cran: pheatmap | Projects | Ecosyste.ms: Papers

10.1186/s12920-020-00823-9

Functional genomics of AP-2α and AP-2γ in cancers: in silico study
Cited by: 7
Author(s): Damian Kołat, Żaneta Kałuzińska, Magdalena Orzechowska, Andrzej K. Bednarek, Elżbieta Płuciennik
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12967-018-1640-2

Systematic analysis of lncRNA–miRNA–mRNA competing endogenous RNA network identifies four-lncRNA signature as a prognostic biomarker for breast cancer
Cited by: 188
Author(s): Chi Fan, Lei Ma, Ning Liu
Software Mentions: 1
Published: about 8 years ago

10.3390/molecules25010137

A Widely Metabolomic Analysis Revealed Metabolic Alterations of Epimedium Pubescens Leaves at Different Growth Stages
Cited by: 12
Author(s): Zhenxian Qin, Dengqun Liao, Yalan Chen, Chenyang Zhang, Ruipeng An, Qing Zeng, Xianen Li
Software Mentions: 1
Published: almost 7 years ago

10.3390/biom9070293

Genome-Wide Identification and Expression Profiling of CBL-CIPK Gene Family in Pineapple (Ananas comosus) and the Role of AcCBL1 in Abiotic and Biotic Stress Response
Cited by: 36
Author(s): Mohammad Aslam, Beenish Fakher, Bello Hassan Jakada, Lihua Zhao, Shijiang Cao, Yan Cheng, Yuan Qin
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-020-6479-2

Genome-wide analysis of the NAC transcription factor family in broomcorn millet (Panicum miliaceum L.) and expression analysis under drought stress
Cited by: 27
Author(s): Zhongying Shan, Yanmiao Jiang, Haiquan Li, Jian-Wei Guo, Ming Dong, Jianan Zhang, Guoqing Liu
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-07570-5

Chronic low-level expression of HIV-1 Tat promotes a neurodegenerative phenotype with aging
Cited by: 65
Author(s): Alex M. Dickens, Seung Wan Yoo, Alfred C. Chin, Jiadi Xu, Tory P. Johnson, Amanda L. Trout, Kurt F. Hauser, Norman J. Haughey
Software Mentions: 1
Published: about 9 years ago

10.1186/s12864-021-07501-9

Transcriptomes analysis reveals novel insight into the molecular mechanisms of somatic embryogenesis in Hevea brasiliensis
Cited by: 15
Author(s): Ying Wang, Hui‐Liang Li, Yong-Kai Zhou, Dong Guo, Jiahong Zhu, Shi-Qing Peng
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-76497-1

NLRP3 inflammasome deficiency attenuates metabolic disturbances involving alterations in the gut microbial profile in mice exposed to high fat diet
Cited by: 20
Author(s): Marina Sokolova, Kuan Yang, Simen Hyll Hansen, Mieke C. Louwe, Martin Kummen, Johannes Espolin Roksund Hov, Ivar Sjaastad, Rolf K. Berge, Bente Halvorsen, Pål Aukrust, Arne Yndestad, Trine Ranheim
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.55456

Phylogenetic variation in cortical layer II immature neuron reservoir of mammals
Cited by: 34
Author(s): Chiara La Rosa, Francesca Cavallo, Alessandra Pecora, Matteo Chincarini, Ugo Ala, Chris G. Faulkes, Juan Nácher, Bruno Cozzi, Chet C. Sherwood, Irmgard Amrein, Luca Bonfanti
Software Mentions: 1
Published: about 6 years ago

10.3389/fphar.2018.01492

Genome Sequences and Comparative Analysis of Two Extended-Spectrum Extensively-Drug Resistant Mycobacterium tuberculosis Strains
Cited by: 1
Author(s): Masood R Kayani, Yongchang Zheng, Fucun Xie, Kai Kang, Hanyu Li, Haitao Zhao
Software Mentions: 1
Published: almost 8 years ago

10.3390/molecules26030745

Fungicidal Activity of Volatile Organic Compounds Emitted by Burkholderia gladioli Strain BBB-01
Cited by: 15
Author(s): Yingtong Lin, Cheng-Cheng Lee, Wei-Ming Leu, Je-Jia Wu, Yu-Cheng Huang, Menghsiao Meng
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2018.00884

Analysis of the Metabolic Characteristics of Serum Samples in Patients With Multiple Myeloma
Cited by: 20
Author(s): Haiwei Du, Linyue Wang, Bo Liu, Wang Jin-ying, Haoxiang Su, Ting Zhang, Zhongxia Huang
Software Mentions: 1
Published: about 8 years ago

10.3389/fphar.2019.00140

Integrated Bioinformatics Analysis the Function of RNA Binding Proteins (RBPs) and Their Prognostic Value in Breast Cancer
Cited by: 46
Author(s): Ke Wang, Ling Li, Liang Fu, Yongqiang Yuan, Hongying Dai, Zhu Tianjin, Yue Zhou, Yuan Fang
Software Mentions: 1
Published: over 7 years ago

10.3389/fphar.2020.586350

Integrating Pharmacology and Gut Microbiota Analysis to Explore the Mechanism of Citri Reticulatae Pericarpium Against Reserpine-Induced Spleen Deficiency in Rats
Cited by: 24
Author(s): Yonghua Zheng, Xuan Zeng, Pan Chen, Tingting Chen, Wei Peng, Weiwei Su
Software Mentions: 1
Published: almost 6 years ago

10.3390/biomedicines9060658

Brain-Specific Gene Expression and Quantitative Traits Association Analysis for Mild Cognitive Impairment
Cited by: 3
Author(s): Shaoxun Yuan, Haitao Li, Yu Gu, Xiao Sun
Software Mentions: 1
Published: over 5 years ago

10.3389/fendo.2021.719843

3D Atlas of the Pituitary Gland of the Model Fish Medaka (Oryzias latipes)
Cited by: 12
Author(s): Muhammad Rahmad Royan, Khadeeja Siddique, Gergely Csúcs, Maja Puchades, Rasoul Nourizadeh-Lillabadi, Jan G. Bjaalie, Christiaan V. Henkel, Finn‐Arne Weltzien, Romain Fontaine
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-017-11448-x

Spatiotemporal heterogeneity of core functional bacteria and their synergetic and competitive interactions in denitrifying sulfur conversion-assisted enhanced biological phosphorus removal
Cited by: 17
Author(s): Yan Zhang, Man Yu, Jianhua Guo, Di Wu, Zheng-Shuang Hua, Guanghao Chen, Hui Lü
Software Mentions: 1
Published: about 9 years ago

10.3390/molecules22122255

Identification of the Sex-Biased Gene Expression and Putative Sex-Associated Genes in Eucommia ulmoides Oliver Using Comparative Transcriptome Analyses
Cited by: 14
Author(s): Wencai Wang, Xianzhi Zhang
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-12893-4

Shift in bacterioplankton diversity and structure: Influence of anthropogenic disturbances along the Yarlung Tsangpo River on the Tibetan Plateau, China
Cited by: 41
Author(s): Peifang Wang, Xun Wang, Chao Wang, Lingzhan Miao, Jun Hou, Qiusheng Yuan
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-14453-2

Quantitative proteomic Analysis Reveals up-regulation of caveolin-1 in FOXP3-overexpressed human gastric cancer cells
Cited by: 5
Author(s): Duyi Pan, Jing Gao, Xiaoqing Zeng, Guansheng Ma, Na Li, Xuanjing Huang, Xuanling Du, Qing Miao, Jie Lian, Lili Xu, Hu Zhou, Shiyao Chen
Software Mentions: 1
Published: almost 9 years ago

10.3389/fphar.2020.611060

Systematic Transcriptome Analysis Reveals the Inhibitory Function of Cinnamaldehyde in Non-Small Cell Lung Cancer
Cited by: 9
Author(s): Ru Chen, Juan Wu, Chang Lu, Tao Yan, Yu Qian, Huiqing Shen, Yujing Zhao, Jianzhen Wang, Ping Kong, Xinri Zhang
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers10090317

Transcriptome Signatures of Canine Mammary Gland Tumors and Its Comparison to Human Breast Cancers
Cited by: 18
Author(s): Kanghoon Lee, Hyoung-Min Park, Keun Hong Son, Teo Jeon Shin, Je‐Yoel Cho
Software Mentions: 1
Published: about 8 years ago

10.3389/fphar.2019.00726

Management of Adverse Events in Cancer Patients Treated With PD-1/PD-L1 Blockade: Focus on Asian Populations
Cited by: 18
Author(s): Jiqiao Yang, Xiujing He, Qing Lv, Jing Jing, Hubing Shi
Software Mentions: 1
Published: over 7 years ago

10.3389/fphar.2019.00729

Immunomodulatory Effects of Colistin on Macrophages in Rats by Activating the p38/MAPK Pathway
Cited by: 11
Author(s): Jin Wang, Weili Shao, Hongyu Niu, Tianli Yang, Yuning Wang, Yun Cai
Software Mentions: 1
Published: over 7 years ago

10.1186/s12943-017-0610-2

ITIH5 mediates epigenetic reprogramming of breast cancer cells
Cited by: 24
Author(s): Michael Rose, Vera Kloten, Erik Noetzel, Lukas Gola, Josef Ehling, Timon Heide, Steffen K. Meurer, Aljona Gaiko-Shcherbak, Antonio Sechi, Sebastian Huth, Ralf Weiskirchen, Oliver Klaas, Wiebke Antonopoulos, Qiong Lin, Wolfgang Wagner, Jürgen Veeck, Felix Gremse, Julia Steitz, Ruth Knüchel, Edgar Dahl
Software Mentions: 1
Published: over 9 years ago

10.3389/fphys.2020.00613

Schizochytrium limacinum Supplementation in a Low Fish-Meal Diet Improved Immune Response and Intestinal Health of Juvenile Penaeus monodon
Cited by: 11
Author(s): Shiwei Xie, Dan Wei, Beiping Tan, Yongjian Liu, Tian Liu, Jin Niu
Software Mentions: 1
Published: over 6 years ago

10.3389/fphys.2019.01298

Microarray Analysis of Gene Expression Provides New Insights Into Denervation-Induced Skeletal Muscle Atrophy
Cited by: 48
Author(s): Yuntian Shen, Ru Zhang, Liang Xu, Qiuxian Wan, Jianwei Zhu, Jing Gu, Ziwei Huang, Wenjing Ma, Mi Shen, Fei Ding, Hualin Sun
Software Mentions: 1
Published: almost 7 years ago

10.3389/fphys.2018.01729

Effect of Sublethal Doses of Imidacloprid on the Biological Performance of Aphid Endoparasitoid Aphidius gifuensis (Hymenoptera: Aphidiidae) and Influence on Its Related Gene Expression
Cited by: 33
Author(s): Zhiwei Kang, Fang-Hua Liu, Rui‐Ping Pang, He Tian, Tong‐Xian Liu
Software Mentions: 1
Published: almost 8 years ago

10.3389/fphys.2019.00750

Cardiac Proteome Profiling in Ischemic and Dilated Cardiomyopathy Mouse Models
Cited by: 19
Author(s): Danbo Lu, Xia Yan, Zhangwei Chen, Ao Chen, Yuan Wu, Jianguo Jia, Aijun Sun, Yunzeng Zou, Juying Qian, Junbo Ge
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-15369-7

First insights into the pleiotropic role of vrf (yedF), a newly characterized gene of Salmonella Typhimurium
Cited by: 2
Author(s): Clara Ballesté-Delpierre, Dietmar Fernández‐Orth, Mario Ferrer-Navarro, Ramón Díaz-Peña, Antonia Odena-Caballol, Eliandre de Oliveira, Anna Fàbrega, Jordi Vila
Software Mentions: 1
Published: almost 9 years ago

10.3389/fphys.2018.01043

Genome-Wide Identification, Characterization and Expression Analyses of Heat Shock Protein-Related Genes in a Highly Invasive Ascidian Ciona savignyi
Cited by: 22
Author(s): Xuena Huang, Shiguo Li, Yangchun Gao, Aibin Zhan
Software Mentions: 1
Published: about 8 years ago

10.3389/fphys.2019.00918

Linggui Zhugan Formula Improves Glucose and Lipid Levels and Alters Gut Microbiota in High-Fat Diet-Induced Diabetic Mice
Cited by: 32
Author(s): Rui Wu, Dandan Zhao, Ran An, Zhufeng Wang, Yuxiu Li, Shuxiong Bai, Qing Ni
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-14894-9

Female mice lacking Pald1 exhibit endothelial cell apoptosis and emphysema
Cited by: 12
Author(s): Isabel Egaña, Hiroshi Kaito, Anja Nitzsche, Lore Becker, Carolina Ballester‐López, Colin Niaudet, Milena Petkova, Wei Liu, Michael Vanlandewijck, Alexandra Vernaleken, Thomas Klopstock, Helmut Fuchs, Valérie Gailus‐Durner, Martin Hrabě de Angelis, Helge Rask‐Andersen, Henrik J. Johansson, Janne Lehtiö, Liqun He, Ali Önder Yildirim, Mats Hellström
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-020-78721-4

Phenotypic and genetic characterization of differential galacto-oligosaccharide utilization in Lactobacillus plantarum
Cited by: 11
Author(s): Jori Führen, Markus Schwalbe, Lucía Peralta-Marzal, Christiane Rösch, Henk A. Schols, Michiel Kleerebezem
Software Mentions: 1
Published: almost 6 years ago

10.3389/fphys.2017.01009

Discovery of a Potential Plasma Protein Biomarker Panel for Acute-on-Chronic Liver Failure Induced by Hepatitis B Virus
Cited by: 20
Author(s): Nan Zhou, Kuifeng Wang, Shanhua Fang, Xiaoyu Zhao, Tingting Huang, Huazhong Chen, Fei Yan, Yongzhi Tang, Hu Zhou, Jiansheng Zhu
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-15994-2

Metabolic regulatory oscillations in intertidal green seaweed Ulva lactuca against tidal cycles
Cited by: 12
Author(s): Vishal Gupta, Hemant R. Kushwaha
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41388-020-1267-7

Temporal activation of WNT/β-catenin signaling is sufficient to inhibit SOX10 expression and block melanoma growth
Cited by: 18
Author(s): Rexhep Uka, Christian Britschgi, Anja Krättli, Claudia Matter, Daniela Mihic, Michał Okoniewski, Marco Gualandi, Roger Stupp, Paolo Cinelli, Reinhard Dummer, Mitchell P. Levesque, Olga Shakhova
Software Mentions: 1
Published: over 6 years ago

10.3389/fphys.2018.01478

Bacillus thuringiensis Suppresses the Humoral Immune System to Overcome Defense Mechanism of Plutella xylostella
Cited by: 20
Author(s): Shuzhong Li, Xi Xu, Muhammad Shakeel, Jin Xu, Zhihua Zheng, Jianhua Zheng, Xiao‐Qiang Yu, Qian Zhao, Fengliang Jin
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12967-019-02145-6

Long non-coding RNA BZRAP1-AS1 silencing suppresses tumor angiogenesis in hepatocellular carcinoma by mediating THBS1 methylation
Cited by: 32
Author(s): Weiwei Wang, Guoyong Chen, Bing Wang, Zheng Yuan, Guangbo Liu, Biao Niu, Yongfeng Chen, Shaotang Zhou, Jin He, Hao Xue
Software Mentions: 1
Published: almost 7 years ago

10.3389/fendo.2020.00628

Correlation Between Fecal Metabolomics and Gut Microbiota in Obesity and Polycystic Ovary Syndrome
Cited by: 49
Author(s): Ling Zhou, Zhexin Ni, Jin Yu, Wen Cheng, Zhen Cai, Chaoqin Yu
Software Mentions: 1
Published: about 6 years ago

10.15252/embr.201949087

Npl3 stabilizes R‐loops at telomeres to prevent accelerated replicative senescence
Cited by: 12
Author(s): Lara Pérez-Martínez, Merve Öztürk, Falk Butter, Brian Luke
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-15-347

DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum
Cited by: 52
Author(s): Evelien M. Bunnik, Anton Polishko, Jacques Prudhomme, Nadia Ponts, Sarjeet S. Gill, Stefano Lonardi, Karine G. Le Roch
Software Mentions: 1
Published: over 12 years ago

10.3389/fpls.2016.01552

Genomic Organization, Phylogenetic and Expression Analysis of the B-BOX Gene Family in Tomato
Cited by: 66
Author(s): Zhuan Nan Chu, Xin Wang, Ying Li, Hui Yu, Jin Hua Li, Yingzhi Lu, Han Xia Li, Bo Ouyang
Software Mentions: 1
Published: almost 10 years ago

10.3389/fpls.2016.00027

Identification of MicroRNAs and Their Targets Associated with Fruit-Bagging and Subsequent Sunlight Re-exposure in the “Granny Smith” Apple Exocarp Using High-Throughput Sequencing
Cited by: 51
Author(s): Dong Qu, Fei Yan, Rui Meng, Xiaobing Jiang, Huijuan Yang, Gao Ziyi, Yiwei Dong, Yazhou Yang, Zhao Zhong
Software Mentions: 1
Published: over 10 years ago

10.3389/fpls.2020.578086

A Practical Protocol for a Comprehensive Evaluation of Sulfur Fumigation of Trichosanthis Radix Based on Both Non-Targeted and Widely Targeted Metabolomics
Cited by: 7
Author(s): Chuan-Zhi Kang, Chaogeng Lv, Jian Yang, Liping Kang, Wuqiang Ma, Wenjin Zhang, Sheng Wang, Tielin Wang, Jiahui Sun, Yang Ge, Luqi Huang, Lan-Ping Guo
Software Mentions: 1
Published: about 6 years ago

10.1186/s12864-020-6702-1

Genome wide screening and comparative genome analysis for Meta-QTLs, ortho-MQTLs and candidate genes controlling yield and yield-related traits in rice
Cited by: 39
Author(s): Bahman Khahani, Elahe Tavakol, Vahid Shariati, Fabio Fornara
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2020.00039

Transcriptional and Post-Transcriptional Regulation and Transcriptional Memory of Chromatin Regulators in Response to Low Temperature
Cited by: 23
Author(s): Kora Vyse, Léa Faivre, Melissa Romich, Majken Pagter, Daniel Schubert, Dirk K. Hincha, Ellen Zuther
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2016.01897

Characterization and Comparative Expression Profiling of Browning Response in Medinilla formosana after Cutting
Cited by: 7
Author(s): Wang Yan, Yiting Wang, Kunfeng Li, Xijiao Song, Jianping Chen
Software Mentions: 1
Published: almost 10 years ago

10.1155/2021/9798231

Identification of a Nine Immune-Related lncRNA Signature as a Novel Diagnostic Biomarker for Hepatocellular Carcinoma
Cited by: 15
Author(s): Mengqin Yuan, Yanqing Wang, Qinqian Sun, Shiyi Liu, Xian Shu, Fangfang Dai, Li Zhang, Yaqi Fan, Feiyan Wang, Dongyong Yang, Y. Zheng, Zhanfeng Deng, Wei Tan, Yeqiang Liu, Yanxiang Cheng
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-019-5975-8

Comparative genomic analysis revealed great plasticity and environmental adaptation of the genomes of Enterococcus faecium
Cited by: 36
Author(s): Zhi-Ping Zhong, Lai‐Yu Kwok, Qiangchuan Hou, Yaru Sun, Weicheng Li, Heping Zhang, Zhihong Sun
Software Mentions: 1
Published: about 7 years ago

10.1099/jmm.0.001384

Hospital transmission of borderline oxacillin-resistant Staphylococcus aureus evaluated by whole-genome sequencing
Cited by: 5
Author(s): Maria M. Konstantinovski, Karin Ellen Veldkamp, A.P.M. Lavrijsen, Thijs Bosch, M. E. M. Kraakman, Sam Nooij, Eric C. J. Claas, Jairo Gooskens
Software Mentions: 1
Published: about 5 years ago

10.1155/2021/6635936

Long Noncoding RNA RP11-357H14.17 Plays an Oncogene Role in Gastric Cancer by Activating ATF2 Signaling and Enhancing Treg Cells
Cited by: 9
Author(s): Xiaoli Tang, Wenting Wang, Meixiang Zhang, Chunlei Zuo, Hu Chengxia
Software Mentions: 1
Published: over 5 years ago

10.3892/ol.2019.11132

Prognostic implications of the BRAF‑V600E mutation in papillary thyroid carcinoma based on a new cut‑off age stratification
Cited by: 17
Author(s): Xiao‐Xiong Gan, Fei Shen, Xiaofang Deng, Jianhua Feng, Jia‐Bao Lu, Wei Cai, Lina Peng, Weipeng Zheng, Weijia Wang, Peidan Huang, Zhe Chen, Mingming Guo, Bo Xu
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-24266-6

Duplication and diversification of lectin receptor-like kinases (LecRLK) genes in soybean
Cited by: 26
Author(s): Pingli Liu, Yuan Huang, Peng-Hao Shi, Meng Yu, Jianbo Xie, Lulu Xie
Software Mentions: 1
Published: over 8 years ago

10.3389/fgene.2019.01284

Dysregulated lncRNA-miRNA-mRNA Network Reveals Patient Survival-Associated Modules and RNA Binding Proteins in Invasive Breast Carcinoma
Cited by: 12
Author(s): Yu Dong, Yang Xiao, Qi Shi, Chunjie Jiang
Software Mentions: 1
Published: over 6 years ago

10.1155/2020/1618527

Recurrence-Associated Multi-RNA Signature to Predict Disease-Free Survival for Ovarian Cancer Patients
Cited by: 8
Author(s): Yu Zhang, Qingjian Ye, Junxian He, Peigen Chen, Jing Wan, Jing Li, Yongtao Yang, Xiaomao Li
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2019.00461

A Network-Guided Genetic Approach to Identify Novel Regulators of Adventitious Root Formation in Arabidopsis thaliana
Cited by: 14
Author(s): Sergio Ibáñez, Helena Ruiz-Cano, María Á. Fernández, Ana Belén Sánchez-García, Joan Villanova, José Luis Micol, José Manuel Pérez-Pérez
Software Mentions: 1
Published: over 7 years ago

10.3390/microorganisms9081559

Culture Degeneration Reduces Sex-Related Gene Expression, Alters Metabolite Production and Reduces Insect Pathogenic Response in Cordyceps militaris
Cited by: 5
Author(s): Peter A. D. Wellham, Abdul Hafeez, Andrej Gregori, Matthias Brock, Dong-Hyun Kim, David Chandler, Cornelia H. de Moor
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2018.00879

Genome-Wide Identification and Characterization of Four Gene Families Putatively Involved in Cadmium Uptake, Translocation and Sequestration in Mulberry
Cited by: 35
Author(s): Wei Fan, Changying Liu, Boning Cao, Meiling Qin, Dan Long, Xiang Zhang, Aichun Zhao
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2018.01071

Terpenoid Emissions of Two Mediterranean Woody Species in Response to Drought Stress
Cited by: 30
Author(s): Simon Haberstroh, Jürgen Kreuzwieser, Raquel Lobo‐do‐Vale, María C. Caldeira, Maren Dubbert, Christiane Werner
Software Mentions: 1
Published: about 8 years ago

10.3390/microorganisms9081577

Comparative Genomics Revealing Insights into Niche Separation of the Genus Methylophilus
Cited by: 0
Author(s): Na Lin, Ye Tao, Peixin Gao, Yan Xu, Peng Xing
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2020.00256

From Chloroplast Biogenesis to Chlorophyll Accumulation: The Interplay of Light and Hormones on Gene Expression in Camellia sinensis cv. Shuchazao Leaves
Cited by: 46
Author(s): Linlin Liu, Ning Lin, Xuyang Liu, Shu Hua Yang, Wei Wang, Xiaochun Wan
Software Mentions: 1
Published: over 6 years ago

10.1155/2019/1902732

Genomic Analysis of Chilean Strains of<i>Campylobacter jejuni</i>from Human Faeces
Cited by: 13
Author(s): Arturo Levicán, Ignacio Ramos-Tapia, Isabel Briceño, Francisco Guerra, Benjamín Mena, Carmen Varela, Lorena Porte
Software Mentions: 1
Published: about 7 years ago

10.1186/s12872-020-01527-9

Identification of transcription factors MYC and C/EBPβ mediated regulatory networks in heart failure based on gene expression omnibus datasets
Cited by: 2
Author(s): Haiwei Wang, Xinrui Wang, Liangpu Xu, Hua Cao
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2019.00372

Hemorrhagic Fever-Causing Arenaviruses: Lethal Pathogens and Potent Immune Suppressors
Cited by: 50
Author(s): Morgan Brisse, Hinh Ly
Software Mentions: 1
Published: over 7 years ago

10.3389/fcimb.2018.00005

Identification and Characterization of Blood and Neutrophil-Associated Microbiomes in Patients with Severe Acute Pancreatitis Using Next-Generation Sequencing
Cited by: 59
Author(s): Qiurong Li, Chenyang Wang, Chunbo Tang, Xiuhe Zhao, Qi He, Jieshou Li
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2021.705286

Transcript Profiling of MIKCc MADS-Box Genes Reveals Conserved and Novel Roles in Barley Inflorescence Development
Cited by: 13
Author(s): Hendrik N. J. Kuijer, Neil J. Shirley, Shi F. Khor, Shi Jin, Julian G. Schwerdt, Dabing Zhang, Gang Li, Rachel A. Burton
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2017.01936

Role of Gut Microbiota on Cardio-Metabolic Parameters and Immunity in Coronary Artery Disease Patients with and without Type-2 Diabetes Mellitus
Cited by: 73
Author(s): Lidia Sánchez-Alcoholado, Daniel Castellano‐Castillo, Laura Jordán-Martínez, Isabel Moreno-Indias, Pilar Cardila-Cruz, Daniel Elena, Antonio J. Muñoz-García, María Isabel Queipo‐Ortuño, Manuel Jiménez‐Navarro
Software Mentions: 1
Published: almost 9 years ago

10.3389/fpls.2020.581693

Effective Defense of Aleppo Pine Against the Giant Scale Marchalina hellenica Through Ecophysiological and Metabolic Changes
Cited by: 5
Author(s): Mariangela N. Fotelli, Fani G. Lyrou, Dimitrios Ν. Avtzis, Daniel Maurer, Heinz Rennenberg, Gavriil Spyroglou, Andrea Polle, K. Radoglou
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2016.01800

Genome-Wide Analysis of Soybean JmjC Domain-Containing Proteins Suggests Evolutionary Conservation Following Whole-Genome Duplication
Cited by: 32
Author(s): Yapeng Han, Xiangyong Li, Lin Cheng, Yanchun Liang, Hui Wang, Danxia Ke, Hongyu Yuan, Liangsheng Zhang, Lei Wang
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-018-28220-4

Supraphysiological Levels of Oxygen Exposure During the Neonatal Period Impairs Signaling Pathways Required for Learning and Memory
Cited by: 9
Author(s): Manimaran Ramani, Ranjit Kumar, Brian Halloran, Charitharth Vivek Lal, Namasivayam Ambalavanan, Lori L. McMahon
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2017.01739

Arbuscular Mycorrhizal Symbiosis Alleviates Salt Stress in Black Locust through Improved Photosynthesis, Water Status, and K+/Na+ Homeostasis
Cited by: 126
Author(s): Jie Chen, Haoqiang Zhang, Xinlu Zhang, Ming Tang
Software Mentions: 1
Published: almost 9 years ago

10.3389/fpls.2021.722810

Transcriptomic Profiling Reveals Shared Signalling Networks Between Flower Development and Herbivory-Induced Responses in Tomato
Cited by: 3
Author(s): Lanlan Ke, Yangzi Wang, M. Schäfer, Thomas Städler, Rensen Zeng, Jörg Fabian, Hannier Pulido, Consuelo Μ. De Moraes, Yuanyuan Song, Shuqing Xu
Software Mentions: 1
Published: about 5 years ago

10.1155/2020/2073690

Identification of Potential Biomarkers Associated with Basal Cell Carcinoma
Cited by: 5
Author(s): Yong Liu, Hui Liu, Queqiao Bian
Software Mentions: 1
Published: over 6 years ago

10.3390/foods10010124

Quantitative and Comparative Investigation of Plasmalogen Species in Daily Foodstuffs
Cited by: 14
Author(s): Yue Wu, Zhen Chen, Jiaping Jia, Hitoshi Chiba, Shu‐Ping Hui
Software Mentions: 1
Published: over 5 years ago

10.1155/2021/5013565

Analysis of Differentially Expressed Genes in the Dentate Gyrus and Anterior Cingulate Cortex in a Mouse Model of Depression
Cited by: 9
Author(s): Yanfei Wei, Keming Qi, Yi Yu, Wei Lü, Wei Xu, Cheng-Zi Yang, Lin Yu
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms7120678

Insights into Antagonistic Interactions of Multidrug Resistant Bacteria in Mangrove Sediments from the South Indian State of Kerala
Cited by: 12
Author(s): Madangchanok Imchen, Ravali Krishna Vennapu, Preetam Ghosh, Ranjith Kumavath
Software Mentions: 1
Published: almost 7 years ago

10.1002/fsn3.1010

Effect of different<i>Lactobacillus</i>species on volatile and nonvolatile flavor compounds in juices fermentation
Cited by: 37
Author(s): Shumao Cui, Nan Zhao, Wenwei Liu, Fang Zhao, Zheng SongYou, Weijun Wang, Wei Chen
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2018.00503

Genome-Wide Association Studies of 11 Agronomic Traits in Cassava (Manihot esculenta Crantz)
Cited by: 38
Author(s): Shengkui Zhang, Xin Chen, Cheng Lü, Jianqiu Ye, Meiling Zou, Kundian Lu, Subin Feng, Jinli Pei, Chen Liu, Xiaojin Zhou, Ping-An Ma, Zhaogui Li, Cuijuan Liu, Qi Liao, Zhiqiang Xia, Wenquan Wang
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2020.00333

Does Molecular and Structural Evolution Shape the Speedy Grass Stomata?
Cited by: 11
Author(s): Yuanyuan Wang, Zhong‐Hua Chen
Software Mentions: 1
Published: over 6 years ago

10.3390/nu12123828

Comparison of Different Dietary Indices as Predictors of Inflammation, Oxidative Stress and Intestinal Microbiota in Middle-Aged and Elderly Subjects
Cited by: 19
Author(s): Sergio Ruiz-Saavedra, Nuria Salazar, Ana Suárez, Clara G. de los Reyes‐Gavilán, Miguel Gueimonde, Sonia González
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12864-020-6715-9

Genome-wide analysis of the citrus B3 superfamily and their association with somatic embryogenesis
Cited by: 10
Author(s): Zheng Liu, Xiao Xia Ge, Xiao Meng Wu, Qiang Xu, Ross G. Atkinson, Guo Wen
Software Mentions: 1
Published: over 6 years ago

10.18632/aging.104172

Neurofilament degradation is involved in laparotomy-induced cognitive dysfunction in aged rats
Cited by: 3
Author(s): Yanyan Cao, Taotao Liu, Zhengqian Li, Yang Jiao, Lijun Ma, Xinning Mi, Ning Yang, Aihua Qi, Xiangyang Guo, Aizhong Wang
Software Mentions: 1
Published: almost 6 years ago

10.18632/aging.202606

Identification of miRNAs as diagnostic and prognostic markers in hepatocellular carcinoma
Cited by: 6
Author(s): Hao Liang, Mingxing Xu, Xiong Zhang, Kunpeng Hu, Jiarui Yang, Mingbo Cao, Zhaozhong Zhong, Zhicheng Yao, Meihai Deng, Bo Liu
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-34183-3

The biological role of N-acyl-homoserine lactone-based quorum sensing (QS) in EPS production and microbial community assembly during anaerobic granulation process
Cited by: 42
Author(s): Haijun Ma, Sijia Ma, Haidong Hu, Lili Ding, Hongqiang Ren
Software Mentions: 1
Published: almost 8 years ago

10.18632/aging.104099

Comprehensive circular RNA expression profiling constructs a ceRNA network and identifies hsa_circ_0000673 as a novel oncogene in distal cholangiocarcinoma
Cited by: 5
Author(s): Xin Zhao, Xinxue Zhang, Zhigang Zhang, Zhe Liu, Jiang Zhu, Shaocheng Lyu, Lixin Li, Ren Lang, Qiang He
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-018-35058-3

Correlation between genomic index lesions and mpMRI and 68Ga-PSMA-PET/CT imaging features in primary prostate cancer
Cited by: 26
Author(s): Claudia Kesch, Jan Philipp Radtke, Axel Wintsche, Manuel Wiesenfarth, Mariska Luttje, Claudia Gasch, Svenja Dieffenbacher, Carine Pecqueux, Doğu Teber, Gencay Hatiboglu, Joanne Nyarangi‐Dix, Tobias Simpfendörfer, Gita Schönberg, Antonia Dimitrakopoulou-Strauß, Martin T. Freitag, Anette Duensing, Carsten Grüllich, Dirk Jäger, Michael Goetz, Niels Grabe, Michal R. Schweiger, Sascha Pahernik, Sven Perner, Esther Herpel, Wilfried Roth, Kathrin Wieczorek, Klaus H. Maier‐Hein, Jürgen Debus, Uwe Haberkorn, Frederik L. Giesel, Joerg Galle, Boris Hadaschik, Heinz–Peter Schlemmer, Markus Hohenfellner, David Bonekamp, Holger Sültmann, Stefan Duensing
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2016.01212

Fluorescent Pseudomonas Strains with only Few Plant-Beneficial Properties Are Favored in the Maize Rhizosphere
Cited by: 38
Author(s): Jordan Vacheron, Yvan Moënne‐Loccoz, Audrey Dubost, Maximilien Gonçalves-Martins, Daniel Müller, Claire Prigent‐Combaret
Software Mentions: 1
Published: about 10 years ago

10.1186/s12885-019-5802-2

Analysis of the transcriptomic features of microsatellite instability subtype colon cancer
Cited by: 9
Author(s): Haiwei Wang, Xinrui Wang, Liangpu Xu, Ji Zhang, Hua Cao
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-35403-6

In-depth validation of total HIV-1 DNA assays for quantification of various HIV-1 subtypes
Cited by: 26
Author(s): Sofie Rutsaert, Ward De Spiegelaere, Clarissa Van Hecke, Marie‐Angélique De Scheerder, Maja Kiselinova, Karen Vervisch, Wim Trypsteen, Linos Vandekerckhove
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2020.00630

Genome Assembly and Annotation of Soft-Shelled Adlay (Coix lacryma-jobi Variety ma-yuen), a Cereal and Medicinal Crop in the Poaceae Family
Cited by: 17
Author(s): Sang-Ho Kang, Byeollee Kim, Beom-Soon Choi, Hyun Oh Lee, Nam Hoon Kim, Seung-Jae Lee, Hye Sik Kim, Myung Ju Shin, Hyo-Won Kim, Kyunghyun Nam, Kyoung Dae Kang, Soo-Jin Kwon, Tae‐Jin Oh, Sang-Choon Lee, Chang-Kug Kim
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-35625-8

Genome-wide identification and characterization of CKIN/SnRK gene family in Chlamydomonas reinhardtii
Cited by: 31
Author(s): Francisco Colina, Joana Amaral, María Teresa Doménech Carbó, Glória Pinto, Amadeu M.V.M. Soares, María Jesús Cañal, Luís Valledor
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2020.623993

Circulating Myeloid Regulatory Cells: Promising Biomarkers in B-Cell Lymphomas
Cited by: 4
Author(s): Juliette Ferrant, Faustine Lhomme, Simon Le Gallou, Jonathan M. Irish, Mikaël Roussel
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2017.00976

Autoantibody Repertoire in APECED Patients Targets Two Distinct Subgroups of Proteins
Cited by: 38
Author(s): Dmytro Fishman, Kai Kisand, Christina Hertel, Mike Rothe, Anu Remm, Maire Pihlap, Priit Adler, Jaak Vilo, Aleksandr Peet, Antonella Meloni, Katarina Trebušak Podkrajšek, Tadej Battelino, Øyvind Bruserud, Anette S. B. Wolff, Eystein S. Husebye, Nicolas Kluger, Kai Krohn, Annamari Ranki, Hedi Peterson, Adrian Hayday, Pärt Peterson
Software Mentions: 1
Published: about 9 years ago

10.3390/microorganisms9040782

Different Responses of Bacterial and Archaeal Communities in River Sediments to Water Diversion and Seasonal Changes
Cited by: 12
Author(s): Jiali Lv, Yangdan Niu, Rong Yuan, Shiqin Wang
Software Mentions: 1
Published: over 5 years ago

10.1186/s12885-020-07293-3

DLBCL with amplification of JAK2/PD-L2 exhibits PMBCL-like CNA pattern and worse clinical outcome resembling those with MYD88 L265P mutation
Cited by: 1
Author(s): Xuemin Xue, Wenting Huang, Tian Qiu, Lei Guo, Ying Jin, Ning Lv
Software Mentions: 1
Published: about 6 years ago

10.1186/s40364-020-00259-4

Development of acoustically isolated extracellular plasma vesicles for biomarker discovery in allogeneic hematopoietic stem cell transplantation
Cited by: 5
Author(s): Hooi Ching Lim, Shamit Soneji, Róbert Pálmason, Stig Lenhoff, Thomas Laurell, Stefan Scheding
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.54095

Circulating myeloid cells invade the central nervous system to mediate cachexia during pancreatic cancer
Cited by: 32
Author(s): Kevin G. Burfeind, Xiao‐Dong Zhu, Mason A. Norgard, Peter R. Levasseur, Christian Huisman, Abigail C. Buenafe, Brennan Olson, Katherine A. Michaelis, Eileen Ruth S. Torres, Sophia Jeng, Shannon K. McWeeney, Jacob Raber, Daniel L. Marks
Software Mentions: 1
Published: over 6 years ago

10.3390/ani11071913

Preliminary Study: Proteomic Profiling Uncovers Potential Proteins for Biomonitoring Equine Melanocytic Neoplasm
Cited by: 4
Author(s): Parichart Tesena, Amornthep Kingkaw, Wanwipa Vongsangnak, Surakiet Pitikarn, Narumon Phaonakrop, Sittiruk Roytrakul, Attawit Kovitvadhi
Software Mentions: 1
Published: over 5 years ago

10.1007/s10142-019-00672-5

Gene expression profiles between cystic and solid vestibular schwannoma indicate susceptible molecules and pathways in the cystic formation of vestibular schwannoma
Cited by: 6
Author(s): Shuang Yan, Quan Wang, Zirong Huo, Tao Yang, Xianghua Yin, Zhaoyan Wang, Zhihua Zhang, Hao Wu
Software Mentions: 1
Published: over 7 years ago

Projects: cran: pheatmap

Science Score: 75/100

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Papers Mentioning pheatmap 2,572