cran: phytools | Projects | Ecosyste.ms: Papers

10.7717/peerj.718

Intragenomic polymorphisms among high-copy loci: a genus-wide study of nuclear ribosomal DNA inAsclepias(Apocynaceae)
Cited by: 39
Author(s): Kevin Weitemier, Shannon C. K. Straub, Mark Fishbein, Aaron Liston
Software Mentions: 5
Published: almost 10 years ago

10.1186/s12862-021-01753-5

Rapid evolution and molecular convergence in cryptorchidism-related genes associated with inherently undescended testes in mammals
Cited by: 4
Author(s): Simin Chai, Ran Tian, Juanjuan Bi, Shixia Xu, Wenhua Ren
Software Mentions: 5
Published: almost 4 years ago

10.1371/journal.pone.0164532

The Evolutionary Basis of Naturally Diverse Rice Leaves Anatomy
Cited by: 23
Author(s): Jolly Chatterjee, Jacqueline Dionora, Abigail Elmido-Mabilangan, Samart Wanchana, Vivek Thakur, Anindya Bandyopadhyay, D. S. Brar, W. Paul Quick
Software Mentions: 5
Published: about 8 years ago

10.1038/s41598-019-41948-x

The role of the environment in the evolution of nest shape in Australian passerines
Cited by: 13
Author(s): Iliana Medina
Software Mentions: 5
Published: over 5 years ago

10.1093/iob/obab019

The Evolutionary History of Siphonophore Tentilla: Novelties, Convergence, and Integration
Cited by: 2
Author(s): Alejandro Damián-Serrano, Steven H. D. Haddock, Casey W. Dunn
Software Mentions: 5
Published: almost 4 years ago

10.1371/journal.pone.0099871

Species Divergence and Phylogenetic Variation of Ecophysiological Traits in Lianas and Trees
Cited by: 12
Author(s): Rodrigo S. Ríos, Cristian Salgado‐Luarte, Ernesto Gianoli
Software Mentions: 5
Published: over 10 years ago

10.1186/s12862-018-1169-2

Ecological opportunity may facilitate diversification in Palearctic freshwater organisms: a case study on hydrobiid gastropods
Cited by: 9
Author(s): Diana Delicado, Torsten Hauffe, Thomas Wilke
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0171870

Phylogenetic patterns and the adaptive evolution of osmoregulation in fiddler crabs (Brachyura, Uca)
Cited by: 25
Author(s): Samuel Coelho Faria, Diogo B. Provete, Carl L. Thurman, John Campbell McNamara
Software Mentions: 5
Published: almost 8 years ago

10.1371/journal.pone.0140761

Relation between Water Balance and Climatic Variables Associated with the Geographical Distribution of Anurans
Cited by: 25
Author(s): Braz Titon, Fernando Ribeiro Gomes
Software Mentions: 5
Published: about 9 years ago

10.1371/journal.pone.0244803

Trypanosoma (Herpetosoma) diversity in rodents and lagomorphs of New Mexico with a focus on epizootological aspects of infection in Southern Plains woodrats (Neotoma micropus)
Cited by: 0
Author(s): Irina Goodrich, Clifton McKee, Michael Kosoy
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-019-40822-0

Phylogeny and herbivory are related to avian cecal size
Cited by: 11
Author(s): Andrew Hunt, Layla Al‐Nakkash, Andrew H. Lee, Heather F. Smith
Software Mentions: 5
Published: over 5 years ago

10.1038/s41598-019-39853-4

Climate and symbioses with ants modulate leaf/stem scaling in epiphytes
Cited by: 1
Author(s): Guillaume Chomicki, Susanne S. Renner
Software Mentions: 5
Published: almost 6 years ago

10.1098/rspb.2016.1587

Evolutionary heritage influences Amazon tree ecology
Cited by: 44
Author(s): Fernanda Coelho de Souza, Kyle G. Dexter, Oliver L. Phillips, Roel Brienen, Jérôme Chave, David Galbraith, Gabriela Lopez‐Gonzalez, Abel Monteagudo Mendoza, R. Toby Pennington, Lourens Poorter, Miguel Alexiades, Esteban Álvarez-Dávila, Ana Andrade, L. E. O. C. Aragão, Alejandro Araujo‐Murakami, E.J.M.M. Arets, Gerardo A. Aymard C, Christopher Baraloto, Jorcely Barroso, Damien Bonal, René Boot, José L. Camargo, J. A. Comiskey, Fernando Cornejo Valverde, Plínio Barbosa de Camargo, Anthony Di Fiore, Fernando Elias, Terry L. Erwin, Ted R. Feldpausch, Leandro Valle Ferreira, Nikolaos M. Fyllas, Emanuel Gloor, Bruno Hérault, R. Herrera, Níro Higuchi, Eurídice N. Honorio Coronado, Timothy J. Killeen, William F. Laurance, Susan G. Laurance, J. Lloyd, Thomas Ε. Lovejoy, Yadvinder Malhi, Leandro Maracahipes, Beatriz Schwantes Marimon, Casimiro Mendoza, Paulo S. Morandi, David Neill, Percy Núñez Vargas, Edmar Almeida de Oliveira, Eddie Lenza, Walter A. Palacios, M. C. Peñuela, John J. Pipoly, Nigel C. A. Pitman, Adriana Prieto, Carlos Alberto Quesada, Hirma Ramírez‐Angulo, Agustín Rudas, Kalle Ruokolainen, Rafael de Paiva Salomão, Marcos Silveira, Juliana Stropp, Hans ter Steege, Raquel Thomas-Caesar, P. van der Hout, Geertje M. F. van der Heijden, P.J. van der Meer, Rodolfo Vásquez, Simone A. Vieira, Emilio Vilanova Torre, Vincent Vos, Ophelia Wang, Kenneth R. Young, Roderick Zagt, Timothy R. Baker
Software Mentions: 5
Published: almost 8 years ago

10.1098/rspb.2018.0640

The evolution of fungal substrate specificity in a widespread group of crustose lichens
Cited by: 17
Author(s): Philipp Resl, Fernando Fernández-Mendoza, Helmut Mayrhofer, Toby Spribille
Software Mentions: 4
Published: about 6 years ago

10.1186/1742-9994-11-24

The importance of having a partner: male help releases females from time limitation during incubation in birds
Cited by: 34
Author(s): Beata Matysioková, Vladimír Remeš
Software Mentions: 4
Published: almost 11 years ago

10.1038/s41598-019-51360-0

Phylogenetic comparative methods improve the selection of characters for generic delimitations in a hyperdiverse Neotropical orchid clade
Cited by: 10
Author(s): Diego Bogarín, Oscar Alejandro Pérez‐Escobar, Adam P. Karremans, Melania Fernández, Jaco Kruizinga, Franco Pupulin, Erik Smets, Barbara Gravendeel
Software Mentions: 4
Published: about 5 years ago

10.1093/aobpla/plz035

Dormancy and endosperm presence influence the ex situ conservation potential in central European calcareous grassland plants
Cited by: 11
Author(s): Simone Tausch, Martin Leipold, Christoph Reisch
Software Mentions: 4
Published: over 5 years ago

10.1098/rspb.2018.1473

Testing hypotheses for the function of the carnivoran baculum using finite-element analysis
Cited by: 11
Author(s): Charlotte A. Brassey, James Gardiner, Andrew C. Kitchener
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0179553

The tree balance signature of mass extinction is erased by continued evolution in clades of constrained size with trait-dependent speciation
Cited by: 3
Author(s): Guan-Dong Yang, Paul‐Michael Agapow, Gabriel Yedid
Software Mentions: 4
Published: over 7 years ago

10.1002/aps3.1037

chromploid: An R package for chromosome number evolution across the plant tree of life
Cited by: 19
Author(s): Rosana Zenil‐Ferguson, J. Gordon Burleigh, José Miguel Ponciano
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0163348

On the Morphological Description of Tracheal and Esophageal Displacement and Its Phylogenetic Distribution in Avialae
Cited by: 5
Author(s): Jeremy Klingler
Software Mentions: 4
Published: about 8 years ago

10.1371/journal.pone.0202729

Noise and biases in genomic data may underlie radically different hypotheses for the position of Iguania within Squamata
Cited by: 22
Author(s): Nicolás Mongiardino Koch, Jacques A. Gauthier
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0245249

Characteristics and driving mechanisms of species beta diversity in desert plant communities
Cited by: 9
Author(s): Longyang Jiang, Guanghui Lv, Yanming Gong, Yan Li, Hengfang Wang, Deyan Wu
Software Mentions: 4
Published: almost 4 years ago

10.1093/aobpla/plab032

Acid or base? How do plants regulate the ecology of their phylloplane?
Cited by: 10
Author(s): Kadeem J. Gilbert, Tanya Renner
Software Mentions: 4
Published: over 3 years ago

10.3390/biology10090825

The Evolution of Trait Disparity during the Radiation of the Plant Genus Macrocarpaea (Gentianaceae) in the Tropical Andes
Cited by: 2
Author(s): Julien Vieu, Darina Koubínová, Jason R. Grant
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0175037

Patterns of cetacean vaginal folds yield insights into functionality
Cited by: 21
Author(s): Dara N. Orbach, Christopher D. Marshall, Sarah L. Mesnick, Bernd Würsig
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0231925

Determinants and constraints of feather growth
Cited by: 10
Author(s): Lukas Jenni, Kathrin Ganz, Pietro Milanesi, Raffael Winkler
Software Mentions: 4
Published: over 4 years ago

10.1099/mgen.0.000368

prewas: data pre-processing for more informative bacterial GWAS
Cited by: 7
Author(s): Katie Saund, Zena Lapp, Stephanie Thiede, Ali Pirani, Evan S. Snitkin
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pbio.2000483

Family living sets the stage for cooperative breeding and ecological resilience in birds
Cited by: 99
Author(s): Michael Griesser, Szymon M. Drobniak, Shinichi Nakagawa, Carlos A. Botero
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pbio.3001270

Tempo and mode of morphological evolution are decoupled from latitude in birds
Cited by: 4
Author(s): Jonathan P. Drury, Julien Clavel, Joe Tobias, Jonathan Rolland, Catherine Sheard, Hélène Morlon
Software Mentions: 4
Published: over 3 years ago

10.1186/s12983-016-0141-5

How to build your dragon: scaling of muscle architecture from the world’s smallest to the world’s largest monitor lizard
Cited by: 31
Author(s): Taylor J. M. Dick, Christofer J. Clemente
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pbio.3001248

Identification of sequence changes in myosin II that adjust muscle contraction velocity
Cited by: 7
Author(s): Chloe A Johnson, Jake E McGreig, Sarah T. Jeanfavre, Jonathan Walklate, Carlos Vera, Marta Farré, Daniel P. Mulvihill, Anthony J. Baines, Martin S. Ridout, Leslie A. Leinwand, Mark N. Wass, Michael A. Geeves
Software Mentions: 4
Published: over 3 years ago

10.1186/s12864-019-6007-4

Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses
Cited by: 30
Author(s): José Salvatore Leister Patané, Joaquim Martins, Luiz Thibério Rangel, José Belasque, Luciano Antônio Digiampietri, Agda Paula Facincani, Rafael Marini Ferreira, Fabrício José Jaciani, Yunzeng Zhang, Alessandro M. Varani, Nalvo F. Almeida, Nian Wang, Jesus Aparecido Ferro, Leandro Márcio Moreira, João Carlos Setúbal
Software Mentions: 4
Published: about 5 years ago

10.1089/phage.2020.0046

Isolation and Characterization of Klebsiella Phages for Phage Therapy
Cited by: 32
Author(s): Eleanor Townsend, L. Kelly, Lucy Gannon, George Muscatt, Rhys A. Dunstan, Slawomir Michniewski, Hari Sapkota, Saija Kiljunen, Anna Kolsi, Mikael Skurnik, Trevor Lithgow, Andrew Millard, Eleanor Jameson
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12862-021-01848-z

Vertical clinging and leaping induced evolutionary rate shifts in postcranial evolution of tamarins and marmosets (Primates, Callitrichidae)
Cited by: 2
Author(s): Léo Botton‐Divet, John A. Nyakatura
Software Mentions: 4
Published: over 3 years ago

10.1534/g3.118.200880

Activation of the Bile Acid Pathway and No Observed Antimicrobial Peptide Sequences in the Skin of a Poison Frog
Cited by: 1
Author(s): Megan L. Civitello, Robert D. Denton, Michael Zasloff, John H. Malone
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-020-63956-y

The internal cranial anatomy of Champsosaurus (Choristodera: Champsosauridae): Implications for neurosensory function
Cited by: 9
Author(s): Thomas W. Dudgeon, Hillary C. Maddin, David C. Evans, Jordan C. Mallon
Software Mentions: 4
Published: over 4 years ago

10.7717/peerj.11997

A variable-rate quantitative trait evolution model using penalized-likelihood
Cited by: 12
Author(s): Liam J. Revell
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.7132

Impacts of growth form and phylogenetic relatedness on seed germination: A large‐scale analysis of a subtropical regional flora
Cited by: 3
Author(s): Juhong Wang, Guangdong Xu, Cuié Wen, Yang Ma, Wei Qi, Chunhui Zhang, Xianliang Cui
Software Mentions: 4
Published: almost 4 years ago

10.1002/ece3.6008

The uplift of the Qinghai–Tibet Plateau and glacial oscillations triggered the diversification of Tetraogallus (Galliformes, Phasianidae)
Cited by: 5
Author(s): Li Ding, Jicheng Liao, Naifa Liu
Software Mentions: 4
Published: almost 5 years ago

10.1002/ece3.7237

Occurrence data uncover patterns of allopatric divergence and interspecies interactions in the evolutionary history of Sceloporus lizards
Cited by: 6
Author(s): Julio A. Rivera, Heather N. Rich, A. Michelle Lawing, Michael S. Rosenberg, Emilı́a P. Martins
Software Mentions: 4
Published: almost 4 years ago

10.1002/ece3.3927

Phenotypic integration and the evolution of signal repertoires: A case study of treefrog acoustic communication
Cited by: 8
Author(s): Michael S. Reichert, Gerlinde Höbel
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12862-018-1212-3

A North American stem turaco, and the complex biogeographic history of modern birds
Cited by: 26
Author(s): Daniel J. Field, Allison Y. Hsiang
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.3564

Phylogenetic turnover during subtropical forest succession across environmental and phylogenetic scales
Cited by: 22
Author(s): Oliver Purschke, Stefan G. Michalski, Helge Bruelheide, Walter Durka
Software Mentions: 4
Published: about 7 years ago

10.1186/s12864-019-6188-x

Genetic and metabolic signatures of Salmonella enterica subsp. enterica associated with animal sources at the pangenomic scale
Cited by: 26
Author(s): Meryl Vila Nova, Kévin Durimel, Kévin La, Arnaud Felten, Philippe Bessières, Michel‐Yves Mistou, Mahendra Mariadassou, Nicolas Radomski
Software Mentions: 4
Published: about 5 years ago

10.7717/peerj.5902

Integration of phylogenomics and molecular modeling reveals lineage-specific diversification of toxins in scorpions
Cited by: 21
Author(s): Carlos E. Santibáñez‐López, Ricardo Kriebel, Jesús A. Ballesteros, Nathaniel Rush, Zachary L. Witter, J. R. Williams, Daniel Janies, Prashant P. Sharma
Software Mentions: 4
Published: about 6 years ago

10.1186/s12866-017-1132-1

First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts
Cited by: 24
Author(s): Arnaud Felten, Meryl Vila Nova, Kévin Durimel, Laurent Guillier, Michel‐Yves Mistou, Nicolas Radomski
Software Mentions: 4
Published: about 7 years ago

10.3390/genes10050338

Diversification of Transposable Elements in Arthropods and Its Impact on Genome Evolution
Cited by: 24
Author(s): Changcheng Wu, Jian Lü
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.5652

The evolution of climate tolerance in conifer‐feeding aphids in relation to their host's climatic niche
Cited by: 8
Author(s): Pierre Arnal, Armelle Coeur d’Acier, Colin Favret, Gottfried Martin, Ge‐Xia Qiao, Emmanuelle Jousselin, Andrea S. Meseguer
Software Mentions: 4
Published: about 5 years ago

10.7717/peerj.8584

Iroki: automatic customization and visualization of phylogenetic trees
Cited by: 73
Author(s): Moore Rm, Amelia O. Harrison, Sean M. McAllister, Shawn W. Polson, K. Eric Wommack
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12862-019-1432-1

The multifactorial nature of beak and skull shape evolution in parrots and cockatoos (Psittaciformes)
Cited by: 35
Author(s): Jen A. Bright, Jesús Marugán‐Lobón, Emily J. Rayfield, Samuel N. Cobb
Software Mentions: 4
Published: over 5 years ago

10.1186/s12862-019-1473-5

From low to high latitudes: changes in fatty acid desaturation in mammalian fat tissue suggest a thermoregulatory role
Cited by: 12
Author(s): Alicia Guerrero, Tracey L. Rogers
Software Mentions: 4
Published: over 5 years ago

10.1093/aob/mcaa103

Red flowers differ in shades between pollination systems and across continents
Cited by: 21
Author(s): Zhe Chen, Ning Yang, Liu Chang-qiu, Hang Sun
Software Mentions: 4
Published: over 4 years ago

10.1002/ece3.5303

Parthenogenetic vs. sexual reproduction in oribatid mite communities
Cited by: 24
Author(s): Mark Maraun, Tancredi Caruso, Jonathan Hense, Ricarda Lehmitz, Levan Mumladze, Maka Murvanidze, Ioana Nae, Julia Schulz, Anna Seniczak, Stefan Scheu
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.3925

Environmental determinism, and not interspecific competition, drives morphological variability in Australasian warblers (Acanthizidae)
Cited by: 3
Author(s): Vicente García‐Navas, Marta Rodríguez-Rey, Petter Z. Marki, Leslie Christidis
Software Mentions: 4
Published: over 6 years ago

10.7717/peerj.10950

Phylogenetically-controlled correlates of primate blinking behaviour
Cited by: 2
Author(s): Sean A. Rands
Software Mentions: 4
Published: almost 4 years ago

10.1002/ece3.4073

Dispersal capacity explains the evolution of lifespan variability
Cited by: 5
Author(s): Ismael Galván, Anders Pape Møller
Software Mentions: 4
Published: over 6 years ago

10.1093/jxb/erx163

The diversity of CO2-concentrating mechanisms in marine diatoms as inferred from their genetic content
Cited by: 26
Author(s): Chen Shen, Christopher L. Dupont, Brian M. Hopkinson
Software Mentions: 4
Published: over 7 years ago

10.7717/peerj.1241

Partitioning the impact of environment and spatial structure on alpha and beta components of taxonomic, functional, and phylogenetic diversity in European ants
Cited by: 74
Author(s): Xavier Arnán, Xím Cerdá, Javier Retana
Software Mentions: 4
Published: about 9 years ago

10.1093/iob/obz006

Crocodylian Head Width Allometry and Phylogenetic Prediction of Body Size in Extinct Crocodyliforms
Cited by: 27
Author(s): Haley O’Brien, Leigha M. Lynch, Kent A. Vliet, John Brueggen, Gregory M. Erickson, Paul M. Gignac
Software Mentions: 4
Published: almost 6 years ago

10.7717/peerj.8744

Dental characters used in phylogenetic analyses of mammals show higher rates of evolution, but not reduced independence
Cited by: 8
Author(s): Neil Brocklehurst, Gemma Louise Benevento
Software Mentions: 4
Published: over 4 years ago

10.1002/ece3.1810

Evolutionary patterns of volatile terpene emissions across 202 tropical tree species
Cited by: 26
Author(s): Elodie A. Courtois, Kyle G. Dexter, C. E. Timothy Paine, Didier Stien, Julien Engel, Christopher Baraloto, Jérôme Chave
Software Mentions: 4
Published: over 8 years ago

10.7717/peerj.2402

Evolutionary patterns of range size, abundance and species richness in Amazonian angiosperm trees
Cited by: 29
Author(s): Kyle G. Dexter, Jérôme Chave
Software Mentions: 4
Published: about 8 years ago

10.1002/ece3.5418

Species‐level repertoire size predicts a correlation between individual song elaboration and reproductive success
Cited by: 18
Author(s): Cristina M. Robinson, Nicole Creanza
Software Mentions: 4
Published: over 5 years ago

10.1186/s12915-021-01105-1

The relationship between sternum variation and mode of locomotion in birds
Cited by: 13
Author(s): Talia M. Lowi‐Merri, Roger Benson, Santiago Claramunt, David C. Evans
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.6468

Leaf‐footed bugs possess multiple hidden contrasting color signals, but only one is associated with increased body size
Cited by: 5
Author(s): Zachary Emberts, Charles H. Miller, Chelsea Skojec, Rachel M. Shepherd, Colette M. St. Mary
Software Mentions: 4
Published: over 4 years ago

10.1002/ece3.5019

Area and distance from mainland affect in different ways richness and phylogenetic diversity of snakes in Atlantic Forest coastal islands
Cited by: 10
Author(s): José Thales da Motta Portillo, Lilian Sayuri Ouchi-Melo, Lucas Batista Crivellari, Thiago Alves Lopes de Oliveira, Ricardo J. Sawaya, Leonardo da Silva Duarte
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-021-88106-w

Microstructures amplify carotenoid plumage signals in tanagers
Cited by: 15
Author(s): Dakota E. McCoy, Allison J. Shultz, Charles Vidoudez, Emma van der Heide, Jacqueline E. Dall, Sunia A. Trauger, David Haig
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.5996

Tunicate bulb size variation in monocots explained by temperature and phenology
Cited by: 8
Author(s): Cody Coyotee Howard, Nico Cellinese
Software Mentions: 4
Published: almost 5 years ago

10.1038/s41598-018-22421-7

Proximate mechanisms affecting seasonal differences in migration speed of avian species
Cited by: 61
Author(s): Heiko Schmaljohann
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-021-89364-4

Diversification of the Balloon bushcrickets (Orthoptera, Hexacentrinae, Aerotegmina) in the East African mountains
Cited by: 3
Author(s): Beata Grzywacz, Elżbieta Warchałowska‐Śliwa, Maciej Kociński, Klaus‐Gerhard Heller, Claudia Hemp
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.8047

Evolution of winter molting strategies in European and North American migratory passerines
Cited by: 5
Author(s): Claudie Pageau, Jared Sonnleitner, Christopher M. Tonra, Mateen Shaikh, Matthew W. Reudink
Software Mentions: 4
Published: over 3 years ago

10.7554/eLife.51089

Pan-mammalian analysis of molecular constraints underlying extended lifespan
Cited by: 50
Author(s): Amanda Kowalczyk, Raghavendran Partha, Nathan L. Clark, Maria Chikina
Software Mentions: 4
Published: almost 5 years ago

10.7554/eLife.37563

Intrinsic cooperativity potentiates parallel cis-regulatory evolution
Cited by: 16
Author(s): Trevor R. Sorrells, Amanda N Johnson, Conor J Howard, Candace S Britton, Kyle R. Fowler, Jordan T. Feigerle, P A Weil, Alexander D. Johnson
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.3042

Rates and relations of mitochondrial genome evolution across the Echinoidea, with special focus on the superfamily Odontophora
Cited by: 9
Author(s): Áki J. Láruson
Software Mentions: 4
Published: over 7 years ago

10.7554/eLife.66926

Rampant tooth loss across 200 million years of frog evolution
Cited by: 11
Author(s): Daniel J. Paluh, Karina Riddell, Catherine Early, Maggie M. Hantak, Gregory F.M. Jongsma, Rachel Keeffe, Fernanda Magalhães Silva, Stuart V. Nielsen, María Camila Vallejo-Pareja, Edward L. Stanley, David C. Blackburn
Software Mentions: 4
Published: over 3 years ago

10.7554/eLife.38190

A kinematic synergy for terrestrial locomotion shared by mammals and birds
Cited by: 26
Author(s): Giovanna Catavitello, Yuri P. Ivanenko, Francesco Lacquaniti
Software Mentions: 4
Published: about 6 years ago

10.7554/eLife.67509

Quantifying the relationship between genetic diversity and population size suggests natural selection cannot explain Lewontin’s Paradox
Cited by: 52
Author(s): Vince Buffalo
Software Mentions: 4
Published: over 3 years ago

10.3390/genes12070965

Mitogenomes Reveal Two Major Influxes of Papuan Ancestry across Wallacea Following the Last Glacial Maximum and Austronesian Contact
Cited by: 12
Author(s): Gludhug A. Purnomo, Kieren J. Mitchell, Sue O’Connor, Shimona Kealy, Leonard Taufik, Sophie Schiller, Adam Ben Rohrlach, Alan Cooper, Bastien Llamas, Herawati Sudoyo, João C. Teixeira, Raymond Tobler
Software Mentions: 4
Published: over 3 years ago

10.1186/s12862-017-1071-3

A reconstruction of sexual modes throughout animal evolution
Cited by: 20
Author(s): Daniel A. Sasson, Joseph F. Ryan
Software Mentions: 4
Published: about 7 years ago

10.1038/s41598-018-21077-7

Patterns of sexual size dimorphism in horseshoe bats: Testing Rensch’s rule and potential causes
Cited by: 8
Author(s): Hui Wu, Tinglei Jiang, Xiaobin Huang, Jiang Feng
Software Mentions: 4
Published: almost 7 years ago

10.7554/eLife.65130

Collateral sensitivity associated with antibiotic resistance plasmids
Cited by: 14
Author(s): Cristina Herencias, Jerónimo Rodríguez-Beltrán, Ricardo León‐Sampedro, Aída Alonso-del Valle, Jana Palkovičová, Rafael Cantón, Álvaro San Millán
Software Mentions: 4
Published: almost 4 years ago

10.1126/sciadv.abe8215

Dynamics of sex chromosome evolution in a rapid radiation of cichlid fishes
Cited by: 28
Author(s): Athimed El Taher, Fabrizia Ronco, Michael Matschiner, Walter Salzburger, Astrid Böhne
Software Mentions: 4
Published: over 3 years ago

10.1186/s12862-019-1523-z

Ancient events and climate adaptive capacity shaped distinct chloroplast genetic structure in the oak lineages
Cited by: 12
Author(s): Mengxiao Yan, Ruibin Liu, Ying Liu, Andrew L. Hipp, Min Deng, Yanshi Xiong
Software Mentions: 4
Published: about 5 years ago

10.1002/evl3.225

Ecological interactions shape the evolution of flower color in communities across a temperate biodiversity hotspot
Cited by: 5
Author(s): Alexander Skeels, Russell Dinnage, Iliana Medina, Marcel Cardillo
Software Mentions: 4
Published: over 3 years ago

10.1126/sciadv.abe2778

The evolution of pelvic limb muscle moment arms in bird-line archosaurs
Cited by: 24
Author(s): Vivian Allen, Brandon M. Kilbourne, John R. Hutchinson
Software Mentions: 4
Published: over 3 years ago

10.1007/s00792-018-1071-2

Cuniculiplasmataceae, their ecogenomic and metabolic patterns, and interactions with ‘ARMAN’
Cited by: 10
Author(s): Olga V. Golyshina, Rafael Bargiela, Peter N. Golyshin
Software Mentions: 4
Published: about 6 years ago

10.1098/rsos.202145

The limits of convergence: the roles of phylogeny and dietary ecology in shaping non-avian amniote crania
Cited by: 5
Author(s): Keegan M. Melstrom, Kenneth D. Angielczyk, Kathleen A. Ritterbush, Randall B. Irmis
Software Mentions: 4
Published: over 3 years ago

10.3389/fcimb.2020.00460

Reassortment Between Divergent Strains of Camp Ripley Virus (Hantaviridae) in the Northern Short-Tailed Shrew (Blarina brevicauda)
Cited by: 5
Author(s): Schuyler Liphardt, Hae Ji Kang, Satoru Arai, Se Hun Gu, Joseph A. Cook, Richard Yanagihara
Software Mentions: 4
Published: about 4 years ago

10.3389/fgene.2015.00130

An engine for global plant diversity: highest evolutionary turnover and emigration in the American tropics
Cited by: 76
Author(s): Alexandre Antonelli, Alexander Zizka, Daniele Silvestro, Ruud Scharn, Borja Cascales‐Miñana, Christine D. Bacon
Software Mentions: 4
Published: over 9 years ago

10.1038/srep37729

Holding-on: co-evolution between infant carrying and grasping behaviour in strepsirrhines
Cited by: 17
Author(s): Louise R. Peckre, Anne‐Claire Fabre, Christine E. Wall, David L. Brewer, Erin Ehmke, David Haring, Erin Shaw, Kay Welser, Emmanuelle Pouydebat
Software Mentions: 4
Published: about 8 years ago

10.1093/sysbio/syy070

Changing Ecological Opportunities Facilitated the Explosive Diversification of New Caledonian Oxera (Lamiaceae)
Cited by: 15
Author(s): Laure Barrabé, Sébastien Lavergne, Giliane Karnadi-Abdelkader, Bryan T. Drew, Philippe Birnbaum, Gildas Gâteblé
Software Mentions: 4
Published: about 6 years ago

10.1186/s12859-017-1554-7

SFREEMAP - A simulation-free tool for stochastic mapping
Cited by: 3
Author(s): Diego Pasqualin, Marcos S. Barbeitos, Fabiano Silva
Software Mentions: 4
Published: almost 8 years ago

10.1038/s41396-018-0314-7

Bridging reproductive and microbial ecology: a case study in arbuscular mycorrhizal fungi
Cited by: 38
Author(s): Carlos A. Aguilar‐Trigueros, Stefan Hempel, Jeff R. Powell, William K. Cornwell, Matthias C. Rillig
Software Mentions: 4
Published: about 6 years ago

10.1098/rsos.170058

Semicircular canals inAnolislizards: ecomorphological convergence and ecomorph affinities of fossil species
Cited by: 20
Author(s): Blake V. Dickson, Emma Sherratt, Jonathan B. Losos, Stephanie E. Pierce
Software Mentions: 4
Published: about 7 years ago

10.1186/s13104-021-05455-5

Phylogenetic signal in floral temperature patterns
Cited by: 3
Author(s): Sean A. Rands, Michael Harrap
Software Mentions: 4
Published: almost 4 years ago

10.3389/fmicb.2019.01006

Characterization of New Recombinant Forms of HIV-1 From the Comunitat Valenciana (Spain) by Phylogenetic Incongruence
Cited by: 7
Author(s): Beatriz Beamud, María Alma Bracho, Fernando González‐Candelas
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2018.00803

Comparing Microbiome Sampling Methods in a Wild Mammal: Fecal and Intestinal Samples Record Different Signals of Host Ecology, Evolution
Cited by: 338
Author(s): Melissa R. Ingala, Nancy B. Simmons, Claudia Wultsch, Konstantinos Krampis, Kelly A. Speer, Susan L. Perkins
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2021.678100

Assessing Biosynthetic Gene Cluster Diversity of Specialized Metabolites in the Conserved Gut Symbionts of Herbivorous Turtle Ants
Cited by: 8
Author(s): Anaïs Chanson, Corrie S. Moreau, Christophe Duplais
Software Mentions: 4
Published: over 3 years ago

10.1093/sysbio/syz080

The Implications of Lineage-Specific Rates for Divergence Time Estimation
Cited by: 15
Author(s): Tom Carruthers, Michael J. Sanderson, Robert W. Scotland
Software Mentions: 4
Published: almost 5 years ago

Projects: cran: phytools

Papers Mentioning phytools 586