Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: pedigreemm
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/pedigreemm
Pedigree-based mixed-effects models
6 versions
Latest release: over 10 years ago
3 dependent packages
616 downloads last month
Papers Mentioning pedigreemm 17
10.1371/journal.pone.0156744
Genome-Assisted Prediction of Quantitative Traits Using the R Package sommerCited by: 408
Author(s): Giovanny Covarrubias‐Pazaran
Software Mentions: 9
Published: over 8 years ago
10.3389/fgene.2021.680569
lme4GS: An R-Package for Genomic SelectionCited by: 8
Author(s): Diana Caamal-Pat, Paulino Pérez‐Rodríguez, José Crossa, Ciro Velasco‐Cruz, Sergio Pérez-Elizalde, Mario Alberto Vázquez-Peña
Software Mentions: 8
Published: over 3 years ago
10.1186/s12859-018-2057-x
lme4qtl: linear mixed models with flexible covariance structure for genetic studies of related individualsCited by: 111
Author(s): Andrey Ziyatdinov, Miquel Vázquez-Santiago, Héléna Brunel, Ángel Martinez-Perez, Hugues Aschard, José Manuel Nieto Soria
Software Mentions: 5
Published: over 6 years ago
10.1186/s12711-020-00557-3
Inbreeding depression for kit survival at birth in a rabbit population under long-term selectionCited by: 3
Author(s): Ino Čurik, György Kövér, J. Farkas, Zsolt Szendrő, Róbert Romvári, Johann Sölkner, I. Nagy
Software Mentions: 4
Published: over 4 years ago
10.3389/fgene.2021.655638
Alternative Ways of Computing the Numerator Relationship MatrixCited by: 4
Author(s): Mohammad Ali Nilforooshan, Dorian J. Garrick, B. L. Harris
Software Mentions: 4
Published: over 3 years ago
10.1038/s41398-018-0226-3
Genetic pleiotropy between mood disorders, metabolic, and endocrine traits in a multigenerational pedigreeCited by: 13
Author(s): Rachel L. Kember, Liping Hou, Jianru Xiao, Lars Højsgaard Andersen, Arpita Ghorai, Lissette Estrella, Laura Almasy, Francis J. McMahon, Christopher D. Brown, Maja Bućan
Software Mentions: 3
Published: about 6 years ago
10.3389/fgene.2015.00120
A re-formulation of generalized linear mixed models to fit family data in genetic association studiesCited by: 6
Author(s): Tao Wang, Peng He, Kwang Woo Ahn, Xujing Wang, Soumitra Ghosh, Purushottam W. Laud
Software Mentions: 3
Published: over 9 years ago
10.1186/s12711-015-0100-1
Accounting for trait architecture in genomic predictions of US Holstein cattle using a weighted realized relationship matrixCited by: 48
Author(s): Francesco Tiezzi, Christian Maltecca
Software Mentions: 3
Published: over 9 years ago
10.1186/s13059-016-1056-3
Fitness consequences of polymorphic inversions in the zebra finch genomeCited by: 41
Author(s): Ulrich Knief, Georg Hemmrich-Stanisak, Michael Wittig, André Franke, Simon C. Griffith, Bart Kempenaers, Wolfgang Forstmeier
Software Mentions: 3
Published: about 8 years ago
10.1038/s41598-017-09552-z
Blood triglyceride levels are associated with DNA methylation at the serine metabolism gene PHGDHCited by: 31
Author(s): Vinh Truong, Siying Huang, Jessica Dennis, Mathieu Lemire, Nora Zwingerman, Dylan Aïssi, Irfahan Kassam, Claire Perret, Philip S. Wells, Pierre‐Emmanuel Morange, Michael D. Wilson, David‐Alexandre Trégouët, France Gagnon
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pgen.1006034
Discovery of Genetic Variation on Chromosome 5q22 Associated with Mortality in Heart FailureCited by: 27
Author(s): J. G. Smith, Janine F. Felix, Alanna C. Morrison, Ανδρέας Καλογερόπουλος, Stella Trompet, Jemma B. Wilk, Olof Gidlöf, Xinchen Wang, Michael Morley, Michael Mendelson, Roby Joehanes, Symen Ligthart, Xiaoyin Shan, Joshua C. Bis, Ying A. Wang, Marketa Sjögren, Julius S. Ngwa, Jeffrey Brandimarto, David J. Stott, David Aguilar, Kenneth Rice, Howard D. Sesso, Serkalem Demissie, Brendan M. Buckley, Kent D. Taylor, Ian Ford, Chen Yao, Chunyu Liu, Nona Sotoodehnia, Pim van der Harst, Bruno H. Ch. Stricker, Stephen B. Kritchevsky, Yongmei Liu, J. Michael Gaziano, Albert Hofman, Christine S. Moravec, André G. Uitterlinden, M Kellis, Joyce B. J. van Meurs, Kenneth B. Margulies, Abbas Dehghan, Daniel Levy, Björn Olde, Bruce M. Psaty, L. Adrienne Cupples, J. Wouter Jukema, Luc Djoussé, Oscar H. Franco, Eric Boerwinkle, Laurie A. Boyer, Christopher Newton‐Cheh, Javed Butler, Ramachandran S. Vasan, Thomas P. Cappola, Nicholas L. Smith
Software Mentions: 2
Published: over 8 years ago
10.1186/s13059-016-1142-6
Integrated genome-wide analysis of expression quantitative trait loci aids interpretation of genomic association studiesCited by: 145
Author(s): Roby Joehanes, Xiaoling Zhang, Tianxiao Huan, Chen Yao, Saixia Ying, Quang Tri Nguyen, Cumhur Yusuf Demirkale, Michael Feolo, Nataliya Sharopova, Anne Sturcke, Alejandro A. Schäffer, Nancy L. Heard‐Costa, Han Chen, Poching Liu, Thomas J. Wang, Kimberly A. Woodhouse, Kahraman Tanrıverdi, Jane E. Freedman, Nalini Raghavachari, Josée Dupuis, Andrew D. Johnson, Christopher J. O’Donnell, Daniel Levy, Peter J. Munson
Software Mentions: 2
Published: almost 8 years ago
10.1186/1753-6561-8-S1-S84
Comparing baseline and longitudinal measures in association studiesCited by: 2
Author(s): Shuai Wang, Wei Gao, Julius S. Ngwa, Catherine Allard, Ching‐Ti Liu, L. Adrienne Cupples
Software Mentions: 2
Published: over 10 years ago
10.3389/fphar.2018.00207
Epigenome-Wide Association Study of Soluble Tumor Necrosis Factor Receptor 2 Levels in the Framingham Heart StudyCited by: 9
Author(s): Michael Mendelson, Roby Johannes, Chunyu Liu, Tianxiao Huan, Chen Yao, Xiao Miao, Joanne M. Murabito, Josée Dupuis, Daniel Levy, Emelia J. Benjamin, Honghuang Lin
Software Mentions: 2
Published: over 6 years ago
10.3389/fgene.2013.00239
Association testing to detect gene–gene interactions on sex chromosomes in trio dataCited by: 3
Author(s): Yeonok Lee, Debashis Ghosh, Yu Zhang
Software Mentions: 1
Published: almost 12 years ago
10.1186/1753-6561-8-S1-S68
Prediction of genetic contributions to complex traits using whole genome sequencing dataCited by: 4
Author(s): Chen Yao, Ning Leng, K.A. Weigel, Kristine E. Lee, Corinne D. Engelman, Kristin J. Meyers
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0055666
High Number of Previous Plasmodium falciparum Clinical Episodes Increases Risk of Future Episodes in a Sub-Group of IndividualsCited by: 10
Author(s): Cheikh Loucoubar, Laura Grange, Paul Rácz, Augustin Huret, Adama Tall, Olivier Telle, Christian Roussilhon, Joseph Faye, Fatoumata Diène-Sarr, Jean‐François Trape, Odile Mercereau–Puijalon, Anavaj Sakuntabhai, Jean‐François Bureau
Software Mentions: 1
Published: almost 12 years ago