microbiota
Cited by: 20
Author(s): Elhussein F. Mourad, Mohamed S. Sarhan, Hassan-Sibroe A. Daanaa, Mennatullah Abdou, Ahmed Morsi, Mohamed R. Abdelfadeel, Hend Elsawey, Rahma A. Nemr, Mahmoud El-Tahan, M. Hamza, Mohamed Abbas, Hanan H. Youssef, Abdelhadi A. Abdelhadi, Wafaa M. Amer, M. B. E. Fayez, Silke Ruppel, N. A. Hegazi
Software Mentions: 3
Published: almost 7 years ago
10.1007/s11207-018-1347-9
An on Orbit Determination of Point Spread Functions for the Interface Region Imaging Spectrograph
Cited by: 11
Author(s): Hans Courrier, C. C. Kankelborg, Bart De Pontieu, J. P. Wülser
Software Mentions: 3
Published: over 6 years ago
10.1007/s40279-019-01084-y
A Systematic Review of Fitness Apps and Their Potential Clinical and Sports Utility for Objective and Remote Assessment of Cardiorespiratory Fitness
Cited by: 38
Author(s): Adrià Muntaner‐Mas, Antonio Martínez-Nicolás, Carl J. Lavie, Steven N. Blair, Robert Ross, Ross Arena, Francisco B. Ortega
Software Mentions: 3
Published: almost 6 years ago
10.1111/febs.14780
Long noncoding <scp>RNA</scp> Crnde attenuates cardiac fibrosis via Smad3‐Crnde negative feedback in diabetic cardiomyopathy
Cited by: 52
Author(s): Dezhi Zheng, Yong Zhang, Yonghe Hu, Jing Guan, Lianbin Xu, Wenjing Xiao, Qinyue Zhong, Chao Ling Ren, Jinfeng Lü, Jiali Liang, Jun Hou
Software Mentions: 3
Published: almost 6 years ago
10.1155/2021/7876489
Integrated Bioinformatics and Experimental Approaches Identified the Role of NPPA in the Proliferation and the Malignant Behavior of Breast Cancer
Cited by: 0
Author(s): Aijun Sun, Xiaonan Sheng, Jinhai Tang, Zhenfeng Yu, Jian Zhang
Software Mentions: 3
Published: about 3 years ago
10.1099/mic.0.000095
Engineered biosynthesis of enduracidin lipoglycopeptide antibiotics using the ramoplanin mannosyltransferase Ram29
Cited by: 18
Author(s): Ming‐Cheng Wu, Matthew Q. Styles, Brian J. C. Law, Anna‐Winona Struck, Laura Nunns, Jason Micklefield
Software Mentions: 3
Published: over 9 years ago
10.1155/2018/8249563
Antidepressant Effect of<i>Fraxinus rhynchophylla</i>Hance Extract in a Mouse Model of Chronic Stress-Induced Depression
Cited by: 27
Author(s): Yu Ri Kim, Bokyung Park, Young Hwa Kim, Insop Shim, In‐Cheol Kang, Mi Young Lee
Software Mentions: 2
Published: over 6 years ago
10.3390/nu13051693
Taste Sensitivity of Elderly People Is Associated with Quality of Life and Inadequate Dietary Intake
Cited by: 14
Author(s): Soyeon Jeon, Yeonhee Kim, Sohyun Min, Min‐Young Song, Sungtaek Son, Seung Min Lee
Software Mentions: 2
Published: over 3 years ago
10.3390/ma14010171
Influence of Fine Grains on the Bending Fatigue Behavior of Two Implant Titanium Alloys
Cited by: 1
Author(s): Xiaojian Cao, Jiangpei Zhu, Fei Gao, Zhu Gao
Software Mentions: 2
Published: almost 4 years ago
10.1111/mcn.12871
Cognitive interviewing to improve women's empowerment questions in surveys: Application to the health and nutrition and intrahousehold relationships modules for the project‐level Women's Empowerment in Agriculture Index
Cited by: 9
Author(s): Anika Hannan, Jessica Heckert, Laurie James‐Hawkins, Kathryn M. Yount
Software Mentions: 2
Published: over 5 years ago
10.1155/2015/912726
Dexamethasone Suppressed LPS-Induced Matrix Metalloproteinase and Its Effect on Endothelial Glycocalyx Shedding
Cited by: 45
Author(s): Na Cui, Hao Wang, Yun Long, Longxiang Su, Dawei Liu
Software Mentions: 2
Published: almost 10 years ago
10.1186/s13007-019-0508-7
Principal variable selection to explain grain yield variation in winter wheat from features extracted from UAV imagery
Cited by: 23
Author(s): Jiating Li, Arun Narenthiran Veeranampalayam-Sivakumar, Madhav Bhatta, Nicholas Garst, Hannah Stoll, P. Stephen Baenziger, Vikas Belamkar, Réka Howard, Yufeng Ge, Yeyin Shi
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0141622
Electroacupuncture Ameliorates Acute Renal Injury in Lipopolysaccharide-Stimulated Rabbits via Induction of HO-1 through the PI3K/Akt/Nrf2 Pathways
Cited by: 31
Author(s): Jianbo Yu, Jia Shi, Yuan Zhang, Lirong Gong, Shuying Dong, Xiaohong Cao, Lili Wu, Lina Wu
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0180424
Plant-fed versus chemicals-fed rhizobacteria of Lucerne: Plant-only teabags culture media not only increase culturability of rhizobacteria but also recover a previously uncultured Lysobacter sp., Novosphingobium sp. and Pedobacter sp.
Cited by: 15
Author(s): N. A. Hegazi, Mohamed S. Sarhan, M. B. E. Fayez, Sascha Patz, Brian R. Murphy, Silke Ruppel
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0136255
Acute Treatment with a Novel TRPC4/C5 Channel Inhibitor Produces Antidepressant and Anxiolytic-Like Effects in Mice
Cited by: 38
Author(s): Li Yang, Fang Jiang, Guojiao Wu, Ke Deng, Meng Wen, Xingyao Zhou, Xuechuan Hong, Michael X. Zhu, Huai Rong Luo
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0094523
Histone Deacetylase 1 and p300 Can Directly Associate with Chromatin and Compete for Binding in a Mutually Exclusive Manner
Cited by: 18
Author(s): Xuehui Li, Hui Yang, Suming Huang, Yi Qiu
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0072401
Application of Fluorescent Monocytes for Probing Immune Complexes on Antigen Microarrays
Cited by: 10
Author(s): Zoltán Szittner, Krisztián Papp, Noémi Sándor, Zsuzsa Bajtay, József Prechl
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0246044
Modeling vehicle ownership with machine learning techniques in the Greater Tamale Area, Ghana
Cited by: 4
Author(s): Mohammed Abdul Muhsin Zambang, Haobin Jiang, Lukuman Wahab
Software Mentions: 2
Published: almost 4 years ago
10.1002/ehf2.12081
Chronic hypoxia down-regulates tight junction protein ZO-2 expression in children with cyanotic congenital heart defect
Cited by: 8
Author(s): Emma Jenkins, Massimo Caputo, Gianni Angelini, Mohamed Ghorbel
Software Mentions: 2
Published: about 9 years ago
10.3389/fnbeh.2015.00074
Neural circuits containing olfactory neurons are involved in the prepulse inhibition of the startle reflex in rats
Cited by: 3
Author(s): Haichen Niu, Xiaobin He, Ting Zhou, Xi Su, Qiang Zhang, Zhijian Zhang, Yuehua Qiao, Fuqiang Xu, Min Hu
Software Mentions: 2
Published: over 9 years ago
10.3389/fmicb.2020.612528
Effect of Lactic Acid Bacteria Addition on the Microbiological Safety of Pasta-Filata Types of Cheeses
Cited by: 10
Author(s): Alžbeta Medveďová, Martina Koňuchová, Karolína Kvočiková, Ivana Hatalová, Ľubomír Valík
Software Mentions: 2
Published: about 4 years ago
10.1016/j.gpb.2020.02.001
MSIsensor-pro: Fast, Accurate, and Matched-normal-sample-free Detection of Microsatellite Instability
Cited by: 46
Author(s): Peng Jia, Xiaofei Yang, Li Guo, Bowen Liu, Jiadong Lin, Hao Liang, Jianyong Sun, Chengsheng Zhang, Kai Ye
Software Mentions: 2
Published: almost 5 years ago
10.1186/1757-4749-3-15
Comparative analyses of Campylobacter concisus strains reveal the genome of the reference strain BAA-1457 is not representative of the species
Cited by: 23
Author(s): Nadeem O. Kaakoush, Nandan P. Deshpande, Marc R. Wilkins, Mark J. Raftery, Karolina Janitz, Hazel M. Mitchell
Software Mentions: 2
Published: about 13 years ago
10.1155/2016/5427526
Application of Multivariable Analysis and FTIR-ATR Spectroscopy to the Prediction of Properties in Campeche Honey
Cited by: 27
Author(s): Francisco Anguebes, Lucio Alberto Pat Fernández, A. Bassam, Armando Gómez-Guerrero, Atl V. Córdova, Mohamed Abatal, José P Garduza
Software Mentions: 2
Published: almost 9 years ago
10.1186/1423-0127-19-80
Daidzein induces neuritogenesis in DRG neuronal cultures
Cited by: 21
Author(s): Shih‐Hung Yang, Chih Chen Liao, Ying Chen, Jhih Pu Syu, Cherng-Jye Jeng, Seu Mei Wang
Software Mentions: 2
Published: over 12 years ago
10.1038/s41598-018-28912-x
Subcellular Imaging of Liquid Silicone Coated-Intestinal Epithelial Cells
Cited by: 4
Author(s): Peter N. Nirmalraj, Roman Lehner, Damien Thompson, Barbara Rothen‐Rutishauser, Michael Mayer
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-020-72779-w
Glucocorticoid-induced cell-derived matrix modulates transforming growth factor β2 signaling in human trabecular meshwork cells
Cited by: 15
Author(s): Felix Yemanyi, Janice A. Vranka, Vijay Krishna Raghunathan
Software Mentions: 2
Published: about 4 years ago
10.1155/2014/831435
Analysis of Glass-Reinforced Epoxy Material for Radio Frequency Resonator
Cited by: 1
Author(s): Muhammad Zaman, Mohammad Tariqul Islam, Norbahiah Misran, Baharudin Yatim
Software Mentions: 2
Published: almost 11 years ago
10.1155/2017/4826385
An Automatic Image Processing System for Glaucoma Screening
Cited by: 19
Author(s): Ahmed Almazroa, Sami Alodhayb, Kaamran Raahemifar, Vasudevan Lakshminarayanan
Software Mentions: 2
Published: almost 8 years ago
10.3390/ijerph18189872
Children Learn, Children Do! Results of the “Planning Health in School”, a Behavioural Change Programme
Cited by: 5
Author(s): Margarida Vieira, Graça Simões de Carvalho
Software Mentions: 2
Published: over 3 years ago