Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: pgirmess
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/pgirmess
Spatial Analysis and Data Mining for Field Ecologists
53 versions
Latest release: over 1 year ago
3 dependent packages
6,231 downloads last month
Papers Mentioning pgirmess 148
10.1371/journal.pone.0195643
A snapshot of gut microbiota of an adult urban population from Western region of IndiaCited by: 39
Author(s): Disha Tandon, Mohammed Monzoorul Haque, R Saravanan, Shafiq Shaikh, Pradeep Ram Angia Sriram, Ashok Kumar Dubey, Sharmila S. Mande
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0096140
Assessment of Acropora palmata in the Mesoamerican Reef SystemCited by: 55
Author(s): Rosa E. Rodríguez-Martínez, Anastazia T. Banaszak, Melanie McField, Aurora U Beltrán-Torres, Lorenzo Álvarez‐Filip
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0102609
Nutrient Addition Dramatically Accelerates Microbial Community SuccessionCited by: 83
Author(s): Joseph E. Knelman, Steven K. Schmidt, Ryan C. Lynch, John L. Darcy, Sarah C. Castle, Cory C. Cleveland, Diana R. Nemergut
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0179438
Biodiversity conservation in an anthropized landscape: Trees, not patch size drive, bird community composition in a low-input agro-ecosystemCited by: 13
Author(s): Eric Mellink, Mónica E. Riojas‐López, Melinda Cárdenas-García
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0194092
Go big or … don't? A field-based diet evaluation of freshwater piscivore and prey fish size relationshipsCited by: 49
Author(s): Jereme W. Gaeta, Tyler D. Ahrenstorff, James S. Diana, William W. Fetzer, Thomas S. Jones, Zach J. Lawson, Michael C. McInerny, Victor J. Santucci, M. Jake Vander Zanden
Software Mentions: 2
Published: over 6 years ago
10.7717/peerj.1473
Flood induced phenotypic plasticity in amphibious genus<i>Elatine</i>(Elatinaceae)Cited by: 18
Author(s): V Attila Molnár, János Tóth, Gábor Sramkó, Orsolya Horváth, Agnieszka Popiela, Attila Mesterházy, Balázs András Lukács
Software Mentions: 1
Published: almost 9 years ago
10.3390/ani8030033
Developing an Ethically Acceptable Virtual Fencing System for SheepCited by: 35
Author(s): Danila Marini, M. Dennis Meuleman, Sue Belson, T.B. Rodenburg, Rick Llewellyn, Lee C
Software Mentions: 1
Published: over 6 years ago
10.3389/fphys.2020.00248
Hypoxia Tolerance of 10 Euphausiid Species in Relation to Vertical Temperature and Oxygen GradientsCited by: 13
Author(s): Nelly Tremblay, Kim Hünerlage, Thorsten Werner
Software Mentions: 1
Published: over 4 years ago
10.7717/peerj.3130
Competition and feeding ecology in two sympatric <i>Xenopus</i> species (Anura: Pipidae)Cited by: 18
Author(s): Solveig Vogt, F. André de Villiers, Flora Ihlow, Dennis Rödder, John Measey
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-018-34281-2
Dairy calves’ personality traits predict social proximity and response to an emotional challengeCited by: 28
Author(s): Benjamin Lecorps, Sarah Krakoff, Daniel M. Weary, M.A.G. von Keyserlingk
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0049273
Reduced Germination of Orobanche cumana Seeds in the Presence of Arbuscular Mycorrhizal Fungi or Their ExudatesCited by: 38
Author(s): Johann Louarn, Francis Carbonne, Philippe Delavault, Guillaume Bécard, Soizic Rochange
Software Mentions: 1
Published: about 12 years ago
10.7717/peerj.5698
What’s for dinner? Diet and potential trophic impact of an invasive anuran<i>Hoplobatrachus tigerinus</i>on the Andaman archipelagoCited by: 11
Author(s): Nitya Prakash Mohanty, John Measey
Software Mentions: 1
Published: about 6 years ago
10.3389/fpsyg.2021.729077
Sharing the Space With the “Victim” Can Increase Help Rates. A Study With Virtual RealityCited by: 0
Author(s): Anna Spagnolli, Mariavittoria Masotina, Mattia Furlan, Patrik Pluchino, Massimiliano Martinelli, Luciano Gamberini
Software Mentions: 1
Published: about 3 years ago
10.1177/2041669515593040
The Taste of TypefaceCited by: 56
Author(s): Carlos Velasco, Andy Woods, Sarah Hyndman, Charles Spence
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0190404
Towards a more practical attention bias test to assess affective state in sheepCited by: 27
Author(s): Jessica E. Monk, Rebecca Doyle, Ian G. Colditz, Sue Belson, G. M. Cronin, Lee C
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0137119
Is the Schwabe Organ a Retained Larval Eye? Anatomical and Behavioural Studies of a Novel Sense Organ in Adult Leptochiton asellus (Mollusca, Polyplacophora) Indicate Links to Larval PhotoreceptorsCited by: 6
Author(s): Lauren Sumner‐Rooney, Julia D. Sigwart
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0246082
Yellowfin tuna (Thunnus albacares) foraging habitat and trophic position in the Gulf of Mexico based on intrinsic isotope tracersCited by: 11
Author(s): Meliza Le-Alvarado, Alfonsina E. Romo-Curiel, Oscar Sosa‐Nishizaki, Oscar Gabriel Hernández-Sánchez, Leticia Barbero, Sharon Z. Herzka
Software Mentions: 1
Published: over 3 years ago
10.1111/mpp.13031
When a knockout is an Achilles’ heel: Resistance to one potyvirus species triggers hypersusceptibility to another one in <i>Arabidopsis thaliana</i>Cited by: 13
Author(s): Delyan Zafirov, Nathalie Giovinazzo, Anna Bastet, Jean‐Luc Gallois
Software Mentions: 1
Published: almost 4 years ago
10.3390/ijerph15061149
Adverse Events Following Immunization in Brazil: Age of Child and Vaccine-Associated Risk Analysis Using Logistic RegressionCited by: 8
Author(s): Sílvia da Silva Lopes, João Lucas da Rosa Perin, Taiane Schaedler Prass, Sandra Maria Deotti Carvalho, Sérgio Lessa, José G. Dórea
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0166512
Winter Activity of Coastal Plain Populations of Bat Species Affected by White-Nose Syndrome and Wind Energy FacilitiesCited by: 29
Author(s): John R. Grider, Angela L. Larsen, Jessica A. Homyack, Matina C. Kalcounis‐Rueppell
Software Mentions: 1
Published: almost 8 years ago
10.1098/rsos.150537
Predator olfactory cues generate a foraging–predation trade-off through prey apprehensionCited by: 19
Author(s): Adam M. Siepielski, Eric Fallon, Kate S. Boersma
Software Mentions: 1
Published: almost 9 years ago
10.1186/1471-2229-13-217
New stable QTLs for berry weight do not colocalize with QTLs for seed traits in cultivated grapevine (Vitis vinifera L.)Cited by: 83
Author(s): Agnès Doligez, Yves Bertrand, Marc Farnos, Michel Grolier, Charles Romieu, Florence Esnault, Sonia Dias, Gilles Berger, Pierre François, Thierry Pons, Patrick Ortigosa, Catherine Roux, Cléa Houel, Valérie Laucou, Roberto Baciliéri, Jean Pierre Péros, Patrice This
Software Mentions: 1
Published: almost 12 years ago
10.1038/s41598-019-42569-0
Positive ecological effects of wind farms on vegetation in China’s Gobi desertCited by: 7
Author(s): Kang Xu, Lingchao He, Hanjian Hu, Shun Liu, Yuanyuan Du, Zhiwei Wang, Yan Li, Liyan Li, Aman Khan, Gen‐Xuan Wang
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0133995
Conserving Biogeography: Habitat Loss and Vicariant Patterns in Endemic Squamates of the Cerrado HotspotCited by: 12
Author(s): Pietro Longo Hollanda de Mello, Ricardo B. Machado, Cristiano de Campos Nogueira
Software Mentions: 1
Published: over 9 years ago
10.3390/md19090504
Phlorotannin and Pigment Content of Native Canopy-Forming Sargassaceae Species Living in Intertidal Rockpools in Brittany (France): Any Relationship with Their Vertical Distribution and Phenology?Cited by: 6
Author(s): Camille Jégou, Solène Connan, Isabelle Bihannic, Stéphane Cérantola, Fabienne Guérard, Valérie Stiger‐Pouvreau
Software Mentions: 1
Published: about 3 years ago
10.3390/ijms21176228
Lipid Dynamics, Identification, and Expression Patterns of Fatty Acid Synthase Genes in an Endoparasitoid, Meteorus pulchricornis (Hymenoptera: Braconidae)Cited by: 6
Author(s): Jiao Wang, Lianju Shen, Xiaorong Xing, Yuqi Xie, Yi-Jiangcheng Li, Zhixiang Liu, Jun Wang, Fu‐An Wu, Sheng Sheng
Software Mentions: 1
Published: about 4 years ago
10.1002/ece3.1542
Discovery–dominance trade‐off among widespread invasive ant speciesCited by: 23
Author(s): Cléo Bertelsmeier, Amaury Avril, Olivier Blight, Hervé Jourdan, Franck Courchamp
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0252858
Effect of the electric field at 50 Hz and variable intensities on biochemical markers in the honey bee’s hemolymphCited by: 5
Author(s): Paweł Migdał, Agnieszka Murawska, Paweł Bieńkowski, Aneta Strachecka, Adam Roman
Software Mentions: 1
Published: over 3 years ago
10.1242/bio.032870
Establishment and long-term maintenance of primary intestinal epithelial cells cultured from the rainbow trout,<i>Oncorhynchus mykiss</i>Cited by: 8
Author(s): Laura M. Langan, Stewart F. Owen, Awadhesh N. Jha
Software Mentions: 1
Published: over 6 years ago
10.1186/s12862-015-0521-z
Growth trajectories in the cave bear and its extant relatives: an examination of ontogenetic patterns in phylogenyCited by: 11
Author(s): Manuela Fuchs, Madeleine Geiger, Madlen Stange, Marcelo R. Sánchez‐Villagra
Software Mentions: 1
Published: about 9 years ago
10.1002/ece3.4064
Community differentiation of bacterioplankton in the epipelagic layer in the South China SeaCited by: 13
Author(s): Yi Zhang, Jie Li, Xuhua Cheng, Yinfeng Luo, Zhimao Mai, Si Zhang
Software Mentions: 1
Published: over 6 years ago
10.1002/jmor.21298
Morphological study of the integument and corporal skeletal muscles of two psammophilous members of Scincidae (<i>Scincus scincus</i>and<i>Eumeces schneideri</i>)Cited by: 4
Author(s): Jérôme Caneï, Denis Nonclercq
Software Mentions: 1
Published: almost 4 years ago
10.3390/ani11030863
Honey Bee Proteolytic System and Behavior Parameters under the Influence of an Electric Field at 50 Hz and Variable Intensities for a Long Exposure TimeCited by: 10
Author(s): Paweł Migdał, Agnieszka Murawska, Aneta Strachecka, Paweł Bieńkowski, Adam Roman
Software Mentions: 1
Published: over 3 years ago
10.1098/rsbl.2015.0977
Attention bias to threat indicates anxiety differences in sheepCited by: 56
Author(s): Lee C, Else Verbeek, Rebecca Doyle, Melissa Bateson
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0030058
Metagenomic Analysis of the Bioremediation of Diesel-Contaminated Canadian High Arctic SoilsCited by: 204
Author(s): Étienne Yergeau, Sylvie Sanschagrin, Danielle Beaumier, Charles W. Greer
Software Mentions: 1
Published: almost 13 years ago
10.1186/2193-1801-3-322
Regional distribution of mercury in sediments of the main rivers of French Guiana (Amazonian basin)Cited by: 18
Author(s): Valérie Laperche, Jennifer Hellal, Régine Maury-Brachet, Bernard Joseph, Pierre Laporte, Dominique Breeze, François Blanchard
Software Mentions: 1
Published: over 10 years ago
10.1002/ece3.2970
Remote sensing-based landscape indicators for the evaluation of threatened-bird habitats in a tropical forestCited by: 12
Author(s): Minerva Singh, Timo Tokola, Zhengyang Hou, Claudia Notarnicola
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0036099
Spatial Pattern of Standing Timber Value across the Brazilian AmazonCited by: 7
Author(s): Sadia E. Ahmed, Robert M. Ewers
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0129368
Spatial and Temporal Variation in Reproduction of a Generalist Crocodilian, Caiman crocodilus yacare, in a Seasonally Flooded WetlandCited by: 10
Author(s): Zilca Campos, Guilherme Mourão, Marcos Eduardo Coutinho, William E. Magnusson, B. M. A. Soriano
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0162313
Intraspecific Differences in Biogeochemical Responses to Thermal Change in the Coccolithophore Emiliania huxleyiCited by: 16
Author(s): Paul G. Matson, Tanika M. Ladd, Elisa R. Halewood, Rahul P. Sangodkar, Bradley F. Chmelka, M. Débora Iglesias‐Rodríguez
Software Mentions: 1
Published: about 8 years ago
10.1186/1471-2474-15-135
The Italian version of the Physical Therapy Patient Satisfaction Questionnaire - [PTPSQ-I(15)]: psychometric properties in a sample of inpatientsCited by: 7
Author(s): Carla Vanti, Paolo Pillastrini, Marco Monticone, Daniele Ceron, Francesca Bonetti, Raffaella Piccarreta, Andrew A. Guccione, Francesco Saverio Violante
Software Mentions: 1
Published: over 10 years ago
10.1111/pbi.13096
Mimicking natural polymorphism in <i><scp>eIF</scp>4E</i> by <scp>CRISPR</scp>‐Cas9 base editing is associated with resistance to potyvirusesCited by: 106
Author(s): Anna Bastet, Delyan Zafirov, Nathalie Giovinazzo, Anouchka Guyon‐Debast, Fabien Nogué, Christophe Robaglia, Jean‐Luc Gallois
Software Mentions: 1
Published: over 5 years ago
10.3389/fmicb.2013.00062
The Role of Tetraether Lipid Composition in the Adaptation of Thermophilic Archaea to AcidityCited by: 57
Author(s): Eric S. Boyd, Trinity L. Hamilton, Jinxiang Wang, Lin He, Chuanlun L. Zhang
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0077854
Prevention of Anti-microbial Peptide LL-37-Induced Apoptosis and ATP Release in the Urinary Bladder by a Modified GlycosaminoglycanCited by: 24
Author(s): Won Yong Lee, Justin R. Savage, Jianxing Zhang, Wanjian Jia, Siam Oottamasathien, Glenn D. Prestwich
Software Mentions: 1
Published: about 11 years ago
10.1111/phen.12134
Neural and non-neural contributions to sexual dimorphism of mid-day sleep in<i>Drosophila melanogaster</i>: a pilot studyCited by: 10
Author(s): Mobina Khericha, Jaison B. Kolenchery, Eran Tauber
Software Mentions: 1
Published: over 8 years ago
10.3389/fmicb.2019.01503
Variability of the Ability of Complex Microbial Communities to Exclude Microbes Carrying Antibiotic Resistance Genes in RabbitsCited by: 4
Author(s): Catherine Achard, Véronique Dupouy, suzanne siviglia, Nathalie Arpaillange, Laurent Cauquil, Alain Bousquet‐mélou, Olivier Zemb
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0013031
Relating Mutant Genotype to Phenotype via Quantitative Behavior of the NADPH Redox Cycle in Human ErythrocytesCited by: 19
Author(s): Pedro M. B. M. Coelho, Armindo Salvador, Michael A. Savageau
Software Mentions: 1
Published: about 14 years ago
10.3389/fmicb.2017.01679
Comparative Genomics of Burkholderia singularis sp. nov., a Low G+C Content, Free-Living Bacterium That Defies Taxonomic Dissection of the Genus BurkholderiaCited by: 31
Author(s): Peter Vandamme, Charlotte Peeters, Birgit De Smet, Erin P. Price, Derek S. Sarovich, Deborah A. Henry, Trevor J. Hird, James E. A. Zlosnik, Mark Mayo, Jeffrey Warner, Anthony L. Baker, Bart J. Currie, Aurélien Carlier
Software Mentions: 1
Published: about 7 years ago