cran: pheatmap | Projects | Ecosyste.ms: Papers

10.1186/s12935-020-01407-4

Screening and verification of long noncoding RNA promoter methylation sites in hepatocellular carcinoma
Cited by: 6
Author(s): Zhuo Lin, Xiaofeng Ni, Shengjie Dai, Hao Chen, Jianhui Chen, Boda Wu, Jian‐Yang Ao, Ke–Qing Shi, Hongwei Sun
Software Mentions: 1
Published: about 6 years ago

10.18632/oncotarget.18802

Dexamethasone affects cell growth/apoptosis/chemosensitivity of colon cancer via glucocorticoid receptor α/NF-κB
Cited by: 23
Author(s): Jia He, Jinming Zhou, Weiwen Yang, Qi Zhou, Xi Liu, Xiaowu Pang, Jianjun Li, Feng Pan, Houjie Liang
Software Mentions: 1
Published: about 9 years ago

10.1016/j.dib.2020.105179

Proteome data to explore the axolotl limb regeneration capacity at neotenic and metamorphic stages
Cited by: 2
Author(s): Turan Demircan, Mustafa Sibai, Ebru Altuntaş
Software Mentions: 1
Published: over 6 years ago

10.1016/j.dib.2020.105523

Data analysis of PD-1 antibody in the treatment of melanoma patients
Cited by: 2
Author(s): Ting Li, Chao Zhang, Gang Zhao, Xinwei Zhang, Mengze Hao, Shafat Hassan, Min Zhang, Hong Zheng, Da Yang, Liang Liu, Farideh Mehraein-Ghomi, Xu Bai, Kexin Chen, Wei Zhang, Jilong Yang
Software Mentions: 1
Published: about 6 years ago

10.1155/2021/2649123

Identification of a Transcription Factor Signature That Can Predict Breast Cancer Survival
Cited by: 4
Author(s): Chi Fan, Jianshi Du, Liu Ning
Software Mentions: 1
Published: over 5 years ago

10.3390/jcm10050998

High Comorbidity Burden in Patients with SLE: Data from the Community-Based Lupus Registry of Crete
Cited by: 21
Author(s): Irini Gergianaki, Panagiotis Garantziotis, Christina Adamichou, Ioannis Saridakis, G Spyrou, Prodromos Sidiropoulos, George Βertsias
Software Mentions: 1
Published: over 5 years ago

10.1186/s12880-021-00610-7

Preoperative ultrasound radiomics analysis for expression of multiple molecular biomarkers in mass type of breast ductal carcinoma in situ
Cited by: 12
Author(s): Linyong Wu, Yujia Zhao, Peng Lin, Hui Qin, Yichen Liu, Da Wan, Xin Li, Yun He, Hong Yang
Software Mentions: 1
Published: over 5 years ago

10.1002/fsn3.1010

Effect of differentLactobacillusspecies on volatile and nonvolatile flavor compounds in juices fermentation
Cited by: 37
Author(s): Shumao Cui, Nan Zhao, Wenwei Liu, Fang Zhao, Zheng SongYou, Weijun Wang, Wei Chen
Software Mentions: 1
Published: about 7 years ago

10.1186/s12920-021-01092-w

Identification of immunization-related new prognostic biomarkers for papillary renal cell carcinoma by integrated bioinformatics analysis
Cited by: 2
Author(s): Ping Wu, T. Xiang, Jing Wang, Run Lv, Shaoxin Ma, Limei Yuan, Guangzhen Wu, Xiangyu Che
Software Mentions: 1
Published: almost 5 years ago

10.1186/s40662-021-00248-0

Intravitreal brimonidine inhibits form-deprivation myopia in guinea pigs
Cited by: 5
Author(s): Yifang Yang, Jang‐Yen Wu, Dongde Wu, Qi Wei, Tan Zhong, Jun Yang, Xiaowei Yang, Mei-zhen Zeng, Xingwu Zhong
Software Mentions: 1
Published: about 5 years ago

10.1093/jxb/ery335

bHLH92from sheepgrass acts as a negative regulator of anthocyanin/proanthocyandin accumulation and influences seed dormancy
Cited by: 39
Author(s): Pincang Zhao, Xiaoxia Li, Junjie Jia, Ye Yuan, Shuangyan Chen, Dongmei Qi, Long Cheng, Gongshe Liu
Software Mentions: 1
Published: almost 8 years ago

10.3389/fimmu.2020.579776

CD4+CD8+ T-Lymphocytes in Xenogeneic and Human Graft-versus-Host Disease
Cited by: 7
Author(s): Kutaiba Alhaj Hussen, David Michonneau, Vincent Biajoux, Seydou Keita, Laetitia Dubouchet, Elisabeth Nelson, Niclas Setterblad, Hélène Le Buanec, Jean‐David Bouaziz, Fabien Guimiot, Gérard Socié, Bruno Canque
Software Mentions: 1
Published: over 5 years ago

10.1002/cti2.1105

Prominent immune signatures of T cells are specifically associated with indolent B‐cell lymphoproliferative disorders and predict prognosis
Cited by: 3
Author(s): Shuhua Yi, Yu Zhang, Wei Xiong, Weiwei Chen, Zhaohua Hou, Yang Yang, Yuting Yan, Yunbo Wei, Rui Cui, Huijun Wang, Zhen Yu, Heng Li, Zengjun Li, Wei Liu, Rui Lv, Tingyu Wang, Kun Ru, Dehui Zou, Minglei Shu, Lugui Qiu, Di Yu
Software Mentions: 1
Published: over 6 years ago

10.18632/aging.102721

Targeting of miR-96-5p by catalpol ameliorates oxidative stress and hepatic steatosis in LDLr-/- mice via p66shc/cytochrome C cascade
Cited by: 26
Author(s): Yukun Zhang, Changyuan Wang, Jiawei Lu, Yue Jin, Canyao Xu, Qiang Meng, Qi Liu, Deshi Dong, Xiaodong Ma, Kexin Liu, Huijun Sun
Software Mentions: 1
Published: over 6 years ago

10.1186/s13020-020-00354-6

Integrated metabolomic and transcriptomic profiling reveals the tissue-specific flavonoid compositions and their biosynthesis pathways in Ziziphora bungeana
Cited by: 9
Author(s): Jiang He, Wei‐Jun Yang, Bo Cheng, Lina Ma, Dilinuer Tursunjiang, Zenghui Ding, Yong Li, Zhaofeng Wang, Yimian Ma, Li Guan
Software Mentions: 1
Published: about 6 years ago

10.1093/jxb/eraa347

Developmentally controlled changes during Arabidopsis leaf development indicate causes for loss of stress tolerance with age
Cited by: 13
Author(s): Aakansha Kanojia, Saurabh Gupta, Maria Benina, Alisdair R. Fernie, Bernd Mueller‐Roeber, Tsanko Gechev, Paul P. Dijkwel
Software Mentions: 1
Published: almost 6 years ago

10.3390/cells8121637

Identification and Validation Model for Informative Liquid Biopsy-Based microRNA Biomarkers: Insights from Germ Cell Tumor In Vitro, In Vivo and Patient-Derived Data
Cited by: 65
Author(s): João Lobo, Ad J. M. Gillis, Annette van den Berg, Lambert C. J. Dorssers, Gazanfer Belge, Klaus‐Peter Dieckmann, Henk P. Roest, Luc J. W. van der Laan, Jourik A. Gietema, Robert J. Hamilton, Carmen Jerónimo, Rui Henrique, Daniela Salvatori, Leendert H. J. Looijenga
Software Mentions: 1
Published: over 6 years ago

10.3389/fnmol.2021.620593

Severe Spinal Cord Injury in Rats Induces Chronic Changes in the Spinal Cord and Cerebral Cortex Metabolism, Adjusted by Thiamine That Improves Locomotor Performance
Cited by: 14
Author(s): Alexandra Boyko, Polina Tsepkova, Vasily A. Aleshin, Artem V. Artiukhov, Garik Mkrtchyan, Alexander L. Ksenofontov, L. A. Baratova, S. I. Ryabov, А. В. Граф, Victoria I. Bunik
Software Mentions: 1
Published: over 5 years ago

10.1093/jxb/erab029

Lycopene β-cyclase expression influences plant physiology, development, and metabolism in tobacco plants
Cited by: 19
Author(s): Stella Kössler, Tegan Armarego-Marriott, Danuše Tarkowská, Veronika Turečková, Shreya Agrawal, Jianing Mi, Leonardo Perez de Souza, Mark Aurel Schöttler, Anne Schadach, Andreas Fröhlich, Ralph Bock, Salim Al‐Babili, Stephanie Ruf, Arun Sampathkumar, Juan C. Moreno
Software Mentions: 1
Published: over 5 years ago

10.3390/cells10071832

The FibromiR miR-214-3p Is Upregulated in Duchenne Muscular Dystrophy and Promotes Differentiation of Human Fibro-Adipogenic Muscle Progenitors
Cited by: 3
Author(s): Nicole Arrighi, Claudine Moratal, Grégoire Savary, Julien Fassy, Nicolas Nottet, Nicolas Pons, Noémie Clement, Sandy Fellah, Romain Larrue, Virginie Magnone, Kévin Lebrigand, Nicolas Pottier, Claude J. Dechesne, Georges Vassaux, Christian Dani, Pascal Peraldi, Bernard Mari
Software Mentions: 1
Published: about 5 years ago

10.1186/s13287-020-01908-z

microRNA-375 released from extracellular vesicles of bone marrow mesenchymal stem cells exerts anti-oncogenic effects against cervical cancer
Cited by: 15
Author(s): Feng Ding, Jinhua Liu, Xiaofei Zhang
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12935-020-01659-0

Exosomes from tamoxifen-resistant breast cancer cells transmit drug resistance partly by delivering miR-9-5p
Cited by: 27
Author(s): Jianhui Liu, Shao‐Liang Zhu, Wei Tang, Qinghua Huang, Mei Yan, Huawei Yang
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.628838

Assessment of the Distribution and Safety of Tetragenococcus muriaticus for Potential Application in the Preparation of Chinese Grasshopper Sub Shrimp Paste
Cited by: 8
Author(s): Xue Sang, Xinxiu Ma, Yanan Zhang, Hongshun Hao, Jingran Bi, Gongliang Zhang, Hongman Hou
Software Mentions: 1
Published: over 5 years ago

10.3389/fnins.2020.00656

Non-photoreceptor Expression of Tulp1 May Contribute to Extensive Retinal Degeneration in Tulp1-/- Mice
Cited by: 10
Author(s): Arpad Palfi, Adlet Yesmambetov, Pete Humphries, Karsten Hokamp, G. Jane Farrar
Software Mentions: 1
Published: about 6 years ago

10.1186/s12935-020-01426-1

Identification of prognosis-related genes and construction of multi-regulatory networks in pancreatic cancer microenvironment by bioinformatics analysis
Cited by: 4
Author(s): Tong Li, Qiaofei Liu, Ronghua Zhang, Quan Liao, Yupei Zhao
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2021.653085

Kinetics of the Cellular and Transcriptomic Response to Eimeria maxima in Relatively Resistant and Susceptible Chicken Lines
Cited by: 12
Author(s): Abi Bremner, Sung-Won Kim, Katrina M. Morris, Matthew J. Nolan, Dominika Borowska, Wu Z, Fiona M. Tomley, Damer P. Blake, Rachel Hawken, Pete Kaiser, Lonneke Vervelde
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.ppat.1008341

Identification of amitriptyline HCl, flavin adenine dinucleotide, azacitidine and calcitriol as repurposing drugs for influenza A H5N1 virus-induced lung injury
Cited by: 61
Author(s): Fengming Huang, Cong Zhang, Qiang Liu, Yan Zhao, Yuqing Zhang, Yuhao Qin, Xiao Li, Chang Li, Cong‐Zhao Zhou, Ningyi Jin, Chengyu Jiang
Software Mentions: 1
Published: over 6 years ago

10.3389/fnins.2019.00909

Linear Registration of Brain MRI Using Knowledge-Based Multiple Intermediator Libraries
Cited by: 9
Author(s): Mengjie Zhang, Yanqiu Feng, Wufan Chen, Xin Li, Andréia V. Faria, Qianjin Feng, Susumu Mori
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12935-021-02056-x

SHP2 inhibition enhances the anticancer effect of Osimertinib in EGFR T790M mutant lung adenocarcinoma by blocking CXCL8 loop mediated stemness
Cited by: 8
Author(s): Leiming Xia, Fan Yang, Xiao‐Qin Wu, Suzhi Li, Kan Chen, Hong Zheng, Siying Wang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41419-020-03111-7

Targeting tumor cell-derived CCL2 as a strategy to overcome Bevacizumab resistance in ETV5+ colorectal cancer
Cited by: 24
Author(s): Haoran Feng, Kun Liu, Xiaonan Shen, Juyong Liang, Changgang Wang, Weihua Qiu, Xi Cheng, Ren Zhao
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41419-021-03856-9

TRPM2 promotes pancreatic cancer by PKC/MAPK pathway
Cited by: 25
Author(s): Rui Lin, Xiao Bao, Hui Wang, Sibo Zhu, Zhongyan Liu, Quanning Chen, Kaixing Ai, Baomin Shi
Software Mentions: 1
Published: about 5 years ago

10.3390/ani11071913

Preliminary Study: Proteomic Profiling Uncovers Potential Proteins for Biomonitoring Equine Melanocytic Neoplasm
Cited by: 4
Author(s): Parichart Tesena, Amornthep Kingkaw, Wanwipa Vongsangnak, Surakiet Pitikarn, Narumon Phaonakrop, Sittiruk Roytrakul, Attawit Kovitvadhi
Software Mentions: 1
Published: about 5 years ago

10.18632/oncotarget.22318

Identification of a three miRNA signature as a novel potential prognostic biomarker in patients with bladder cancer
Cited by: 13
Author(s): Fei Peng, Hui Li, Hailang Xiao, Ling Li, Yan Li, Yi Wu
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2017.01817

Rapid Gene Turnover as a Significant Source of Genetic Variation in a Recently Seeded Population of a Healthcare-Associated Pathogen
Cited by: 39
Author(s): Lucía Graña-Miraglia, Luis Lozano, Consuelo Velázquez, Patricia Volkow-Fernández, Ángeles Pérez-Oseguera, Miguel A. Cevallos, Santiago Castillo-Ramírez
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijms21165721

Induction of Glucoraphasatin Biosynthesis Genes by MYB29 in Radish (Raphanus sativus L.) Roots
Cited by: 6
Author(s): Ji-Nam Kang, So Youn Won, Mi-Suk Seo, Jeongyeo Lee, Si Myung Lee, Soo-Jin Kwon, Jung Sun Kim
Software Mentions: 1
Published: about 6 years ago

10.3389/fonc.2020.00326

Gastric Cancer Cell-Derived Exosomal microRNA-23a Promotes Angiogenesis by Targeting PTEN
Cited by: 44
Author(s): Jie Du, Yuan Liu, Ji Li, Jinming Zhao, Xu‐Yong Lin
Software Mentions: 1
Published: over 6 years ago

10.1186/s12967-020-02572-w

PGM5-AS1 impairs miR-587-mediated GDF10 inhibition and abrogates progression of prostate cancer
Cited by: 18
Author(s): Lei Du, Yongli Gao
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.652758

Response of Root-Associated Bacterial Communities to Different Degrees of Soft Rot Damage in Amorphophallus konjac Under a Robinia pseudoacacia Plantation
Cited by: 3
Author(s): Fei He
Software Mentions: 1
Published: about 5 years ago

10.1186/s12920-020-00823-9

Functional genomics of AP-2α and AP-2γ in cancers: in silico study
Cited by: 7
Author(s): Damian Kołat, Żaneta Kałuzińska, Magdalena Orzechowska, Andrzej K. Bednarek, Elżbieta Płuciennik
Software Mentions: 1
Published: over 5 years ago

10.3389/fmed.2020.00538

Self-Balance of Intestinal Flora in Spouses of Patients With Rheumatoid Arthritis
Cited by: 5
Author(s): Zhihui Liu, Yongwei Wu, Yubin Luo, Shixiong Wei, Chenyang Lu, Yi Zhou, Jing Wang, T. Miao, Hui Lin, Yi Zhao, Qi Liu, Yi Liu
Software Mentions: 1
Published: almost 6 years ago

10.1007/s10549-020-05763-7

Loss of progesterone receptor is associated with distinct tyrosine kinase profiles in breast cancer
Cited by: 10
Author(s): Andliena Tahiri, Xavier Tekpli, Somisetty V. Satheesh, Rik DeWijn, Torben Lüders, Ida Rashida Khan Bukholm, Antoni Hurtado, Jürgen Geisler, Vessela N. Kristensen
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms22052229

Genome-Wide Identification and Analysis of the MYB Transcription Factor Gene Family in Chili Pepper (Capsicum spp.)
Cited by: 38
Author(s): Magda Lisette Arce-Rodríguez, Octavio Martínez, Neftalí Ochoa-Alejo
Software Mentions: 1
Published: over 5 years ago

10.1038/s41419-020-03348-2

BTF3 confers oncogenic activity in prostate cancer through transcriptional upregulation of Replication Factor C
Cited by: 9
Author(s): Yuan Zhang, Xiang Gao, Jingyan Yi, Xiaolin Sang, Zhihong Dai, Tao Zhou, Min Wang, Limeng Shen, Yaxun Jia, Xie Daqing, Hai‐Ling Margaret Cheng, Zhiyu Liu, Pixu Liu
Software Mentions: 1
Published: over 5 years ago

10.1590/1414-431X2021e11592

A novel lncRNA-mRNA-miRNA signature predicts recurrence and disease-free survival in cervical cancer
Cited by: 6
Author(s): Mengxiong Li, Xingui Tian, Hongling Guo, Xiaoyu Xu, Yun Liu, Xiulan Hao, Hui Fang
Software Mentions: 1
Published: over 5 years ago

10.3389/fonc.2021.694594

Anti-Tumor Effects of BDH1 in Acute Myeloid Leukemia
Cited by: 5
Author(s): Fei Han, Huanhuan Zhao, Jun Lü, Weina Yun, Lingling Yang, Yude Lou, Dan Su, Xin Chen, Shixuan Zhang, Hanwei Jin, Xiang Li, Jie Sun, He Huang, Qishan Wang, Xi Jiang
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2021.642948

Cancer-Preventive Role of Bone Marrow-Derived Mesenchymal Stem Cells on Colitis-Associated Colorectal Cancer: Roles of Gut Microbiota Involved
Cited by: 22
Author(s): Ruohang He, Chaoqun Han, Ying Liu, Wei Qian, Xiaohua Hou
Software Mentions: 1
Published: about 5 years ago

10.1590/1414-431X20164897

Analyzing gene expression profiles in dilated cardiomyopathy via bioinformatics methods
Cited by: 3
Author(s): Liming Wang, Li Zhu, Rumei Luan, L. Wang, Jian Fu, X. Wang, Li Sui
Software Mentions: 1
Published: over 10 years ago

10.1186/s12864-020-6702-1

Genome wide screening and comparative genome analysis for Meta-QTLs, ortho-MQTLs and candidate genes controlling yield and yield-related traits in rice
Cited by: 39
Author(s): Bahman Khahani, Elahe Tavakol, Vahid Shariati, Fabio Fornara
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers13143513

Expression of Retroelements in Cervical Cancer and Their Interplay with HPV Infection and Host Gene Expression
Cited by: 6
Author(s): Gislaine Curty, Albert N. Menezes, Ayslan Castro Brant, Miguel de Mulder Rougvie, Miguel Ângelo Martins Moreira, Marcelo A. Soares
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers12071811

Proliferative Classification of Intracranially Injected HER2-positive Breast Cancer Cell Lines
Cited by: 18
Author(s): Yoshihiro Kuroiwa, Jun Nakayama, Chihiro Adachi, Takafumi Inoue, Shinya Watanabe, Kentaro Semba
Software Mentions: 1
Published: about 6 years ago

10.3390/plants8120615

Soil Mesofauna Respond to the Upward Expansion of Deyeuxia purpurea in the Alpine Tundra of the Changbai Mountains, China
Cited by: 2
Author(s): Tao Yan, Zhongqiang Wang, Chen Ma, Hongshi He, Jiawei Xu, Yinghua Jin, Haixia Wang, Xiaona Zheng
Software Mentions: 1
Published: over 6 years ago

10.1007/s13238-020-00805-8

Roles of Tet2 in meiosis, fertility and reproductive aging
Cited by: 9
Author(s): Huasong Wang, Linlin Liu, Mo Gou, Guian Huang, Chenglei Tian, Jiao Yang, Haiying Wang, Qin Xu, Guoliang Xu
Software Mentions: 1
Published: over 5 years ago

10.3390/plants9070855

Identification of the Volatile Compounds and Observation of the Glandular Trichomes in Opisthopappus taihangensis and Four Species of Chrysanthemum
Cited by: 11
Author(s): Yanhong Guo, Tengxun Zhang, Jian Zhong, Tingting Ba, Ting Xu, Qixiang Zhang, Ming Sun
Software Mentions: 1
Published: about 6 years ago

10.3390/plants9050586

Insights into the SAM Synthetase Gene Family and Its Roles in Tomato Seedlings under Abiotic Stresses and Hormone Treatments
Cited by: 39
Author(s): Parviz Heidari, Faezeeh Mazloomi, Thomas Nußbaumer, Gianni Barcaccia
Software Mentions: 1
Published: over 6 years ago

10.7150/thno.52843

CircUbe3a from M2 macrophage-derived small extracellular vesicles mediates myocardial fibrosis after acute myocardial infarction
Cited by: 49
Author(s): Yan Wang, Chaofu Li, Ranzun Zhao, Zhimei Qiu, Changyin Shen, Zhenglong Wang, Weiwei Liu, Wei Zhang, Junbo Ge, Bei Shi
Software Mentions: 1
Published: over 5 years ago

10.3389/fonc.2021.647236

Autophagy-Related Long Non-coding RNA Is a Prognostic Indicator for Bladder Cancer
Cited by: 30
Author(s): Jiaming Wan, Cheng Guo, Hongpeng Fang, Zhongye Xu, Yongwei Hu, Yun Luo
Software Mentions: 1
Published: over 5 years ago

10.1002/pld3.305

BHLH IRIDOID SYNTHESIS 3 is a member of a bHLH gene cluster regulating terpenoid indole alkaloid biosynthesis in Catharanthus roseus
Cited by: 18
Author(s): Sanjay K. Singh, Barunava Patra, Priyanka Paul, Yongliang Liu, Sitakanta Pattanaik, Ling Yuan
Software Mentions: 1
Published: over 5 years ago

10.1098/rsos.191937

Construction and forensic application of 20 highly polymorphic microhaplotypes
Cited by: 12
Author(s): Aliye Kureshi, Jienan Li, Dan Wen, Shule Sun, Zedeng Yang, Lagabaiyila Zha
Software Mentions: 1
Published: over 6 years ago

10.3390/ani11051351

Dynamic Expression Profiles of Circular RNAs during Brown to White Adipose Tissue Transformation in Goats (Capra hircus)
Cited by: 7
Author(s): Xujia Zhang, Siyuan Zhan, Shi‐Zhong Yang, Tao Zhong, Jiazhong Guo, Jiaxue Cao, Yan Wang, Li Li, Hongping Zhang, Linjie Wang
Software Mentions: 1
Published: over 5 years ago

10.1111/pbi.13094

A single nucleotide mutation in<scp>GID</scp>1cdisrupts its interaction with<scp>DELLA</scp>1 and causes a GA‐insensitive dwarf phenotype in peach
Cited by: 47
Author(s): Jun Cheng, Mengmeng Zhang, Bin Tan, Yajun Jiang, Xianbo Zheng, Ye Xia, Zijing Guo, Tingting Xiong, Wei Wang, Jidong Li, Jiancan Feng
Software Mentions: 1
Published: over 7 years ago

10.1148/rycan.2020190079

Decoding and Systematization of Medical Imaging Features of Multiple Human Malignancies
Cited by: 0
Author(s): Lu Wang, Zhaoyu Liu, Jing Xie, Yuheng Chen, Xiaoqi Zhao, Zifan You, Mingshu Yang, Wei Qian, Jie Tian, Kristen W. Yeom, Jiangdian Song
Software Mentions: 1
Published: almost 6 years ago

10.3389/fonc.2019.01578

Identification of a Two-Gene (PML-EPB41) Signature With Independent Prognostic Value in Osteosarcoma
Cited by: 7
Author(s): Shengye Liu, Jiamei Liu, Xuechen Yu, Tao Shen, Qin Fu
Software Mentions: 1
Published: over 6 years ago

10.3389/fonc.2021.640910

Molecular and Clinical Characterization of UBE2S in Glioma as a Biomarker for Poor Prognosis and Resistance to Chemo-Radiotherapy
Cited by: 6
Author(s): Li Hu, Xingbo Cheng, Zev A. Binder, Zhibin Han, Yibo Yin, Donald M. O’Rourke, Sida Wang, Yumeng Feng, Changjiang Weng, Anhua Wu, Zhiguo Lin
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-019-5975-8

Comparative genomic analysis revealed great plasticity and environmental adaptation of the genomes of Enterococcus faecium
Cited by: 36
Author(s): Zhi-Ping Zhong, Lai‐Yu Kwok, Qiangchuan Hou, Yaru Sun, Weicheng Li, Heping Zhang, Zhihong Sun
Software Mentions: 1
Published: about 7 years ago

10.3389/fcell.2021.686395

Global Screening of LUBAC and OTULIN Interacting Proteins by Human Proteome Microarray
Cited by: 0
Author(s): Lijie Zhou, Yingwei Ge, Yesheng Fu, Bo Wu, Yong Zhang, Lei Li, Chun-Ping Chu, Siying Wang, Lingqiang Zhang
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.01184

Novel Yersinia enterocolitica Prophages and a Comparative Analysis of Genomic Diversity
Cited by: 4
Author(s): Junrong Liang, Zengqiang Kou, Shuai Qin, Yuhuang Chen, Zhenpeng Li, Chuchu Li, Ran Duan, Huijing Hao, Tao Zha, Wenpeng Gu, Yuanming Huang, Meng Xiao, Huaiqi Jing, Xin Wang
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2021.708009

A Comparative Transcriptome Between Anti-drug Sensitive and Resistant Candida auris in China
Cited by: 3
Author(s): Wenkai Zhou, Xiuzhen Li, Yiqing Lin, Wei Yan, Shuling Jiang, Xiaotian Huang, Xinglong Yang, Dan Qiao, Na Li
Software Mentions: 1
Published: about 5 years ago

10.3390/ph12010033

Characterisation of an Isogenic Model of Cisplatin Resistance in Oesophageal Adenocarcinoma Cells
Cited by: 9
Author(s): A Buckley, Becky A.S. Bibby, Margaret R. Dunne, Susan Kennedy, Maria Davern, Breandán N Kennedy, Stephen G. Maher, Jacintha O’Sullivan
Software Mentions: 1
Published: over 7 years ago

10.3389/fcimb.2015.00055

Exploring salivary microbiota in AIDS patients with different periodontal statuses using 454 GS-FLX Titanium pyrosequencing
Cited by: 19
Author(s): Fang Zhang, Shenghua He, Jie-Qi Jin, Guangyan Dong, Hong-Kun Wu
Software Mentions: 1
Published: about 11 years ago

10.3389/fmicb.2017.00966

Different Types of Dietary Fibers Trigger Specific Alterations in Composition and Predicted Functions of Colonic Bacterial Communities in BALB/c Mice
Cited by: 44
Author(s): Yuheng Luo, Ling Li Zhang, Hua Li, Hauke Smidt, André Denis G. Wright, Keying Zhang, Xuemei Ding, Qiufeng Zeng, Shiping Bai, Jianping Wang, Jian Li, Ping Zheng, Gang Tian, Jingyi Cai, Shuai Chen
Software Mentions: 1
Published: about 9 years ago

10.1186/s13068-019-1511-y

Quantitative proteomic analysis reveals the ethanologenic metabolism regulation of Ethanoligenens harbinense by exogenous ethanol addition
Cited by: 13
Author(s): Huahua Li, Xiaoxue Mei, Bingfeng Liu, Guo-Jun Xie, Nanqi Ren, Defeng Xing
Software Mentions: 1
Published: about 7 years ago

10.1038/s12276-021-00661-4

Pituitary P62 deficiency leads to female infertility by impairing luteinizing hormone production
Cited by: 9
Author(s): Xing Li, Ling Zhou, Guiliang Peng, Mingyu Liao, Linlin Zhang, Hua Hu, Линг Лонг, Xuefeng Tang, Hua Qu, Jianghua Shao, Cong-Yi Wang, Min Long
Software Mentions: 1
Published: about 5 years ago

10.1002/bit.27836

Assessing the influence of perfusion on cardiac microtissue maturation: A heart‐on‐chip platform embedding peristaltic pump capabilities
Cited by: 10
Author(s): Daniela Cruz-Moreira, Roberta Visone, Francisco Vasques‐Nóvoa, António S. Barros, Adelino Leite‐Moreira, Alberto Redaelli, Matteo Moretti
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.7544

Crucial lncRNAs associated with adipocyte differentiation from human adipose-derived stem cells based on co-expression and ceRNA network analyses
Cited by: 15
Author(s): Kana Chen, Shujie Xie, Wujun Jin
Software Mentions: 1
Published: almost 7 years ago

10.3389/fcimb.2020.576185

The in vitro Effects of the Probiotic Strain, Lactobacillus casei ZX633 on Gut Microbiota Composition in Infants With Diarrhea
Cited by: 8
Author(s): Xing Wang, Miao Zhang, Weidong Wang, Haoxin Lv, Hua Zhong, Yuan Liu, Zhongfang Tan
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2020.01533

A Systems-Wide Analysis of Proteolytic and Lipolytic Pathways Uncovers The Flavor-Forming Potential of The Gram-Positive Bacterium Macrococcus caseolyticus subsp. caseolyticus
Cited by: 19
Author(s): Shahneela Mazhar, Kieran N. Kilcawley, Colin Hill, Olivia McAuliffe
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21239059

Exercise and the Cisd2 Prolongevity Gene: Two Promising Strategies to Delay the Aging of Skeletal Muscle
Cited by: 10
Author(s): Yuan Teng, Jing Ya Wang, Y. H. Hui, Ting Fen Tsai
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.4030

Whole genome sequencing of Rhodotorula mucilaginosa isolated from the chewing stick (Distemonanthus benthamianus): insights into Rhodotorula phylogeny, mitogenome dynamics and carotenoid biosynthesis
Cited by: 19
Author(s): Han Ming Gan, Bolaji N. Thomas, Nicole T. Cavanaugh, Grace Morales, Ashley N Mayers, Michael A. Savka, André O. Hudson
Software Mentions: 1
Published: almost 9 years ago

10.1042/BSR20203398

An miRNA signature associated with tumor mutation burden in endometrial cancer
Cited by: 5
Author(s): Hongyu Zhou, Lihua Chen, Mei Qin, Yajie Lei, Tianjiao Li, Haoran Li, Xi Cheng
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms22179527

Nitrate Regulates Maize Root Transcriptome through Nitric Oxide Dependent and Independent Mechanisms
Cited by: 1
Author(s): Laura Ravazzolo, Sara Trevisan, Silvia Iori, Cristian Forestan, Mario Malagoli, Silvia Quaggiotti
Software Mentions: 1
Published: almost 5 years ago

10.7717/peerj.11496

Identification of potential gene signatures associated with osteosarcoma by integrated bioinformatics analysis
Cited by: 13
Author(s): Yutao Jia, Yang Liu, Zhihua Han, Rong Tian
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.4514

Assessing soil bacterial community and dynamics by integrated high-throughput absolute abundance quantification
Cited by: 57
Author(s): Jun Lou, Li Yang, Haizhen Wang, Laosheng Wu, Jianming Xu
Software Mentions: 1
Published: over 8 years ago

10.1186/s12885-019-6068-4

Glutamate metabotropic receptor 4 (GRM4) inhibits cell proliferation, migration and invasion in breast cancer and is regulated by miR-328-3p and miR-370-3p
Cited by: 32
Author(s): Bin Xiao, Daxiang Chen, Quan Zhou, Jianfeng Hang, Weiyun Zhang, Zhenzhan Kuang, Zhigang Sun, Linhai Li
Software Mentions: 1
Published: almost 7 years ago

10.1186/1471-2164-15-580

Dual transcriptomics of virus-host interactions: comparing two Pacific oyster families presenting contrasted susceptibility to ostreid herpesvirus 1
Cited by: 82
Author(s): Amélie Segarra, Florian Mauduit, Nicole Faury, Suzanne Trancart, Lionel Dégremont, Delphine Tourbiez, Philippe Haffner, Valérie Barbosa-Solomieu, Jean-François Pépin, Marie‐Agnès Travers, Tristan Renault
Software Mentions: 1
Published: about 12 years ago

10.7717/peerj.11329

Genome-wide identification, classification, and expression analysis of the HSF gene family in pineapple (Ananas comosus)
Cited by: 7
Author(s): Lulu Wang, Qing Liu, Mengnan Chai, Huihuang Chen, Mohammad Aslam, Xiaoping Niu, Yuan Qin, Hanyang Cai
Software Mentions: 1
Published: over 5 years ago

10.1042/BSR20190303

Identification of exosomal miR-455-5p and miR-1255a as therapeutic targets for breast cancer
Cited by: 19
Author(s): Ying Xin, Xueqiang Wang, Kexin Meng, Chao Ni, Zhenye Lv, Dandan Guan
Software Mentions: 1
Published: over 6 years ago

10.1038/s41398-020-00904-4

Tauopathy in the young autistic brain: novel biomarker and therapeutic target
Cited by: 49
Author(s): Iris Grigg, Yanina Ivashko-Pachima, Tom Aharon Hait, Vlasta Korenková, Olga Touloumi, Roza Lagoudaki, Anke Van Dijck, Zlatko Marušić, Mirna Aničić, Jurica Vuković, R. Frank Kooy, Nikolaos Grigoriadis, Illana Gozes
Software Mentions: 1
Published: about 6 years ago

10.1038/sdata.2016.103

A microarray whole-genome gene expression dataset in a rat model of inflammatory corneal angiogenesis
Cited by: 8
Author(s): Anthony Mukwaya, Jessica M. Lindvall, Maria Xeroudaki, Beatrice Bourghardt Peebo, Zaheer Ali, Anton Lennikov, Lasse D. Jensen, Neil Lagali
Software Mentions: 1
Published: over 9 years ago

10.1042/BSR20181434

MicroRNA-140-5p inhibits cell proliferation, migration and promotes cell apoptosis in gastric cancer through the negative regulation of THY1-mediated Notch signaling
Cited by: 20
Author(s): Keng‐Liang Wu, Jun Zhang, Chao Lin, Zhigang Jie
Software Mentions: 1
Published: about 7 years ago

10.1186/s12859-018-2080-y

Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing
Cited by: 3
Author(s): Armen Abnousi, Shira L. Broschat, Ananth Kalyanaraman
Software Mentions: 1
Published: over 8 years ago

10.7717/peerj.6455

Amorphous silica nanoparticles induce tumorigenesis via regulating ATP5H/SOD1-related oxidative stress, oxidative phosphorylation and EIF4G2/PABPC1-associated translational initiation
Cited by: 5
Author(s): Dongli Xie, Yang Zhou, Xiaogang Luo
Software Mentions: 1
Published: over 7 years ago

10.3390/ani9050232

Metatranscriptomic Analysis of Sub-Acute Ruminal Acidosis in Beef Cattle
Cited by: 21
Author(s): Ibukun M Ogunade, Andres A Pech-Cervantes, Hank Schweickart
Software Mentions: 1
Published: over 7 years ago

10.3390/pathogens3010211

Genome Sequencing of Xanthomonas vasicola Pathovar vasculorum Reveals Variation in Plasmids and Genes Encoding Lipopolysaccharide Synthesis, Type-IV Pilus and Type-III Secretion Effectors
Cited by: 23
Author(s): Arthur Wasukira, Max Coulter, Noorah Al-Sowayeh, Richard Thwaites, Konrad Paszkiewicz, Jerome Kubiriba, J. J. Smith, Murray Grant, David J. Studholme
Software Mentions: 1
Published: over 12 years ago

10.3389/fonc.2021.647269

Exploring the Significance of the Exon 4-Skipping Isoform of the ZNF217 Oncogene in Breast Cancer
Cited by: 2
Author(s): Aurélie Bellanger, Diep Tien Le, Julie A. Vendrell, Anne Wierinckx, Lőrinc Sándor Pongor, Jérôme Solassol, Joël Lachuer, Philippe Clézardin, Balázs Győrffy, Pascale A. Cohen
Software Mentions: 1
Published: about 5 years ago

10.18632/aging.104099

Comprehensive circular RNA expression profiling constructs a ceRNA network and identifies hsa_circ_0000673 as a novel oncogene in distal cholangiocarcinoma
Cited by: 5
Author(s): Xin Zhao, Xinxue Zhang, Zhigang Zhang, Zhe Liu, Jiang Zhu, Shaocheng Lyu, Lixin Li, Ren Lang, Qiang He
Software Mentions: 1
Published: over 5 years ago

10.1038/srep09342

The bacterial communities associated with fecal types and body weight of rex rabbits
Cited by: 95
Author(s): Bo Zeng, Shunshun Han, Ping Wang, Bin Wen, Wensu Jian, Wei Guo, Zhiju Yu, Debin Du, Xiangchao Fu, Fanli Kong, Mingyao Yang, Xiaohui Si, Jiangchao Zhao, Ying Li
Software Mentions: 1
Published: over 11 years ago

10.3389/fonc.2021.677111

The RNA-Binding Protein NELFE Promotes Gastric Cancer Growth and Metastasis Through E2F2
Cited by: 5
Author(s): Changyu Chen, Qiang Zheng, Shubo Pan, Wenzheng Chen, Jianfeng Huang, Yi Cao, Yi Tu, Zhengrong Li, Changjun Yu, Zhigang Jie
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-020-6546-8

Comparative transcriptome analysis uncovers regulatory roles of long non-coding RNAs involved in resistance to powdery mildew in melon
Cited by: 20
Author(s): Chao Gao, Jinyue Sun, Yushu Dong, Chongqi Wang, Shijun Xiao, Longfei Mo, Jiao ZiGao
Software Mentions: 1
Published: over 6 years ago

10.1534/g3.117.043331

Functional Profiling of Transcription Factor Genes inNeurospora crassa
Cited by: 46
Author(s): Alexander J. Carrillo, Patrick Schacht, Ilva E. Cabrera, Johnathon Blahut, Loren Prudhomme, Sarah Dietrich, Thomas Bekman, Jennifer Mei, Cristian Carrera, Vivian Chen, Isaiah Clark, Gerardo Fierro, Logan Ganzen, Jose Orellana, Shelby Wise, Kyeongcheol Yang, Hui Zhong, Katherine A. Borkovich
Software Mentions: 1
Published: almost 9 years ago

10.1534/g3.117.1129

Differential Expression of miRNAs in the Respiratory Tree of the Sea Cucumber Apostichopus japonicus Under Hypoxia Stress
Cited by: 20
Author(s): Da Huo, Lina Sun, Xiaoni Li, Xiaoshang Ru, Shilin Liu, Libin Zhang, Lili Xing, Hongsheng Yang
Software Mentions: 1
Published: almost 9 years ago

Projects: cran: pheatmap

Science Score: 75/100

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Papers Mentioning pheatmap 2,572