cran: pheatmap | Projects | Ecosyste.ms: Papers

10.1186/s12864-018-5078-y

Bacterial endosymbiont Cardinium cSfur genome sequence provides insights for understanding the symbiotic relationship in Sogatella furcifera host
Cited by: 29
Author(s): Zhen Zeng, Yating Fu, Dongyang Guo, Yuxuan Wu, Olugbenga Emmanuel Ajayi, Qingfa Wu
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0240847

Root- and foliar-applied silicon modifies C: N: P ratio and increases the nutritional efficiency of pre-sprouted sugarcane seedlings under water deficit
Cited by: 26
Author(s): Gelza Carliane Marques Teixeira, Renato de Mello Prado, Antônio Márcio Souza Rocha, Marisa de Cássia Píccolo
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0096552

Crude Oil Treatment Leads to Shift of Bacterial Communities in Soils from the Deep Active Layer and Upper Permafrost along the China-Russia Crude Oil Pipeline Route
Cited by: 81
Author(s): Shuai Yang, Wen Xi, Liang Zhao, Yulan Shi, Huijun Jin
Software Mentions: 1
Published: over 12 years ago

10.1186/s12864-017-3653-2

Defining the transcriptomic landscape of the developing enteric nervous system and its cellular environment
Cited by: 30
Author(s): Sweta Roy-Carson, Kevin Natukunda, Hsien-Chao Chou, Narinder Pal, Caitlin Farris, Stephan Schneider, Julie A. Kuhlman
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0194259

Serum microRNA profiles in athyroid patients on and off levothyroxine therapy
Cited by: 9
Author(s): Elske T. Massolt, Layal Chaker, Theo J. Visser, Ad J. M. Gillis, Lambert C. J. Dorssers, Carolien Beukhof, Boen L.R. Kam, Gaston J H Franssen, Giulia Brigante, Tessa M. van Ginhoven, W. Edward Visser, Leendert H. J. Looijenga, Robin P. Peeters
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0219220

Metabolomic profiles in yak mammary gland tissue during the lactation cycle
Cited by: 17
Author(s): Zhixiong Li, Mingfeng Jiang
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0213676

Carbohydrate intake attenuates post-exercise plasma levels of cytochrome P450-generated oxylipins
Cited by: 27
Author(s): David C. Nieman, Nicholas D. Gillitt, Guan-Yuan Chen, Qibin Zhang, Camila A. Sakaguchi, Ella H. Stephan
Software Mentions: 1
Published: over 7 years ago

10.1128/mSphere.01002-20

Dichloroacetate and Pyruvate Metabolism: Pyruvate Dehydrogenase Kinases as Targets Worth Investigating for Effective Therapy of Toxoplasmosis
Cited by: 5
Author(s): Mariana Galvão Ferrarini, Líndice Mitie Nisimura, Richard M. B. M. Girard, Mayke Bezerra Alencar, Mariana Sayuri Ishikawa Fragoso, Carlla Assis Araújo-Silva, Alan de Almeida Veiga, Ana Paula Ressetti Abud, Sheila Cristina Nardelli, Rossiane C. Vommaro, Ariel Mariano Silber, Marie France-Sagot, Andréa Rodrigues Ávila
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2164-15-347

DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum
Cited by: 52
Author(s): Evelien M. Bunnik, Anton Polishko, Jacques Prudhomme, Nadia Ponts, Sarjeet S. Gill, Stefano Lonardi, Karine G. Le Roch
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pgen.1006929

Comprehensive analysis of nucleocytoplasmic dynamics of mRNA in Drosophila cells
Cited by: 21
Author(s): Tao Chen, Bas van Steensel
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pgen.1004860

Enhanced Longevity by Ibuprofen, Conserved in Multiple Species, Occurs in Yeast through Inhibition of Tryptophan Import
Cited by: 77
Author(s): Chi He, Scott Tsuchiyama, Quynh T. Nguyen, Ekaterina Plyusnina, Samuel R. Terrill, Sarah Sahibzada, Bhumil Patel, Alena R. Faulkner, Mikhail Shaposhnikov, Ruilin Tian, Mitsuhiro Tsuchiya, Matt Kaeberlein, Alexey Moskalev, Brian K. Kennedy, Michael Polymenis
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pbio.2006571

Organic cation transporter 3 (Oct3) is a distinct catecholamines clearance route in adipocytes mediating the beiging of white adipose tissue
Cited by: 37
Author(s): Wenxin Song, Qi Luo, Yuping Zhang, Linkang Zhou, Ye Liu, Zhilong Ma, Jianming Guo, Yuedong Huang, Lili Cheng, Ziyi Meng, Zicheng Li, Bin Zhang, Siqi Li, Sook Wah Yee, Hao Fan, Peng Li, Kathleen M. Giacomini, Ligong Chen
Software Mentions: 1
Published: over 7 years ago

10.3390/plants8120615

Soil Mesofauna Respond to the Upward Expansion of Deyeuxia purpurea in the Alpine Tundra of the Changbai Mountains, China
Cited by: 2
Author(s): Tao Yan, Zhongqiang Wang, Chen Ma, Hongshi He, Jiawei Xu, Yinghua Jin, Haixia Wang, Xiaona Zheng
Software Mentions: 1
Published: over 6 years ago

10.3390/plants9070855

Identification of the Volatile Compounds and Observation of the Glandular Trichomes in Opisthopappus taihangensis and Four Species of Chrysanthemum
Cited by: 11
Author(s): Yanhong Guo, Tengxun Zhang, Jian Zhong, Tingting Ba, Ting Xu, Qixiang Zhang, Ming Sun
Software Mentions: 1
Published: about 6 years ago

10.3390/plants9050586

Insights into the SAM Synthetase Gene Family and Its Roles in Tomato Seedlings under Abiotic Stresses and Hormone Treatments
Cited by: 39
Author(s): Parviz Heidari, Faezeeh Mazloomi, Thomas Nußbaumer, Gianni Barcaccia
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-019-5698-x

Genome-wide identification, characterization and expression analysis of the non-specific lipid transfer proteins in potato
Cited by: 21
Author(s): Guojun Li, Menglu Hou, Yaxue Liu, Yanxi Pei, Minghui Ye, Yao Zhou, Chenxi Huang, Yaqi Zhao, Hongwei Ma
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-018-4985-2

Genome-wide identification of lipoxygenase gene family in cotton and functional characterization in response to abiotic stresses
Cited by: 45
Author(s): Muhammad Shaban, Muhammad Mahmood Ahmed, Heng Sun, Abid Ullah, Longfu Zhu
Software Mentions: 1
Published: about 8 years ago

10.1002/pld3.305

BHLH IRIDOID SYNTHESIS 3 is a member of a bHLH gene cluster regulating terpenoid indole alkaloid biosynthesis in Catharanthus roseus
Cited by: 18
Author(s): Sanjay K. Singh, Barunava Patra, Priyanka Paul, Yongliang Liu, Sitakanta Pattanaik, Ling Yuan
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-020-6479-2

Genome-wide analysis of the NAC transcription factor family in broomcorn millet (Panicum miliaceum L.) and expression analysis under drought stress
Cited by: 27
Author(s): Zhongying Shan, Yanmiao Jiang, Haiquan Li, Jian-Wei Guo, Ming Dong, Jianan Zhang, Guoqing Liu
Software Mentions: 1
Published: over 6 years ago

10.1111/pbi.13094

A single nucleotide mutation in<scp>GID</scp>1cdisrupts its interaction with<scp>DELLA</scp>1 and causes a GA‐insensitive dwarf phenotype in peach
Cited by: 47
Author(s): Jun Cheng, Mengmeng Zhang, Bin Tan, Yajun Jiang, Xianbo Zheng, Ye Xia, Zijing Guo, Tingting Xiong, Wei Wang, Jidong Li, Jiancan Feng
Software Mentions: 1
Published: over 7 years ago

10.3390/ph12010033

Characterisation of an Isogenic Model of Cisplatin Resistance in Oesophageal Adenocarcinoma Cells
Cited by: 9
Author(s): A Buckley, Becky A.S. Bibby, Margaret R. Dunne, Susan Kennedy, Maria Davern, Breandán N Kennedy, Stephen G. Maher, Jacintha O’Sullivan
Software Mentions: 1
Published: over 7 years ago

10.7717/peerj.7544

Crucial lncRNAs associated with adipocyte differentiation from human adipose-derived stem cells based on co-expression and ceRNA network analyses
Cited by: 15
Author(s): Kana Chen, Shujie Xie, Wujun Jin
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12864-021-07501-9

Transcriptomes analysis reveals novel insight into the molecular mechanisms of somatic embryogenesis in Hevea brasiliensis
Cited by: 15
Author(s): Ying Wang, Hui‐Liang Li, Yong-Kai Zhou, Dong Guo, Jiahong Zhu, Shi-Qing Peng
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.4030

Whole genome sequencing of Rhodotorula mucilaginosa isolated from the chewing stick (Distemonanthus benthamianus): insights into Rhodotorula phylogeny, mitogenome dynamics and carotenoid biosynthesis
Cited by: 19
Author(s): Han Ming Gan, Bolaji N. Thomas, Nicole T. Cavanaugh, Grace Morales, Ashley N Mayers, Michael A. Savka, André O. Hudson
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12872-020-01527-9

Identification of transcription factors MYC and C/EBPβ mediated regulatory networks in heart failure based on gene expression omnibus datasets
Cited by: 2
Author(s): Haiwei Wang, Xinrui Wang, Liangpu Xu, Hua Cao
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.11496

Identification of potential gene signatures associated with osteosarcoma by integrated bioinformatics analysis
Cited by: 13
Author(s): Yutao Jia, Yang Liu, Zhihua Han, Rong Tian
Software Mentions: 1
Published: about 5 years ago

10.1186/s12885-019-5802-2

Analysis of the transcriptomic features of microsatellite instability subtype colon cancer
Cited by: 9
Author(s): Haiwei Wang, Xinrui Wang, Liangpu Xu, Ji Zhang, Hua Cao
Software Mentions: 1
Published: about 7 years ago

10.7717/peerj.4514

Assessing soil bacterial community and dynamics by integrated high-throughput absolute abundance quantification
Cited by: 57
Author(s): Jun Lou, Li Yang, Haizhen Wang, Laosheng Wu, Jianming Xu
Software Mentions: 1
Published: over 8 years ago

10.7717/peerj.11329

Genome-wide identification, classification, and expression analysis of the HSF gene family in pineapple (Ananas comosus)
Cited by: 7
Author(s): Lulu Wang, Qing Liu, Mengnan Chai, Huihuang Chen, Mohammad Aslam, Xiaoping Niu, Yuan Qin, Hanyang Cai
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.6455

Amorphous silica nanoparticles induce tumorigenesis via regulating ATP5H/SOD1-related oxidative stress, oxidative phosphorylation and EIF4G2/PABPC1-associated translational initiation
Cited by: 5
Author(s): Dongli Xie, Yang Zhou, Xiaogang Luo
Software Mentions: 1
Published: over 7 years ago

10.1186/s12967-018-1640-2

Systematic analysis of lncRNA–miRNA–mRNA competing endogenous RNA network identifies four-lncRNA signature as a prognostic biomarker for breast cancer
Cited by: 188
Author(s): Chi Fan, Lei Ma, Ning Liu
Software Mentions: 1
Published: almost 8 years ago

10.1186/s40246-018-0186-y

Germline TP53 and MSH6 mutations implicated in sporadic triple-negative breast cancer (TNBC): a preliminary study
Cited by: 8
Author(s): Dandan Yi, Lei Xu, Jiaqi Luo, Xiaobin You, Tao Huang, Yi Zi, Xiaoting Li, Ru Wang, Zaixuan Zhong, Xiaoqiao Tang, Ang Li, Yujian Shi, Jianmei Rao, Yifen Zhang, Jianfeng Sang
Software Mentions: 1
Published: over 7 years ago

10.3390/pathogens3010211

Genome Sequencing of Xanthomonas vasicola Pathovar vasculorum Reveals Variation in Plasmids and Genes Encoding Lipopolysaccharide Synthesis, Type-IV Pilus and Type-III Secretion Effectors
Cited by: 23
Author(s): Arthur Wasukira, Max Coulter, Noorah Al-Sowayeh, Richard Thwaites, Konrad Paszkiewicz, Jerome Kubiriba, J. J. Smith, Murray Grant, David J. Studholme
Software Mentions: 1
Published: over 12 years ago

10.1186/s12967-019-02145-6

Long non-coding RNA BZRAP1-AS1 silencing suppresses tumor angiogenesis in hepatocellular carcinoma by mediating THBS1 methylation
Cited by: 32
Author(s): Weiwei Wang, Guoyong Chen, Bing Wang, Zheng Yuan, Guangbo Liu, Biao Niu, Yongfeng Chen, Shaotang Zhou, Jin He, Hao Xue
Software Mentions: 1
Published: over 6 years ago

10.1186/s12885-020-07293-3

DLBCL with amplification of JAK2/PD-L2 exhibits PMBCL-like CNA pattern and worse clinical outcome resembling those with MYD88 L265P mutation
Cited by: 1
Author(s): Xuemin Xue, Wenting Huang, Tian Qiu, Lei Guo, Ying Jin, Ning Lv
Software Mentions: 1
Published: almost 6 years ago

10.1186/s40851-019-0146-y

Gene expression profiles of dicyemid life-cycle stages may explain how dispersing larvae locate new hosts
Cited by: 0
Author(s): Tsai-Ming Lu, Hidetaka Furuya, Noriyuki Satoh
Software Mentions: 1
Published: almost 7 years ago

10.3390/v13040671

Characterization of a Novel Group of Listeria Phages That Target Serotype 4b Listeria monocytogenes
Cited by: 8
Author(s): Yaxiong Song, Tracey L. Peters, Daniel W. Bryan, Lauren K. Hudson, Thomas G. Denes
Software Mentions: 1
Published: over 5 years ago

10.1186/s12885-019-6068-4

Glutamate metabotropic receptor 4 (GRM4) inhibits cell proliferation, migration and invasion in breast cancer and is regulated by miR-328-3p and miR-370-3p
Cited by: 32
Author(s): Bin Xiao, Daxiang Chen, Quan Zhou, Jianfeng Hang, Weiyun Zhang, Zhenzhan Kuang, Zhigang Sun, Linhai Li
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41396-020-0590-x

Anaerobic methane oxidation coupled to manganese reduction by members of the Methanoperedenaceae
Cited by: 186
Author(s): Andy O. Leu, Chen Cai, Simon Jon McIlroy, Gordon Southam, Victoria J. Orphan, Zhiguo Yuan, Shihu Hu, Gene W. Tyson
Software Mentions: 1
Published: over 6 years ago

10.1186/s12885-021-08569-y

Radiomic assessment as a method for predicting tumor mutation burden (TMB) of bladder cancer patients: a feasibility study
Cited by: 8
Author(s): Xin Tang, Wen-Lei Qian, Wei‐Feng Yan, Tong Pang, Youling Gong, Zhigang Yang
Software Mentions: 1
Published: about 5 years ago

10.3390/v11111070

A Multi-Omics Study of Chicken Infected by Nephropathogenic Infectious Bronchitis Virus
Cited by: 17
Author(s): Puzhi Xu, Ping Liu, Changming Zhou, Yan Shi, Qingpeng Wu, Yulin Yang, Guyue Li, Guoliang Hu, Xiaomin Guo
Software Mentions: 1
Published: almost 7 years ago

10.1080/21505594.2020.1747799

Molecularly defined extraintestinal pathogenic Escherichia coli status predicts virulence in a murine sepsis model better than does virotype, individual virulence genes, or clonal subset among E. coli ST131 isolates
Cited by: 12
Author(s): Irene Merino, Stephen Porter, Brian Johnston, Connie Clabots, Paul Thuras, Patrícia Ruíz-Garbajosa, Rafael Cantón, James R. Johnson
Software Mentions: 1
Published: over 6 years ago

10.1016/j.omtn.2019.04.013

MicroRNA-1305 Inhibits the Stemness of LCSCs and Tumorigenesis by Repressing the UBE2T-Dependent Akt-Signaling Pathway
Cited by: 35
Author(s): Xiaoyong Wei, Xiaolong You, Jianlong Zhang, Cuncai Zhou
Software Mentions: 1
Published: about 7 years ago

10.1186/s13046-018-0923-z

Elevated Na/H exchanger 1 (SLC9A1) emerges as a marker for tumorigenesis and prognosis in gliomas
Cited by: 42
Author(s): Xiudong Guan, Lanxin Luo, Gulnaz Begum, Gary Kohanbash, Qingkun Song, Aparna Rao, Nduka Amankulor, Baoshan Sun, Dandan Sun, Wang Jia
Software Mentions: 1
Published: almost 8 years ago

10.1186/s13046-019-1023-4

RETRACTED ARTICLE: MicroRNA-506 inhibits tumor growth and metastasis in nasopharyngeal carcinoma through the inactivation of the Wnt/β-catenin signaling pathway by down-regulating LHX2
Cited by: 69
Author(s): Tian Liang, Yanjun Zheng, Juan Wang, Jingyi Zhao, Daoke Yang, Zhangsuo Liu
Software Mentions: 1
Published: over 7 years ago

10.1186/s12859-018-2080-y

Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing
Cited by: 3
Author(s): Armen Abnousi, Shira L. Broschat, Ananth Kalyanaraman
Software Mentions: 1
Published: over 8 years ago

10.1002/mgg3.1404

Development of an immune‐related prognostic model for pediatric acute lymphoblastic leukemia patients
Cited by: 3
Author(s): Xi Quan, Nan Zhang, Ying Chen, Hanqing Zeng, Junming Deng
Software Mentions: 1
Published: about 6 years ago

10.1186/s13046-019-1488-1

Human bone marrow mesenchymal stem cells-derived microRNA-205-containing exosomes impede the progression of prostate cancer through suppression of RHPN2
Cited by: 58
Author(s): Shuangjian Jiang, Chengqiang Mo, Shengjie Guo, Sian Liu, Bin Huang, Xiaopeng Mao
Software Mentions: 1
Published: over 6 years ago

10.3390/molecules25010137

A Widely Metabolomic Analysis Revealed Metabolic Alterations of Epimedium Pubescens Leaves at Different Growth Stages
Cited by: 12
Author(s): Zhenxian Qin, Dengqun Liao, Yalan Chen, Chenyang Zhang, Ruipeng An, Qing Zeng, Xianen Li
Software Mentions: 1
Published: over 6 years ago

10.1128/AEM.01908-20

Ruminal Degradation of Rumen-Protected Glucose Influences the Ruminal Microbiota and Metabolites in Early-Lactation Dairy Cows
Cited by: 17
Author(s): Yapin Wang, Xuemei Nan, Yiguang Zhao, Yue Wang, Linshu Jiang, Benhai Xiong
Software Mentions: 1
Published: over 5 years ago

10.1186/s12967-020-02572-w

PGM5-AS1 impairs miR-587-mediated GDF10 inhibition and abrogates progression of prostate cancer
Cited by: 18
Author(s): Lei Du, Yongli Gao
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules26030745

Fungicidal Activity of Volatile Organic Compounds Emitted by Burkholderia gladioli Strain BBB-01
Cited by: 15
Author(s): Yingtong Lin, Cheng-Cheng Lee, Wei-Ming Leu, Je-Jia Wu, Yu-Cheng Huang, Menghsiao Meng
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules22122255

Identification of the Sex-Biased Gene Expression and Putative Sex-Associated Genes in Eucommia ulmoides Oliver Using Comparative Transcriptome Analyses
Cited by: 14
Author(s): Wencai Wang, Xianzhi Zhang
Software Mentions: 1
Published: over 8 years ago

10.1186/s12943-017-0610-2

ITIH5 mediates epigenetic reprogramming of breast cancer cells
Cited by: 24
Author(s): Michael Rose, Vera Kloten, Erik Noetzel, Lukas Gola, Josef Ehling, Timon Heide, Steffen K. Meurer, Aljona Gaiko-Shcherbak, Antonio Sechi, Sebastian Huth, Ralf Weiskirchen, Oliver Klaas, Wiebke Antonopoulos, Qiong Lin, Wolfgang Wagner, Jürgen Veeck, Felix Gremse, Julia Steitz, Ruth Knüchel, Edgar Dahl
Software Mentions: 1
Published: over 9 years ago

10.3390/microorganisms9081559

Culture Degeneration Reduces Sex-Related Gene Expression, Alters Metabolite Production and Reduces Insect Pathogenic Response in Cordyceps militaris
Cited by: 5
Author(s): Peter A. D. Wellham, Abdul Hafeez, Andrej Gregori, Matthias Brock, Dong-Hyun Kim, David Chandler, Cornelia H. de Moor
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9081577

Comparative Genomics Revealing Insights into Niche Separation of the Genus Methylophilus
Cited by: 0
Author(s): Na Lin, Ye Tao, Peixin Gao, Yan Xu, Peng Xing
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms7120678

Insights into Antagonistic Interactions of Multidrug Resistant Bacteria in Mangrove Sediments from the South Indian State of Kerala
Cited by: 12
Author(s): Madangchanok Imchen, Ravali Krishna Vennapu, Preetam Ghosh, Ranjith Kumavath
Software Mentions: 1
Published: over 6 years ago

10.3390/antiox10081225

Discovering the Protective Effects of Resveratrol on Aflatoxin B1-Induced Toxicity: A Whole Transcriptomic Study in a Bovine Hepatocyte Cell Line
Cited by: 10
Author(s): Marianna Pauletto, Mery Giantin, Roberta Tolosi, Irene Bassan, Andrea Barbarossa, Anna Zaghini, Mauro Dacasto
Software Mentions: 1
Published: about 5 years ago

10.18632/aging.104099

Comprehensive circular RNA expression profiling constructs a ceRNA network and identifies hsa_circ_0000673 as a novel oncogene in distal cholangiocarcinoma
Cited by: 5
Author(s): Xin Zhao, Xinxue Zhang, Zhigang Zhang, Zhe Liu, Jiang Zhu, Shaocheng Lyu, Lixin Li, Ren Lang, Qiang He
Software Mentions: 1
Published: over 5 years ago

10.1155/2019/7350414

Genome-Wide Identification, Characterization, and Expression Analysis of the Grapevine Superoxide Dismutase (SOD) Family
Cited by: 25
Author(s): Xin Hu, Chenyu Hao, Zong‐Ming Cheng, Yan Zhong
Software Mentions: 1
Published: over 7 years ago

10.3390/microorganisms9040782

Different Responses of Bacterial and Archaeal Communities in River Sediments to Water Diversion and Seasonal Changes
Cited by: 12
Author(s): Jiali Lv, Yangdan Niu, Rong Yuan, Shiqin Wang
Software Mentions: 1
Published: over 5 years ago

10.1002/mbo3.1236

Effect of the skincare product on facial skin microbial structure and biophysical parameters: A pilot study
Cited by: 4
Author(s): Bo Kyoung Hwang, Sado Lee, Joonoh Myoung, Seung Jin Hwang, Jun Man Lim, Eui Taek Jeong, Sun Gyoo Park, Sung Hun Youn
Software Mentions: 1
Published: almost 5 years ago

10.1111/1751-7915.12161

Some (bacilli) like it hot: genomics ofGeobacillusspecies
Cited by: 38
Author(s): David J. Studholme
Software Mentions: 1
Published: almost 12 years ago

10.3390/metabo10120488

Effect of Expression of Human Glucosylceramidase 2 Isoforms on Lipid Profiles in COS-7 Cells
Cited by: 6
Author(s): Peeranat Jatooratthawichot, Chutima Talabnin, Lukana Ngiwsara, Yepy H. Rustam, Jisnuson Svasti, Gavin E. Reid, James R. Ketudat Cairns
Software Mentions: 1
Published: over 5 years ago

10.3390/metabo10090337

Delayed Motor Milestones Achievement in Infancy Associates with Perturbations of Amino Acids and Lipid Metabolic Pathways
Cited by: 2
Author(s): Rebecca K. Vinding, Daniela Rago, Rachel S. Kelly, Gözde Gürdeniz, Morten Arendt Rasmussen, Jakob Stokholm, Klaus Bønnelykke, Augusto A. Litonjua, Scott T. Weiss, Jessica Lasky‐Su, Hans Bisgaard, Bo Chawes
Software Mentions: 1
Published: almost 6 years ago

10.3390/antibiotics9050271

Mining the Biosynthetic Potential for Specialized Metabolism of a Streptomyces Soil Community
Cited by: 18
Author(s): Matthieu Nicault, Abdoul-Razak Tidjani, Anthony Gauthier, Stéphane Dumarçay, Éric Gelhaye, Cyril Bontemps, Pierre Leblond
Software Mentions: 1
Published: about 6 years ago

10.1097/MD.0000000000019612

Potential mechanisms and serum biomarkers involved in sex differences in pulmonary arterial hypertension
Cited by: 3
Author(s): Chan Li, Zeyu Zhang, Qian Xu, Ting Wu, Ruizheng Shi
Software Mentions: 1
Published: over 6 years ago

10.1155/2020/8919534

Identification of miRNA-mRNA Crosstalk in Respiratory Syncytial Virus- (RSV-) Associated Pediatric Pneumonia through Integrated miRNAome and Transcriptome Analysis
Cited by: 10
Author(s): Xu Zhang, Feng Huang, Diyuan Yang, Tao Peng, Gen Liu
Software Mentions: 1
Published: over 6 years ago

10.3390/life11060544

Extensive Metabolite Profiling in the Unexploited Organs of Black Tiger for Their Potential Valorization in the Pharmaceutical Industry
Cited by: 2
Author(s): Jianfei Gao, Kangning Xiong, Wei Zhou, Weijie Li
Software Mentions: 1
Published: about 5 years ago

10.1002/cam4.1532

Downregulation of <scp>NDR</scp>1 contributes to metastasis of prostate cancer cells via activating epithelial‐mesenchymal transition
Cited by: 7
Author(s): Juntao Yue, Huimin Sun, Shijie Liu, Fei Yu, Shanshan Wang, Fuli Wang, Ruixiong Shen, Feng Zhu, Lei Zhang, Chen Shao
Software Mentions: 1
Published: over 8 years ago

10.1002/cam4.3246

Large granular lymphocyte leukemia serum and corresponding hematological parameters reveal unique cytokine and sphingolipid biomarkers and associations with STAT3 mutations
Cited by: 9
Author(s): Kristine C. Olson, Katharine B. Moosic, Marieke K. Jones, Paige M.K. Larkin, Thomas L. Olson, Mariella Toro, Todd E. Fox, David J. Feith
Software Mentions: 1
Published: about 6 years ago

10.1002/cam4.1379

Chemotherapy and terminal skeletal muscle differentiation in WT1- mutant Wilms tumors
Cited by: 10
Author(s): Brigitte Royer‐Pokora, Manfred Beier, Artur Brandt, Constanze Duhme, Maike Busch, Carmen de Torres, Hans-Dieter Royer, Jaume Mora
Software Mentions: 1
Published: over 8 years ago

10.1002/advs.202003047

PRMT5 Enables Robust STAT3 Activation via Arginine Symmetric Dimethylation of SMAD7
Cited by: 8
Author(s): Congcong Cai, Shuchen Gu, Yi Yu, Yezhang Zhu, Hanchenxi Zhang, Bo Yuan, Li Shen, Bing Yang, Xin‐Hua Feng
Software Mentions: 1
Published: over 5 years ago

10.1007/s00262-020-02825-z

PD-L1 amplification is associated with an immune cell rich phenotype in squamous cell cancer of the lung
Cited by: 14
Author(s): Torsten Goldmann, Sebastian Marwitz, Dörte Nitschkowski, Rosemarie Krupar, Max Backman, Hedvig Elfving, Viktoria Thurfjell, Amanda Lindberg, Hans Brunnström, Linnéa La Fleur, Artur Mezheyeuski, Johanna Sofia Margareta Mattsson, Johan Botling, Patrick Micke, Carina Strell
Software Mentions: 1
Published: over 5 years ago

10.1186/s12935-018-0724-7

Identification of a 6-gene signature predicting prognosis for colorectal cancer
Cited by: 61
Author(s): Shuguang Zuo, Gongpeng Dai, Xuequn Ren
Software Mentions: 1
Published: over 7 years ago

10.3390/antibiotics9110823

Antimicrobial Susceptibility Patterns and Wild-Type MIC Distributions of Anaerobic Bacteria at a German University Hospital: A Five-Year Retrospective Study (2015–2019)
Cited by: 8
Author(s): Mohamed Tarek Badr, Benjamin Blümel, Sandra Baumgartner, Johanna Komp, Georg Häcker
Software Mentions: 1
Published: over 5 years ago

10.1155/2021/5568411

Integrated Analysis of the Roles of RNA Binding Proteins and Their Prognostic Value in Clear Cell Renal Cell Carcinoma
Cited by: 5
Author(s): Bowen Wang, Haoran Zhao, Shaobin Ni, Beichen Ding
Software Mentions: 1
Published: about 5 years ago

10.3390/antibiotics10050555

Biological Properties of Bee Bread Collected from Apiaries Located across Greece
Cited by: 17
Author(s): Nikos Asoutis Didaras, Ioannis Kafantaris, Tilemachos G. Dimitriou, Chrysanthi Mitsagga, Katerina Karatasou, Ioannis Giavasis, Dimitris Stagos, Grigoris D. Amoutzias, Fani Hatjina, Dimitris Mossialos
Software Mentions: 1
Published: over 5 years ago

10.1186/s12935-019-0867-1

Systematically profiling the expression of eIF3 subunits in glioma reveals the expression of eIF3i has prognostic value in IDH-mutant lower grade glioma
Cited by: 19
Author(s): Rui‐Chao Chai, Ning Wang, Yuzhou Chang, Ke‐Nan Zhang, Jingjun Li, Junjie Niu, Fan Wu, Yuqing Liu, Yongzhi Wang
Software Mentions: 1
Published: about 7 years ago

10.1111/jcmm.16092

Characterizing heterogeneity of non‐small cell lung tumour microenvironment to identify signature prognostic genes
Cited by: 9
Author(s): Kai Mi, Fuhui Chen, Zhipeng Qian, Jing Chen, Dongxu Lv, Chunlong Zhang, Yanjun Xu, Hongguang Wang, Yuepeng Zhang, Yanan Jiang, Desi Shang
Software Mentions: 1
Published: almost 6 years ago

10.1111/jcmm.15835

Identification and validation of critical alternative splicing events and splicing factors in gastric cancer progression
Cited by: 6
Author(s): Haoran Feng, Zhijian Jin, Kun Liu, Yi Peng, Songyao Jiang, Changgang Wang, Jiele Hu, Xiaofeng Shen, Weihua Qiu, Xi Cheng, Ren Zhao
Software Mentions: 1
Published: almost 6 years ago

10.1111/jcmm.16190

Genome‐wide data mining to construct a competing endogenous RNA network and reveal the pivotal therapeutic targets of Parkinson's disease
Cited by: 4
Author(s): Jing Zhang, Ruiying Chen, Fan Shi, Pan Chyr Yang, Kun Sun, Xiaojing Yang, Yulan Jin
Software Mentions: 1
Published: over 5 years ago

10.1111/jcmm.14395

Identification and development of long non‐coding RNA‐associated regulatory network in colorectal cancer
Cited by: 18
Author(s): Hongda Pan, Jianji Pan, Shibo Song, Lei Ji, Hong Liu, Zhangru Yang
Software Mentions: 1
Published: about 7 years ago

10.7150/jca.50407

Systematic analysis of the function and prognostic value of RNA binding proteins in Colon Adenocarcinoma
Cited by: 1
Author(s): Xuewei Qi, Zeyu Liu, Chenglong Zhang, Ming Yang, Yuxiang Wan, Jinchang Huang, Lin Xu
Software Mentions: 1
Published: over 5 years ago

10.1186/s12935-020-01407-4

Screening and verification of long noncoding RNA promoter methylation sites in hepatocellular carcinoma
Cited by: 6
Author(s): Zhuo Lin, Xiaofeng Ni, Shengjie Dai, Hao Chen, Jianhui Chen, Boda Wu, Jian‐Yang Ao, Ke–Qing Shi, Hongwei Sun
Software Mentions: 1
Published: about 6 years ago

10.4049/jimmunol.2001245

The Roles of Type 2 Cytotoxic T Cells in Inflammation, Tissue Remodeling, and Prostaglandin (PG) D2 Production Are Attenuated by PGD2 Receptor 2 Antagonism
Cited by: 7
Author(s): Wentao Chen, Jian Luo, Ye Yuan, Ryan Hoyle, Wei Liu, Rowie Borst, Shamsah Kazani, Eric A. Shikatani, Veit J. Erpenbeck, Ian D. Pavord, Paul Klenerman, David A. Sandham, Luzheng Xue
Software Mentions: 1
Published: about 5 years ago

10.1186/s12935-020-01659-0

Exosomes from tamoxifen-resistant breast cancer cells transmit drug resistance partly by delivering miR-9-5p
Cited by: 27
Author(s): Jianhui Liu, Shao‐Liang Zhu, Wei Tang, Qinghua Huang, Mei Yan, Huawei Yang
Software Mentions: 1
Published: over 5 years ago

10.7150/jca.41733

Untargeted Metabolomics Analysis of Esophageal Squamous Cell Carcinoma Discovers Dysregulated Metabolic Pathways and Potential Diagnostic Biomarkers
Cited by: 23
Author(s): Zhaowei Zhu, Qi Zheng, Ji Zhang, Wenhua Xue, Lifeng Li, Zhibo Shen, Zeyun Li, Yanggang Yuan, Wenbin Wang, Jie Zhao
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA120.014948

The G4 resolvase RHAU modulates mRNA translation and stability to sustain postnatal heart function and regeneration
Cited by: 5
Author(s): Mingyang Jiang, Han Hu, Ke Zhao, Ruo‐Min Di, Xinyi Huang, Yingchao Shi, Yunyun Yue, Junwei Nie, Shan Yu, Wengong Wang, Zhongzhou Yang
Software Mentions: 1
Published: over 5 years ago

10.1186/s40104-020-00502-w

Palm oil protects α-linolenic acid from rumen biohydrogenation and muscle oxidation in cashmere goat kids
Cited by: 4
Author(s): Xue Wang, Graeme Martin, Qi Wen, Shulin Liu, Yinhao Li, Binlin Shi, Xiaoyu Guo, Yanli Zhao, Y.P. Guo, Sumei Yan
Software Mentions: 1
Published: almost 6 years ago

10.1001/jamanetworkopen.2020.14622

Prediction of Overall Survival Among Female Patients With Breast Cancer Using a Prognostic Signature Based on 8 DNA Repair–Related Genes
Cited by: 16
Author(s): Dai Zhang, Shuanying Yang, Yiche Li, Jia Yao, Jian Ruan, Yi Zheng, Yao Deng, Na Li, Bajin Wei, Ying Wu, Zhen Zhai, Jun Lyu, Zhijun Dai
Software Mentions: 1
Published: almost 6 years ago

10.3390/jcm10050998

High Comorbidity Burden in Patients with SLE: Data from the Community-Based Lupus Registry of Crete
Cited by: 21
Author(s): Irini Gergianaki, Panagiotis Garantziotis, Christina Adamichou, Ioannis Saridakis, G Spyrou, Prodromos Sidiropoulos, George Βertsias
Software Mentions: 1
Published: over 5 years ago

10.1186/s13613-021-00899-1

Platelet activation in critically ill COVID-19 patients
Cited by: 55
Author(s): Nader Yatim, Jérémy Boussier, Richard Chocron, Jérôme Hadjadj, Aurélien Philippe, Nicolas Gendron, Laura Barnabei, Bruno Charbit, Tali‐Anne Szwebel, Nicolas Carlier, Frédéric Pène, Célia Azoulay, Lina Khider, Tristan Mirault, Jean‐Luc Diehl, Coralie L. Guerin, Frédéric Rieux‐Laucat, Darragh Duffy, Solen Kernéis, David Smadja, Benjamin Terrier
Software Mentions: 1
Published: about 5 years ago

10.3390/insects12080745

Genome-Wide Identification of Neuropeptides and Their Receptors in an Aphid Endoparasitoid Wasp, Aphidius gifuensi
Cited by: 5
Author(s): Ke Xue, Zhenxiang Li, Yuqing Gao, Fang-Hua Liu, Zhenzhen Chen, He Tian, Tong‐Xian Liu, Yaobo Xu, Zhiwei Kang
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijerph17165751

The Response of Red Clover (Trifolium pratense L.) to Separate and Mixed Inoculations with Rhizobium leguminosarum and Azospirillum brasilense in Presence of Polycyclic Aromatic Hydrocarbons
Cited by: 6
Author(s): Karolina Furtak, Karolina Gawryjołek, Anna Gałązka, Jarosław Grządziel
Software Mentions: 1
Published: about 6 years ago

10.1186/s12935-020-01426-1

Identification of prognosis-related genes and construction of multi-regulatory networks in pancreatic cancer microenvironment by bioinformatics analysis
Cited by: 4
Author(s): Tong Li, Qiaofei Liu, Ronghua Zhang, Quan Liao, Yupei Zhao
Software Mentions: 1
Published: about 6 years ago

10.1093/jxb/ery335

bHLH92from sheepgrass acts as a negative regulator of anthocyanin/proanthocyandin accumulation and influences seed dormancy
Cited by: 39
Author(s): Pincang Zhao, Xiaoxia Li, Junjie Jia, Ye Yuan, Shuangyan Chen, Dongmei Qi, Long Cheng, Gongshe Liu
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijerph18168879

Spatiotemporal Change and the Natural–Human Driving Processes of a Megacity’s Coastal Blue Carbon Storage
Cited by: 6
Author(s): Wenbo Cai, Qing Zhu, Meitian Chen, Yongli Cai
Software Mentions: 1
Published: almost 5 years ago

10.3390/ani11071913

Preliminary Study: Proteomic Profiling Uncovers Potential Proteins for Biomonitoring Equine Melanocytic Neoplasm
Cited by: 4
Author(s): Parichart Tesena, Amornthep Kingkaw, Wanwipa Vongsangnak, Surakiet Pitikarn, Narumon Phaonakrop, Sittiruk Roytrakul, Attawit Kovitvadhi
Software Mentions: 1
Published: about 5 years ago

10.1093/jxb/eraa347

Developmentally controlled changes during Arabidopsis leaf development indicate causes for loss of stress tolerance with age
Cited by: 13
Author(s): Aakansha Kanojia, Saurabh Gupta, Maria Benina, Alisdair R. Fernie, Bernd Mueller‐Roeber, Tsanko Gechev, Paul P. Dijkwel
Software Mentions: 1
Published: almost 6 years ago

Projects: cran: pheatmap

Science Score: 75/100

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Papers Mentioning pheatmap 2,572