cran: phytools | Projects | Ecosyste.ms: Papers

10.1098/rsos.150636

Temporal and phylogenetic evolution of the sauropod dinosaur body plan
Cited by: 45
Author(s): Karl T. Bates, Philip D. Mannion, Peter L. Falkingham, Stephen L. Brusatte, John R. Hutchinson, Alejandro Otero, William I. Sellers, Corwin Sullivan, Kent A. Stevens, Vivian Allen
Software Mentions: 4
Published: over 8 years ago

10.3389/fphys.2020.00312

Living on the Edge: Physiological and Kinetic Trade-Offs Shape Thermal Tolerance in Intertidal Crabs From Tropical to Sub-Antarctic South America
Cited by: 7
Author(s): Samuel Coelho Faria, Adalto Bianchini, Mariana Machado Lauer, Ana Lúcia Ribeiro Latorre Zimbardi, Federico Tapella, M. Carolina Romero, John Campbell McNamara
Software Mentions: 4
Published: over 4 years ago

10.3389/fpls.2021.648026

Clarifying Recent Adaptive Diversification of the Chrysanthemum-Group on the Basis of an Updated Multilocus Phylogeny of Subtribe Artemisiinae (Asteraceae: Anthemideae)
Cited by: 10
Author(s): Chen Shen, Chujie Zhang, Jie Chen, Yanping Guo
Software Mentions: 4
Published: over 3 years ago

10.1128/mBio.00802-17

Evolution of the Staphylococcus argenteus ST2250 Clone in Northeastern Thailand Is Linked with the Acquisition of Livestock-Associated Staphylococcal Genes
Cited by: 37
Author(s): Danesh Moradigaravand, Dorota Jamrozy, Rafal Mostowy, Annaliesa S. Anderson, Emma K. Nickerson, Janjira Thaipadungpanit, Vanaporn Wuthiekanun, Direk Limmathurotsakul, Sarunporn Tandhavanant, Chanthiwa Wikraiphat, Gumphol Wongsuvan, Nittaya Teerawattanasook, Yaowaruk Jutrakul, Nuttiya Srisurat, Prajuab Chaimanee, T. Eoin West, Beth Blane, Julian Parkhill, Narisara Chantratita, Sharon J. Peacock
Software Mentions: 4
Published: about 7 years ago

10.1098/rsbl.2014.1053

Functional coupling constrains craniofacial diversification in Lake Tanganyika cichlids
Cited by: 10
Author(s): Masahito Tsuboi, Alejandro González-Voyer, Niclas Kolm
Software Mentions: 4
Published: over 9 years ago

10.1073/pnas.2003407117

Integrated chromosomal and plasmid sequence analyses reveal diverse modes of carbapenemase gene spread among Klebsiella pneumoniae
Cited by: 76
Author(s): Sophia David, Victoria Cohen, Sandra Reuter, Anna E. Sheppard, Tommaso Giani, Julian Parkhill, Gian María Rossolini, Edward J. Feil, Hajo Grundmann, David M. Aanensen
Software Mentions: 4
Published: about 4 years ago

10.3390/toxins9030103

How the Cobra Got Its Flesh-Eating Venom: Cytotoxicity as a Defensive Innovation and Its Co-Evolution with Hooding, Aposematic Marking, and Spitting
Cited by: 72
Author(s): Nadya Panagides, Timothy N. W. Jackson, Maria P. Ikonomopoulou, Kevin Arbuckle, Rudolf Pretzler, Daryl C. Yang, Syed Abid Ali, Ivan Koludarov, James Dobson, Brittany Sanker, Angelique K. Asselin, Renan Castro Santana, Iwan Hendrikx, Harold van der Ploeg, Jeremie Tai-A-Pin, Romilly van den Bergh, Harald M. I. Kerkkamp, Freek J. Vonk, Arno Naude, Morné Strydom, Louis Jacobsz, Nathan Dunstan, Marc Jaeger, Wayne C. Hodgson, John J. Miles, Bryan G. Fry
Software Mentions: 4
Published: over 7 years ago

10.1098/rspb.2020.2512

Evolutionary trade-offs between male secondary sexual traits revealed by a phylogeny of the hyperdiverse tribe Eumaeini (Lepidoptera: Lycaenidae)
Cited by: 8
Author(s): Wendy A Valencia-Montoya, Tiago B. Quental, João Filipe Riva Tonini, Gerard Talavera, James D. Crall, Gerardo Lamas, Robert C. Busby, Ana Paula S. Carvalho, Ana Beatriz Barros de Morais, Nicolás Oliveira Mega, Helena Piccoli Romanowski, Marjorie A. Liénard, Shayla Salzman, Melissa R. L. Whitaker, Akito Y. Kawahara, David J. Lohman, Robert K. Robbins, Naomi E. Pierce
Software Mentions: 4
Published: over 3 years ago

10.1098/rspb.2020.2593

Darwin's vexing contrivance: a new hypothesis for why some flowers have two kinds of anther
Cited by: 10
Author(s): Kathleen M. Kay, Tania Jogesh, Diana Tataru, Sami Akiba
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12862-018-1142-0

Phylogenomics provides a robust topology of the major cnidarian lineages and insights on the origins of key organismal traits
Cited by: 151
Author(s): Ehsan Kayal, Bastian Bentlage, M. Sabrina Pankey, Aki Ohdera, Mónica Medina, David C. Plachetzki, Allen G. Collins, Joseph F. Ryan
Software Mentions: 4
Published: over 6 years ago

10.3390/toxins10120516

Coagulotoxic Cobras: Clinical Implications of Strong Anticoagulant Actions of African Spitting Naja Venoms That Are Not Neutralised by Antivenom but Are by LY315920 (Varespladib)
Cited by: 68
Author(s): Mátyás A. Bittenbinder, Christina N. Zdenek, Bianca op den Brouw, Nicholas J. Youngman, James Dobson, Arno Naude, Freek J. Vonk, Bryan G. Fry
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-017-09566-7

Comparison of musculoskeletal networks of the primate forelimb
Cited by: 13
Author(s): Júlia Molnár, Borja Esteve‐Altava, Campbell Rolian, Rui Diogo
Software Mentions: 4
Published: about 7 years ago

10.1093/gbe/evaa068

Vertebrate Lineages Exhibit Diverse Patterns of Transposable Element Regulation and Expression across Tissues
Cited by: 24
Author(s): Giulia I M Pasquesi, Blair W. Perry, Mike W. Vandewege, Robert P. Ruggiero, Drew R. Schield, Todd A. Castoe
Software Mentions: 4
Published: over 4 years ago

10.1038/s41597-020-0363-4

Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis
Cited by: 20
Author(s): Thomas Hackl, Roman Martin, Karina Barenhoff, Sarah Duponchel, Dominik Heider, Matthias Fischer
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-017-09415-7

Evolutionary morphology of the lizard chemosensory system
Cited by: 25
Author(s): Simon Baeckens, Anthony Herrel, Chris Broeckhoven, Menelia Vasilopoulou‐Kampitsi, Katleen Huyghe, Jana Goyens, Raoul Van Damme
Software Mentions: 3
Published: about 7 years ago

10.1038/s41598-017-08989-6

Intense natural selection preceded the invasion of new adaptive zones during the radiation of New World leaf-nosed bats
Cited by: 40
Author(s): Daniela M. Rossoni, Ana Paula A. Assis, Norberto P. Giannini, Gabriel Marroig
Software Mentions: 3
Published: about 7 years ago

10.1038/s41598-018-26062-8

Sociality does not drive the evolution of large brains in eusocial African mole-rats
Cited by: 36
Author(s): Kristina Kverková, Tereza Bělíková, Seweryn Olkowicz, Zuzana Pavelková, M. Justin O’Riain, Radim Šumbera, Hynek Burda, Nigel C. Bennett, Pavel Němec
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-019-55621-w

Evolutionary diversity in tropical tree communities peaks at intermediate precipitation
Cited by: 36
Author(s): Danilo M. Neves, Kyle G. Dexter, Timothy R. Baker, Fernanda Coelho de Souza, Ary Teixeira de Oliveira‐Filho, Luciano Paganucci de Queiroz, Haroldo C. de Lima, Marcelo F. Simon, Gwilym P. Lewis, Rocío Cortés, Luzmila Arroyo, Carlos Reynel, José Luis Marcelo-Peña, Isau Huamantupa‐Chuquimaco, Daniel Villarroel, Germaine Alexander Parada, Aniceto Daza, Reynaldo Linares-Palomino, Leandro Valle Ferreira, Rafael de Paiva Salomão, Geovane Souza Siqueira, Marcelo Trindade Nascimento, Cláudio Nicoletti de Fraga, R. Toby Pennington
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-020-76757-0

A test of the lateral semicircular canal correlation to head posture, diet and other biological traits in “ungulate” mammals
Cited by: 15
Author(s): Julien Benoît, Lucas J. Legendre, Andrew A. Farke, James M. Neenan, Bastien Mennecart, Loïc Costeur, S. Mérigeaud, Paul R. Manger
Software Mentions: 3
Published: about 4 years ago

10.1038/s41598-021-96842-2

Genomic comparisons and phylogenetic analysis of mastitis-related staphylococci with a focus on adhesion, biofilm, and related regulatory genes
Cited by: 6
Author(s): Lucas José Luduverio Pizauro, Camila Chioda de Almeida, Saura R. Silva, Janet I. MacInnes, Andrew M. Kropinski, L. F. Zafalon, Fernando Antônio de Ávila, Alessandro de Mello Varani
Software Mentions: 3
Published: about 3 years ago

10.3390/toxins12030201

Fangs for the Memories? A Survey of Pain in Snakebite Patients Does Not Support a Strong Role for Defense in the Evolution of Snake Venom Composition
Cited by: 18
Author(s): Harry Ward-Smith, Kevin Arbuckle, Arno Naude, Wolfgang Wüster
Software Mentions: 3
Published: over 4 years ago

10.1128/mBio.01341-17

Associations among Antibiotic and Phage Resistance Phenotypes in Natural and Clinical Escherichia coli Isolates
Cited by: 34
Author(s): Richard C. Allen, Katia R. Pfrunder‐Cardozo, Dominik M. Meinel, Adrian Egli, Alex R. Hall
Software Mentions: 3
Published: about 7 years ago

10.1038/s41396-019-0446-4

Linking the resistome and plasmidome to the microbiome
Cited by: 157
Author(s): Thibault Stalder, Maximilian O. Press, Shawn Sullivan, Ivan Liachko, Eva M. Top
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.37621

Strong biomechanical relationships bias the tempo and mode of morphological evolution
Cited by: 34
Author(s): Martha M. Muñoz, Yinan Hu, Philip S. L. Anderson, S. N. Patek
Software Mentions: 3
Published: over 6 years ago

10.3390/ijms21113952

Genomic Analysis of Vavilov’s Historic Chickpea Landraces Reveals Footprints of Environmental and Human Selection
Cited by: 9
Author(s): Alena Sokolkova, С. В. Булынцев, Peter L. Chang, Noelia Carrasquilla‐Garcia, Anna A. Igolkina, Nina Noujdina, Eric von Wettberg, M. A. Vishnyakova, Douglas R. Cook, Sergey V. Nuzhdin, Maria Samsonova
Software Mentions: 3
Published: over 4 years ago

10.3390/microorganisms7110576

Phylogeny of Anoxygenic Photosynthesis Based on Sequences of Photosynthetic Reaction Center Proteins and a Key Enzyme in Bacteriochlorophyll Biosynthesis, the Chlorophyllide Reductase
Cited by: 26
Author(s): Johannes F. Imhoff, Tanja Rahn, Sven Künzel, Sven C. Neulinger
Software Mentions: 3
Published: about 5 years ago

10.1093/molbev/msab179

Heterogeneous Histories of Recombination Suppression on Stickleback Sex Chromosomes
Cited by: 19
Author(s): Jason M. Sardell, Matthew P. Josephson, Anne C. Dalziel, Catherine L. Peichel, Mark Kirkpatrick
Software Mentions: 3
Published: over 3 years ago

10.7717/peerj.11805

The phylogenetic relationships of geoemydid turtles from the Eocene Messel Pit Quarry: a first assessment using methods for continuous and discrete characters
Cited by: 2
Author(s): Eduardo Ascarrunz, Claude Julien, Walter G. Joyce
Software Mentions: 3
Published: over 3 years ago

10.7717/peerj.3634

Littorally adaptive? Testing the link between habitat, morphology, and reproduction in the intertidal sculpin subfamily Oligocottinae (Pisces: Cottoidea)
Cited by: 17
Author(s): Thaddaeus John Buser, Michael D. Burns, J. Andrés López
Software Mentions: 3
Published: over 7 years ago

10.7717/peerj.4722

The brown anole dewlap revisited: do predation pressure, sexual selection, and species recognition shape among-population signal diversity?
Cited by: 9
Author(s): Simon Baeckens, Tess Driessens, Raoul Van Damme
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pntd.0007463

Identification of positively selected genes in human pathogenic treponemes: Syphilis-, yaws-, and bejel-causing strains differ in sets of genes showing adaptive evolution
Cited by: 9
Author(s): Denisa Maděránková, Lenka Mikalová, Michal Strouhal, Šimon Vadják, Ivana Kuklová, Petra Pospíšilová, Lenka Krbková, Pavlína Koščová, Ivo Provazník, David Šmajs
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0222718

Widespread chytrid infection across frogs in the Peruvian Amazon suggests critical role for low elevation in pathogen spread and persistence
Cited by: 8
Author(s): Imani D. Russell, Joanna G. Larson, Rudolf von May, Iris Holmes, Timothy Y. James, Alison R. Davis Rabosky
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0213694

Braincase simplification and the origin of lissamphibians
Cited by: 6
Author(s): Jade B. Atkins, Robert R. Reisz, Hillary C. Maddin
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0226136

Melanism evolution in the cat family is influenced by intraspecific communication under low visibility
Cited by: 16
Author(s): Maurício Eduardo Graipel, Juliano André Bogoni, Eduardo Luís Hettwer Giehl, Felipe O. Cerezer, Nilton C. Cáceres, Eduardo Eizirik
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0156973

Keeping All the PIECES: Phylogenetically Informed Ex Situ Conservation of Endangered Species
Cited by: 13
Author(s): Daniel J. Larkin, Sarah K. Jacobi, Andrew L. Hipp, Andrea T. Kramer
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0172879

Stable isotope ecology of a hyper-diverse community of scincid lizards from arid Australia
Cited by: 7
Author(s): Maggie R. Grundler, Eric R. Pianka, Nicolás Pelegrín, Mark A. Cowan, Daniel L. Rabosky
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0103252

Does Land-Use Intensification Decrease Plant Phylogenetic Diversity in Local Grasslands?
Cited by: 20
Author(s): Eugen Egorov, Daniel Prati, Walter Durka, Stefan G. Michalski, Markus Fischer, Barbara Schmitt, Stefan Blaser, Martin Brändle
Software Mentions: 3
Published: over 10 years ago

10.1186/s12862-016-0843-5

Variation in cyanogenic compounds concentration within a Heliconius butterfly community: does mimicry explain everything?
Cited by: 18
Author(s): Mónica Arias, Aimilia Meichanetzoglou, Marianne Élias, Neil Rosser, Dunnya De‐Silva, Bastien Nay, Violaine Llaurens
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0173734

Evolutionary and biogeographical implications of degraded LAGLIDADG endonuclease functionality and group I intron occurrence in stony corals (Scleractinia) and mushroom corals (Corallimorpharia)
Cited by: 14
Author(s): Juan Sebastián Celis, David R. Edgell, Björn Stelbrink, Daniel Wibberg, Torsten Hauffe, Jochen Blom, Jörn Kalinowski, Thomas Wilke
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0112610

Major Evolutionary Trends in Hydrogen Isotope Fractionation of Vascular Plant Leaf Waxes
Cited by: 76
Author(s): Li Gao, Erika J. Edwards, Yongbo Zeng, Yongsong Huang
Software Mentions: 3
Published: about 10 years ago

10.1186/s12862-017-1098-5

Rates of morphological evolution, asymmetry and morphological integration of shell shape in scallops
Cited by: 29
Author(s): Emma Sherratt, Jeanne M. Serb, Dean C. Adams
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0073535

Evolutionary Origin of the Scombridae (Tunas and Mackerels): Members of a Paleogene Adaptive Radiation with 14 Other Pelagic Fish Families
Cited by: 130
Author(s): Masaki Miya, Matt Friedman, Taku Satoh, Hirohiko Takeshima, Tetsuya Sadõ, Wataru Iwasaki, Yusuke Yamanoue, Masanori Nakatani, Kohji Mabuchi, Jun Inoue, Jan Yde Poulsen, Tsukasa Fukunaga, Yukuto Sato, Mutsumi Nishida
Software Mentions: 3
Published: about 11 years ago

10.1093/aobpla/plu078

Introduced and invasive cactus species: a global review
Cited by: 122
Author(s): Ana Novoa, Johannes J. Le Roux, Mark P. Robertson, John R. Wilson, David M. Richardson
Software Mentions: 3
Published: almost 10 years ago

10.1002/ece3.4426

Evolution of ontogenic change in color defenses of swallowtail butterflies
Cited by: 23
Author(s): Nikhil Gaitonde, Jahnavi Joshi, Krushnamegh Kunte
Software Mentions: 3
Published: about 6 years ago

10.1002/ece3.2895

Complex trait relationships between leaves and absorptive roots: Coordination in tissue N concentration but divergence in morphology
Cited by: 28
Author(s): Ruili Wang, Qiufeng Wang, Ning Zhao, Guirui Yu, Nianpeng He
Software Mentions: 3
Published: over 7 years ago

10.1002/ece3.3068

Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation
Cited by: 63
Author(s): Jinshi Xu, Changming Yu, Lixia Zhang, Yimin Chai, Mao Wang, Yaoxin Guo, Ting Li, Ming Yue
Software Mentions: 3
Published: over 7 years ago

10.1002/ece3.2385

The influence of variability in species trait data on community‐level ecological prediction and inference
Cited by: 9
Author(s): Karen M. Alofs
Software Mentions: 3
Published: over 8 years ago

10.1002/ece3.5507

Quantifying shape and ecology in avian pedal claws: The relationship between the bony core and keratinous sheath
Cited by: 18
Author(s): Brandon P Hedrick, Samantha A. Cordero, Lindsay E. Zanno, Christopher R. Noto, Peter Dodson
Software Mentions: 3
Published: about 5 years ago

10.1186/s12862-018-1308-9

Seed size evolution and biogeography of Plukenetia (Euphorbiaceae), a pantropical genus with traditionally cultivated oilseed species
Cited by: 16
Author(s): Warren M. Cardinal‐McTeague, Kenneth J. Wurdack, Erin M. Sigel, Lynn J. Gillespie
Software Mentions: 3
Published: almost 6 years ago

10.1002/ece3.4785

Body mass as a supertrait linked to abundance and behavioral dominance in hummingbirds: A phylogenetic approach
Cited by: 15
Author(s): Rafael Bribiesca, Leonel Herrera‐Alsina, Eduardo Ruíz-Sánchez, Luis A. Sánchez‐González, Jorge E. Schondube
Software Mentions: 3
Published: almost 6 years ago

10.1186/s42523-020-00034-8

Microbial symbiosis and coevolution of an entire clade of ancient vertebrates: the gut microbiota of sea turtles and its relationship to their phylogenetic history
Cited by: 23
Author(s): T. Franciscus Scheelings, Robert J. Moore, Thi Thu Hao Van, Marcel Klaassen, Richard D. Reina
Software Mentions: 3
Published: over 4 years ago

10.1002/ece3.1617

Ecological connectivity assessment in a strongly structured fire salamander (Salamandra salamandra) population
Cited by: 20
Author(s): Luciano Bani, Giulia Di Pisa, Massimiliano Luppi, Giulia Spilotros, Elena Fabbri, Ettore Randi, Valerio Orioli
Software Mentions: 3
Published: over 9 years ago

10.1186/s12862-016-0846-2

The measure of success: geographic isolation promotes diversification in Pachydactylus geckos
Cited by: 25
Author(s): Matthew P. Heinicke, Todd R. Jackman, Aaron M. Bauer
Software Mentions: 3
Published: almost 8 years ago

10.1186/s12862-015-0358-5

The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record
Cited by: 167
Author(s): Allison Y. Hsiang, Daniel J. Field, Timothy H. Webster, Adam D.B. Behlke, Matthew Davis, Rachel A. Racicot, Jacques A. Gauthier
Software Mentions: 3
Published: over 9 years ago

10.1002/ece3.633

Lake Malawi cichlid evolution along a benthic/limnetic axis
Cited by: 69
Author(s): C. Darrin Hulsey, Richard J. Roberts, Y.-H. E. Loh, Maxwell Friedrich Rupp, J. Todd Streelman
Software Mentions: 3
Published: over 11 years ago

10.1186/s12862-015-0425-y

Cytotype diversity and genome size variation in Knautia (Caprifoliaceae, Dipsacoideae)
Cited by: 29
Author(s): Božo Frajman, Ivana Rešetnik, Hanna Weiss‐Schneeweiss, Friedrich Ehrendorfer
Software Mentions: 3
Published: over 9 years ago

10.1186/1471-2148-13-53

Ontogenetic development of intestinal length and relationships to diet in an Australasian fish family (Terapontidae)
Cited by: 32
Author(s): Aaron M. Davis, Peter J. Unmack, Bradley James Pusey, Richard G. Pearson, David L. Morgan
Software Mentions: 3
Published: almost 12 years ago

10.1002/evl3.185

Plasticity leaves a phenotypic signature during local adaptation
Cited by: 51
Author(s): Reinder Radersma, Daniel W. A. Noble, Tobias Uller
Software Mentions: 3
Published: over 4 years ago

10.1093/emph/eoaa005

An African origin for Mycobacterium bovis
Cited by: 35
Author(s): Chloé Loiseau, Fabrizio Menardo, Abraham Aseffa, Elena Hailu, Balako Gumi, Gobena Ameni, Stefan Berg, Leen Rigouts, Suelee Robbe‐Austerman, Jakob Zinsstag, Sébastien Gagneux, Daniela Brites
Software Mentions: 3
Published: almost 5 years ago

10.1111/evo.13741

Physiological evolution during adaptive radiation: A test of the island effect in Anolis lizards
Cited by: 21
Author(s): Jhan C. Salazar, María del Rosario Castañeda, Gustavo A. Londoño, Brooke L. Bodensteiner, Martha M. Muñoz
Software Mentions: 3
Published: over 5 years ago

10.1111/evo.12556

Comparative support for the expensive tissue hypothesis: Big brains are correlated with smaller gut and greater parental investment in Lake Tanganyika cichlids
Cited by: 77
Author(s): Masahito Tsuboi, Arild Husby, Alexander Kotrschal, Alexander Hayward, Séverine D. Buechel, Josefina Zidar, Hanne Løvlie, Niclas Kolm
Software Mentions: 3
Published: almost 10 years ago

10.3389/fgene.2020.00526

Rates and Rocks: Strengths and Weaknesses of Molecular Dating Methods
Cited by: 15
Author(s): Stéphane Guindon
Software Mentions: 3
Published: over 4 years ago

10.3389/fgene.2015.00004

Global DNA cytosine methylation as an evolving trait: phylogenetic signal and correlated evolution with genome size in angiosperms
Cited by: 84
Author(s): Conchita Alonso, Rocío Silva Pérez, Pilar Bazaga, Carlos M. Herrera
Software Mentions: 3
Published: almost 10 years ago

10.3389/fgene.2018.00081

Karyotypic Diversity and Evolution in a Sympatric Assemblage of Neotropical Electric Knifefish
Cited by: 6
Author(s): Adauto Lima Cardoso, Júlio César Pieczarka, William G. R. Crampton, Jonathan Stuart Ready, Wilsea M. B. de Figueiredo Ready, Joseph C. Waddell, Jonas Alves de Oliveira, Cleusa Yoshiko Nagamachi
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2019.02019

Population Genomics of an Obligately Halophilic Basidiomycete Wallemia ichthyophaga
Cited by: 8
Author(s): Cene Gostinčar, Xiaohuan Sun, Janja Zajc, Chao Fang, Yong Hou, Yonglun Luo, Nina Gunde‐Cimerman, Zewei Song
Software Mentions: 3
Published: about 5 years ago

10.3389/fnana.2015.00102

Diversity in olfactory bulb size in birds reflects allometry, ecology, and phylogeny
Cited by: 76
Author(s): Jeremy R. Corfield, Kasandra Price, Andrew N. Iwaniuk, Cristian Gutiérrez-Ibáñez, Tim R. Birkhead, Douglas R. Wylie
Software Mentions: 3
Published: over 9 years ago

10.3389/fpls.2020.01295

Early Diverging and Core Bromelioideae (Bromeliaceae) Reveal Contrasting Patterns of Genome Size Evolution and Polyploidy
Cited by: 7
Author(s): Juraj Paule, Sascha Heller, Jefferson Rodrigues Maciel, Raquel Fernandes Monteiro, Elton M. C. Leme, Georg Zizka
Software Mentions: 3
Published: about 4 years ago

10.3389/fpls.2018.01775

Evolution of Plant Architecture, Functional Diversification and Divergent Evolution in the Genus Atractocarpus (Rubiaceae) for New Caledonia
Cited by: 14
Author(s): David Bruy, Tom Hattermann, Laure Barrabé, Arnaud Mouly, Daniel Barthélémy, Sandrine Isnard
Software Mentions: 3
Published: almost 6 years ago

10.3389/fpls.2019.00294

Temporal Changes in Species, Phylogenetic, and Functional Diversity of Temperate Tree Communities: Insights From Assembly Patterns
Cited by: 13
Author(s): Jung Hwa Chun, Chang Bae Lee
Software Mentions: 3
Published: over 5 years ago

10.1186/s12864-019-6330-9

Human protein-RNA interaction network is highly stable across mammals
Cited by: 8
Author(s): Aarthi Ramakrishnan, Sarath Chandra Janga
Software Mentions: 3
Published: almost 5 years ago

10.3390/genes12091347

Genome Size Dynamics in Marine Ribbon Worms (Nemertea, Spiralia)
Cited by: 1
Author(s): Juraj Paule, Jörn von Döhren, Christina Sagorny, Maria A. Nilsson
Software Mentions: 3
Published: about 3 years ago

10.1186/s13059-016-1059-0

Widespread natural variation of DNA methylation within angiosperms
Cited by: 398
Author(s): Chad E. Niederhuth, Adam J. Bewick, Lexiang Ji, Magdy S. Alabady, Kyung Do Kim, Qing Li, Nicholas A. Rohr, Aditi Rambani, John M. Burke, Joshua A. Udall, Chiedozie Egesi, Jeremy Schmutz, Jane Grimwood, Scott A. Jackson, Nathan M. Springer, Robert J. Schmitz
Software Mentions: 3
Published: about 8 years ago

10.1093/gbe/evy096

Well-Annotated microRNAomes Do Not Evidence Pervasive miRNA Loss
Cited by: 38
Author(s): James E. Tarver, Richard S. Taylor, Mark N. Puttick, Graeme T. Lloyd, Walker Pett, Bastian Fromm, Bettina E. Schirrmeister, Davide Pisani, Kevin J. Peterson, Philip C. J. Donoghue
Software Mentions: 3
Published: over 6 years ago

10.1093/gbe/evaa095

Molecular Evolutionary Analysis of Nematode Zona Pellucida (ZP) Modules Reveals Disulfide-Bond Reshuffling and Standalone ZP-C Domains
Cited by: 3
Author(s): Cameron J. Weadick
Software Mentions: 3
Published: over 4 years ago

10.1007/s00040-017-0572-9

White-gutted soldiers: simplification of the digestive tube for a non-particulate diet in higher Old World termites (Isoptera: Termitidae)
Cited by: 11
Author(s): Rudolf H. Scheffrahn, Thomas Bourguignon, Christian Bordereau, R. Adriana Hernández‐Aguilar, Vicky M. Oelze, Paula Dieguez, Jan Šobotník, Alejandra Pascual‐Garrido
Software Mentions: 3
Published: over 7 years ago

10.1186/s13104-019-4577-5

Treehouse: a user-friendly application to obtain subtrees from large phylogenies
Cited by: 14
Author(s): Jacob L. Steenwyk, Antonis Rokas
Software Mentions: 3
Published: about 5 years ago

10.1080/19336896.2020.1720486

Predicting the spread-risk potential of chronic wasting disease to sympatric ungulate species
Cited by: 16
Author(s): Catherine I. Cullingham, Rhiannon Peery, Anh Dao, David W. Coltman
Software Mentions: 3
Published: almost 5 years ago

10.3897/BDJ.9.e59913

The Hummingbird Collection of the Natural History and Science Museum of the University of Porto (MHNC-UP), Portugal
Cited by: 1
Author(s): Ricardo J. Lopes, Pedro Faria, Daniela Gomes, Bárbara Freitas, Judit Málinger
Software Mentions: 3
Published: over 3 years ago

10.1186/s13062-015-0073-6

Tradeoff between robustness and elaboration in carotenoid networks produces cycles of avian color diversification
Cited by: 21
Author(s): Alexander V. Badyaev, Erin S. Morrison, Virginia Belloni, Michael J. Sanderson
Software Mentions: 3
Published: over 9 years ago

10.1098/rspb.2017.2628

Macroevolutionary patterning of woodpecker drums reveals how sexual selection elaborates signals under constraint
Cited by: 34
Author(s): Meredith C. Miles, Eric R. Schuppe, R. Miller Ligon, Matthew J. Fuxjager
Software Mentions: 3
Published: over 6 years ago

10.1098/rspb.2019.2474

Evolution of a multifunctional trait: shared effects of foraging ecology and thermoregulation on beak morphology, with consequences for song evolution
Cited by: 48
Author(s): Nicholas R. Friedman, Eliot T. Miller, Jason Ball, Haruka Kasuga, Vladimír Remeš, Evan P. Economo
Software Mentions: 3
Published: almost 5 years ago

10.1098/rspb.2020.0598

Fire and grazing determined grasslands of central Madagascar represent ancient assemblages
Cited by: 40
Author(s): Cédrique L. Solofondranohatra, Maria S. Vorontsova, Gareth P. Hempson, Jan Hackel, Stuart Cable, Vololoniaina Jeannoda, Caroline E. R. Lehmann
Software Mentions: 3
Published: over 4 years ago

10.1098/rspb.2021.0823

Climate variability and parent nesting strategies influence gas exchange across avian eggshells
Cited by: 8
Author(s): Marie R. G. Attard, Steven J. Portugal
Software Mentions: 3
Published: over 3 years ago

10.1098/rsos.170293

Bioclimatic niches are conserved and unrelated to pollination syndromes in Antillean Gesneriaceae
Cited by: 5
Author(s): Hermine Alexandre, Julie Faure, Steven Ginzbarg, John L. Clark, Simon Joly
Software Mentions: 3
Published: about 7 years ago

10.1098/rsbl.2019.0398

Loss of developmental diapause as prerequisite for social evolution in bees
Cited by: 31
Author(s): Priscila Karla Ferreira Santos, Maria Cristina Arias, Karen M. Kapheim
Software Mentions: 3
Published: over 5 years ago

10.1098/rsos.181317

Mechanical significance of morphological variation in diprotodont incisors
Cited by: 3
Author(s): Philip James Rencher Morris, Philip G. Cox, Samuel N. Cobb
Software Mentions: 3
Published: over 5 years ago

10.1098/rsbl.2018.0064

Non-uniform evolutionary response of gecko eye size to changes in diel activity patterns
Cited by: 12
Author(s): Lars Schmitz, Timothy E. Higham
Software Mentions: 3
Published: over 6 years ago

10.1098/rsos.201940

Brain size predicts learning abilities in bees
Cited by: 6
Author(s): Miguel Ángel Collado, Cristina M. Montaner, Francisco P. Molina, Daniel Sol, Ignasi Bartomeus
Software Mentions: 3
Published: over 3 years ago

10.3390/nu12113247

Comparative Genome Analysis of Bifidobacterium longum subsp. infantis Strains Reveals Variation in Human Milk Oligosaccharide Utilization Genes among Commercial Probiotics
Cited by: 40
Author(s): Rebbeca M. Duar, Giorgio Casaburi, Ryan D. Mitchell, Lindsey N C Scofield, Camila A. Ortega Ramírez, Daniela Barile, Bethany M. Henrick, Steven A. Frese
Software Mentions: 2
Published: about 4 years ago

10.1093/aobpla/plu066

When Michaelis and Menten met Holling: towards a mechanistic theory of plant nutrient foraging behaviour
Cited by: 22
Author(s): Gordon G. McNickle, Joel S. Brown
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12915-018-0559-7

Ontogenetic and phylogenetic simplification during white stripe evolution in clownfishes
Cited by: 34
Author(s): Pauline Salis, Natacha Roux, Olivier Soulat, David Lecchini, Vincent Laudet, Bruno Frédérich
Software Mentions: 2
Published: about 6 years ago

10.1186/s12862-021-01754-4

Trophic specialisation reflected by radular tooth material properties in an “ancient” Lake Tanganyikan gastropod species flock
Cited by: 16
Author(s): Wencke Krings, Marco T. Neiber, Alexander Kovalev, Stanislav N. Gorb, Matthias Glaubrecht
Software Mentions: 2
Published: over 3 years ago

10.1186/s12862-018-1133-1

Macroevolutionary diversification with limited niche disparity in a species-rich lineage of cold-climate lizards
Cited by: 19
Author(s): Ashley M. Reaney, Mónica Saldarriaga‐Córdoba, Daniel Pincheira‐Donoso
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12862-017-0967-2

Evolutionary radiations in the species-rich mountain genus Saxifraga L.
Cited by: 41
Author(s): Jana Ebersbach, Jan Schnitzler, Adrien Favre, Alexandra N. Muellner‐Riehl
Software Mentions: 2
Published: over 7 years ago

10.1186/1471-2148-14-39

Phenotypic integration of brain size and head morphology in Lake Tanganyika Cichlids
Cited by: 25
Author(s): Masahito Tsuboi, Alejandro Gonzalez‐Voyer, Niclas Kolm
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12862-019-1509-x

Accelerated evolution and diversifying selection drove the adaptation of cetacean bone microstructure
Cited by: 4
Author(s): Di Sun, Xuming Zhou, Zhenpeng Yu, Shixia Xu, Inge Seim, Guang Yang
Software Mentions: 2
Published: about 5 years ago

10.1186/s12862-019-1546-5

Fruit syndromes in Viburnum: correlated evolution of color, nutritional content, and morphology in bird-dispersed fleshy fruits
Cited by: 22
Author(s): Miranda Sinnott‐Armstrong, Chong Lee, Wendy L. Clement, Michael J. Donoghue
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12862-018-1152-y

Study of morphological variation of northern Neotropical Ariidae reveals conservatism despite macrohabitat transitions
Cited by: 9
Author(s): Madlen Stange, Gabriel Aguirre‐Fernández, Walter Salzburger, Marcelo R. Sánchez‐Villagra
Software Mentions: 2
Published: over 6 years ago

10.1186/s12870-018-1420-4

Molecular genetic and biochemical evidence for adaptive evolution of leaf abaxial epicuticular wax crystals in the genus Lithocarpus (Fagaceae)
Cited by: 5
Author(s): Chia‐Ling Yang, Bing Huang, Shao Wei Ho, Mingjie Huang, Jenn Che Wang, Jian Gao, Pei Chun Liao
Software Mentions: 2
Published: about 6 years ago

10.1186/s12870-017-1199-8

Negative correlation between rates of molecular evolution and flowering cycles in temperate woody bamboos revealed by plastid phylogenomics
Cited by: 25
Author(s): Ping Ma, Maria S. Vorontsova, Olinirina Prisca Nanjarisoa, Jacqueline Razanatsoa, Zhenhua Guo, Thomas Haevermans, Li D
Software Mentions: 2
Published: almost 7 years ago

Projects: cran: phytools

Papers Mentioning phytools 586