cran: pheatmap | Projects | Ecosyste.ms: Papers

10.1093/jxb/eraa347

Developmentally controlled changes during Arabidopsis leaf development indicate causes for loss of stress tolerance with age
Cited by: 13
Author(s): Aakansha Kanojia, Saurabh Gupta, Maria Benina, Alisdair R. Fernie, Bernd Mueller‐Roeber, Tsanko Gechev, Paul P. Dijkwel
Software Mentions: 1
Published: almost 6 years ago

10.1093/jxb/ery335

<i>bHLH92</i>from sheepgrass acts as a negative regulator of anthocyanin/proanthocyandin accumulation and influences seed dormancy
Cited by: 39
Author(s): Pincang Zhao, Xiaoxia Li, Junjie Jia, Ye Yuan, Shuangyan Chen, Dongmei Qi, Long Cheng, Gongshe Liu
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.54095

Circulating myeloid cells invade the central nervous system to mediate cachexia during pancreatic cancer
Cited by: 32
Author(s): Kevin G. Burfeind, Xiao‐Dong Zhu, Mason A. Norgard, Peter R. Levasseur, Christian Huisman, Abigail C. Buenafe, Brennan Olson, Katherine A. Michaelis, Eileen Ruth S. Torres, Sophia Jeng, Shannon K. McWeeney, Jacob Raber, Daniel L. Marks
Software Mentions: 1
Published: over 6 years ago

10.3390/jcm10050998

High Comorbidity Burden in Patients with SLE: Data from the Community-Based Lupus Registry of Crete
Cited by: 21
Author(s): Irini Gergianaki, Panagiotis Garantziotis, Christina Adamichou, Ioannis Saridakis, G Spyrou, Prodromos Sidiropoulos, George Βertsias
Software Mentions: 1
Published: over 5 years ago

10.1111/jcmm.16190

Genome‐wide data mining to construct a competing endogenous RNA network and reveal the pivotal therapeutic targets of Parkinson's disease
Cited by: 4
Author(s): Jing Zhang, Ruiying Chen, Fan Shi, Pan Chyr Yang, Kun Sun, Xiaojing Yang, Yulan Jin
Software Mentions: 1
Published: over 5 years ago

10.1111/jcmm.16092

Characterizing heterogeneity of non‐small cell lung tumour microenvironment to identify signature prognostic genes
Cited by: 9
Author(s): Kai Mi, Fuhui Chen, Zhipeng Qian, Jing Chen, Dongxu Lv, Chunlong Zhang, Yanjun Xu, Hongguang Wang, Yuepeng Zhang, Yanan Jiang, Desi Shang
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2020.579776

CD4+CD8+ T-Lymphocytes in Xenogeneic and Human Graft-versus-Host Disease
Cited by: 7
Author(s): Kutaiba Alhaj Hussen, David Michonneau, Vincent Biajoux, Seydou Keita, Laetitia Dubouchet, Elisabeth Nelson, Niclas Setterblad, Hélène Le Buanec, Jean‐David Bouaziz, Fabien Guimiot, Gérard Socié, Bruno Canque
Software Mentions: 1
Published: over 5 years ago

10.1111/jcmm.15835

Identification and validation of critical alternative splicing events and splicing factors in gastric cancer progression
Cited by: 6
Author(s): Haoran Feng, Zhijian Jin, Kun Liu, Yi Peng, Songyao Jiang, Changgang Wang, Jiele Hu, Xiaofeng Shen, Weihua Qiu, Xi Cheng, Ren Zhao
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2021.612144

Hepcidin Upregulation in Lung Cancer: A Potential Therapeutic Target Associated With Immune Infiltration
Cited by: 38
Author(s): Yumei Fan, Bing Liu, Fei Chen, Zhen Song, Bihui Han, Yanxiu Meng, Jiajie Hou, Pengxiu Cao, Yan‐Zhong Chang, Karsoon Tan
Software Mentions: 1
Published: over 5 years ago

10.1111/jcmm.14395

Identification and development of long non‐coding RNA‐associated regulatory network in colorectal cancer
Cited by: 18
Author(s): Hongda Pan, Jianji Pan, Shibo Song, Lei Ji, Hong Liu, Zhangru Yang
Software Mentions: 1
Published: about 7 years ago

10.3389/fimmu.2020.00029

CD44 Loss Disrupts Lung Lipid Surfactant Homeostasis and Exacerbates Oxidized Lipid-Induced Lung Inflammation
Cited by: 24
Author(s): Yifei Dong, Arif A. Arif, Jian Guo, Zongyi Ha, Sally S. M. Lee-Sayer, Grace F. T. Poon, Manisha Dosanjh, Calvin D. Roskelley, Tao Huan, Pauline Johnson
Software Mentions: 1
Published: over 6 years ago

10.7150/jca.50407

Systematic analysis of the function and prognostic value of RNA binding proteins in Colon Adenocarcinoma
Cited by: 1
Author(s): Xuewei Qi, Zeyu Liu, Chenglong Zhang, Ming Yang, Yuxiang Wan, Jinchang Huang, Lin Xu
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2021.653085

Kinetics of the Cellular and Transcriptomic Response to Eimeria maxima in Relatively Resistant and Susceptible Chicken Lines
Cited by: 12
Author(s): Abi Bremner, Sung-Won Kim, Katrina M. Morris, Matthew J. Nolan, Dominika Borowska, Wu Z, Fiona M. Tomley, Damer P. Blake, Rachel Hawken, Pete Kaiser, Lonneke Vervelde
Software Mentions: 1
Published: over 5 years ago

10.7150/jca.41733

Untargeted Metabolomics Analysis of Esophageal Squamous Cell Carcinoma Discovers Dysregulated Metabolic Pathways and Potential Diagnostic Biomarkers
Cited by: 23
Author(s): Zhaowei Zhu, Qi Zheng, Ji Zhang, Wenhua Xue, Lifeng Li, Zhibo Shen, Zeyun Li, Yanggang Yuan, Wenbin Wang, Jie Zhao
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2017.01880

Nanopore Long-Read Guided Complete Genome Assembly of Hydrogenophaga intermedia, and Genomic Insights into 4-Aminobenzenesulfonate, p-Aminobenzoic Acid and Hydrogen Metabolism in the Genus Hydrogenophaga
Cited by: 20
Author(s): Han Ming Gan, Yin P. Lee, Christopher M. Austin
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2021.708009

A Comparative Transcriptome Between Anti-drug Sensitive and Resistant Candida auris in China
Cited by: 3
Author(s): Wenkai Zhou, Xiuzhen Li, Yiqing Lin, Wei Yan, Shuling Jiang, Xiaotian Huang, Xinglong Yang, Dan Qiao, Na Li
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2021.628838

Assessment of the Distribution and Safety of Tetragenococcus muriaticus for Potential Application in the Preparation of Chinese Grasshopper Sub Shrimp Paste
Cited by: 8
Author(s): Xue Sang, Xinxiu Ma, Yanan Zhang, Hongshun Hao, Jingran Bi, Gongliang Zhang, Hongman Hou
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.01774

Physiological and Ecological Responses of Photosynthetic Processes to Oceanic Properties and Phytoplankton Communities in the Oligotrophic Western Pacific Ocean
Cited by: 8
Author(s): Yuqiu Wei, Zhuo Chen, Congcong Guo, Qi Zhong, Chao Wu, Jun Sun
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2021.628538

Comparative Genomic Analysis of the Foodborne Pathogen Burkholderia gladioli pv. cocovenenans Harboring a Bongkrekic Acid Biosynthesis Gene Cluster
Cited by: 5
Author(s): Zong–Gen Peng, Tania Dottorini, Yue Hu, Menghan Li, Shuling Yan, Séamus Fanning, Michelle Baker, Jin Xu, Fengqin Li
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.00138

Formation of a Mixed-Species Biofilm Is a Survival Strategy for Unculturable Lactic Acid Bacteria and Saccharomyces cerevisiae in Daqu, a Chinese Traditional Fermentation Starter
Cited by: 40
Author(s): Yu Fan, Xiaoning Huang, Jing Yu Chen, Bei‐Zhong Han
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.00792

Metabolic Insights Into Infochemicals Induced Colony Formation and Flocculation in Scenedesmus subspicatus Unraveled by Quantitative Proteomics
Cited by: 10
Author(s): Sebastiana Roccuzzo, Narciso Couto, Esther Karunakaran, Rahul Vijay Kapoore, Thomas O. Butler, Joy Mukherjee, Erika M Hansson, Andrew P. Beckerman, Jagroop Pandhal
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.01533

A Systems-Wide Analysis of Proteolytic and Lipolytic Pathways Uncovers The Flavor-Forming Potential of The Gram-Positive Bacterium Macrococcus caseolyticus subsp. caseolyticus
Cited by: 19
Author(s): Shahneela Mazhar, Kieran N. Kilcawley, Colin Hill, Olivia McAuliffe
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2021.652758

Response of Root-Associated Bacterial Communities to Different Degrees of Soft Rot Damage in Amorphophallus konjac Under a Robinia pseudoacacia Plantation
Cited by: 3
Author(s): Fei He
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2017.01817

Rapid Gene Turnover as a Significant Source of Genetic Variation in a Recently Seeded Population of a Healthcare-Associated Pathogen
Cited by: 39
Author(s): Lucía Graña-Miraglia, Luis Lozano, Consuelo Velázquez, Patricia Volkow-Fernández, Ángeles Pérez-Oseguera, Miguel A. Cevallos, Santiago Castillo-Ramírez
Software Mentions: 1
Published: almost 9 years ago

10.7554/eLife.55456

Phylogenetic variation in cortical layer II immature neuron reservoir of mammals
Cited by: 34
Author(s): Chiara La Rosa, Francesca Cavallo, Alessandra Pecora, Matteo Chincarini, Ugo Ala, Chris G. Faulkes, Juan Nácher, Bruno Cozzi, Chet C. Sherwood, Irmgard Amrein, Luca Bonfanti
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2019.00090

Lactobacillus plantarum PFM 105 Promotes Intestinal Development Through Modulation of Gut Microbiota in Weaning Piglets
Cited by: 68
Author(s): Tianwei Wang, Kunling Teng, Yayong Liu, Weixiong Shi, Jie Zhang, EnQiu Dong, Xin Zhang, Yong Tao, Jin Zhong
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.00714

Distinct Gut Microbiota and Metabolite Profiles Induced by Different Feeding Methods in Healthy Chinese Infants
Cited by: 34
Author(s): Na Li, Fang Yan, Nana Wang, Yue Song, Yingxue Yue, Jiaqi Guan, Bailiang Li, Huo Gui-cheng
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.01657

Analysis of Microbiota Structure and Potential Functions Influencing Spoilage of Fresh Beef Meat
Cited by: 12
Author(s): Bo Kyoung Hwang, HyeLim Choi, Sang Ho Choi, Bong Soo Kim
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2019.03052

Genomic Characterization of Antibiotic Resistant Escherichia coli Isolated From Domestic Chickens in Pakistan
Cited by: 19
Author(s): Muhammad Rafique, Robert F. Potter, Aura Ferreiro, Meghan A. Wallace, Abdul Rahim, Akbar Ali Malik, N. Siddique, Muhammad Abbas, Alaric W. D’Souza, Carey-Ann D. Burnham, Naeem Ali, Gautam Dantas
Software Mentions: 1
Published: over 6 years ago

10.1155/2019/7350414

Genome-Wide Identification, Characterization, and Expression Analysis of the Grapevine Superoxide Dismutase (SOD) Family
Cited by: 25
Author(s): Xin Hu, Chenyu Hao, Zong‐Ming Cheng, Yan Zhong
Software Mentions: 1
Published: over 7 years ago

10.1186/s13046-019-1488-1

Human bone marrow mesenchymal stem cells-derived microRNA-205-containing exosomes impede the progression of prostate cancer through suppression of RHPN2
Cited by: 58
Author(s): Shuangjian Jiang, Chengqiang Mo, Shengjie Guo, Sian Liu, Bin Huang, Xiaopeng Mao
Software Mentions: 1
Published: over 6 years ago

10.1186/s13046-019-1023-4

RETRACTED ARTICLE: MicroRNA-506 inhibits tumor growth and metastasis in nasopharyngeal carcinoma through the inactivation of the Wnt/β-catenin signaling pathway by down-regulating LHX2
Cited by: 69
Author(s): Tian Liang, Yanjun Zheng, Juan Wang, Jingyi Zhao, Daoke Yang, Zhangsuo Liu
Software Mentions: 1
Published: over 7 years ago

10.1186/s13046-018-0923-z

Elevated Na/H exchanger 1 (SLC9A1) emerges as a marker for tumorigenesis and prognosis in gliomas
Cited by: 42
Author(s): Xiudong Guan, Lanxin Luo, Gulnaz Begum, Gary Kohanbash, Qingkun Song, Aparna Rao, Nduka Amankulor, Baoshan Sun, Dandan Sun, Wang Jia
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2020.572642

Comparative Genomic Analysis Reveals Genetic Mechanisms of the Variety of Pathogenicity, Antibiotic Resistance, and Environmental Adaptation of Providencia Genus
Cited by: 17
Author(s): Chao Yuan, Wei Yi, Si Zhang, Juan Cheng, Xiaolei Cheng, Chengqian Qian, Yuhui Wang, Yang Zhang, Zhiqiu Yin, Hong Chen
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41396-020-0590-x

Anaerobic methane oxidation coupled to manganese reduction by members of the Methanoperedenaceae
Cited by: 186
Author(s): Andy O. Leu, Chen Cai, Simon Jon McIlroy, Gordon Southam, Victoria J. Orphan, Zhiguo Yuan, Shihu Hu, Gene W. Tyson
Software Mentions: 1
Published: over 6 years ago

10.1186/s40246-018-0186-y

Germline TP53 and MSH6 mutations implicated in sporadic triple-negative breast cancer (TNBC): a preliminary study
Cited by: 8
Author(s): Dandan Yi, Lei Xu, Jiaqi Luo, Xiaobin You, Tao Huang, Yi Zi, Xiaoting Li, Ru Wang, Zaixuan Zhong, Xiaoqiao Tang, Ang Li, Yujian Shi, Jianmei Rao, Yifen Zhang, Jianfeng Sang
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2021.669785

Different Cultivation Environments Affect the Yield, Bacterial Community and Metabolites of Cordyceps cicadae
Cited by: 9
Author(s): Zhaoying Zeng, Dan Mou, Li Luo, Wenlin Zhong, Dong‐Tsamn Lin, Xiao Zou
Software Mentions: 1
Published: over 5 years ago

10.1155/2021/5568411

Integrated Analysis of the Roles of RNA Binding Proteins and Their Prognostic Value in Clear Cell Renal Cell Carcinoma
Cited by: 5
Author(s): Bowen Wang, Haoran Zhao, Shaobin Ni, Beichen Ding
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2020.581698

Horizontal Gene Transfer and Tandem Duplication Shape the Unique CAZyme Complement of the Mycoparasitic Oomycetes Pythium oligandrum and Pythium periplocum
Cited by: 8
Author(s): Dong Liang, Christian B. Andersen, Ramesh R. Vetukuri, Daolong Dou, Laura J. Grenville‐Briggs
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-017-03708-7

The CCR4-NOT complex contributes to repression of Major Histocompatibility Complex class II transcription
Cited by: 23
Author(s): Alfonso Rodríguez-Gil, Olesja Ritter, Vera V. Saul, Jochen Wilhelm, Chen-Yuan Charlie Yang, Rudolf Grosschedl, Yumiko Imai, Keiji Kuba, Michael Kracht, M. Lienhard Schmitz
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-02506-5

Revealing the insoluble metasecretome of lignocellulose-degrading microbial communities
Cited by: 28
Author(s): Anna Alessi, Susannah Bird, Joseph P. Bennett, Nicola C. Oates, Yang Li, Adam Dowle, Igor Polikarpov, J. Peter W. Young, Simon J. McQueen‐Mason, Neil C. Bruce
Software Mentions: 1
Published: about 9 years ago

10.1038/s41419-020-03111-7

Targeting tumor cell-derived CCL2 as a strategy to overcome Bevacizumab resistance in ETV5+ colorectal cancer
Cited by: 24
Author(s): Haoran Feng, Kun Liu, Xiaonan Shen, Juyong Liang, Changgang Wang, Weihua Qiu, Xi Cheng, Ren Zhao
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41419-021-03856-9

TRPM2 promotes pancreatic cancer by PKC/MAPK pathway
Cited by: 25
Author(s): Rui Lin, Xiao Bao, Hui Wang, Sibo Zhu, Zhongyan Liu, Quanning Chen, Kaixing Ai, Baomin Shi
Software Mentions: 1
Published: about 5 years ago

10.3390/metabo10090337

Delayed Motor Milestones Achievement in Infancy Associates with Perturbations of Amino Acids and Lipid Metabolic Pathways
Cited by: 2
Author(s): Rebecca K. Vinding, Daniela Rago, Rachel S. Kelly, Gözde Gürdeniz, Morten Arendt Rasmussen, Jakob Stokholm, Klaus Bønnelykke, Augusto A. Litonjua, Scott T. Weiss, Jessica Lasky‐Su, Hans Bisgaard, Bo Chawes
Software Mentions: 1
Published: almost 6 years ago

10.3389/fonc.2020.00326

Gastric Cancer Cell-Derived Exosomal microRNA-23a Promotes Angiogenesis by Targeting PTEN
Cited by: 44
Author(s): Jie Du, Yuan Liu, Ji Li, Jinming Zhao, Xu‐Yong Lin
Software Mentions: 1
Published: over 6 years ago

10.18632/aging.202606

Identification of miRNAs as diagnostic and prognostic markers in hepatocellular carcinoma
Cited by: 6
Author(s): Hao Liang, Mingxing Xu, Xiong Zhang, Kunpeng Hu, Jiarui Yang, Mingbo Cao, Zhaozhong Zhong, Zhicheng Yao, Meihai Deng, Bo Liu
Software Mentions: 1
Published: over 5 years ago

10.1097/MD.0000000000019612

Potential mechanisms and serum biomarkers involved in sex differences in pulmonary arterial hypertension
Cited by: 3
Author(s): Chan Li, Zeyu Zhang, Qian Xu, Ting Wu, Ruizheng Shi
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA120.014948

The G4 resolvase RHAU modulates mRNA translation and stability to sustain postnatal heart function and regeneration
Cited by: 5
Author(s): Mingyang Jiang, Han Hu, Ke Zhao, Ruo‐Min Di, Xinyi Huang, Yingchao Shi, Yunyun Yue, Junwei Nie, Shan Yu, Wengong Wang, Zhongzhou Yang
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2019.00372

Hemorrhagic Fever-Causing Arenaviruses: Lethal Pathogens and Potent Immune Suppressors
Cited by: 50
Author(s): Morgan Brisse, Hinh Ly
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-019-6103-5

Complex and dynamic transcriptional changes allow the helminth Fasciola gigantica to adjust to its intermediate snail and definitive mammalian hosts
Cited by: 24
Author(s): Xiaoxuan Zhang, Krystyna Cwiklinski, Rui-Si Hu, Wei Zheng, Zhao-An Sheng, Fu-Kai Zhang, Hany M. Elsheikha, John P. Dalton, Xing‐Quan Zhu
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12967-019-02145-6

Long non-coding RNA BZRAP1-AS1 silencing suppresses tumor angiogenesis in hepatocellular carcinoma by mediating THBS1 methylation
Cited by: 32
Author(s): Weiwei Wang, Guoyong Chen, Bing Wang, Zheng Yuan, Guangbo Liu, Biao Niu, Yongfeng Chen, Shaotang Zhou, Jin He, Hao Xue
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-020-6715-9

Genome-wide analysis of the citrus B3 superfamily and their association with somatic embryogenesis
Cited by: 10
Author(s): Zheng Liu, Xiao Xia Ge, Xiao Meng Wu, Qiang Xu, Ross G. Atkinson, Guo Wen
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-04328-x

Transcriptome changes between compatible and incompatible graft combination of Litchi chinensis by digital gene expression profile
Cited by: 47
Author(s): Zhe Chen, Jietang Zhao, Fuchu Hu, Yonghua Qin, Xianghe Wang, Guibing Hu
Software Mentions: 1
Published: about 9 years ago

10.3389/fonc.2021.694594

Anti-Tumor Effects of BDH1 in Acute Myeloid Leukemia
Cited by: 5
Author(s): Fei Han, Huanhuan Zhao, Jun Lü, Weina Yun, Lingling Yang, Yude Lou, Dan Su, Xin Chen, Shixuan Zhang, Hanwei Jin, Xiang Li, Jie Sun, He Huang, Qishan Wang, Xi Jiang
Software Mentions: 1
Published: about 5 years ago

10.1186/s12870-019-1876-x

FtMYB8 from Tartary buckwheat inhibits both anthocyanin/Proanthocyanidin accumulation and marginal Trichome initiation
Cited by: 16
Author(s): Yu‐Wen Huang, Qi Wu, Shuang Wang, Jiaqi Shi, Qixin Dong, Panfeng Yao, Guannan Shi, Shuangxiu Xu, Renyu Deng, Chenglei Li, Hui Chen, Huihui Zhao
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-020-6479-2

Genome-wide analysis of the NAC transcription factor family in broomcorn millet (Panicum miliaceum L.) and expression analysis under drought stress
Cited by: 27
Author(s): Zhongying Shan, Yanmiao Jiang, Haiquan Li, Jian-Wei Guo, Ming Dong, Jianan Zhang, Guoqing Liu
Software Mentions: 1
Published: over 6 years ago

10.1038/s41419-020-03348-2

BTF3 confers oncogenic activity in prostate cancer through transcriptional upregulation of Replication Factor C
Cited by: 9
Author(s): Yuan Zhang, Xiang Gao, Jingyan Yi, Xiaolin Sang, Zhihong Dai, Tao Zhou, Min Wang, Limeng Shen, Yaxun Jia, Xie Daqing, Hai‐Ling Margaret Cheng, Zhiyu Liu, Pixu Liu
Software Mentions: 1
Published: over 5 years ago

10.1155/2020/8919534

Identification of miRNA-mRNA Crosstalk in Respiratory Syncytial Virus- (RSV-) Associated Pediatric Pneumonia through Integrated miRNAome and Transcriptome Analysis
Cited by: 10
Author(s): Xu Zhang, Feng Huang, Diyuan Yang, Tao Peng, Gen Liu
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.581610

Comparison of Bacterial Microbiota in Raw Mare’s Milk and Koumiss Using PacBio Single Molecule Real-Time Sequencing Technology
Cited by: 8
Author(s): Meng Zhang, Na Le Dang, Dongyan Ren, Feiyan Zhao, Ruirui Lv, Teng Ma, Qiuhua Bao, Bilige Menghe, Wenjun Liu
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-017-07570-5

Chronic low-level expression of HIV-1 Tat promotes a neurodegenerative phenotype with aging
Cited by: 65
Author(s): Alex M. Dickens, Seung Wan Yoo, Alfred C. Chin, Jiadi Xu, Tory P. Johnson, Amanda L. Trout, Kurt F. Hauser, Norman J. Haughey
Software Mentions: 1
Published: about 9 years ago

10.3389/fnins.2019.00909

Linear Registration of Brain MRI Using Knowledge-Based Multiple Intermediator Libraries
Cited by: 9
Author(s): Mengjie Zhang, Yanqiu Feng, Wufan Chen, Xin Li, Andréia V. Faria, Qianjin Feng, Susumu Mori
Software Mentions: 1
Published: almost 7 years ago

10.3390/cancers13143513

Expression of Retroelements in Cervical Cancer and Their Interplay with HPV Infection and Host Gene Expression
Cited by: 6
Author(s): Gislaine Curty, Albert N. Menezes, Ayslan Castro Brant, Miguel de Mulder Rougvie, Miguel Ângelo Martins Moreira, Marcelo A. Soares
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers12071811

Proliferative Classification of Intracranially Injected HER2-positive Breast Cancer Cell Lines
Cited by: 18
Author(s): Yoshihiro Kuroiwa, Jun Nakayama, Chihiro Adachi, Takafumi Inoue, Shinya Watanabe, Kentaro Semba
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers10090317

Transcriptome Signatures of Canine Mammary Gland Tumors and Its Comparison to Human Breast Cancers
Cited by: 18
Author(s): Kanghoon Lee, Hyoung-Min Park, Keun Hong Son, Teo Jeon Shin, Je‐Yoel Cho
Software Mentions: 1
Published: almost 8 years ago

10.3389/fonc.2021.647236

Autophagy-Related Long Non-coding RNA Is a Prognostic Indicator for Bladder Cancer
Cited by: 30
Author(s): Jiaming Wan, Cheng Guo, Hongpeng Fang, Zhongye Xu, Yongwei Hu, Yun Luo
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21030975

Genome-Wide Analysis of the MYB Transcription Factor Superfamily in Physcomitrella patens
Cited by: 32
Author(s): Xiaojun Pu, Lixin Yang, Lina Liu, Xueyi Dong, Silin Chen, Zexi Chen, Gaojing Liu, Yulin Jia, Wenya Yuan, Li Liu
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-018-4861-0

Mixed evolutionary origins of endogenous biomass-depolymerizing enzymes in animals
Cited by: 6
Author(s): Wai Hoong Chang, Alvina G. Lai
Software Mentions: 1
Published: about 8 years ago

10.3389/fgene.2020.592128

Comparative mRNA and LncRNA Analysis of the Molecular Mechanisms Associated With Low Silk Production in Bombyx mori
Cited by: 4
Author(s): Jinghua Ruan, Meiyu Wu, Xiaogang Ye, Shuo Zhao, Jianshe Liang, Lupeng Ye, Zhengying You, Boxiong Zhong
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-017-11448-x

Spatiotemporal heterogeneity of core functional bacteria and their synergetic and competitive interactions in denitrifying sulfur conversion-assisted enhanced biological phosphorus removal
Cited by: 17
Author(s): Yan Zhang, Man Yu, Jianhua Guo, Di Wu, Zheng-Shuang Hua, Guanghao Chen, Hui Lü
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-12893-4

Shift in bacterioplankton diversity and structure: Influence of anthropogenic disturbances along the Yarlung Tsangpo River on the Tibetan Plateau, China
Cited by: 41
Author(s): Peifang Wang, Xun Wang, Chao Wang, Lingzhan Miao, Jun Hou, Qiusheng Yuan
Software Mentions: 1
Published: almost 9 years ago

10.3389/fonc.2019.01578

Identification of a Two-Gene (PML-EPB41) Signature With Independent Prognostic Value in Osteosarcoma
Cited by: 7
Author(s): Shengye Liu, Jiamei Liu, Xuechen Yu, Tao Shen, Qin Fu
Software Mentions: 1
Published: over 6 years ago

10.3389/fonc.2021.640910

Molecular and Clinical Characterization of UBE2S in Glioma as a Biomarker for Poor Prognosis and Resistance to Chemo-Radiotherapy
Cited by: 6
Author(s): Li Hu, Xingbo Cheng, Zev A. Binder, Zhibin Han, Yibo Yin, Donald M. O’Rourke, Sida Wang, Yumeng Feng, Changjiang Weng, Anhua Wu, Zhiguo Lin
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms21186782

Gut Microbiota-Mediated Inflammation and Gut Permeability in Patients with Obesity and Colorectal Cancer
Cited by: 55
Author(s): Lidia Sánchez-Alcoholado, Rafael Ordóñez, A. Otero, Isaac Plaza-Andrade, Aurora Laborda-Illanes, J. A. Medina, Bruno Ramos‐Molina, Jaime Gómez-Millán, María Isabel Queipo-Ortuño
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-017-14453-2

Quantitative proteomic Analysis Reveals up-regulation of caveolin-1 in FOXP3-overexpressed human gastric cancer cells
Cited by: 5
Author(s): Duyi Pan, Jing Gao, Xiaoqing Zeng, Guansheng Ma, Na Li, Xuanjing Huang, Xuanling Du, Qing Miao, Jie Lian, Lili Xu, Hu Zhou, Shiyao Chen
Software Mentions: 1
Published: almost 9 years ago

10.3390/life11060544

Extensive Metabolite Profiling in the Unexploited Organs of Black Tiger for Their Potential Valorization in the Pharmaceutical Industry
Cited by: 2
Author(s): Jianfei Gao, Kangning Xiong, Wei Zhou, Weijie Li
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-017-15369-7

First insights into the pleiotropic role of vrf (yedF), a newly characterized gene of Salmonella Typhimurium
Cited by: 2
Author(s): Clara Ballesté-Delpierre, Dietmar Fernández‐Orth, Mario Ferrer-Navarro, Ramón Díaz-Peña, Antonia Odena-Caballol, Eliandre de Oliveira, Anna Fàbrega, Jordi Vila
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-017-14894-9

Female mice lacking Pald1 exhibit endothelial cell apoptosis and emphysema
Cited by: 12
Author(s): Isabel Egaña, Hiroshi Kaito, Anja Nitzsche, Lore Becker, Carolina Ballester‐López, Colin Niaudet, Milena Petkova, Wei Liu, Michael Vanlandewijck, Alexandra Vernaleken, Thomas Klopstock, Helmut Fuchs, Valérie Gailus‐Durner, Martin Hrabě de Angelis, Helge Rask‐Andersen, Henrik J. Johansson, Janne Lehtiö, Liqun He, Ali Önder Yildirim, Mats Hellström
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12864-021-07501-9

Transcriptomes analysis reveals novel insight into the molecular mechanisms of somatic embryogenesis in Hevea brasiliensis
Cited by: 15
Author(s): Ying Wang, Hui‐Liang Li, Yong-Kai Zhou, Dong Guo, Jiahong Zhu, Shi-Qing Peng
Software Mentions: 1
Published: over 5 years ago

10.3390/foods10010124

Quantitative and Comparative Investigation of Plasmalogen Species in Daily Foodstuffs
Cited by: 14
Author(s): Yue Wu, Zhen Chen, Jiaping Jia, Hitoshi Chiba, Shu‐Ping Hui
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-017-15994-2

Metabolic regulatory oscillations in intertidal green seaweed Ulva lactuca against tidal cycles
Cited by: 12
Author(s): Vishal Gupta, Hemant R. Kushwaha
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-021-94831-z

Transcriptome profiling reveals potential genes involved in browning of fresh-cut eggplant (Solanum melongena L.)
Cited by: 6
Author(s): Xiaohui Liu, Aidong Zhang, Jie Zhao, Jing Shang, Zongwen Zhu, Xuexia Wu, Dingshi Zha
Software Mentions: 1
Published: about 5 years ago

10.1186/s12870-019-1809-8

Iso-Seq analysis of the Taxus cuspidata transcriptome reveals the complexity of Taxol biosynthesis
Cited by: 44
Author(s): Xue-Jun Kuang, Sijie Sun, Jianhe Wei, Ying Li, Chao Sun
Software Mentions: 1
Published: about 7 years ago

10.3389/fimmu.2020.623993

Circulating Myeloid Regulatory Cells: Promising Biomarkers in B-Cell Lymphomas
Cited by: 4
Author(s): Juliette Ferrant, Faustine Lhomme, Simon Le Gallou, Jonathan M. Irish, Mikaël Roussel
Software Mentions: 1
Published: over 5 years ago

10.3390/nu12123828

Comparison of Different Dietary Indices as Predictors of Inflammation, Oxidative Stress and Intestinal Microbiota in Middle-Aged and Elderly Subjects
Cited by: 19
Author(s): Sergio Ruiz-Saavedra, Nuria Salazar, Ana Suárez, Clara G. de los Reyes‐Gavilán, Miguel Gueimonde, Sonia González
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0229754

Methylation of SRD5A2 promoter predicts a better outcome for castration-resistant prostate cancer patients undergoing androgen deprivation therapy
Cited by: 5
Author(s): Zongwei Wang, Tuo Deng, Xingbo Long, Xueming Lin, Shulin Wu, Hongbo Wang, Rongbin Ge, Zhenwei Zhang, Chin‐Lee Wu, Mary‐Ellen Taplin, Aria F. Olumi
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-021-95901-y

Untargeted metabolomics of purple and orange-fleshed sweet potatoes reveals a large structural diversity of anthocyanins and flavonoids
Cited by: 13
Author(s): Alexandra Bennett, Elizabeth H. Mahood, Kai Fan, Gaurav D. Moghe
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0188838

Virulence genes and subclone status as markers of experimental virulence in a murine sepsis model among Escherichia coli sequence type 131 clinical isolates from Spain
Cited by: 7
Author(s): Irene Merino, Stephen Porter, Brian Johnston, Connie Clabots, Evelyn Shaw, Juan Pablo Horcajada, Rafael Cantón, Patrícia Ruíz-Garbajosa, James R. Johnson
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0235268

Dynamic longitudinal behavior in animals exposed to chronic social defeat stress
Cited by: 10
Author(s): Marlon Wendelmuth, M. Willam, Hristo Todorov, Konstantin Radyushkin, Susanne Gerber, Susann Schweiger
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21239015

Unique Role of Caffeine Compared to Other Methylxanthines (Theobromine, Theophylline, Pentoxifylline, Propentofylline) in Regulation of AD Relevant Genes in Neuroblastoma SH-SY5Y Wild Type Cells
Cited by: 13
Author(s): Daniel Janitschke, Anna Andrea Lauer, C Bachmann, Martin S. Seyfried, Heike S. Grimm, Tobias Hartmann, Marcus O. W. Grimm
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0223417

Effect of host genotype and Eimeria acervulina infection on the metabolome of meat-type chickens
Cited by: 10
Author(s): Samuel E. Aggrey, Marie C. Milfort, Alberta L. Fuller, Jianmin Yuan, Romdhane Rekaya
Software Mentions: 1
Published: almost 7 years ago

10.1002/cam4.1532

Downregulation of <scp>NDR</scp>1 contributes to metastasis of prostate cancer cells via activating epithelial‐mesenchymal transition
Cited by: 7
Author(s): Juntao Yue, Huimin Sun, Shijie Liu, Fei Yu, Shanshan Wang, Fuli Wang, Ruixiong Shen, Feng Zhu, Lei Zhang, Chen Shao
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms21239059

Exercise and the Cisd2 Prolongevity Gene: Two Promising Strategies to Delay the Aging of Skeletal Muscle
Cited by: 10
Author(s): Yuan Teng, Jing Ya Wang, Y. H. Hui, Ting Fen Tsai
Software Mentions: 1
Published: over 5 years ago

10.1186/s12870-020-02725-5

Genome-wide survey of soybean papain-like cysteine proteases and their expression analysis in root nodule symbiosis
Cited by: 9
Author(s): Songli Yuan, Danxia Ke, Rong Li, Xiangyong Li, Lei Wang, Haifeng Chen, Chanjuan Zhang, Yi Huang, Limiao Chen, Qingnan Hao, Hongli Yang, Dong Cao, Shuilian Chen, Wei Guo, Shan Zhang, Zengling Yang, Xiaojuan Zhang, Dandan Qiu, Yuefeng Guan, Xinan Zhou
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0182426

Disruption in the cecal microbiota of chickens challenged with Clostridium perfringens and other factors was alleviated by Bacillus licheniformis supplementation
Cited by: 59
Author(s): Lin Yang, Shengyu Xu, Dong Zeng, Xueqin Ni, Mingmei Zhou, Yan Zeng, Hesong Wang, Yi Zhou, Hongxiang Zhu, Kangcheng Pan, Guangyao Li
Software Mentions: 1
Published: about 9 years ago

10.1186/s12870-020-2241-9

Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)
Cited by: 21
Author(s): Yan Qin, Shenglong Bai, Wenzheng Li, Taixiang Sun, David W. Galbraith, Zefeng Yang, Yun Zhou, Guiling Sun, Bing‐Wu Wang
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-24266-6

Duplication and diversification of lectin receptor-like kinases (LecRLK) genes in soybean
Cited by: 26
Author(s): Pingli Liu, Yuan Huang, Peng-Hao Shi, Meng Yu, Jianbo Xie, Lulu Xie
Software Mentions: 1
Published: over 8 years ago

10.1002/cam4.3246

Large granular lymphocyte leukemia serum and corresponding hematological parameters reveal unique cytokine and sphingolipid biomarkers and associations with STAT3 mutations
Cited by: 9
Author(s): Kristine C. Olson, Katharine B. Moosic, Marieke K. Jones, Paige M.K. Larkin, Thomas L. Olson, Mariella Toro, Todd E. Fox, David J. Feith
Software Mentions: 1
Published: about 6 years ago

10.1002/cam4.1379

Chemotherapy and terminal skeletal muscle differentiation in <i>WT1-</i> mutant Wilms tumors
Cited by: 10
Author(s): Brigitte Royer‐Pokora, Manfred Beier, Artur Brandt, Constanze Duhme, Maike Busch, Carmen de Torres, Hans-Dieter Royer, Jaume Mora
Software Mentions: 1
Published: over 8 years ago

10.18632/aging.104099

Comprehensive circular RNA expression profiling constructs a ceRNA network and identifies hsa_circ_0000673 as a novel oncogene in distal cholangiocarcinoma
Cited by: 5
Author(s): Xin Zhao, Xinxue Zhang, Zhigang Zhang, Zhe Liu, Jiang Zhu, Shaocheng Lyu, Lixin Li, Ren Lang, Qiang He
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0250075

Gut microbiota of endangered crested ibis: Establishment, diversity, and association with reproductive output
Cited by: 8
Author(s): Jian Ran, Qiu‐Hong Wan, Sheng‐Guo Fang
Software Mentions: 1
Published: over 5 years ago

Projects: cran: pheatmap

Science Score: 75/100

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Papers Mentioning pheatmap 2,572