cran: pheatmap | Projects | Ecosyste.ms: Papers

10.3389/fimmu.2021.612144

Hepcidin Upregulation in Lung Cancer: A Potential Therapeutic Target Associated With Immune Infiltration
Cited by: 38
Author(s): Yumei Fan, Bing Liu, Fei Chen, Zhen Song, Bihui Han, Yanxiu Meng, Jiajie Hou, Pengxiu Cao, Yan‐Zhong Chang, Karsoon Tan
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2020.00029

CD44 Loss Disrupts Lung Lipid Surfactant Homeostasis and Exacerbates Oxidized Lipid-Induced Lung Inflammation
Cited by: 24
Author(s): Yifei Dong, Arif A. Arif, Jian Guo, Zongyi Ha, Sally S. M. Lee-Sayer, Grace F. T. Poon, Manisha Dosanjh, Calvin D. Roskelley, Tao Huan, Pauline Johnson
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2021.653085

Kinetics of the Cellular and Transcriptomic Response to Eimeria maxima in Relatively Resistant and Susceptible Chicken Lines
Cited by: 12
Author(s): Abi Bremner, Sung-Won Kim, Katrina M. Morris, Matthew J. Nolan, Dominika Borowska, Wu Z, Fiona M. Tomley, Damer P. Blake, Rachel Hawken, Pete Kaiser, Lonneke Vervelde
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2015.00055

Exploring salivary microbiota in AIDS patients with different periodontal statuses using 454 GS-FLX Titanium pyrosequencing
Cited by: 19
Author(s): Fang Zhang, Shenghua He, Jie-Qi Jin, Guangyan Dong, Hong-Kun Wu
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-021-89294-1

A candidate gene identified in converting platycoside E to platycodin D from Platycodon grandiflorus by transcriptome and main metabolites analysis
Cited by: 12
Author(s): Xinglong Su, Yingying Liu, Lu Han, Zhaojian Wang, Mengyang Cao, Liping Wu, Weimin Jiang, Fancheng Meng, Xiaohu Guo, Nianjun Yu, Shuangying Gui, Shihai Xing, Daiyin Peng
Software Mentions: 1
Published: over 5 years ago

10.18632/oncotarget.19916

Establishment of a neuroendocrine prostate cancer model driven by the RNA splicing factor SRRM4
Cited by: 20
Author(s): Yinan Li, Ruiqi Chen, Mary Bowden, Fan Mo, Yen-Yi Lin, Martin Gleave, Colin C. Collins, Xuesen Dong
Software Mentions: 1
Published: about 9 years ago

10.3389/fcimb.2020.576185

The in vitro Effects of the Probiotic Strain, Lactobacillus casei ZX633 on Gut Microbiota Composition in Infants With Diarrhea
Cited by: 8
Author(s): Xing Wang, Miao Zhang, Weidong Wang, Haoxin Lv, Hua Zhong, Yuan Liu, Zhongfang Tan
Software Mentions: 1
Published: about 6 years ago

10.3389/fcimb.2021.671694

Integrative Analysis of HTNV Glycoprotein Derived MHC II Epitopes by In Silico Prediction and Experimental Validation
Cited by: 3
Author(s): Hao Sun, Zhenhua Lü, Guoyun Xuan, Ning Liu, Tianhu Wang, Yang Liu, Mingfu Lan, Jiahao Xu, Yuancai Feng, Shuang Xu, You Lu, Baozeng Sun, Jinpeng Zhang, Xiyang Zhang, Yuanjie Sun, Shuya Yang, Yun Zhang, Yusi Zhang, Long Cheng, Duyin Jiang, Kun Yang
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2021.687489

Differential Regulation of GPCRs—Are GRK Expression Levels the Key?
Cited by: 28
Author(s): Edda S F Matthees, Raphael Haider, Carsten Hoffmann, Julia Drube
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-90887-z

Role of cytoplasmic localization of maspin in promoting cell invasion in breast cancer with aggressive phenotype
Cited by: 5
Author(s): Tomohiko Sakabe, Makoto Wakahara, Goshi Shiota, Yoshihisa Umekita
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2020.00450

Conditional Knockout of PKC-δ in Osteoclasts Favors Bone Mass Accrual in Males Due to Decreased Osteoclast Function
Cited by: 5
Author(s): Shangfu Li, Tianwei He, Depeng Wu, Liangming Zhang, Ruiqiang Chen, Bin Liu, Jinbo Yuan, Jennifer Tickner, An Qin, Jiake Xu, Limin Rong
Software Mentions: 1
Published: over 6 years ago

10.3389/fcell.2019.00271

The Long Non-coding RNA ZFAS1 Sponges miR-193a-3p to Modulate Hepatoblastoma Growth by Targeting RALY via HGF/c-Met Pathway
Cited by: 20
Author(s): Xichun Cui, Zhifang Wang, Liwen Liu, Xin Liu, Dandan Zhang, Jianhao Li, Jianming Zhu, Juntao Pan, Da Zhang, Guangying Cui
Software Mentions: 1
Published: almost 7 years ago

10.3389/fcell.2021.620248

Investigating Molecular Determinants of Cancer Cell Resistance to Ionizing Radiation Through an Integrative Bioinformatics Approach
Cited by: 8
Author(s): Halil Ibrahim Toy, Gökhan Karakülah, Panagiota I. Kontou, Hani Alotaibi, Alexandros G. Georgakilas, Athanasia Pavlopoulou
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2020.00625

The Dysregulation and Prognostic Analysis of STRIPAK Complex Across Cancers
Cited by: 8
Author(s): Ruiling Xie, Feng Wen, Yong Qin
Software Mentions: 1
Published: about 6 years ago

10.3389/fcell.2021.632372

Inhibition of TGF-β/Smad3 Signaling Disrupts Cardiomyocyte Cell Cycle Progression and Epithelial–Mesenchymal Transition-Like Response During Ventricle Regeneration
Cited by: 8
Author(s): Yuanyuan Peng, Wenyuan Wang, Yunzheng Fang, Haichen Hu, Nannan Chang, Meijun Pang, Ye-Fan Hu, Xueyu Li, Liang Han, Jing-Wei Xiong, Ruilin Zhang
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.642948

Cancer-Preventive Role of Bone Marrow-Derived Mesenchymal Stem Cells on Colitis-Associated Colorectal Cancer: Roles of Gut Microbiota Involved
Cited by: 22
Author(s): Ruohang He, Chaoqun Han, Ying Liu, Wei Qian, Xiaohua Hou
Software Mentions: 1
Published: over 5 years ago

10.18632/oncotarget.18802

Dexamethasone affects cell growth/apoptosis/chemosensitivity of colon cancer via glucocorticoid receptor α/NF-κB
Cited by: 23
Author(s): Jia He, Jinming Zhou, Weiwen Yang, Qi Zhou, Xi Liu, Xiaowu Pang, Jianjun Li, Feng Pan, Houjie Liang
Software Mentions: 1
Published: over 9 years ago

10.3389/fcell.2021.686395

Global Screening of LUBAC and OTULIN Interacting Proteins by Human Proteome Microarray
Cited by: 0
Author(s): Lijie Zhou, Yingwei Ge, Yesheng Fu, Bo Wu, Yong Zhang, Lei Li, Chun-Ping Chu, Siying Wang, Lingqiang Zhang
Software Mentions: 1
Published: over 5 years ago

10.1186/s13613-021-00899-1

Platelet activation in critically ill COVID-19 patients
Cited by: 55
Author(s): Nader Yatim, Jérémy Boussier, Richard Chocron, Jérôme Hadjadj, Aurélien Philippe, Nicolas Gendron, Laura Barnabei, Bruno Charbit, Tali‐Anne Szwebel, Nicolas Carlier, Frédéric Pène, Célia Azoulay, Lina Khider, Tristan Mirault, Jean‐Luc Diehl, Coralie L. Guerin, Frédéric Rieux‐Laucat, Darragh Duffy, Solen Kernéis, David Smadja, Benjamin Terrier
Software Mentions: 1
Published: about 5 years ago

10.3390/foods10010124

Quantitative and Comparative Investigation of Plasmalogen Species in Daily Foodstuffs
Cited by: 14
Author(s): Yue Wu, Zhen Chen, Jiaping Jia, Hitoshi Chiba, Shu‐Ping Hui
Software Mentions: 1
Published: over 5 years ago

10.1002/fsn3.1010

Effect of differentLactobacillusspecies on volatile and nonvolatile flavor compounds in juices fermentation
Cited by: 37
Author(s): Shumao Cui, Nan Zhao, Wenwei Liu, Fang Zhao, Zheng SongYou, Weijun Wang, Wei Chen
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-15-580

Dual transcriptomics of virus-host interactions: comparing two Pacific oyster families presenting contrasted susceptibility to ostreid herpesvirus 1
Cited by: 82
Author(s): Amélie Segarra, Florian Mauduit, Nicole Faury, Suzanne Trancart, Lionel Dégremont, Delphine Tourbiez, Philippe Haffner, Valérie Barbosa-Solomieu, Jean-François Pépin, Marie‐Agnès Travers, Tristan Renault
Software Mentions: 1
Published: about 12 years ago

10.1002/2211-5463.12563

New biomarkers of Kawasaki disease identified by urine proteomic analysis
Cited by: 7
Author(s): Huimin Hu, Hongwu Du, Jiawen Cui, Deqin Feng, Zhenhong Du
Software Mentions: 1
Published: almost 8 years ago

10.1186/s40662-021-00248-0

Intravitreal brimonidine inhibits form-deprivation myopia in guinea pigs
Cited by: 5
Author(s): Yifang Yang, Jang‐Yen Wu, Dongde Wu, Qi Wei, Tan Zhong, Jun Yang, Xiaowei Yang, Mei-zhen Zeng, Xingwu Zhong
Software Mentions: 1
Published: about 5 years ago

10.1038/s12276-021-00661-4

Pituitary P62 deficiency leads to female infertility by impairing luteinizing hormone production
Cited by: 9
Author(s): Xing Li, Ling Zhou, Guiliang Peng, Mingyu Liao, Linlin Zhang, Hua Hu, Линг Лонг, Xuefeng Tang, Hua Qu, Jianghua Shao, Cong-Yi Wang, Min Long
Software Mentions: 1
Published: about 5 years ago

10.1186/s13072-016-0109-x

MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones
Cited by: 38
Author(s): Sara El Kennani, Annie Adrait, Alexey K. Shaytan, Saadi Khochbin, Christophe Bruley, Anna R. Panchenko, David Landsman, Delphine Pflieger, Jérôme Govin
Software Mentions: 1
Published: over 9 years ago

10.1080/15592294.2020.1767372

Neuronal Lhx1 expression is regulated by DNMT1-dependent modulation of histone marks
Cited by: 15
Author(s): Judit Symmank, Cathrin Bayer, Julia Reichard, Daniel Pensold, Geraldine Zimmer-Bensch
Software Mentions: 1
Published: over 6 years ago

10.1002/ece3.7127

As old as the hills: Pliocene palaeogeographical processes influence patterns of genetic structure in the widespread, common shrub Banksia sessilis
Cited by: 5
Author(s): Heidi Nistelberger, Sarah‐Louise Tapper, David Coates, Shelley McArthur, Margaret Byrne
Software Mentions: 1
Published: almost 6 years ago

10.17179/excli2020-3083

Angiotensin receptor blocker Losartan inhibits tumor growth of colorectal cancer.
Cited by: 5
Author(s): Milad Hashemzehi, Farzad Rahmani, Mahdieh Khoshakhlagh, Amir Avan, Fereshteh Asgharzadeh, Farnaz Barneh, Reyhaneh Moradi‐Marjaneh, Atena Soleimani, Hamid Fiuji, Gordon A. Ferns, Mikhail Ryzhikov, Mohieddin Jafari, Majid Khazaei, Seyed Mahdi Hassanian
Software Mentions: 1
Published: over 5 years ago

10.18632/oncotarget.22318

Identification of a three miRNA signature as a novel potential prognostic biomarker in patients with bladder cancer
Cited by: 13
Author(s): Fei Peng, Hui Li, Hailang Xiao, Ling Li, Yan Li, Yi Wu
Software Mentions: 1
Published: almost 9 years ago

10.15252/embr.202051981

N ‐acetylaspartate release by glutaminolytic ovarian cancer cells sustains protumoral macrophages
Cited by: 19
Author(s): Alessio Menga, Maria Favia, Iolanda Spera, Maria Carmela Vegliante, Rosanna Gissi, Anna Grassi, Luna Laera, Alessandro Campanella, Andrea Gerbino, Giovanna Carrà, Marcella Canton, Vera Loizzi, Ciro Leonardo Pierri, Gennaro Cormio, Massimiliano Mazzone, Alessandra Castegna
Software Mentions: 1
Published: about 5 years ago

10.15252/embr.201949087

Npl3 stabilizes R‐loops at telomeres to prevent accelerated replicative senescence
Cited by: 12
Author(s): Lara Pérez-Martínez, Merve Öztürk, Falk Butter, Brian Luke
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-021-94831-z

Transcriptome profiling reveals potential genes involved in browning of fresh-cut eggplant (Solanum melongena L.)
Cited by: 6
Author(s): Xiaohui Liu, Aidong Zhang, Jie Zhao, Jing Shang, Zongwen Zhu, Xuexia Wu, Dingshi Zha
Software Mentions: 1
Published: about 5 years ago

10.1242/dmm.030064

p53-independent DUX4 pathology
Cited by: 20
Author(s): Darko Bosnakovski, Micah D. Gearhart, Erik A. Toso, Olivia O. Recht, Anja Cucak, Abhinav K. Jain, Michelle C. Barton, Michael Kyba
Software Mentions: 1
Published: almost 10 years ago

10.1016/j.dib.2020.105179

Proteome data to explore the axolotl limb regeneration capacity at neotenic and metamorphic stages
Cited by: 2
Author(s): Turan Demircan, Mustafa Sibai, Ebru Altuntaş
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-021-95901-y

Untargeted metabolomics of purple and orange-fleshed sweet potatoes reveals a large structural diversity of anthocyanins and flavonoids
Cited by: 13
Author(s): Alexandra Bennett, Elizabeth H. Mahood, Kai Fan, Gaurav D. Moghe
Software Mentions: 1
Published: about 5 years ago

10.1016/j.dib.2020.105523

Data analysis of PD-1 antibody in the treatment of melanoma patients
Cited by: 2
Author(s): Ting Li, Chao Zhang, Gang Zhao, Xinwei Zhang, Mengze Hao, Shafat Hassan, Min Zhang, Hong Zheng, Da Yang, Liang Liu, Farideh Mehraein-Ghomi, Xu Bai, Kexin Chen, Wei Zhang, Jilong Yang
Software Mentions: 1
Published: over 6 years ago

10.1155/2021/2649123

Identification of a Transcription Factor Signature That Can Predict Breast Cancer Survival
Cited by: 4
Author(s): Chi Fan, Jianshi Du, Liu Ning
Software Mentions: 1
Published: over 5 years ago

10.1002/cti2.1105

Prominent immune signatures of T cells are specifically associated with indolent B‐cell lymphoproliferative disorders and predict prognosis
Cited by: 3
Author(s): Shuhua Yi, Yu Zhang, Wei Xiong, Weiwei Chen, Zhaohua Hou, Yang Yang, Yuting Yan, Yunbo Wei, Rui Cui, Huijun Wang, Zhen Yu, Heng Li, Zengjun Li, Wei Liu, Rui Lv, Tingyu Wang, Kun Ru, Dehui Zou, Minglei Shu, Lugui Qiu, Di Yu
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13020-020-00354-6

Integrated metabolomic and transcriptomic profiling reveals the tissue-specific flavonoid compositions and their biosynthesis pathways in Ziziphora bungeana
Cited by: 9
Author(s): Jiang He, Wei‐Jun Yang, Bo Cheng, Lina Ma, Dilinuer Tursunjiang, Zenghui Ding, Yong Li, Zhaofeng Wang, Yimian Ma, Li Guan
Software Mentions: 1
Published: about 6 years ago

10.3390/cells8121637

Identification and Validation Model for Informative Liquid Biopsy-Based microRNA Biomarkers: Insights from Germ Cell Tumor In Vitro, In Vivo and Patient-Derived Data
Cited by: 65
Author(s): João Lobo, Ad J. M. Gillis, Annette van den Berg, Lambert C. J. Dorssers, Gazanfer Belge, Klaus‐Peter Dieckmann, Henk P. Roest, Luc J. W. van der Laan, Jourik A. Gietema, Robert J. Hamilton, Carmen Jerónimo, Rui Henrique, Daniela Salvatori, Leendert H. J. Looijenga
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12864-020-6546-8

Comparative transcriptome analysis uncovers regulatory roles of long non-coding RNAs involved in resistance to powdery mildew in melon
Cited by: 20
Author(s): Chao Gao, Jinyue Sun, Yushu Dong, Chongqi Wang, Shijun Xiao, Longfei Mo, Jiao ZiGao
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-021-98651-z

TNF induces glycolytic shift in fibroblast like synoviocytes via GLUT1 and HIF1A
Cited by: 20
Author(s): Kathrin Koedderitzsch, Ekaterina Zezina, Lingzi Li, Matthias Herrmann, Nadine Biesemann
Software Mentions: 1
Published: about 5 years ago

10.3390/cells10071832

The FibromiR miR-214-3p Is Upregulated in Duchenne Muscular Dystrophy and Promotes Differentiation of Human Fibro-Adipogenic Muscle Progenitors
Cited by: 3
Author(s): Nicole Arrighi, Claudine Moratal, Grégoire Savary, Julien Fassy, Nicolas Nottet, Nicolas Pons, Noémie Clement, Sandy Fellah, Romain Larrue, Virginie Magnone, Kévin Lebrigand, Nicolas Pottier, Claude J. Dechesne, Georges Vassaux, Christian Dani, Pascal Peraldi, Bernard Mari
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-018-5251-3

Genomic identification and functional analysis of essential genes in Caenorhabditis elegans
Cited by: 9
Author(s): Shicheng Yu, Chaoran Zheng, Fan Zhou, David L. Baillie, Ann M. Rose, Zixin Deng, Jeffrey Shih-Chieh Chu
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41419-020-03111-7

Targeting tumor cell-derived CCL2 as a strategy to overcome Bevacizumab resistance in ETV5+ colorectal cancer
Cited by: 24
Author(s): Haoran Feng, Kun Liu, Xiaonan Shen, Juyong Liang, Changgang Wang, Weihua Qiu, Xi Cheng, Ren Zhao
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41392-020-00269-6

Comparison of nonhuman primates identified the suitable model for COVID-19
Cited by: 173
Author(s): Shuaiyao Lu, Yuan Zhao, Yu Wu, Yun Yang, Jian Gao, Junbin Wang, Dexuan Kuang, Mengli Yang, Jing Yang, Chang–Jin Ma, Jingwen Xu, Xiangyang Qian, Haiyan Li, Shuaiyang Zhao, Jingmei Li, Haixuan Wang, Haiting Long, Jingxian Zhou, Fangyu Luo, Kan Ding, Daoju Wu, Yong Zhang, Yinliang Dong, Yuqin Liu, Yinqiu Zheng, Xiaochen Lin, Jiao Li, Huanying Zheng, Qing Dai, Qiangming Sun, Yunzhang Hu, Changwen Ke, Hongqi Liu, Xiaozhong Peng
Software Mentions: 1
Published: about 6 years ago

10.1038/s41419-021-03856-9

TRPM2 promotes pancreatic cancer by PKC/MAPK pathway
Cited by: 25
Author(s): Rui Lin, Xiao Bao, Hui Wang, Sibo Zhu, Zhongyan Liu, Quanning Chen, Kaixing Ai, Baomin Shi
Software Mentions: 1
Published: over 5 years ago

10.1038/s41419-020-03348-2

BTF3 confers oncogenic activity in prostate cancer through transcriptional upregulation of Replication Factor C
Cited by: 9
Author(s): Yuan Zhang, Xiang Gao, Jingyan Yi, Xiaolin Sang, Zhihong Dai, Tao Zhou, Min Wang, Limeng Shen, Yaxun Jia, Xie Daqing, Hai‐Ling Margaret Cheng, Zhiyu Liu, Pixu Liu
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-017-4114-7

Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription factor repertoire of the plant symbiotic fungus Laccaria bicolor
Cited by: 10
Author(s): Yohann Daguerre, Elisabetta Levati, Joske Ruytinx, Émilie Tisserant, Emmanuel Morin, Annegret Kohler, Barbara Montanini, Simone Ottonello, Annick Brun, Claire Veneault‐Fourrey, Francis Martin
Software Mentions: 1
Published: about 9 years ago

10.3390/cancers13143513

Expression of Retroelements in Cervical Cancer and Their Interplay with HPV Infection and Host Gene Expression
Cited by: 6
Author(s): Gislaine Curty, Albert N. Menezes, Ayslan Castro Brant, Miguel de Mulder Rougvie, Miguel Ângelo Martins Moreira, Marcelo A. Soares
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers12071811

Proliferative Classification of Intracranially Injected HER2-positive Breast Cancer Cell Lines
Cited by: 18
Author(s): Yoshihiro Kuroiwa, Jun Nakayama, Chihiro Adachi, Takafumi Inoue, Shinya Watanabe, Kentaro Semba
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers10090317

Transcriptome Signatures of Canine Mammary Gland Tumors and Its Comparison to Human Breast Cancers
Cited by: 18
Author(s): Kanghoon Lee, Hyoung-Min Park, Keun Hong Son, Teo Jeon Shin, Je‐Yoel Cho
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0229754

Methylation of SRD5A2 promoter predicts a better outcome for castration-resistant prostate cancer patients undergoing androgen deprivation therapy
Cited by: 5
Author(s): Zongwei Wang, Tuo Deng, Xingbo Long, Xueming Lin, Shulin Wu, Hongbo Wang, Rongbin Ge, Zhenwei Zhang, Chin‐Lee Wu, Mary‐Ellen Taplin, Aria F. Olumi
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-15-45

The transcriptome of the NZ endemic sea urchin Kina (Evechinus chloroticus)
Cited by: 23
Author(s): Gareth Benjamin Gillard, Daniel J. Garama, Chris M. Brown
Software Mentions: 1
Published: over 12 years ago

10.1186/s12864-019-6103-5

Complex and dynamic transcriptional changes allow the helminth Fasciola gigantica to adjust to its intermediate snail and definitive mammalian hosts
Cited by: 24
Author(s): Xiaoxuan Zhang, Krystyna Cwiklinski, Rui-Si Hu, Wei Zheng, Zhao-An Sheng, Fu-Kai Zhang, Hany M. Elsheikha, John P. Dalton, Xing‐Quan Zhu
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0188838

Virulence genes and subclone status as markers of experimental virulence in a murine sepsis model among Escherichia coli sequence type 131 clinical isolates from Spain
Cited by: 7
Author(s): Irene Merino, Stephen Porter, Brian Johnston, Connie Clabots, Evelyn Shaw, Juan Pablo Horcajada, Rafael Cantón, Patrícia Ruíz-Garbajosa, James R. Johnson
Software Mentions: 1
Published: almost 9 years ago

10.1186/s13287-020-01908-z

microRNA-375 released from extracellular vesicles of bone marrow mesenchymal stem cells exerts anti-oncogenic effects against cervical cancer
Cited by: 15
Author(s): Feng Ding, Jinhua Liu, Xiaofei Zhang
Software Mentions: 1
Published: almost 6 years ago

10.18632/oncotarget.26983

The heterogeneity and complexity of Cannabis extracts as antitumor agents
Cited by: 64
Author(s): Liran Baram, Ella Peled, Paula Berman, Ben Yellin, Elazar Besser, Maya Benami, Igal Louria-Hayon, Gil M. Lewitus, David Meiri
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0235268

Dynamic longitudinal behavior in animals exposed to chronic social defeat stress
Cited by: 10
Author(s): Marlon Wendelmuth, M. Willam, Hristo Todorov, Konstantin Radyushkin, Susanne Gerber, Susann Schweiger
Software Mentions: 1
Published: about 6 years ago

10.18632/oncotarget.27508

Roscovitine enhances all-trans retinoic acid (ATRA)-induced nuclear enrichment of an ensemble of activated signaling molecules and augments ATRA-induced myeloid cell differentiation
Cited by: 9
Author(s): Asif Rashid, Xin Duan, Feng Gao, Moon-Sik Yang, Andrew Yen
Software Mentions: 1
Published: over 6 years ago

10.3390/ani11071913

Preliminary Study: Proteomic Profiling Uncovers Potential Proteins for Biomonitoring Equine Melanocytic Neoplasm
Cited by: 4
Author(s): Parichart Tesena, Amornthep Kingkaw, Wanwipa Vongsangnak, Surakiet Pitikarn, Narumon Phaonakrop, Sittiruk Roytrakul, Attawit Kovitvadhi
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0223417

Effect of host genotype and Eimeria acervulina infection on the metabolome of meat-type chickens
Cited by: 10
Author(s): Samuel E. Aggrey, Marie C. Milfort, Alberta L. Fuller, Jianmin Yuan, Romdhane Rekaya
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0182426

Disruption in the cecal microbiota of chickens challenged with Clostridium perfringens and other factors was alleviated by Bacillus licheniformis supplementation
Cited by: 59
Author(s): Lin Yang, Shengyu Xu, Dong Zeng, Xueqin Ni, Mingmei Zhou, Yan Zeng, Hesong Wang, Yi Zhou, Hongxiang Zhu, Kangcheng Pan, Guangyao Li
Software Mentions: 1
Published: about 9 years ago

10.1186/s12864-020-6715-9

Genome-wide analysis of the citrus B3 superfamily and their association with somatic embryogenesis
Cited by: 10
Author(s): Zheng Liu, Xiao Xia Ge, Xiao Meng Wu, Qiang Xu, Ross G. Atkinson, Guo Wen
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0250075

Gut microbiota of endangered crested ibis: Establishment, diversity, and association with reproductive output
Cited by: 8
Author(s): Jian Ran, Qiu‐Hong Wan, Sheng‐Guo Fang
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0240847

Root- and foliar-applied silicon modifies C: N: P ratio and increases the nutritional efficiency of pre-sprouted sugarcane seedlings under water deficit
Cited by: 26
Author(s): Gelza Carliane Marques Teixeira, Renato de Mello Prado, Antônio Márcio Souza Rocha, Marisa de Cássia Píccolo
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0096552

Crude Oil Treatment Leads to Shift of Bacterial Communities in Soils from the Deep Active Layer and Upper Permafrost along the China-Russia Crude Oil Pipeline Route
Cited by: 81
Author(s): Shuai Yang, Wen Xi, Liang Zhao, Yulan Shi, Huijun Jin
Software Mentions: 1
Published: over 12 years ago

10.7150/thno.52843

CircUbe3a from M2 macrophage-derived small extracellular vesicles mediates myocardial fibrosis after acute myocardial infarction
Cited by: 49
Author(s): Yan Wang, Chaofu Li, Ranzun Zhao, Zhimei Qiu, Changyin Shen, Zhenglong Wang, Weiwei Liu, Wei Zhang, Junbo Ge, Bei Shi
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0194259

Serum microRNA profiles in athyroid patients on and off levothyroxine therapy
Cited by: 9
Author(s): Elske T. Massolt, Layal Chaker, Theo J. Visser, Ad J. M. Gillis, Lambert C. J. Dorssers, Carolien Beukhof, Boen L.R. Kam, Gaston J H Franssen, Giulia Brigante, Tessa M. van Ginhoven, W. Edward Visser, Leendert H. J. Looijenga, Robin P. Peeters
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.27943

The acylfulvene alkylating agent, LP-184, retains nanomolar potency in non-small cell lung cancer carrying otherwise therapy-refractory mutations
Cited by: 2
Author(s): Aditya Kulkarni, Joseph McDermott, Umesh Kathad, Rama Modali, Jaepyeong Cha, Panna Sharma, Kishor Bhatia
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0219220

Metabolomic profiles in yak mammary gland tissue during the lactation cycle
Cited by: 17
Author(s): Zhixiong Li, Mingfeng Jiang
Software Mentions: 1
Published: about 7 years ago

10.1186/s13018-020-01780-w

MiR-708 inhibits MC3T3-E1 cells against H2O2-induced apoptosis through targeting PTEN
Cited by: 11
Author(s): Wei Zhang, Shengyu Cui, Ye Hong, Xiao Feng Zhu, Wei Liu, Youjia Xu
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0213676

Carbohydrate intake attenuates post-exercise plasma levels of cytochrome P450-generated oxylipins
Cited by: 27
Author(s): David C. Nieman, Nicholas D. Gillitt, Guan-Yuan Chen, Qibin Zhang, Camila A. Sakaguchi, Ella H. Stephan
Software Mentions: 1
Published: over 7 years ago

10.1186/s13018-021-02392-8

Biomarkers mining for spinal cord injury based on integrated multi-transcriptome expression profile data
Cited by: 6
Author(s): Chongcheng Gong, Lin Liu, Yang Shen
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pgen.1006929

Comprehensive analysis of nucleocytoplasmic dynamics of mRNA in Drosophila cells
Cited by: 21
Author(s): Tao Chen, Bas van Steensel
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pgen.1004860

Enhanced Longevity by Ibuprofen, Conserved in Multiple Species, Occurs in Yeast through Inhibition of Tryptophan Import
Cited by: 77
Author(s): Chi He, Scott Tsuchiyama, Quynh T. Nguyen, Ekaterina Plyusnina, Samuel R. Terrill, Sarah Sahibzada, Bhumil Patel, Alena R. Faulkner, Mikhail Shaposhnikov, Ruilin Tian, Mitsuhiro Tsuchiya, Matt Kaeberlein, Alexey Moskalev, Brian K. Kennedy, Michael Polymenis
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pbio.2006571

Organic cation transporter 3 (Oct3) is a distinct catecholamines clearance route in adipocytes mediating the beiging of white adipose tissue
Cited by: 37
Author(s): Wenxin Song, Qi Luo, Yuping Zhang, Linkang Zhou, Ye Liu, Zhilong Ma, Jianming Guo, Yuedong Huang, Lili Cheng, Ziyi Meng, Zicheng Li, Bin Zhang, Siqi Li, Sook Wah Yee, Hao Fan, Peng Li, Kathleen M. Giacomini, Ligong Chen
Software Mentions: 1
Published: over 7 years ago

10.3390/plants8120615

Soil Mesofauna Respond to the Upward Expansion of Deyeuxia purpurea in the Alpine Tundra of the Changbai Mountains, China
Cited by: 2
Author(s): Tao Yan, Zhongqiang Wang, Chen Ma, Hongshi He, Jiawei Xu, Yinghua Jin, Haixia Wang, Xiaona Zheng
Software Mentions: 1
Published: almost 7 years ago

10.3390/plants9070855

Identification of the Volatile Compounds and Observation of the Glandular Trichomes in Opisthopappus taihangensis and Four Species of Chrysanthemum
Cited by: 11
Author(s): Yanhong Guo, Tengxun Zhang, Jian Zhong, Tingting Ba, Ting Xu, Qixiang Zhang, Ming Sun
Software Mentions: 1
Published: about 6 years ago

10.3390/plants9050586

Insights into the SAM Synthetase Gene Family and Its Roles in Tomato Seedlings under Abiotic Stresses and Hormone Treatments
Cited by: 39
Author(s): Parviz Heidari, Faezeeh Mazloomi, Thomas Nußbaumer, Gianni Barcaccia
Software Mentions: 1
Published: over 6 years ago

10.1038/s41398-020-00904-4

Tauopathy in the young autistic brain: novel biomarker and therapeutic target
Cited by: 49
Author(s): Iris Grigg, Yanina Ivashko-Pachima, Tom Aharon Hait, Vlasta Korenková, Olga Touloumi, Roza Lagoudaki, Anke Van Dijck, Zlatko Marušić, Mirna Aničić, Jurica Vuković, R. Frank Kooy, Nikolaos Grigoriadis, Illana Gozes
Software Mentions: 1
Published: about 6 years ago

10.1002/pld3.305

BHLH IRIDOID SYNTHESIS 3 is a member of a bHLH gene cluster regulating terpenoid indole alkaloid biosynthesis in Catharanthus roseus
Cited by: 18
Author(s): Sanjay K. Singh, Barunava Patra, Priyanka Paul, Yongliang Liu, Sitakanta Pattanaik, Ling Yuan
Software Mentions: 1
Published: almost 6 years ago

10.1111/pbi.13094

A single nucleotide mutation in<scp>GID</scp>1cdisrupts its interaction with<scp>DELLA</scp>1 and causes a GA‐insensitive dwarf phenotype in peach
Cited by: 47
Author(s): Jun Cheng, Mengmeng Zhang, Bin Tan, Yajun Jiang, Xianbo Zheng, Ye Xia, Zijing Guo, Tingting Xiong, Wei Wang, Jidong Li, Jiancan Feng
Software Mentions: 1
Published: over 7 years ago

10.3390/ph12010033

Characterisation of an Isogenic Model of Cisplatin Resistance in Oesophageal Adenocarcinoma Cells
Cited by: 9
Author(s): A Buckley, Becky A.S. Bibby, Margaret R. Dunne, Susan Kennedy, Maria Davern, Breandán N Kennedy, Stephen G. Maher, Jacintha O’Sullivan
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-018-4861-0

Mixed evolutionary origins of endogenous biomass-depolymerizing enzymes in animals
Cited by: 6
Author(s): Wai Hoong Chang, Alvina G. Lai
Software Mentions: 1
Published: over 8 years ago

10.7717/peerj.7544

Crucial lncRNAs associated with adipocyte differentiation from human adipose-derived stem cells based on co-expression and ceRNA network analyses
Cited by: 15
Author(s): Kana Chen, Shujie Xie, Wujun Jin
Software Mentions: 1
Published: about 7 years ago

10.3390/ani11051351

Dynamic Expression Profiles of Circular RNAs during Brown to White Adipose Tissue Transformation in Goats (Capra hircus)
Cited by: 7
Author(s): Xujia Zhang, Siyuan Zhan, Shi‐Zhong Yang, Tao Zhong, Jiazhong Guo, Jiaxue Cao, Yan Wang, Li Li, Hongping Zhang, Linjie Wang
Software Mentions: 1
Published: over 5 years ago

10.1186/s13018-021-02545-9

Vitamin D inhibits TNF-α induced apoptosis of human nucleus pulposus cells through regulation of NF-kB signaling pathway
Cited by: 11
Author(s): Cun Zhang, Tong Tong, Dechao Miao, Linfeng Wang
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.4030

Whole genome sequencing of Rhodotorula mucilaginosa isolated from the chewing stick (Distemonanthus benthamianus): insights into Rhodotorula phylogeny, mitogenome dynamics and carotenoid biosynthesis
Cited by: 19
Author(s): Han Ming Gan, Bolaji N. Thomas, Nicole T. Cavanaugh, Grace Morales, Ashley N Mayers, Michael A. Savka, André O. Hudson
Software Mentions: 1
Published: almost 9 years ago

10.7717/peerj.11496

Identification of potential gene signatures associated with osteosarcoma by integrated bioinformatics analysis
Cited by: 13
Author(s): Yutao Jia, Yang Liu, Zhihua Han, Rong Tian
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.4514

Assessing soil bacterial community and dynamics by integrated high-throughput absolute abundance quantification
Cited by: 57
Author(s): Jun Lou, Li Yang, Haizhen Wang, Laosheng Wu, Jianming Xu
Software Mentions: 1
Published: over 8 years ago

10.1128/mBio.02767-19

CD71 + Erythroid Cells Exacerbate HIV-1 Susceptibility, Mediate trans -Infection, and Harbor Infective Viral Particles
Cited by: 28
Author(s): Afshin Namdar, Garett Dunsmore, Shima Shahbaz, Petya Koleva, Lai Xu, Juan Jovel, Stan Houston, Shokrollah Elahi
Software Mentions: 1
Published: almost 7 years ago

10.1128/mBio.02657-19

Microbiomes Reduce Their Host’s Sensitivity to Interspecific Interactions
Cited by: 16
Author(s): Sara L. Jackrel, Kathryn C. Schmidt, Bradley J. Cardinale, Vincent J. Denef
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.11329

Genome-wide identification, classification, and expression analysis of the HSF gene family in pineapple (Ananas comosus)
Cited by: 7
Author(s): Lulu Wang, Qing Liu, Mengnan Chai, Huihuang Chen, Mohammad Aslam, Xiaoping Niu, Yuan Qin, Hanyang Cai
Software Mentions: 1
Published: over 5 years ago

10.1128/mBio.01325-20

Lateral Gene Transfer Drives Metabolic Flexibility in the Anaerobic Methane-Oxidizing Archaeal Family Methanoperedenaceae
Cited by: 48
Author(s): Andy O. Leu, Simon Jon McIlroy, Jun Ye, Donovan H. Parks, Victoria J. Orphan, Gene W. Tyson
Software Mentions: 1
Published: over 6 years ago

10.1128/mBio.00728-20

Pan-GWAS of Streptococcus agalactiae Highlights Lineage-Specific Genes Associated with Virulence and Niche Adaptation
Cited by: 41
Author(s): Andrea Gori, Odile B. Harrison, Ethwako Mlia, Yo Nishihara, Jia Mun Chan, Jacquline Msefula, Macpherson Mallewa, Queen Dube, Todd D. Swarthout, Angela H. Nobbs, Martin Maiden, Neil French, Robert S. Heyderman
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.6455

Amorphous silica nanoparticles induce tumorigenesis via regulating ATP5H/SOD1-related oxidative stress, oxidative phosphorylation and EIF4G2/PABPC1-associated translational initiation
Cited by: 5
Author(s): Dongli Xie, Yang Zhou, Xiaogang Luo
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-018-5078-y

Bacterial endosymbiont Cardinium cSfur genome sequence provides insights for understanding the symbiotic relationship in Sogatella furcifera host
Cited by: 29
Author(s): Zhen Zeng, Yating Fu, Dongyang Guo, Yuxuan Wu, Olugbenga Emmanuel Ajayi, Qingfa Wu
Software Mentions: 1
Published: about 8 years ago

10.3390/pathogens3010211

Genome Sequencing of Xanthomonas vasicola Pathovar vasculorum Reveals Variation in Plasmids and Genes Encoding Lipopolysaccharide Synthesis, Type-IV Pilus and Type-III Secretion Effectors
Cited by: 23
Author(s): Arthur Wasukira, Max Coulter, Noorah Al-Sowayeh, Richard Thwaites, Konrad Paszkiewicz, Jerome Kubiriba, J. J. Smith, Murray Grant, David J. Studholme
Software Mentions: 1
Published: over 12 years ago

Projects: cran: pheatmap

Science Score: 75/100

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Papers Mentioning pheatmap 2,572