cran: pheatmap | Projects | Ecosyste.ms: Papers

10.1186/s40246-021-00303-w

Screening of disease-related biomarkers related to neuropathic pain (NP) after spinal cord injury (SCI)
Cited by: 11
Author(s): Jia Zhao, Yang Li, Li-Min Huang, Zinan Li
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41419-019-2177-x

Vitamin D promotes the cisplatin sensitivity of oral squamous cell carcinoma by inhibiting LCN2-modulated NF-κB pathway activation through RPS3
Cited by: 46
Author(s): Zheng‐Ming Huang, Yin Zhang, Haigang Li, Yufeng Zhou, Qianyu Zhang, Rui Chen, Tingting Jin, Kaishun Hu, Shihao Li, Yan Wang, Wei‐liang Chen, Zhiquan Huang
Software Mentions: 2
Published: almost 5 years ago

10.3389/fphar.2021.643857

Xanthohumol ameliorates Diet-Induced Liver Dysfunction via Farnesoid X Receptor-Dependent and Independent Signaling
Cited by: 17
Author(s): Ines L. Paraiso, Trac D. Tran, Armando Alcázar Magaña, Payel Kundu, Jaewoo Choi, Claudia S. Maier, Gerd Bobe, Jacob Raber, Chrissa Kioussi, Jan F. Stevens
Software Mentions: 2
Published: over 3 years ago

10.1093/humrep/dez139

Tissue stiffness at the human maternal–fetal interface
Cited by: 53
Author(s): Yassen Abbas, Alejandro Carnicer‐Lombarte, Lucy Gardner, Jake Thomas, Jan J. Brosens, Ashley Moffett, Andrew Sharkey, Kristian Franze, Graham J. Burton, Michelle L. Oyen
Software Mentions: 2
Published: about 5 years ago

10.1038/s41396-017-0002-z

Metabolic versatility of small archaea Micrarchaeota and Parvarchaeota
Cited by: 82
Author(s): Lin-Xing Chen, Celia Méndez–García, Nina Dombrowski, Luis E. Servín-Garcidueñas, Emiley A. Eloe‐Fadrosh, Fang Bao, Zhen Luo, Sha Tan, Xiao Zhi, Zheng-Shuang Hua, Esperanza Martı́nez-Romero, Tanja Woyke, Li Huang, Jesús Sánchez, A Peláez, Manuel Ferrer, Brett J. Baker, W. S. Shu
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12864-020-07058-z

Skeletal muscle and cardiac transcriptomics of a regionally endothermic fish, the Pacific bluefin tuna, Thunnus orientalis
Cited by: 2
Author(s): Adam Ciezarek, Luke D. Gardner, Vincent Savolainen, Barbara A. Block
Software Mentions: 2
Published: about 4 years ago

10.1186/s12864-019-5600-x

Genomic sequence analysis reveals diversity of Australian Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli
Cited by: 14
Author(s): R. Roach, Rachel Mann, Cherie Gambley, Toni A. Chapman, R. G. Shivas, Brendan Rodoni
Software Mentions: 2
Published: over 5 years ago

10.1038/s41396-020-00817-6

Anaerobic bacterial degradation of protein and lipid macromolecules in subarctic marine sediment
Cited by: 33
Author(s): Claus Pelikan, Kenneth Wasmund, Clemens Glombitza, Bela Hausmann, Craig W. Herbold, Mathias Flieder, Alexander Loy
Software Mentions: 2
Published: about 4 years ago

10.3389/fphar.2020.00522

The Effect of Simvastatin on Gut Microbiota and Lipid Metabolism in Hyperlipidemic Rats Induced by a High-Fat Diet
Cited by: 22
Author(s): Qing Zhang, Fan Xia, Yong Rui, Yuqiong Hu, Tingting Zheng, Rui Shi, Wenjian Cheng, Xu-Cong Lv, Lijiao Chen, Liang Peng
Software Mentions: 2
Published: over 4 years ago

10.1038/s41396-020-00828-3

Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions
Cited by: 49
Author(s): Barbara Bayer, Mak A. Saito, Matthew R. McIlvin, Sebastian Lücker, Dawn M. Moran, Thomas S. Lankiewicz, Chris L. Dupont, Alyson E. Santoro
Software Mentions: 2
Published: about 4 years ago

10.18632/aging.103028

HOTAIR drives autophagy in midbrain dopaminergic neurons in the substantia nigra compacta in a mouse model of Parkinson’s disease by elevating NPTX2 <i>via</i> miR-221-3p binding
Cited by: 27
Author(s): Yue Lang, Yu Liu, Haiyang Yu, Lu-Lu Lin, Xingchi Chen, Sainan Wang, Zhang Hui
Software Mentions: 2
Published: over 4 years ago

10.1186/s12864-017-4366-2

Comparative transcriptome and proteome profiling of two Citrus sinensis cultivars during fruit development and ripening
Cited by: 38
Author(s): Jianhui Wang, Jianjun Li, Keling Chen, Hongwen Li, Jian He, Bin Guan, Li He
Software Mentions: 2
Published: about 7 years ago

10.1155/2020/5925126

Metabonomic-Transcriptome Integration Analysis on Osteoarthritis and Rheumatoid Arthritis
Cited by: 6
Author(s): Ningyang Gao, Ding Li, Jian Pang, Yuxin Zheng, Yuelong Cao, Hongsheng Zhan, Yue Shi
Software Mentions: 2
Published: almost 5 years ago

10.1007/s00299-020-02520-4

Wheat PP2C-a10 regulates seed germination and drought tolerance in transgenic Arabidopsis
Cited by: 31
Author(s): Xiao‐Lan Yu, Jiapeng Han, Li Li, Qian Zhang, Guangxiao Yang, Guoqing He
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12864-020-6639-4

Endogenous circadian time genes expressions in the liver of mice under constant darkness
Cited by: 23
Author(s): Huan Li, Shiyao Zhang, Wenxiang Zhang, Siyu Chen, Anjara Rabearivony, Yujie Shi, Jie Liu, Christopher J. Corton, Chang Liu
Software Mentions: 2
Published: over 4 years ago

10.1016/j.immuni.2020.07.004

Flexible Usage and Interconnectivity of Diverse Cell Death Pathways Protect against Intracellular Infection
Cited by: 83
Author(s): Marcel Doerflinger, Yexuan Deng, Paul G. Whitney, Ranja Salvamoser, Sven Engel, Andrew J. Kueh, Lin Tai, Annabell Bachem, Elise Gressier, Niall Geoghegan, Stephen Wilcox, Kelly L. Rogers, Alexandra L. Garnham, Michael A. Dengler, Stefanie Bader, Gregor Ebert, Jaclyn S. Pearson, Dominic De Nardo, Nancy Wang, Chenying Yang, Milton Pereira, Clare E. Bryant, Richard A. Strugnell, James E. Vince, Marc Pellegrini, Andreas Strasser, Sammy Bedoui, Marco J. Herold
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2020.00347

Bacterial Community Selection of Russula griseocarnosa Mycosphere Soil
Cited by: 9
Author(s): Fei Yu, Jiankun Liang, Jie Song, Shengkun Wang, Junkun Lu
Software Mentions: 2
Published: over 4 years ago

10.3390/molecules22122126

Biochemical, Physiological and Transcriptomic Comparison between Burley and Flue-Cured Tobacco Seedlings in Relation to Carbohydrates and Nitrate Content
Cited by: 17
Author(s): Yafei Li, Huijuan Yang, Dong Chil Chang, Shuzhen Lin, Yuqing Feng, Jingjing Li, Hongzhi Shi
Software Mentions: 2
Published: about 7 years ago

10.1016/j.immuni.2020.10.020

Antagonistic Inflammatory Phenotypes Dictate Tumor Fate and Response to Immune Checkpoint Blockade
Cited by: 113
Author(s): Eduardo Bonavita, Christian P. Bromley, Gustav Jonsson, Victoria S. Pelly, Sudhakar Sahoo, Katherine Walwyn-Brown, Sofia Mensurado, Agrin Moeini, Eimear Flanagan, Charlotte R. Bell, Shih‐Chieh Chiang, C.P. Chikkanna-Gowda, Neil C. Rogers, Bruno Silva‐Santos, Sébastien Jaillon, Alberto Mantovani, Caetano Reis e Sousa, Nadia Guerra, Daniel M. Davis, Santiago Zelenay
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2019.03104

Genomic Analysis of Putative Virulence Factors Affecting Cytotoxicity of Cronobacter
Cited by: 8
Author(s): Jinghua Cui, Jinrui Hu, Xin Du, Chao Yan, Guanhua Xue, Shaoli Li, Zhigang Cui, Hua Huang, Jing Yuan
Software Mentions: 2
Published: almost 5 years ago

10.3389/fimmu.2019.00870

The Axial Organ and the Pharynx Are Sites of Hematopoiesis in the Sea Urchin
Cited by: 23
Author(s): Preethi Golconda, Katherine M. Buckley, Caroline R. Reynolds, Jennifer P. Romanello, L. Courtney Smith
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2018.00126

Genome-Wide Identification and Classification of Soybean C2H2 Zinc Finger Proteins and Their Expression Analysis in Legume-Rhizobium Symbiosis
Cited by: 35
Author(s): Songli Yuan, Xiangyong Li, Rong Li, Lei Wang, Chanjuan Zhang, Limiao Chen, Qingnan Hao, Xiaojuan Zhang, Haifeng Chen, Shan Zhang, Zengling Yang, Shuilian Chen, Dandan Qiu, Danxia Ke, Xinan Zhou
Software Mentions: 2
Published: almost 7 years ago

10.3389/fimmu.2021.710608

Traumatic Brain Injury Induces cGAS Activation and Type I Interferon Signaling in Aged Mice
Cited by: 29
Author(s): James W. Barrett, Susan M. Knoblach, Surajit Bhattacharya, Heather Gordish‐Dressman, Bogdan A. Stoica, David J. Loane
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2018.01274

5-Aminosalicylic Acid Alters the Gut Bacterial Microbiota in Patients With Ulcerative Colitis
Cited by: 89
Author(s): Jianming Xu, Ning Chen, Zhe Wu, Yang Song, Yifan Zhang, Na Wu, Feng Zhang, Xinhua Ren, Yulan Liu
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2020.01470

An RNA-seq Based Machine Learning Approach Identifies Latent Tuberculosis Patients With an Active Tuberculosis Profile
Cited by: 23
Author(s): Olivia Estévez, Luis Anibarro, Elina Garet, Ángeles Pallarés, Laura Barcia, Laura Calviño, Cremildo Maueia, Tufária Mussá, Florentino Fdez-Riverola, Daniel Glez-Peña, Miguel Reboiro-Jato, Hugo López-Fernández, Nuno A. Fonseca, Rajko Reljić, África González-Fernández
Software Mentions: 2
Published: over 4 years ago

10.3390/molecules26113172

Modification of Sensory Expression of 3-Isobutyl-2-methoxypyrazine in Wines through Blending Technique
Cited by: 6
Author(s): Mengqi Ling, Yu Zhou, Yi-Bin Lan, Chi Cheng, Guangfeng Wu, Chang‐Qing Duan, Ying Shi
Software Mentions: 2
Published: over 3 years ago

10.3389/fphar.2021.693982

Resveratrol Alleviates Dextran Sulfate Sodium-Induced Acute Ulcerative Colitis in Mice by Mediating PI3K/Akt/VEGFA Pathway
Cited by: 12
Author(s): Fang Zhu, Jujia Zheng, Fang Xu, Yiyuan Xi, Jun Chen, Xiaorong Xu
Software Mentions: 2
Published: over 3 years ago

10.1038/s41419-021-03816-3

Proteomics of extracellular vesicles in plasma reveals the characteristics and residual traces of COVID-19 patients without underlying diseases after 3 months of recovery
Cited by: 20
Author(s): Kaimin Mao, Qi Tan, Yanling Ma, Sufei Wang, Hua Zhong, Yuhan Liao, Qi Huang, Wenjing Xiao, Hui Xia, Xingyi Tan, Ping Luo, Jing Xu, Danling Long, Yang Jin
Software Mentions: 2
Published: over 3 years ago

10.1128/IAI.00311-19

Identification of Potential Cerebrospinal Fluid Biomarkers To Discriminate between Infection and Sterile Inflammation in a Rat Model of Staphylococcus epidermidis Catheter Infection
Cited by: 5
Author(s): Gwenn Skar, Matthew Beaver, Amy Aldrich, Dragana Lagundžin, Ishwor Thapa, Nicholas T. Woods, Hesham Ali, Jessica Snowden, Tammy Kielian
Software Mentions: 2
Published: over 5 years ago

10.1186/s12885-020-6515-2

Comprehensive profiling of circular RNA expressions reveals potential diagnostic and prognostic biomarkers in multiple myeloma
Cited by: 44
Author(s): Fan Zhou, Dongjiao Wang, Wei Wei, Haimin Chen, Haotian Shi, Nina Zhou, Lixia Wu, Rong Peng
Software Mentions: 2
Published: almost 5 years ago

10.3389/fgene.2020.00382

Expression Profiling and Cell Type Classification Analysis in Periodontitis Reveal Dysregulation of Multiple lncRNAs in Plasma Cells
Cited by: 16
Author(s): Donglei Wu, Peng Zhou, Fengdi Cao, Zhengshen Lin, Defeng Liang, Xiong Zhou
Software Mentions: 2
Published: over 4 years ago

10.3390/molecules26061644

Anti-Cancer Effects of Carnosine—A Dipeptide Molecule
Cited by: 13
Author(s): Monica D. Prakash, Sarah Fraser, Jennifer C. Boer, Magdalena Plebanski, Barbora de Courten, Vasso Apostolopoulos
Software Mentions: 2
Published: over 3 years ago

10.3389/fgene.2019.00316

New Insights of Salicylic Acid Into Stamen Abortion of Female Flowers in Tung Tree (Vernicia fordii)
Cited by: 25
Author(s): Meilan Liu, Wenying Li, Guang Zhao, Xiaoming Fan, Hongxu Long, Yanru Fan, Ming-Wang Shi, Xiaofeng Tan, Lin Zhang
Software Mentions: 2
Published: over 5 years ago

10.1186/s13046-019-1103-5

HOXD-AS1 promotes the epithelial to mesenchymal transition of ovarian cancer cells by regulating miR-186-5p and PIK3R3
Cited by: 75
Author(s): Shanshan Dong, Ranran Wang, Hui Wang, Qi Ding, Xiao Yan Zhou, Jing Wang, Keqiang Zhang, Ying Long, Shan Lu, Tian Hong, Huayi Ren, Kee H. Wong, Xiaowu Sheng, Yu Wang, Yong Zeng
Software Mentions: 2
Published: almost 6 years ago

10.1242/dmm.033316

Impaired β-cell glucokinase as an underlying mechanism in diet-induced diabetes
Cited by: 17
Author(s): Brian Lu, Kiran Kurmi, Miguel Munoz-Gomez, Egon J. Jacobus, Jason M. Tonne, Kuntol Rakshit, Taro Hitosugi, Yogish C. Kudva, Aleksey V. Matveyenko, Yasuhiro Ikeda
Software Mentions: 2
Published: over 6 years ago

10.3389/fpls.2021.667929

Genome-Wide Identification and Evolutionary Analysis of Gossypium Tubby-Like Protein (TLP) Gene Family and Expression Analyses During Salt and Drought Stress
Cited by: 13
Author(s): Nasreen Bano, Shafquat Fakhrah, Chandra Sekhar Mohanty, Sumit K. Bag
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2017.00484

Carbohydrate Staple Food Modulates Gut Microbiota of Mongolians in China
Cited by: 21
Author(s): Jing Li, Qiangchuan Hou, Jiachao Zhang, Haiyan Xu, Zhihong Sun, Bilige Menghe, Heping Zhang
Software Mentions: 2
Published: over 7 years ago

10.3389/fpls.2020.00625

Genome-Wide Association Study Reveals the Genetic Architecture of Stripe Rust Resistance at the Adult Plant Stage in Chinese Endemic Wheat
Cited by: 6
Author(s): Jing Li, Yunfeng Jiang, Fangjie Yao, Long Li, Yuqi Wang, Yu Wu, Hao Li, Jirui Wang, Qiantao Jiang, Houyang Kang, Wei Li, Pengfei Qi, Jian Ma, Zhien Pu, Shoufen Dai, Yuming Wei, Youliang Zheng, Guoyue Chen
Software Mentions: 2
Published: over 4 years ago

10.1186/s12864-021-07838-1

Gonadal transcriptomes associated with sex phenotypes provide potential male and female candidate genes of sex determination or early differentiation in Crassostrea gigas, a sequential hermaphrodite mollusc
Cited by: 12
Author(s): Coralie Broquard, Saowaros Suwansa‐ard, Mélanie Lepoittevin, Lionel Degrémont, Jean‐Baptiste Lamy, Benjamín Morga, Abigail Elizur, Anne‐Sophie Martinez
Software Mentions: 2
Published: over 3 years ago

10.14814/phy2.13794

TGF beta inhibits HGF, FGF7, and FGF10 expression in normal and IPF lung fibroblasts
Cited by: 16
Author(s): Kelly A. Correll, Karen E. Edeen, Elizabeth F. Redente, Rachel L. Zemans, Benjamin Edelman, Thomas Danhorn, Douglas Curran‐Everett, Amanda Mikels‐Vigdal, Robert J. Mason
Software Mentions: 2
Published: over 6 years ago

10.3389/fgene.2021.706706

Barrett’s Epithelium to Esophageal Adenocarcinoma: Is There a “Point of No Return”?
Cited by: 4
Author(s): Anshuman Panda, Mi Ryung Shin, Christopher Cheng, Manisha Bajpai
Software Mentions: 2
Published: about 3 years ago

10.3389/fmicb.2019.02629

Transcriptomic Profile and Sexual Reproduction-Relevant Genes of Alexandrium minutum in Response to Nutritional Deficiency
Cited by: 12
Author(s): Fan Qiang Meng, Jun Song, Jin Zhou, Zhong Hua Cai
Software Mentions: 2
Published: about 5 years ago

10.1155/2021/5536330

The Function and Prognostic Value of RNA-Binding Proteins in Colorectal Adenocarcinoma Were Analyzed Based on Bioinformatics of Smart Medical Big Data
Cited by: 1
Author(s): Haoran Zhao, Peng Wang, Haishi Liu, Yueyang Li, Qian Luo, Man Li, Yubao Zhang, Zengfu Song
Software Mentions: 2
Published: over 3 years ago

10.3389/fgene.2021.627092

Comprehensive Analysis of Cell Population Dynamics and Related Core Genes During Vitiligo Development
Cited by: 6
Author(s): Jingzhan Zhang, Shi-Rong Yu, Wen Hu, Man Wang, Dilinuer Abudoureyimu, Dong Luo, Tingting Li, Linglong Long, Hui Zeng, Chao Cheng, Zixian Lei, Jianan Teng, Xiaojing Kang
Software Mentions: 2
Published: almost 4 years ago

10.3389/fgene.2020.591515

Identification of Serum Circulating MicroRNAs as Novel Diagnostic Biomarkers of Gastric Cancer
Cited by: 15
Author(s): Yunjin Yao, Yongfeng Ding, Yuntong Bai, Quan Zhou, Hyun Lee, Xiawei Li, Lisong Teng
Software Mentions: 2
Published: almost 4 years ago

10.1111/mec.15734

Environmental DNA metabarcoding of cow dung reveals taxonomic and functional diversity of invertebrate assemblages
Cited by: 16
Author(s): Eva Egelyng Sigsgaard, Kent Olsen, Morten D. D. Hansen, Ole Ingemann Hansen, Toke T. Høye, Jens‐Christian Svenning, Philip Francis Thomsen
Software Mentions: 2
Published: almost 4 years ago

10.3389/fgene.2020.596150

Expression Partitioning of Duplicate Genes at Single Cell Resolution in Arabidopsis Roots
Cited by: 19
Author(s): Jeremy E. Coate, Andrew Farmer, John Schiefelbein, Jeff J. Doyle
Software Mentions: 2
Published: about 4 years ago

10.1016/j.mcpro.2021.100126

Proteomics, Lipidomics, Metabolomics, and 16S DNA Sequencing of Dental Plaque From Patients With Diabetes and Periodontal Disease
Cited by: 15
Author(s): Katherine A. Overmyer, Timothy W. Rhoads, Anna E. Merrill, Zhan Ye, Michael S. Westphall, Amit Acharya, Sanjay Kumar Shukla, Joshua J. Coon
Software Mentions: 2
Published: almost 4 years ago

10.1186/s13578-021-00665-7

Effects of low lead exposure on sperm quality and sperm DNA methylation in adult men
Cited by: 6
Author(s): Tiancheng Zhang, Yan Fei Ru, Bin Wu, Haiyan Dong, Chen Liang, Jing Zheng, Jianhui Li, Xin Wang, Zhikai Wang, Xuemei Wang, Xiaorong Shen, Jun Wu, Jun Qian, Maohua Miao, Yihua Gu, Huijuan Shi
Software Mentions: 2
Published: over 3 years ago

10.3389/fgene.2019.00595

Genomic and Bioinformatic Characterization of Mouse Mast Cells (P815) Upon Different Influenza A Virus (H1N1, H5N1, and H7N2) Infections
Cited by: 10
Author(s): Caiyun Huo, Hongping Wu, Jin Xiao, Di Meng, Shumei Zou, Ming Wang, Qi Peng, Haiyan Tian, Yanxin Hu
Software Mentions: 2
Published: over 5 years ago

10.3389/fgene.2020.00990

Three Genes Predict Prognosis in Microenvironment of Ovarian Cancer
Cited by: 6
Author(s): Ya Guo, Ya Li Wang, Su Wang, Yang Peng, Jing Chen, Heng Luo
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2019.00152

Evolution and Comprehensive Analysis of DNaseI Hypersensitive Sites in Regulatory Regions of Primate Brain-Related Genes
Cited by: 4
Author(s): Yueer Lu, Xiao Wang, Hang Yu, Jianlin Li, Zhiqiang Jiang, Bangwei Chen, Yueqi Lu, Wei Wang, Chongyin Han, Ying Ouyang, Lizhen Huang, Chunbo Chen, Weidong Tian, Fei Ling
Software Mentions: 2
Published: over 5 years ago

10.1038/s42003-021-01901-z

Inside-out chicken enteroids with leukocyte component as a model to study host–pathogen interactions
Cited by: 38
Author(s): Tessa Nash, Katrina M. Morris, Neil A. Mabbott, Lonneke Vervelde
Software Mentions: 2
Published: over 3 years ago

10.3389/fmolb.2021.683240

Immunological Significance of Prognostic DNA Methylation Sites in Hepatocellular Carcinoma
Cited by: 12
Author(s): Qianhui Xu, Yuanbo Hu, Shaohuai Chen, Yulun Zhu, Siwei Li, Feng Shen, Yifan Guo, Tao Sun, Xiaoyu Chen, Jinpeng Jiang, Wen Huang
Software Mentions: 2
Published: over 3 years ago

10.3389/fmolb.2021.673044

Altered Glycosylation in the Aging Heart
Cited by: 6
Author(s): Patricia Franzka, Lynn Krüger, Mona K Schurig, Maja Olecka, Steve Hoffmann, Véronique Blanchard, Christian A. Hübner
Software Mentions: 2
Published: over 3 years ago

10.3389/fgene.2021.696840

Whole-Genome Methylation Analysis Revealed ART-Specific DNA Methylation Pattern of Neuro- and Immune-System Pathways in Chinese Human Neonates
Cited by: 4
Author(s): Zongzhi Liu, Wei Chen, Zilong Zhang, Junyun Wang, Yikun Yang, Hai Luo, Wei Yuan, Jie Qiao, Yingli Sun
Software Mentions: 2
Published: about 3 years ago

10.3389/fgene.2019.01187

Identification of Microenvironment-Related Prognostic Genes in Bladder Cancer Based on Gene Expression Profile
Cited by: 31
Author(s): Yongxiang Luo, Guohua Zeng, Song Wu
Software Mentions: 2
Published: about 5 years ago

10.3390/microorganisms9081767

Different Responses of Microbiota across Intestinal Tract to Enterococcus faecium HDRsEf1 and Their Correlation with Inflammation in Weaned Piglets
Cited by: 7
Author(s): Junlan Zhou, Ji Luo, Sen Yang, Qiling Xiao, Xiliang Wang, Zutao Zhou, Yufei Xiao, Deshi Shi
Software Mentions: 2
Published: over 3 years ago

10.3389/fgene.2020.605378

Increased Expression of TICRR Predicts Poor Clinical Outcomes: A Potential Therapeutic Target for Papillary Renal Cell Carcinoma
Cited by: 8
Author(s): Shuang Xia, Ye Lin, Jiaqiong Lin, Xiaoyong Li, Xuexian Tan, Zhemin Huang
Software Mentions: 2
Published: almost 4 years ago

10.3389/fgene.2020.583785

Transcriptomic Study for Identification of Major Nitrogen Stress Responsive Genes in Australian Bread Wheat Cultivars
Cited by: 28
Author(s): Nigarin Sultana, Shahidul Islam, Angéla Juhász, Rongchang Yang, Maoyun She, Zaid Alhabbar, Jingjuan Zhang, Wujun Ma
Software Mentions: 2
Published: about 4 years ago

10.3389/fnmol.2019.00196

Differential Expression Profiles and Functional Prediction of Circular RNAs and Long Non-coding RNAs in the Hippocampus of Nrf2-Knockout Mice
Cited by: 15
Author(s): Runjiao Zhang, Yan Li, Qing Liu, Yanjing Gao, Juan Du, Jun Ma, Shao-Guang Sun, Lei Wang
Software Mentions: 2
Published: over 5 years ago

10.3389/fgene.2021.615340

Functional Network of the Long Non-coding RNA Growth Arrest-Specific Transcript 5 and Its Interacting Proteins in Senescence
Cited by: 3
Author(s): Siqi Wang, Shengwei Ke, Yueming Wu, Duo Zhang, Baowei Liu, Yaohui He, Wen Li, Huawei Mu, Xiaoyuan Song
Software Mentions: 2
Published: over 3 years ago

10.1161/JAHA.120.017091

Unique Transcriptome Signature Distinguishes Patients With Heart Failure With Myopathy
Cited by: 10
Author(s): Talia Caspi, Sam Straw, Chew Weng Cheng, Jack Garnham, Jason L. Scragg, Jessica Smith, Aaron Koshy, Eylem Levelt, Piruthivi Sukumar, John Gierula, David J. Beech, Mark T. Kearney, Richard M Cubbon, Stephen Wheatcroft, Klaus K. Witte, Lee D. Roberts, T. Scott Bowen
Software Mentions: 2
Published: about 4 years ago

10.3390/microorganisms9051027

Bioinformatics Analysis of Oral, Vaginal, and Rectal Microbial Profiles during Pregnancy: A Pilot Study on the Bacterial Co-Residence in Pregnant Women
Cited by: 5
Author(s): Megumi Fudaba, Toshikazu Kamiya, Daisuke Tachibana, Masayasu Koyama, Naoko Ohtani
Software Mentions: 2
Published: over 3 years ago

10.3390/cells10020251

Osteoarthritic Subchondral Bone Release Exosomes That Promote Cartilage Degeneration
Cited by: 26
Author(s): Xiaoxin Wu, Ross Crawford, Yin Xiao, Xinzhan Mao, Indira Prasadam
Software Mentions: 2
Published: almost 4 years ago

10.3389/fendo.2019.00872

Dysregulation of the Mitochondrial Proteome Occurs in Mice Lacking Adiponectin Receptor 1
Cited by: 7
Author(s): Mark E Pepin, Christoph Koentges, Katharina Pfeil, Johannes Gollmer, Sophia Kersting, Sebastian Wiese, Michael M. Hoffmann, Katja E. Odening, Constantin von zur Mühlen, Philipp Diehl, Peter Stachon, Dennis Wolf, Adam R. Wende, Christoph Bode, Andreas Zirlik, Heiko Bugger
Software Mentions: 2
Published: almost 5 years ago

10.3389/fneur.2020.580997

Electroacupuncture Alleviates Mechanical Allodynia of a Rat Model of CRPS-I and Modulates Gene Expression Profiles in Dorsal Root Ganglia
Cited by: 7
Author(s): Jie Wang, Xiaoli Zheng, Boyu Liu, Chengyu Yin, Ruixiang Chen, Xiaojie Li, Yuanyuan Li, Huimin Nie, Danyi Zeng, Xiaofen He, Yongliang Jiang, Jianqiao Fang
Software Mentions: 2
Published: about 4 years ago

10.3389/fendo.2021.700049

Differential Gene Expression and Biological Analyses of Primary Hepatocytes Following D-Chiro-Inositol Supplement
Cited by: 4
Author(s): Feier Cheng, Shaojun Yun, Jianhua Cao, Mingchang Chang, Jiao Meng, Jingyu Liu, Yanfen Cheng, Cuiping Feng
Software Mentions: 2
Published: over 3 years ago

10.3390/microorganisms9091793

The Intestinal Bacterial Community and Functional Potential of Litopenaeus vannamei in the Coastal Areas of China
Cited by: 7
Author(s): Yimeng Cheng, Chaorong Ge, Wei Li, Huaiying Yao
Software Mentions: 2
Published: over 3 years ago

10.3390/microorganisms9061287

Comparative Exoproteome Analysis of Streptococcus suis Human Isolates
Cited by: 0
Author(s): Esther Prados de la Torre, Antonio Rodríguez-Franco, Manuel J. Rodríguez-Ortega
Software Mentions: 2
Published: over 3 years ago

10.3389/fcimb.2021.689707

Constitutive TRIM22 Expression in the Respiratory Tract Confers a Pre-Existing Defence Against Influenza A Virus Infection
Cited by: 4
Author(s): Matthew Charman, Steven McFarlane, Joanna K. Wojtus, Elizabeth Sloan, Rebecca Dewar, Gail Leeming, Mohammed Al-Saadi, Laura Hunter, Miles W. Carroll, James Stewart, Paul Digard, Edward Hutchinson, Chris Boutell
Software Mentions: 2
Published: about 3 years ago

10.3389/fcimb.2019.00246

Variability in Genomic and Virulent Properties of Porphyromonas gingivalis Strains Isolated From Healthy and Severe Chronic Periodontitis Individuals
Cited by: 16
Author(s): Katterinne N. Mendez, Anilei Hoare, Cristopher Soto, Isaac Maximiliano Bugueno, Marcela Olivera, Claudio Meneses, José M. Pérez-Donoso, Eduardo Castro-Nallar, Denisse Bravo
Software Mentions: 2
Published: over 5 years ago

10.3389/fpls.2020.00484

Evolution and Functional Divergence of the Fructokinase Gene Family in Populus
Cited by: 4
Author(s): Weijie Xu, Yiyang Zhao, Sisi Chen, Jianbo Xie, Deqiang Zhang
Software Mentions: 2
Published: over 4 years ago

10.1074/jbc.RA120.015755

Genomic determinants implicated in the glucocorticoid-mediated induction of KLF9 in pulmonary epithelial cells
Cited by: 9
Author(s): Mahmoud Mostafa, Akanksha Bansal, Aubrey N. Michi, Sarah K. Sasse, David Proud, Anthony N. Gerber, Robert Newton
Software Mentions: 2
Published: almost 4 years ago

10.3389/fcimb.2021.659505

Non-Lactobacillus-Dominated Vaginal Microbiota Is Associated With a Tubal Pregnancy in Symptomatic Chinese Women in the Early Stage of Pregnancy: A Nested Case–Control Study
Cited by: 3
Author(s): Xiaofeng Ruan, Yingxuan Zhang, Si Chen, Xiaorong Liu, Fangfang Zhu, Yu‐Ning Huang, Xiaojing Liu, Songping Luo, Gaopi Deng, Jie Gao
Software Mentions: 2
Published: over 3 years ago

10.1186/s40709-020-00116-3

A potential prognostic model based on miRNA expression profile in The Cancer Genome Atlas for bladder cancer patients
Cited by: 3
Author(s): Yan Liu, Dong Zhu, Hong Xing, Yi Hou, Yan Sun
Software Mentions: 2
Published: over 4 years ago

10.3389/fpls.2021.703667

Convergent Epigenetic Mechanisms Avoid Constitutive Expression of Immune Receptor Gene Subsets
Cited by: 11
Author(s): Damián Alejandro Cambiagno, José Roberto Torres, María Elena Alvarez
Software Mentions: 2
Published: about 3 years ago

10.3389/fcell.2021.676364

Role of RNA N6-Methyladenosine Modification in Male Infertility and Genital System Tumors
Cited by: 10
Author(s): Shuai Liu, Yongfeng Lao, Yanan Wang, Rongxin Li, Xuefeng Fang, Yunchang Wang, Xiaolong Gao, Zhong Dong
Software Mentions: 2
Published: over 3 years ago

10.3389/fcell.2021.678665

Exposure to Copper Compromises the Maturational Competency of Porcine Oocytes by Impairing Mitochondrial Function
Cited by: 7
Author(s): Jingyue Chen, Zhaokang Cui, Yawei Qiu, Xingxing Zhang, Fang Chen, Huili Wang, Bo Xiong, Yun Miao, Qian Gao
Software Mentions: 2
Published: over 3 years ago

10.3389/fcell.2020.00199

Molecular Events Controlling Cessation of Trunk Neural Crest Migration and Onset of Differentiation
Cited by: 5
Author(s): Vivian M. Lee, Sergio Hernández, Belle Giang, Chris L. Chabot, Jazmir M. Hernandez, María Elena de Bellard
Software Mentions: 2
Published: over 4 years ago

10.1186/s13578-020-00487-z

Significant transcriptomic changes are associated with differentiation of bone marrow-derived mesenchymal stem cells into neural progenitor-like cells in the presence of bFGF and EGF
Cited by: 19
Author(s): Amir Ali Khan, Tee Jong Huat, Abdullah Al Mutery, Ahmed T. El‐Serafi, Hassen Hadj Kacem, Sallam Hasan Abdallah, Muhammed Faruque Reza, Jafri Malin Abdullah, Hasnan Jaafar
Software Mentions: 2
Published: about 4 years ago

10.1186/s12864-018-4511-6

Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family
Cited by: 65
Author(s): Man Zhang, Qing Liu, Hongbo Shi, Mingliang Guo, Mengnan Chai, Qing-Yu He, Mei Yan, Du Cao, Lihua Zhao, Hanyang Cai, Yuan Qin
Software Mentions: 2
Published: almost 7 years ago

10.3389/fpls.2021.725728

Integrated Genomic Analyses From Low-Depth Sequencing Help Resolve Phylogenetic Incongruence in the Bamboos (Poaceae: Bambusoideae)
Cited by: 3
Author(s): Domitille Chalopin, Lynn G. Clark, William P. Wysocki, Minkyu Park, Melvin R. Duvall, Jeffrey L. Bennetzen
Software Mentions: 2
Published: about 3 years ago

10.1038/s41598-017-03820-8

Tracing the epidemic history of HIV-1 CRF01_AE clusters using near-complete genome sequences
Cited by: 31
Author(s): Xingguang Li, Haizhou Liu, Lu Liu, Yi Feng, Marcia L. Kalish, Simon Y. W. Ho, Yiming Shao
Software Mentions: 2
Published: over 7 years ago

10.3389/fcell.2020.590898

T-Box Transcription Factor 22 Is an Immune Microenvironment-Related Biomarker Associated With the BRAFV600E Mutation in Papillary Thyroid Carcinoma
Cited by: 3
Author(s): Xubin Dong, Jingjing Song, Jing Hu, Cheng Zheng, Xiaohua Zhang, Haiguang Liu
Software Mentions: 2
Published: almost 4 years ago

10.3389/fcell.2021.663207

CircGLIS3 Promotes High-Grade Glioma Invasion via Modulating Ezrin Phosphorylation
Cited by: 16
Author(s): Yan Li, Jiansheng Chen, Zetao Chen, Xiangdong Xu, Jun Weng, Yuxuan Zhang, Yunzhao Mo, Yang Liu, Jihui Wang, Yiquan Ke
Software Mentions: 2
Published: about 3 years ago

10.3389/fcell.2021.708389

Generation of hiPSC-Derived Functional Dopaminergic Neurons in Alginate-Based 3D Culture
Cited by: 9
Author(s): Valentina Gilmozzi, Giovanna Gentile, Diana A Riekschnitz, Michael von Troyer, Alexandros A. Lavdas, Emanuela Kerschbamer, Christian X. Weichenberger, Marcelo D. Rosato-Siri, Simona Casarosa, Luciano Conti, Peter P. Pramstaller, Andrew A. Hicks, Irene Pichler, Alessandra Zanon
Software Mentions: 2
Published: over 3 years ago

10.3389/fpls.2017.00271

Transcriptomic Analysis of Thermally Stressed Symbiodinium Reveals Differential Expression of Stress and Metabolism Genes
Cited by: 72
Author(s): Sarah L. Gierz, Sylvain Forêt, William Leggat
Software Mentions: 2
Published: almost 8 years ago

10.3390/microorganisms9081653

Uncovering the Worldwide Diversity and Evolution of the Virome of the Mosquitoes Aedes aegypti and Aedes albopictus
Cited by: 19
Author(s): Rhys Parry, Maddie E. James, Sassan Asgari
Software Mentions: 2
Published: over 3 years ago

10.3389/fpls.2020.01193

Transcriptome Analysis of Solanum Tuberosum Genotype RH89-039-16 in Response to Chitosan
Cited by: 11
Author(s): Philipp Lemke, Bruno M. Moerschbacher, Ratna Singh
Software Mentions: 2
Published: over 4 years ago

10.3389/fcell.2021.717462

A Novel TCGA-Validated, MiRNA-Based Signature for Prediction of Breast Cancer Prognosis and Survival
Cited by: 8
Author(s): Baoxing Tian, Mengjie Hou, Kun Zhou, Xia Qiu, Yibao Du, Yifan Gu, Xiaoxing Yin, Jie Wang
Software Mentions: 2
Published: about 3 years ago

10.1186/s13046-020-01807-4

Cell surface GRP78 regulates BACE2 via lysosome-dependent manner to maintain mesenchymal phenotype of glioma stem cells
Cited by: 16
Author(s): Zihang Chen, Huizhi Wang, Zongpu Zhang, Jianye Xu, Yanhua Qi, Hao Xue, Zijie Gao, Rongrong Zhao, Shaobo Wang, Shouji Zhang, Wei Qiu, Xing Guo, Gang Li
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-017-10436-5

Microbial communities in peatlands along a chronosequence on the Sanjiang Plain, China
Cited by: 16
Author(s): Xue Zhou, Zhenqing Zhang, Lei Tian, Xiujun Li, Chunjie Tian
Software Mentions: 2
Published: over 7 years ago

10.3389/fcell.2020.580876

Mitochondrial Ca2+ Overload Leads to Mitochondrial Oxidative Stress and Delayed Meiotic Resumption in Mouse Oocytes
Cited by: 18
Author(s): Luyao Zhang, Wang Zichuan, Tengfei Lu, Lin Meng, Yan Luo, Xiangwei Fu, Yunpeng Hou
Software Mentions: 2
Published: almost 4 years ago

10.18632/aging.202663

A novel protein ubiquitination-related five-gene signature predicts overall survival in patients with lung adenocarcinoma
Cited by: 1
Author(s): Ran Xu, Tong Lu, Jun Wang, LinYou Zhang
Software Mentions: 2
Published: over 3 years ago

10.3389/fcell.2021.736994

Microbiomes and Resistomes in Biopsy Tissue and Intestinal Lavage Fluid of Colorectal Cancer
Cited by: 8
Author(s): Yumeng Yuan, Yihuan Chen, Fen Yao, Mi Zeng, Qingdong Xie, Muhammad Shafiq, Sohail M. Noman, Xiaoyang Jiao
Software Mentions: 2
Published: about 3 years ago

10.3389/fonc.2020.556084

LINC01315 Impairs microRNA-211-Dependent DLG3 Downregulation to Inhibit the Development of Oral Squamous Cell Carcinoma
Cited by: 11
Author(s): Fu-Bo Chen, Peng Wu, Rong Zhou, Qixiang Yang, Xu Zhang, Raorao Wang, Shengcai Qi, Xi Yang
Software Mentions: 2
Published: about 4 years ago

10.3389/fcell.2021.726323

Tumor Cell-Derived Exosomal Circ-0072088 Suppresses Migration and Invasion of Hepatic Carcinoma Cells Through Regulating MMP-16
Cited by: 20
Author(s): Ye Lin, Zehao Zheng, Jianxi Wang, Zhen Zhao, Tianyi Peng
Software Mentions: 2
Published: about 3 years ago

10.3390/microorganisms9091796

Metagenomic Analysis of Bacterial Communities in Agricultural Soils from Vietnam with Special Attention to Phosphate Solubilizing Bacteria
Cited by: 16
Author(s): Anna Hegyi, Tran Bao Khuyen Nguyen, Katalin Posta
Software Mentions: 2
Published: over 3 years ago

10.3390/microorganisms8040488

Pectin Degradation is an Important Determinant for Alfalfa Silage Fermentation through the Rescheduling of the Bacterial Community
Cited by: 15
Author(s): Bing Wang, Zhiqiang Sun, Zhu Yu
Software Mentions: 2
Published: over 4 years ago

Projects: cran: pheatmap

Papers Mentioning pheatmap 2,572