cran: pheatmap | Projects | Ecosyste.ms: Papers

10.1186/s13287-020-01908-z

microRNA-375 released from extracellular vesicles of bone marrow mesenchymal stem cells exerts anti-oncogenic effects against cervical cancer
Cited by: 15
Author(s): Feng Ding, Jinhua Liu, Xiaofei Zhang
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2021.726074

Characterization and Genomic Analysis of Marinobacter Phage vB_MalS-PS3, Representing a New Lambda-Like Temperate Siphoviral Genus Infecting Algae-Associated Bacteria
Cited by: 6
Author(s): Huan Liu, Kaiyang Zheng, Baohong Liu, Yantao Liang, Siyuan You, Wenjing Zhang, Xinran Zhang, Yaqi Jie, Hongbing Shao, Yong Jiang, Cui Guo, Hui He, Hualong Wang, Yeong Yik Sung, Wen Jye Mok, Li Lian Wong, Andrew McMinn, Min Wang
Software Mentions: 1
Published: almost 5 years ago

10.3390/plants9050586

Insights into the SAM Synthetase Gene Family and Its Roles in Tomato Seedlings under Abiotic Stresses and Hormone Treatments
Cited by: 39
Author(s): Parviz Heidari, Faezeeh Mazloomi, Thomas Nußbaumer, Gianni Barcaccia
Software Mentions: 1
Published: over 6 years ago

10.3389/fcimb.2015.00055

Exploring salivary microbiota in AIDS patients with different periodontal statuses using 454 GS-FLX Titanium pyrosequencing
Cited by: 19
Author(s): Fang Zhang, Shenghua He, Jie-Qi Jin, Guangyan Dong, Hong-Kun Wu
Software Mentions: 1
Published: about 11 years ago

10.3389/fmicb.2019.00528

Genomic and Physiological Traits of the Marine Bacterium Alcaligenes aquatilis QD168 Isolated From Quintero Bay, Central Chile, Reveal a Robust Adaptive Response to Environmental Stressors
Cited by: 23
Author(s): Roberto E. Durán, Valentina Méndez, Laura Rodríguez-Castro, Bárbara Barra-Sanhueza, Francisco Salvà‐Serra, Edward R. B. Moore, Eduardo Castro-Nallar, Michael Seeger
Software Mentions: 1
Published: over 7 years ago

10.3390/plants9070855

Identification of the Volatile Compounds and Observation of the Glandular Trichomes in Opisthopappus taihangensis and Four Species of Chrysanthemum
Cited by: 11
Author(s): Yanhong Guo, Tengxun Zhang, Jian Zhong, Tingting Ba, Ting Xu, Qixiang Zhang, Ming Sun
Software Mentions: 1
Published: about 6 years ago

10.1128/mBio.02767-19

CD71 + Erythroid Cells Exacerbate HIV-1 Susceptibility, Mediate trans -Infection, and Harbor Infective Viral Particles
Cited by: 28
Author(s): Afshin Namdar, Garett Dunsmore, Shima Shahbaz, Petya Koleva, Lai Xu, Juan Jovel, Stan Houston, Shokrollah Elahi
Software Mentions: 1
Published: over 6 years ago

10.1002/2211-5463.12563

New biomarkers of Kawasaki disease identified by urine proteomic analysis
Cited by: 7
Author(s): Huimin Hu, Hongwu Du, Jiawen Cui, Deqin Feng, Zhenhong Du
Software Mentions: 1
Published: over 7 years ago

10.3389/fcell.2020.00450

Conditional Knockout of PKC-δ in Osteoclasts Favors Bone Mass Accrual in Males Due to Decreased Osteoclast Function
Cited by: 5
Author(s): Shangfu Li, Tianwei He, Depeng Wu, Liangming Zhang, Ruiqiang Chen, Bin Liu, Jinbo Yuan, Jennifer Tickner, An Qin, Jiake Xu, Limin Rong
Software Mentions: 1
Published: about 6 years ago

10.3390/plants8120615

Soil Mesofauna Respond to the Upward Expansion of Deyeuxia purpurea in the Alpine Tundra of the Changbai Mountains, China
Cited by: 2
Author(s): Tao Yan, Zhongqiang Wang, Chen Ma, Hongshi He, Jiawei Xu, Yinghua Jin, Haixia Wang, Xiaona Zheng
Software Mentions: 1
Published: over 6 years ago

10.1080/21505594.2020.1747799

Molecularly defined extraintestinal pathogenic Escherichia coli status predicts virulence in a murine sepsis model better than does virotype, individual virulence genes, or clonal subset among E. coli ST131 isolates
Cited by: 12
Author(s): Irene Merino, Stephen Porter, Brian Johnston, Connie Clabots, Paul Thuras, Patrícia Ruíz-Garbajosa, Rafael Cantón, James R. Johnson
Software Mentions: 1
Published: over 6 years ago

10.7150/thno.52843

CircUbe3a from M2 macrophage-derived small extracellular vesicles mediates myocardial fibrosis after acute myocardial infarction
Cited by: 49
Author(s): Yan Wang, Chaofu Li, Ranzun Zhao, Zhimei Qiu, Changyin Shen, Zhenglong Wang, Weiwei Liu, Wei Zhang, Junbo Ge, Bei Shi
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.687489

Differential Regulation of GPCRs—Are GRK Expression Levels the Key?
Cited by: 28
Author(s): Edda S F Matthees, Raphael Haider, Carsten Hoffmann, Julia Drube
Software Mentions: 1
Published: about 5 years ago

10.1128/mBio.00728-20

Pan-GWAS of Streptococcus agalactiae Highlights Lineage-Specific Genes Associated with Virulence and Niche Adaptation
Cited by: 41
Author(s): Andrea Gori, Odile B. Harrison, Ethwako Mlia, Yo Nishihara, Jia Mun Chan, Jacquline Msefula, Macpherson Mallewa, Queen Dube, Todd D. Swarthout, Angela H. Nobbs, Martin Maiden, Neil French, Robert S. Heyderman
Software Mentions: 1
Published: about 6 years ago

10.3389/fonc.2021.694594

Anti-Tumor Effects of BDH1 in Acute Myeloid Leukemia
Cited by: 5
Author(s): Fei Han, Huanhuan Zhao, Jun Lü, Weina Yun, Lingling Yang, Yude Lou, Dan Su, Xin Chen, Shixuan Zhang, Hanwei Jin, Xiang Li, Jie Sun, He Huang, Qishan Wang, Xi Jiang
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2020.01413

Rehmannia glutinosa Replant Issues: Root Exudate-Rhizobiome Interactions Clearly Influence Replant Success
Cited by: 14
Author(s): Zhang Bao, Leslie A. Weston, Mingjie Li, Xiaocheng Zhu, Paul A. Weston, Fan Feng, Bingyong Zhang, Liuji Zhang, Li Gu, Zhongyi Zhang
Software Mentions: 1
Published: about 6 years ago

10.1242/dmm.030064

p53-independent DUX4 pathology
Cited by: 20
Author(s): Darko Bosnakovski, Micah D. Gearhart, Erik A. Toso, Olivia O. Recht, Anja Cucak, Abhinav K. Jain, Michelle C. Barton, Michael Kyba
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2020.617030

Integrative Metagenomics–Metabolomics for Analyzing the Relationship Between Microorganisms and Non-volatile Profiles of Traditional Xiaoqu
Cited by: 20
Author(s): Chi Zhao, Wei Su, Yu Mu, Yingchun Mu, Li Jiang
Software Mentions: 1
Published: over 5 years ago

10.3389/fonc.2020.00326

Gastric Cancer Cell-Derived Exosomal microRNA-23a Promotes Angiogenesis by Targeting PTEN
Cited by: 44
Author(s): Jie Du, Yuan Liu, Ji Li, Jinming Zhao, Xu‐Yong Lin
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA120.014948

The G4 resolvase RHAU modulates mRNA translation and stability to sustain postnatal heart function and regeneration
Cited by: 5
Author(s): Mingyang Jiang, Han Hu, Ke Zhao, Ruo‐Min Di, Xinyi Huang, Yingchao Shi, Yunyun Yue, Junwei Nie, Shan Yu, Wengong Wang, Zhongzhou Yang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-79733-w

Comparative genomics and metabolomics analysis of Riemerella anatipestifer strain CH-1 and CH-2
Cited by: 2
Author(s): Ji‐Bin Liu, Anchun Cheng, Mingshu Wang, Mafeng Liu, Dekang Zhu, Qiao Yang, Ying Wu, Renyong Jia, Shun Chen, Xinxin Zhao, Shaqiu Zhang, Juan Huang, Xumin Ou, Sai Mao, Qun Gao, Xingjian Wen, Ling Zhang, Yunya Liu, Yanling Yu, Bin Tian, Leichang Pan, Mujeeb Ur Rehman, Xiaoyue Chen
Software Mentions: 1
Published: over 5 years ago

10.15252/embr.201949087

Npl3 stabilizes R‐loops at telomeres to prevent accelerated replicative senescence
Cited by: 12
Author(s): Lara Pérez-Martínez, Merve Öztürk, Falk Butter, Brian Luke
Software Mentions: 1
Published: over 6 years ago

10.1186/s40104-020-00502-w

Palm oil protects α-linolenic acid from rumen biohydrogenation and muscle oxidation in cashmere goat kids
Cited by: 4
Author(s): Xue Wang, Graeme Martin, Qi Wen, Shulin Liu, Yinhao Li, Binlin Shi, Xiaoyu Guo, Yanli Zhao, Y.P. Guo, Sumei Yan
Software Mentions: 1
Published: almost 6 years ago

10.15252/embr.202051981

N ‐acetylaspartate release by glutaminolytic ovarian cancer cells sustains protumoral macrophages
Cited by: 19
Author(s): Alessio Menga, Maria Favia, Iolanda Spera, Maria Carmela Vegliante, Rosanna Gissi, Anna Grassi, Luna Laera, Alessandro Campanella, Andrea Gerbino, Giovanna Carrà, Marcella Canton, Vera Loizzi, Ciro Leonardo Pierri, Gennaro Cormio, Massimiliano Mazzone, Alessandra Castegna
Software Mentions: 1
Published: about 5 years ago

10.1186/s12967-020-02572-w

PGM5-AS1 impairs miR-587-mediated GDF10 inhibition and abrogates progression of prostate cancer
Cited by: 18
Author(s): Lei Du, Yongli Gao
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.11329

Genome-wide identification, classification, and expression analysis of the HSF gene family in pineapple (Ananas comosus)
Cited by: 7
Author(s): Lulu Wang, Qing Liu, Mengnan Chai, Huihuang Chen, Mohammad Aslam, Xiaoping Niu, Yuan Qin, Hanyang Cai
Software Mentions: 1
Published: over 5 years ago

10.3390/v13040671

Characterization of a Novel Group of Listeria Phages That Target Serotype 4b Listeria monocytogenes
Cited by: 8
Author(s): Yaxiong Song, Tracey L. Peters, Daniel W. Bryan, Lauren K. Hudson, Thomas G. Denes
Software Mentions: 1
Published: over 5 years ago

10.3390/v11111070

A Multi-Omics Study of Chicken Infected by Nephropathogenic Infectious Bronchitis Virus
Cited by: 17
Author(s): Puzhi Xu, Ping Liu, Changming Zhou, Yan Shi, Qingpeng Wu, Yulin Yang, Guyue Li, Guoliang Hu, Xiaomin Guo
Software Mentions: 1
Published: almost 7 years ago

10.1001/jamanetworkopen.2020.14622

Prediction of Overall Survival Among Female Patients With Breast Cancer Using a Prognostic Signature Based on 8 DNA Repair–Related Genes
Cited by: 16
Author(s): Dai Zhang, Shuanying Yang, Yiche Li, Jia Yao, Jian Ruan, Yi Zheng, Yao Deng, Na Li, Bajin Wei, Ying Wu, Zhen Zhai, Jun Lyu, Zhijun Dai
Software Mentions: 1
Published: almost 6 years ago

10.3390/insects12080745

Genome-Wide Identification of Neuropeptides and Their Receptors in an Aphid Endoparasitoid Wasp, Aphidius gifuensi
Cited by: 5
Author(s): Ke Xue, Zhenxiang Li, Yuqing Gao, Fang-Hua Liu, Zhenzhen Chen, He Tian, Tong‐Xian Liu, Yaobo Xu, Zhiwei Kang
Software Mentions: 1
Published: about 5 years ago

10.17179/excli2020-3083

Angiotensin receptor blocker Losartan inhibits tumor growth of colorectal cancer.
Cited by: 5
Author(s): Milad Hashemzehi, Farzad Rahmani, Mahdieh Khoshakhlagh, Amir Avan, Fereshteh Asgharzadeh, Farnaz Barneh, Reyhaneh Moradi‐Marjaneh, Atena Soleimani, Hamid Fiuji, Gordon A. Ferns, Mikhail Ryzhikov, Mohieddin Jafari, Majid Khazaei, Seyed Mahdi Hassanian
Software Mentions: 1
Published: over 5 years ago

10.3390/foods10010124

Quantitative and Comparative Investigation of Plasmalogen Species in Daily Foodstuffs
Cited by: 14
Author(s): Yue Wu, Zhen Chen, Jiaping Jia, Hitoshi Chiba, Shu‐Ping Hui
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-83497-2

Effects of maize (Zea mays) genotypes and microbial sources in shaping fall armyworm (Spodoptera frugiperda) gut bacterial communities
Cited by: 17
Author(s): Charles J. Mason, Kelli Hoover, Gary W. Felton
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2021.671694

Integrative Analysis of HTNV Glycoprotein Derived MHC II Epitopes by In Silico Prediction and Experimental Validation
Cited by: 3
Author(s): Hao Sun, Zhenhua Lü, Guoyun Xuan, Ning Liu, Tianhu Wang, Yang Liu, Mingfu Lan, Jiahao Xu, Yuancai Feng, Shuang Xu, You Lu, Baozeng Sun, Jinpeng Zhang, Xiyang Zhang, Yuanjie Sun, Shuya Yang, Yun Zhang, Yusi Zhang, Long Cheng, Duyin Jiang, Kun Yang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-84875-6

The effect of flue-curing procedure on the dynamic change of microbial diversity of tobaccos
Cited by: 9
Author(s): Binbin Hu, Kaiyuan Gu, Jiangshiqi Gong, Ke Zhang, Dan Chen, Xian He, Leo Chen, Kaixian Gao, Yan Jin, Kun Huang, Yuyan Zhu, Congming Zou
Software Mentions: 1
Published: over 5 years ago

10.1002/iid3.454

Cyclin‐dependent kinase 1 shows to be a potential genetic target for chemical cystitis
Cited by: 1
Author(s): Kun Wang, Huaping Du, Qianfeng Zhuang, Hao Lü, Ran Xu, Dong Xue
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2021.632372

Inhibition of TGF-β/Smad3 Signaling Disrupts Cardiomyocyte Cell Cycle Progression and Epithelial–Mesenchymal Transition-Like Response During Ventricle Regeneration
Cited by: 8
Author(s): Yuanyuan Peng, Wenyuan Wang, Yunzheng Fang, Haichen Hu, Nannan Chang, Meijun Pang, Ye-Fan Hu, Xueyu Li, Liang Han, Jing-Wei Xiong, Ruilin Zhang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-85433-w

Integrative analysis of the microbiome and metabolome in understanding the causes of sugarcane bitterness
Cited by: 16
Author(s): Weijuan Huang, Donglei Sun, Lijun Chen, Yuxing An
Software Mentions: 1
Published: over 5 years ago

10.1038/s41438-020-00447-1

Almond diversity and homozygosity define structure, kinship, inbreeding, and linkage disequilibrium in cultivated germplasm, and reveal genomic associations with nut and seed weight
Cited by: 14
Author(s): Stefano Pavan, Chiara Delvento, Rosa Mazzeo, Francesca Ricciardi, Pasquale Losciale, Liliana Gaeta, Nunzio D’Agostino, Francesca Taranto, Raquel Sánchez‐Pérez, Luigi M. Ricciardi, Concetta Lotti
Software Mentions: 1
Published: over 5 years ago

10.1038/s41438-020-0331-3

Genome-wide identification of microRNAs involved in the regulation of fruit ripening and climacteric stages in melon (Cucumis melo)
Cited by: 19
Author(s): Selinge Bai, Yunyun Tian, Chao Tan, Shunbuer Bai, Jinfeng Hao, Agula Hasi
Software Mentions: 1
Published: about 6 years ago

10.1038/s41438-019-0205-8

Auxin regulation involved in gynoecium morphogenesis of papaya flowers
Cited by: 10
Author(s): Ping Zhou, Mahpara Fatima, Xinyi Ma, Juan Liu, Ray Ming
Software Mentions: 1
Published: almost 7 years ago

10.3389/fcell.2021.642948

Cancer-Preventive Role of Bone Marrow-Derived Mesenchymal Stem Cells on Colitis-Associated Colorectal Cancer: Roles of Gut Microbiota Involved
Cited by: 22
Author(s): Ruohang He, Chaoqun Han, Ying Liu, Wei Qian, Xiaohua Hou
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-86511-9

Molecular mechanisms of esophageal epithelial regeneration following repair of surgical defects with acellular silk fibroin grafts
Cited by: 3
Author(s): Gökhan Gündoğdu, Mehmet Tosun, Duncan R. Morhardt, Ali Hashemi Gheinani, Khalid Algarrahi, Xuehui Yang, Kyle Costa, Cinthia Galvez Alegria, Rosalyn M. Adam, Wei Yang, Joshua R. Mauney
Software Mentions: 1
Published: over 5 years ago

10.1038/s41438-018-0027-0

The grapevine kinome: annotation, classification and expression patterns in developmental processes and stress responses
Cited by: 29
Author(s): Kaikai Zhu, Xiaolong Wang, Jinyi Liu, Jun Tang, Qunkang Cheng, Jay Chen, Zong‐Ming Cheng
Software Mentions: 1
Published: over 8 years ago

10.1038/s41398-020-00904-4

Tauopathy in the young autistic brain: novel biomarker and therapeutic target
Cited by: 49
Author(s): Iris Grigg, Yanina Ivashko-Pachima, Tom Aharon Hait, Vlasta Korenková, Olga Touloumi, Roza Lagoudaki, Anke Van Dijck, Zlatko Marušić, Mirna Aničić, Jurica Vuković, R. Frank Kooy, Nikolaos Grigoriadis, Illana Gozes
Software Mentions: 1
Published: about 6 years ago

10.3389/fcell.2021.686395

Global Screening of LUBAC and OTULIN Interacting Proteins by Human Proteome Microarray
Cited by: 0
Author(s): Lijie Zhou, Yingwei Ge, Yesheng Fu, Bo Wu, Yong Zhang, Lei Li, Chun-Ping Chu, Siying Wang, Lingqiang Zhang
Software Mentions: 1
Published: about 5 years ago

10.3389/fnins.2019.00909

Linear Registration of Brain MRI Using Knowledge-Based Multiple Intermediator Libraries
Cited by: 9
Author(s): Mengjie Zhang, Yanqiu Feng, Wufan Chen, Xin Li, Andréia V. Faria, Qianjin Feng, Susumu Mori
Software Mentions: 1
Published: almost 7 years ago

10.3389/fcimb.2020.576185

The in vitro Effects of the Probiotic Strain, Lactobacillus casei ZX633 on Gut Microbiota Composition in Infants With Diarrhea
Cited by: 8
Author(s): Xing Wang, Miao Zhang, Weidong Wang, Haoxin Lv, Hua Zhong, Yuan Liu, Zhongfang Tan
Software Mentions: 1
Published: almost 6 years ago

10.1186/s41065-021-00174-0

Development and analysis of long non-coding RNA-associated competing endogenous RNA network for osteosarcoma metastasis
Cited by: 2
Author(s): Yucheng Fu, Qi Liu, Qiyuan Bao, Junxiang Wen, Zhuochao Liu, Yuehao Hu, Guoyu He, Cheng Peng, Yanguang Xu, Weibin Zhang
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.4514

Assessing soil bacterial community and dynamics by integrated high-throughput absolute abundance quantification
Cited by: 57
Author(s): Jun Lou, Li Yang, Haizhen Wang, Laosheng Wu, Jianming Xu
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-021-89294-1

A candidate gene identified in converting platycoside E to platycodin D from Platycodon grandiflorus by transcriptome and main metabolites analysis
Cited by: 12
Author(s): Xinglong Su, Yingying Liu, Lu Han, Zhaojian Wang, Mengyang Cao, Liping Wu, Weimin Jiang, Fancheng Meng, Xiaohu Guo, Nianjun Yu, Shuangying Gui, Shihai Xing, Daiyin Peng
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.7127

As old as the hills: Pliocene palaeogeographical processes influence patterns of genetic structure in the widespread, common shrub Banksia sessilis
Cited by: 5
Author(s): Heidi Nistelberger, Sarah‐Louise Tapper, David Coates, Shelley McArthur, Margaret Byrne
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.11496

Identification of potential gene signatures associated with osteosarcoma by integrated bioinformatics analysis
Cited by: 13
Author(s): Yutao Jia, Yang Liu, Zhihua Han, Rong Tian
Software Mentions: 1
Published: about 5 years ago

10.1016/j.omtn.2019.04.013

MicroRNA-1305 Inhibits the Stemness of LCSCs and Tumorigenesis by Repressing the UBE2T-Dependent Akt-Signaling Pathway
Cited by: 35
Author(s): Xiaoyong Wei, Xiaolong You, Jianlong Zhang, Cuncai Zhou
Software Mentions: 1
Published: about 7 years ago

10.1093/gigascience/giz115

Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome
Cited by: 33
Author(s): Bo Song, Yue Song, Yuan Fang, Elizabeth Balyejusa Kizito, Sandra Ndagire Kamenya, Pamela Nahamya Kabod, Huan Liu, Samuel Muthemba, Robert Kariba, Joyce Njuguna, Solomon Maina, Francesca Stomeo, Appolinaire Djikeng, Prasad S. Hendre, Xiaoli Chen, Wenbin Chen, Xiuli Li, Wenjing Sun, Sibo Wang, Shifeng Cheng, Alice Muchugi, Ramni Jamnadass, Howard Shapiro, Allen Van Deynze, Huanming Yang, Jian Wang, Xun Xu, Damaris Achieng Odeny, Xin Liu
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-021-90887-z

Role of cytoplasmic localization of maspin in promoting cell invasion in breast cancer with aggressive phenotype
Cited by: 5
Author(s): Tomohiko Sakabe, Makoto Wakahara, Goshi Shiota, Yoshihisa Umekita
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.4030

Whole genome sequencing of Rhodotorula mucilaginosa isolated from the chewing stick (Distemonanthus benthamianus): insights into Rhodotorula phylogeny, mitogenome dynamics and carotenoid biosynthesis
Cited by: 19
Author(s): Han Ming Gan, Bolaji N. Thomas, Nicole T. Cavanaugh, Grace Morales, Ashley N Mayers, Michael A. Savka, André O. Hudson
Software Mentions: 1
Published: almost 9 years ago

10.7717/peerj.7544

Crucial lncRNAs associated with adipocyte differentiation from human adipose-derived stem cells based on co-expression and ceRNA network analyses
Cited by: 15
Author(s): Kana Chen, Shujie Xie, Wujun Jin
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12967-019-02145-6

Long non-coding RNA BZRAP1-AS1 silencing suppresses tumor angiogenesis in hepatocellular carcinoma by mediating THBS1 methylation
Cited by: 32
Author(s): Weiwei Wang, Guoyong Chen, Bing Wang, Zheng Yuan, Guangbo Liu, Biao Niu, Yongfeng Chen, Shaotang Zhou, Jin He, Hao Xue
Software Mentions: 1
Published: over 6 years ago

10.1590/1678-4685-GMB-2020-0054

A comparison of mRNA and circRNA expression between squamous cell carcinoma and adenocarcinoma of the lungs
Cited by: 4
Author(s): Min Yu, Yingxuan Tian, Min Wu, Jinglong Gao, Yuan Wang, Fuqiang Liu, Sen Sheng, Shufen Huo, Jun Bai
Software Mentions: 1
Published: over 6 years ago

10.1186/s12967-018-1640-2

Systematic analysis of lncRNA–miRNA–mRNA competing endogenous RNA network identifies four-lncRNA signature as a prognostic biomarker for breast cancer
Cited by: 188
Author(s): Chi Fan, Lei Ma, Ning Liu
Software Mentions: 1
Published: almost 8 years ago

10.3390/genes12040520

Actin-Related Protein 4 Interacts with PIE1 and Regulates Gene Expression in Arabidopsis
Cited by: 6
Author(s): Wen-Feng Nie, Jinyu Wang
Software Mentions: 1
Published: over 5 years ago

10.1002/fsn3.1010

Effect of differentLactobacillusspecies on volatile and nonvolatile flavor compounds in juices fermentation
Cited by: 37
Author(s): Shumao Cui, Nan Zhao, Wenwei Liu, Fang Zhao, Zheng SongYou, Weijun Wang, Wei Chen
Software Mentions: 1
Published: about 7 years ago

10.3390/nu12123828

Comparison of Different Dietary Indices as Predictors of Inflammation, Oxidative Stress and Intestinal Microbiota in Middle-Aged and Elderly Subjects
Cited by: 19
Author(s): Sergio Ruiz-Saavedra, Nuria Salazar, Ana Suárez, Clara G. de los Reyes‐Gavilán, Miguel Gueimonde, Sonia González
Software Mentions: 1
Published: over 5 years ago

10.3389/fnins.2020.00656

Non-photoreceptor Expression of Tulp1 May Contribute to Extensive Retinal Degeneration in Tulp1-/- Mice
Cited by: 10
Author(s): Arpad Palfi, Adlet Yesmambetov, Pete Humphries, Karsten Hokamp, G. Jane Farrar
Software Mentions: 1
Published: about 6 years ago

10.3390/genes11080863

Extensive Genetic Connectivity and Historical Persistence Are Features of Two Widespread Tree Species in the Ancient Pilbara Region of Western Australia
Cited by: 3
Author(s): Heidi Nistelberger, Rachel M. Binks, Stephen van Leeuwen, David Coates, Shelley McArthur, B. MacDonald, Margaret Hankinson, Margaret Byrne
Software Mentions: 1
Published: about 6 years ago

10.3390/genes10110914

Genome-Wide Analysis of Basic Helix–Loop–Helix Superfamily Members Reveals Organization and Chilling-Responsive Patterns in Cabbage (Brassica oleracea var. capitata L.)
Cited by: 8
Author(s): Shibo Xi, Wei Zhang, Fangwei Yu, Shenyun Wang, Jianbin Li, Jun Tang, Zhigang Dai
Software Mentions: 1
Published: almost 7 years ago

10.1080/15592294.2020.1767372

Neuronal Lhx1 expression is regulated by DNMT1-dependent modulation of histone marks
Cited by: 15
Author(s): Judit Symmank, Cathrin Bayer, Julia Reichard, Daniel Pensold, Geraldine Zimmer-Bensch
Software Mentions: 1
Published: about 6 years ago

10.1186/s13072-016-0109-x

MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones
Cited by: 38
Author(s): Sara El Kennani, Annie Adrait, Alexey K. Shaytan, Saadi Khochbin, Christophe Bruley, Anna R. Panchenko, David Landsman, Delphine Pflieger, Jérôme Govin
Software Mentions: 1
Published: over 9 years ago

10.3389/fcell.2020.00625

The Dysregulation and Prognostic Analysis of STRIPAK Complex Across Cancers
Cited by: 8
Author(s): Ruiling Xie, Feng Wen, Yong Qin
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.6455

Amorphous silica nanoparticles induce tumorigenesis via regulating ATP5H/SOD1-related oxidative stress, oxidative phosphorylation and EIF4G2/PABPC1-associated translational initiation
Cited by: 5
Author(s): Dongli Xie, Yang Zhou, Xiaogang Luo
Software Mentions: 1
Published: over 7 years ago

10.3390/genes10090701

The Soybean Laccase Gene Family: Evolution and Possible Roles in Plant Defense and Stem Strength Selection
Cited by: 34
Author(s): Quan Wang, Guang Li, Kang‐Cheng Zheng, Xiaobin Zhu, Jingjing Ma, Dongmei Wang, Kun Tang, Xingxing Feng, Jiantian Leng, Hui Yu, Suxin Yang
Software Mentions: 1
Published: almost 7 years ago

10.3390/genes10070527

Genome-Wide Identification and Expression Analysis of the Metacaspase Gene Family in Gossypium Species
Cited by: 9
Author(s): Senmiao Fan, Àiyīng Liú, Zhen Zhang, Xianyan Zou, Xiao Jiang, Jinyong Huang, Liqiang Fan, Zhibin Zhang, Xiǎoyīng Dèng, Qún Gě, Wànkuí Gǒng, Jùnwén Lǐ, Jǔwǔ Gōng, Yùzhēn Shí, Kang Lei, Shuya Zhang, Tingting Jia, Lipeng Zhang, Yǒulù Yuán, Hǎihóng Shāng
Software Mentions: 1
Published: about 7 years ago

10.3390/genes7120111

Genome-Wide Survey Reveals Transcriptional Differences Underlying the Contrasting Trichome Phenotypes of Two Sister Desert Poplars
Cited by: 8
Author(s): Jianchao Ma, Xiaodong He, Xiaotao Bai, Zhimin Niu, Bingbing Duan, Ningning Chen, Xuemin Shao, Dongshi Wan
Software Mentions: 1
Published: over 9 years ago

10.3390/genes7040012

De Novo Transcriptome Sequencing of Desert Herbaceous Achnatherum splendens (Achnatherum) Seedlings and Identification of Salt Tolerance Genes
Cited by: 19
Author(s): Jiangtao Liu, Yuelong Zhou, Changxin Luo, Yun Xiang, Lizhe An
Software Mentions: 1
Published: over 10 years ago

10.3389/fnmol.2021.620593

Severe Spinal Cord Injury in Rats Induces Chronic Changes in the Spinal Cord and Cerebral Cortex Metabolism, Adjusted by Thiamine That Improves Locomotor Performance
Cited by: 14
Author(s): Alexandra Boyko, Polina Tsepkova, Vasily A. Aleshin, Artem V. Artiukhov, Garik Mkrtchyan, Alexander L. Ksenofontov, L. A. Baratova, S. I. Ryabov, А. В. Граф, Victoria I. Bunik
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.120.401880

High-Throughput Identification of Nuclear Envelope Protein Interactions inSchizosaccharomyces pombeUsing an Arrayed Membrane Yeast-Two Hybrid Library
Cited by: 7
Author(s): Joseph M. Varberg, Jennifer M. Gardner, Scott McCroskey, Snehabala Saravanan, W. David Bradford, Sue L. Jaspersen
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.117.1129

Differential Expression of miRNAs in the Respiratory Tree of the Sea Cucumber Apostichopus japonicus Under Hypoxia Stress
Cited by: 20
Author(s): Da Huo, Lina Sun, Xiaoni Li, Xiaoshang Ru, Shilin Liu, Libin Zhang, Lili Xing, Hongsheng Yang
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-021-94831-z

Transcriptome profiling reveals potential genes involved in browning of fresh-cut eggplant (Solanum melongena L.)
Cited by: 6
Author(s): Xiaohui Liu, Aidong Zhang, Jie Zhao, Jing Shang, Zongwen Zhu, Xuexia Wu, Dingshi Zha
Software Mentions: 1
Published: about 5 years ago

10.1002/mgg3.1404

Development of an immune‐related prognostic model for pediatric acute lymphoblastic leukemia patients
Cited by: 3
Author(s): Xi Quan, Nan Zhang, Ying Chen, Hanqing Zeng, Junming Deng
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2021.628538

Comparative Genomic Analysis of the Foodborne Pathogen Burkholderia gladioli pv. cocovenenans Harboring a Bongkrekic Acid Biosynthesis Gene Cluster
Cited by: 5
Author(s): Zong–Gen Peng, Tania Dottorini, Yue Hu, Menghan Li, Shuling Yan, Séamus Fanning, Michelle Baker, Jin Xu, Fengqin Li
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-020-6715-9

Genome-wide analysis of the citrus B3 superfamily and their association with somatic embryogenesis
Cited by: 10
Author(s): Zheng Liu, Xiao Xia Ge, Xiao Meng Wu, Qiang Xu, Ross G. Atkinson, Guo Wen
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0250075

Gut microbiota of endangered crested ibis: Establishment, diversity, and association with reproductive output
Cited by: 8
Author(s): Jian Ran, Qiu‐Hong Wan, Sheng‐Guo Fang
Software Mentions: 1
Published: over 5 years ago

10.1155/2021/2649123

Identification of a Transcription Factor Signature That Can Predict Breast Cancer Survival
Cited by: 4
Author(s): Chi Fan, Jianshi Du, Liu Ning
Software Mentions: 1
Published: over 5 years ago

10.1042/BSR20181434

MicroRNA-140-5p inhibits cell proliferation, migration and promotes cell apoptosis in gastric cancer through the negative regulation of THY1-mediated Notch signaling
Cited by: 20
Author(s): Keng‐Liang Wu, Jun Zhang, Chao Lin, Zhigang Jie
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-020-75853-5

Glucocorticoid-dependent transcription in skin requires epidermal expression of the glucocorticoid receptor and is modulated by the mineralocorticoid receptor
Cited by: 3
Author(s): Lisa M. Sevilla, Judit Bigas, Álvaro Chiner‐Oms, Iñaki Comas, Vicente Sentandreu, Paloma Pérez
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2020.00138

Formation of a Mixed-Species Biofilm Is a Survival Strategy for Unculturable Lactic Acid Bacteria and Saccharomyces cerevisiae in Daqu, a Chinese Traditional Fermentation Starter
Cited by: 40
Author(s): Yu Fan, Xiaoning Huang, Jing Yu Chen, Bei‐Zhong Han
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.00792

Metabolic Insights Into Infochemicals Induced Colony Formation and Flocculation in Scenedesmus subspicatus Unraveled by Quantitative Proteomics
Cited by: 10
Author(s): Sebastiana Roccuzzo, Narciso Couto, Esther Karunakaran, Rahul Vijay Kapoore, Thomas O. Butler, Joy Mukherjee, Erika M Hansson, Andrew P. Beckerman, Jagroop Pandhal
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-018-4861-0

Mixed evolutionary origins of endogenous biomass-depolymerizing enzymes in animals
Cited by: 6
Author(s): Wai Hoong Chang, Alvina G. Lai
Software Mentions: 1
Published: about 8 years ago

10.1038/s41419-021-03856-9

TRPM2 promotes pancreatic cancer by PKC/MAPK pathway
Cited by: 25
Author(s): Rui Lin, Xiao Bao, Hui Wang, Sibo Zhu, Zhongyan Liu, Quanning Chen, Kaixing Ai, Baomin Shi
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-018-5078-y

Bacterial endosymbiont Cardinium cSfur genome sequence provides insights for understanding the symbiotic relationship in Sogatella furcifera host
Cited by: 29
Author(s): Zhen Zeng, Yating Fu, Dongyang Guo, Yuxuan Wu, Olugbenga Emmanuel Ajayi, Qingfa Wu
Software Mentions: 1
Published: almost 8 years ago

10.1002/cam4.1379

Chemotherapy and terminal skeletal muscle differentiation in WT1- mutant Wilms tumors
Cited by: 10
Author(s): Brigitte Royer‐Pokora, Manfred Beier, Artur Brandt, Constanze Duhme, Maike Busch, Carmen de Torres, Hans-Dieter Royer, Jaume Mora
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.01533

A Systems-Wide Analysis of Proteolytic and Lipolytic Pathways Uncovers The Flavor-Forming Potential of The Gram-Positive Bacterium Macrococcus caseolyticus subsp. caseolyticus
Cited by: 19
Author(s): Shahneela Mazhar, Kieran N. Kilcawley, Colin Hill, Olivia McAuliffe
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-76497-1

NLRP3 inflammasome deficiency attenuates metabolic disturbances involving alterations in the gut microbial profile in mice exposed to high fat diet
Cited by: 20
Author(s): Marina Sokolova, Kuan Yang, Simen Hyll Hansen, Mieke C. Louwe, Martin Kummen, Johannes Espolin Roksund Hov, Ivar Sjaastad, Rolf K. Berge, Bente Halvorsen, Pål Aukrust, Arne Yndestad, Trine Ranheim
Software Mentions: 1
Published: over 5 years ago

10.1002/cti2.1105

Prominent immune signatures of T cells are specifically associated with indolent B‐cell lymphoproliferative disorders and predict prognosis
Cited by: 3
Author(s): Shuhua Yi, Yu Zhang, Wei Xiong, Weiwei Chen, Zhaohua Hou, Yang Yang, Yuting Yan, Yunbo Wei, Rui Cui, Huijun Wang, Zhen Yu, Heng Li, Zengjun Li, Wei Liu, Rui Lv, Tingyu Wang, Kun Ru, Dehui Zou, Minglei Shu, Lugui Qiu, Di Yu
Software Mentions: 1
Published: over 6 years ago

10.1016/j.dib.2020.105179

Proteome data to explore the axolotl limb regeneration capacity at neotenic and metamorphic stages
Cited by: 2
Author(s): Turan Demircan, Mustafa Sibai, Ebru Altuntaş
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-78721-4

Phenotypic and genetic characterization of differential galacto-oligosaccharide utilization in Lactobacillus plantarum
Cited by: 11
Author(s): Jori Führen, Markus Schwalbe, Lucía Peralta-Marzal, Christiane Rösch, Henk A. Schols, Michiel Kleerebezem
Software Mentions: 1
Published: over 5 years ago

10.1042/BSR20190303

Identification of exosomal miR-455-5p and miR-1255a as therapeutic targets for breast cancer
Cited by: 19
Author(s): Ying Xin, Xueqiang Wang, Kexin Meng, Chao Ni, Zhenye Lv, Dandan Guan
Software Mentions: 1
Published: over 6 years ago

10.1002/mbo3.1236

Effect of the skincare product on facial skin microbial structure and biophysical parameters: A pilot study
Cited by: 4
Author(s): Bo Kyoung Hwang, Sado Lee, Joonoh Myoung, Seung Jin Hwang, Jun Man Lim, Eui Taek Jeong, Sun Gyoo Park, Sung Hun Youn
Software Mentions: 1
Published: almost 5 years ago

10.3389/fimmu.2019.03055

Avian Pathogenic Escherichia coli (APEC) Strain-Dependent Immunomodulation of Respiratory Granulocytes and Mononuclear Phagocytes in CSF1R-Reporter Transgenic Chickens
Cited by: 33
Author(s): Andreas Alber, Katrina M. Morris, Karen Bryson, Kate Sutton, Melissa S. Monson, Cosmin Chintoan-Uta, Dominika Borowska, Susan J. Lamont, Catherine Schouler, Pete Kaiser, Mark P. Stevens, Lonneke Vervelde
Software Mentions: 1
Published: over 6 years ago

Projects: cran: pheatmap

Science Score: 75/100

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Papers Mentioning pheatmap 2,572