cran: pROC | Projects | Ecosyste.ms: Papers

10.1042/BSR20200295

Identification of hub driving genes and regulators of lung adenocarcinoma based on the gene Co-expression network
Cited by: 5
Author(s): Zihao Xu, Zilong Wu, Jiatang Xu, Jingtao Zhang, Bentong Yu
Software Mentions: 3
Published: almost 5 years ago

10.1155/2021/5517786

Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease
Cited by: 4
Author(s): Lijiao Zhang, Dayuan Lou, Dan He, Ying Wang, Yuhang Wu, Xinyang Cao, Ping Qü
Software Mentions: 3
Published: over 3 years ago

10.1155/2019/3616852

Radiomics Signatures of Computed Tomography Imaging for Predicting Risk Categorization and Clinical Stage of Thymomas
Cited by: 21
Author(s): Xihai Wang, Wei Sun, Hongyuan Liang, Xiaonan Mao, Zaiming Lu
Software Mentions: 3
Published: over 5 years ago

10.1155/2020/6943103

Comprehensive Bioinformatics Analysis Reveals Hub Genes and Inflammation State of Rheumatoid Arthritis
Cited by: 21
Author(s): Conglin Ren, Mingshuang Li, Weibin Du, Jianlan Lü, Yang Zheng, Haipeng Xu, Renfu Quan
Software Mentions: 3
Published: over 4 years ago

10.1186/s13048-020-00712-w

A novel signature of two long non-coding RNAs in BRCA mutant ovarian cancer to predict prognosis and efficiency of chemotherapy
Cited by: 4
Author(s): Yinglian Pan, Jia Li, Yuzhu Liu, Yiyu Han, Qian Li, Qin Zou, Zhongpei Zhang, Jin Long Huang, Qingchun Deng
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-019-45705-y

Relevant Word Order Vectorization for Improved Natural Language Processing in Electronic Health Records
Cited by: 7
Author(s): Jeffrey Thompson, Jinxiang Hu, Dinesh Pal Mudaranthakam, David Streeter, Lisa Neums, Michele Park, Devin C. Koestler, Byron Gajewski, Roy A. Jensen, Matthew S. Mayo
Software Mentions: 3
Published: over 5 years ago

10.1155/2021/5576348

Reliability and Validity of the Czech Version of the Pittsburgh Sleep Quality Index in Patients with Sleep Disorders and Healthy Controls
Cited by: 5
Author(s): Denisa Manková, Daniela Dudysová, Jan Novák, Eva Fárková, Karolína Janků, Monika Kliková, Jitka Bušková, Aleš Bartoš, Karel Šonka, Jana Kopřivová
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0165513

The Structure and Distribution of Benthic Communities on a Shallow Seamount (Cobb Seamount, Northeast Pacific Ocean)
Cited by: 33
Author(s): Cherisse Du Preez, Janelle M. R. Curtis, M. Elizabeth Clarke
Software Mentions: 3
Published: over 8 years ago

10.1001/jamanetworkopen.2019.6835

Comparison of Machine Learning Methods With National Cardiovascular Data Registry Models for Prediction of Risk of Bleeding After Percutaneous Coronary Intervention
Cited by: 52
Author(s): Bobak J. Mortazavi, Emily M. Bucholz, Nihar R. Desai, Chenxi Huang, Jeptha P. Curtis, Frederick A. Masoudi, Richard E. Shaw, Sahand Negahban, Harlan M. Krumholz
Software Mentions: 3
Published: over 5 years ago

10.1186/s40635-015-0062-1

Tumor necrosis factor receptor 1 (TNFRI) for ventilator-associated pneumonia diagnosis by cytokine multiplex analysis
Cited by: 15
Author(s): Ignacio Martín‐Loeches, Lieuwe D. J. Bos, Pedro Póvoa, Paula Ramírez, Marcus J. Schultz, Antoni Torres, Antonio Artigas
Software Mentions: 3
Published: over 9 years ago

10.1155/2021/6633563

Shared Molecular Mechanisms between Alzheimer’s Disease and Periodontitis Revealed by Transcriptomic Analysis
Cited by: 10
Author(s): Jieqi Jin, Mengkai Guang, Anthony Chukwunonso Ogbuehi, Simin Li, Kai Zhang, Yihong Ma, Aneesha Acharya, Bihan Guo, Zongwu Peng, Xiangqiong Liu, Yupei Deng, Ziyu Fang, Xiongjie Zhu, Shiting Hua, Cong Liu, Rainer Haak, Dirk Ziebolz, Gerhard Schmalz, Lei Liu, Baohua Xu, Xiaofeng Huang
Software Mentions: 3
Published: almost 4 years ago

10.1155/2020/4927547

Integrated Transcriptomic Analysis Reveals the Molecular Mechanism of Meningiomas by Weighted Gene Coexpression Network Analysis
Cited by: 0
Author(s): Biao Yang, Shuxun Wei, Yupo Ma, Sheng‐Hua Chu
Software Mentions: 3
Published: over 4 years ago

10.1155/2021/3212878

Peripheral Blood Cells from Patients with Hodgkin’s and Diffuse Large B Cell Lymphomas May Be a Better Source of Candidate Diagnostic miRNAs Than Circulating miRNAs
Cited by: 0
Author(s): Ewa Paszkiewicz‐Kozik, Agnieszka Paziewska, Maria Kulecka, Michalina Dąbrowska, Anna Kluska, Aneta Bałabas, Magdalena Piątkowska, Filip Ambrożkiewicz, J. Tajer, W. Osiadacz, Joanna Romejko‐Jarosińska, Martyna Kotarska, Natalia Żeber‐Lubecka, Jakub Karczmarski, Lidia Popławska, Michał Mikula, Piotr Rutkowski, Jan Walewski, Jerzy Ostrowski
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0195861

Machine learning-based diagnosis for disseminated intravascular coagulation (DIC): Development, external validation, and comparison to scoring systems
Cited by: 9
Author(s): Jihoon G. Yoon, JoonNyung Heo, Minkyu Kim, Yu Jin Park, Min Hyuk Choi, Jaewoo Song, Kangsan Wyi, Hakbeen Kim, Olivier Duchenne, Soowon Eom, Yury Tsoy
Software Mentions: 3
Published: almost 7 years ago

10.1186/s40364-018-0133-z

Associations of single nucleotide polymorphisms with mucinous colorectal cancer: genome-wide common variant and gene-based rare variant analyses
Cited by: 4
Author(s): Michelle E. Penney, Patrick S. Parfrey, Sevtap Savas, Yildiz E. Yilmaz
Software Mentions: 3
Published: over 6 years ago

10.3389/fvets.2018.00229

Evaluation of the Performance of the IDvet IFN-Gamma Test for Diagnosis of Bovine Tuberculosis in Spain
Cited by: 12
Author(s): María Luisa de la Cruz, Adam J. Branscum, Jesus Nacar, Enrique Pages, Pilar Pozo, Andrés Perez, Anna Grau, José Luis Sáez, Lucía de Juan, Rosa Díaz, Olga Mínguez, Julio Álvarez
Software Mentions: 3
Published: over 6 years ago

10.3390/biology10060465

GWAS Links New Variant in Long Non-Coding RNA LINC02006 with Colorectal Cancer Susceptibility
Cited by: 4
Author(s): Ewa E. Hennig, Anna Kluska, Magdalena Piątkowska, Maria Kulecka, Aneta Bałabas, Natalia Żeber‐Lubecka, Krzysztof Goryca, Filip Ambrożkiewicz, Jakub Karczmarski, Tomasz Olesiński, Łukasz Zyskowski, Jerzy Ostrowski
Software Mentions: 3
Published: over 3 years ago

10.3389/fvets.2020.544707

Endophyte-Infected Tall Fescue Affects Rumen Microbiota in Grazing Ewes at Gestation and Lactation
Cited by: 5
Author(s): Jianmin Chai, Saleh Alrashedi, Ken Coffey, J.M. Burke, Kristina M. Feye, Steven C. Ricke, Si Hong Park, J. L. Edwards, Jiangchao Zhao
Software Mentions: 3
Published: over 4 years ago

10.1136/bmjdrc-2021-002150

Development and validation of a clinical prediction rule for development of diabetic foot ulceration: an analysis of data from five cohort studies
Cited by: 7
Author(s): Francesca M Chappell, Fay Crawford, Margaret Horne, Graham Leese, Angela Martin, David Weller, Andrew J.M. Boulton, Caroline A. Abbott, Matilde Monteiro‐Soares, Aristidis Veves, Richard D Riley
Software Mentions: 3
Published: almost 4 years ago

10.3390/ani11040938

Assessment of the Behavioural Response of Korean Water Deer (Hydropotes inermis argyropus) to Different Fence Heights
Cited by: 3
Author(s): Hee-Bok Park, Donggul Woo, Tae Young Choi, Sungwon Hong
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12917-018-1762-z

Assessing the performance of a Fasciola gigantica serum antibody ELISA to estimate prevalence in cattle in Cameroon
Cited by: 9
Author(s): Robert F. Kelly, Stella Mazeri, Carol A. Hartley, Saidou M. Hamman, Victor Ngu Ngwa, Egbe Franklyn Nkongho, Vincent N. Tanya, Melissa Sander, Lucy Ndip, K. L. Morgan, Adrian Muwonge, Ian Handel, B. M. C. de Bronsvoort, Diana Williams
Software Mentions: 3
Published: about 6 years ago

10.7150/ijms.47356

Potential mechanism of RRM2 for promoting Cervical Cancer based on weighted gene co-expression network analysis
Cited by: 11
Author(s): Jingtao Wang, Yuexiong Yi, Yurou Chen, Ye Xiong, Wei Zhang
Software Mentions: 3
Published: about 5 years ago

10.1155/2021/2898336

Genetic Polymorphisms of IFNG, IFNGR1, and Androgen Receptor and Chronic Prostatitis/Chronic Pelvic Pain Syndrome in a Chinese Han Population
Cited by: 0
Author(s): Lei Chen, Junyi Chen, Fan Mo, Zichen Bian, Chen Jin, Xianguo Chen, Chaozhao Liang
Software Mentions: 3
Published: over 3 years ago

10.1136/heartjnl-2017-312489

Novel United Kingdom prognostic model for 30-day mortality following transcatheter aortic valve implantation
Cited by: 31
Author(s): Glen P. Martin, Matthew Sperrin, Peter Ludman, Mark de Belder, Simon Redwood, Jonathan N. Townend, Mark Gunning, Neil Moat, Adrian P. Banning, Iain Buchan, Mamas A. Mamas
Software Mentions: 3
Published: about 7 years ago

10.3390/ani10061017

Predicting Productive Performance in Grow-Finisher Pigs Using Birth and Weaning Body Weight
Cited by: 19
Author(s): Jordi Camp Montoro, Edgar García Manzanilla, David Solà-Oriol, Ramón Muns, J. Gasa, Oliver Clear, Julia Adriana Calderón Díaz
Software Mentions: 3
Published: over 4 years ago

10.3390/diagnostics11061016

Contrast-Enhanced Black Blood MRI Sequence Is Superior to Conventional T1 Sequence in Automated Detection of Brain Metastases by Convolutional Neural Networks
Cited by: 5
Author(s): Jonathan Kottlors, Simon Geißen, Hannah Jendreizik, Nils Große Hokamp, Philipp Fervers, Lenhard Pennig, Kai Roman Laukamp, Christoph Kabbasch, David Maintz, Marc Schlamann, Jan Borggrefe
Software Mentions: 3
Published: over 3 years ago

10.1155/2021/6692022

Identification of a Seven-lncRNA-mRNA Signature for Recurrence and Prognostic Prediction in Relapsed Acute Lymphoblastic Leukemia Based on WGCNA and LASSO Analyses
Cited by: 6
Author(s): Haiyan Qi, Long Chi, Xiaogang Wang, Xing Jin, Wensong Wang, Jianping Lan
Software Mentions: 3
Published: over 3 years ago

10.1186/1746-6148-8-172

Risk map and spatial determinants of pancreas disease in the marine phase of Norwegian Atlantic salmon farming sites
Cited by: 13
Author(s): Saraya Tavornpanich, Mathilde Paul, Hildegunn Viljugrein, David Abrial, Daniel Ferrer Jiménez, Edgar Brun
Software Mentions: 3
Published: about 13 years ago

10.3389/fpubh.2020.00475

Characteristic of 523 COVID-19 in Henan Province and a Death Prediction Model
Cited by: 24
Author(s): Xiaoxu Ma, Ang Li, Mengfan Jiao, Qingmiao Shi, Xiaocai An, Yonghai Feng, Xing Liu, Hongxia Liang, Jiajun Chen, Huiling Li, Juan Li, Zhigang Ren, Ranran Sun, Guangying Cui, Yongjian Zhou, Ming Huei Cheng, Pengfei Jiao, Yu Wang, Jiyuan Xing, Shen Shen, Qingxian Zhang, Anding Xu, Zujiang Yu
Software Mentions: 3
Published: over 4 years ago

10.3390/diagnostics11081364

Pepsinogen and Serum IgG Detection Is a Valuable Diagnostic Method for Helicobacter pylori Infection in a Low-Prevalence Country: A Report from Sri Lanka
Cited by: 5
Author(s): Dalla Doohan, Kartika Afrida Fauzia, Jeewantha Rathnayake, M.D. Lamawansa, Langgeng Agung Waskito, Vo Phuoc Tuan, Dashdorj Azzaya, Evariste Tshibangu Kabamba, Bui Hoang Phuc, Shamshul Ansari, Junko Akada, Takashi Matsumoto, Tomohisa Uchida, Takeshi Matsuhisa, Yoshio Yamaoka
Software Mentions: 3
Published: over 3 years ago

10.18632/aging.202882

Transcriptome integration analysis and specific diagnosis model construction for Hodgkin's lymphoma, diffuse large B-cell lymphoma, and mantle cell lymphoma
Cited by: 2
Author(s): Wen‐Xing Li, Shao‐Xing Dai, Sanqi An, Tingting Sun, Justin Liu, Jun Wang, Leyna G. Liu, Yang Xiao, Hua Yang, Lixia Fan, Xiaoli Zhang, Wanqin Liao, Hua You, Luca Tamagnone, Fang Liu, Jing‐Fei Huang, Dahai Liu
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0238829

COVID-19 infections and outcomes in a live registry of heart failure patients across an integrated health care system
Cited by: 17
Author(s): César Caraballo, Megan McCullough, Michael Fuery, Fouad Chouairi, Craig Keating, Neal G. Ravindra, Paul E. Miller, Maricar Malinis, Nitu Kashyap, Allen Hsiao, F. Perry Wilson, Jeptha P. Curtis, Matthew Grant, Eric J. Velázquez, Nihar R. Desai, Tariq Ahmad
Software Mentions: 3
Published: over 4 years ago

10.3390/ijms20133360

Metabolomic Studies of Tissue Injury in Nonhuman Primates Exposed to Gamma-Radiation
Cited by: 22
Author(s): Amrita K. Cheema, Khyati Y. Mehta, Meena Rajagopal, Stephen Y. Wise, Oluseyi O. Fatanmi, Vijay K. Singh
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2017.01944

Detection of Pathogen Exposure in African Buffalo Using Non-Specific Markers of Inflammation
Cited by: 17
Author(s): Caroline K. Glidden, Brianna R. Beechler, Peter Buss, Bryan Charleston, Lin‐Mari de Klerk‐Lorist, Francois Frederick Maree, Tim Muller, Eva Pérez-Martín, Katherine Anne Scott, O. Louis van Schalkwyk, Anna E. Jolles
Software Mentions: 3
Published: about 7 years ago

10.3389/fmed.2020.570483

Developing Preoperative Nomograms to Predict Any-Stage and Stage III-IV Endometriosis in Infertile Women
Cited by: 3
Author(s): Zaixin Guo, Penghui Feng, Xiaohan Chen, Ruiyi Tang, Qi Yu
Software Mentions: 3
Published: over 4 years ago

10.18632/oncotarget.17329

Identification of aberrantly expressed long non-coding RNAs in stomach adenocarcinoma
Cited by: 49
Author(s): Jianbin Gu, Yong Li, Li Fan, Qun Zhao, Bibo Tan, Kelei Hua, Guobin Wu
Software Mentions: 3
Published: almost 8 years ago

10.18632/oncotarget.18512

Identification of dysregulated long non-coding RNAs/microRNAs/mRNAs in TNM I stage lung adenocarcinoma
Cited by: 35
Author(s): Ziqiang Tian, Wen Pang Su, Yuefeng Zhang, Xinqiang Shi, Yao Zhu, Yong Xu, Huilai Lv, Guiying Wang
Software Mentions: 3
Published: over 7 years ago

10.1186/s12888-021-03218-x

Validation of the parent version of the Strengths and Difficulties Questionnaire (SDQ) to screen mental health problems among school-age children in Mongolia
Cited by: 7
Author(s): Ai Aoki, Togoobaatar Ganchimeg, Naranbaatar Nyam, Khishigsuren Zuunnast, Lkagvasuren Gundegmaa, Shagdar Bat-Erdene, Bolorchimeg Munkhbaatar, Rintaro Mori, Ayako Kikuchi, Hideaki Soya, Kazuhiko Kasai, Kenji Takehara
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0245841

Validation of the Preoperative Score to Predict Postoperative Mortality (POSPOM) in Germany
Cited by: 5
Author(s): Yannik C. Layer, Jan Menzenbach, Yonah L. Layer, Andreas Mayr, Tobias Hilbert, Markus Velten, Andreas Hoeft, Maria Wittmann
Software Mentions: 3
Published: about 4 years ago

10.3390/ijerph15020277

Identification of Pancreatic Injury in Patients with Elevated Amylase or Lipase Level Using a Decision Tree Classifier: A Cross-Sectional Retrospective Analysis in a Level I Trauma Center
Cited by: 14
Author(s): Cheng-Shyuan Rau, Shao-Chun Wu, Peng‐Chen Chien, Pao‐Jen Kuo, Yi‐Chun Chen, Hsiao-Yun Hsieh, Ching-Hua Hsieh, Hang-Tsung Liu
Software Mentions: 3
Published: about 7 years ago

10.1186/s12955-020-01398-w

Practical issues encountered while determining Minimal Clinically Important Difference in Patient-Reported Outcomes
Cited by: 16
Author(s): Pascal Woaye-Hune, Jean-Benoît Hardouin, Paul‐Antoine Lehur, G. Meurette, Antoine Vanier
Software Mentions: 3
Published: over 4 years ago

10.3389/fmed.2020.592007

Machine Learning to Predict Contrast-Induced Acute Kidney Injury in Patients With Acute Myocardial Infarction
Cited by: 11
Author(s): Ling Sun, Wenwu Zhu, Xin Chen, Jianguang Jiang, Yuan Ji, Nan Liu, Yajing Xu, Zichuan Yi, Zhi-Qin Sun, Qingjie Wang, Fengxiang Zhang
Software Mentions: 3
Published: over 4 years ago

10.1111/hex.12941

Assessing decision regret in caregivers of deceased German people with cancer—A psychometric validation of the Decision Regret Scale for Caregivers
Cited by: 14
Author(s): Markus W. Haun, Alexander Schakowski, Ariane Preibsch, Hans‐Christoph Friederich, Mechthild Hartmann
Software Mentions: 3
Published: over 5 years ago

10.1093/conphys/coy001

Can concentrations of steroid hormones in brown bear hair reveal age class?
Cited by: 18
Author(s): Marc Cattet, Gordon B. Stenhouse, John Boulanger, David M. Janz, Luciene Kapronczai, Jon E. Swenson, Andreas Zedrosser
Software Mentions: 3
Published: about 7 years ago

10.3390/ijerph16020250

Deep Learning Algorithms with Demographic Information Help to Detect Tuberculosis in Chest Radiographs in Annual Workers’ Health Examination Data
Cited by: 65
Author(s): Seok‐Jae Heo, Yangwook Kim, Sehyun Yun, Sung Shil Lim, Jihyun Kim, Chung Mo Nam, Sohee Park, Inkyung Jung, Jin Ha Yoon
Software Mentions: 3
Published: about 6 years ago

10.3390/ijerph17103703

A Machine Learning-Based Approach for Predicting Patient Punctuality in Ambulatory Care Centers
Cited by: 23
Author(s): Sharan Srinivas
Software Mentions: 3
Published: over 4 years ago

10.1080/19490976.2020.1869505

Establishing a novel colorectal cancer predictive model based on unique gut microbial single nucleotide variant markers
Cited by: 20
Author(s): Chenchen Ma, Kaining Chen, Yuanyuan Wang, Chaoping Cen, Qixiao Zhai, Jiachao Zhang
Software Mentions: 3
Published: about 4 years ago

10.3389/fgene.2021.687979

Identification of Potential Prognostic Biomarkers Associated With Cancerometastasis in Skin Cutaneous Melanoma
Cited by: 3
Author(s): Yang Li, Shanshan Lyu, Zhe Gao, Weifeng Zha, Ping Wang, Yuxi Shan, Jianzhong He, Suyang Huang
Software Mentions: 3
Published: over 3 years ago

10.3389/fgene.2020.00301

Genome-Wide Analysis of Methylation-Driven Genes and Identification of an Eight-Gene Panel for Prognosis Prediction in Breast Cancer
Cited by: 12
Author(s): Yanshen Kuang, Ying Wang, Wanli Zhai, Xuning Wang, Bingdong Zhang, Maolin Xu, Shaohua Guo, Mu Ke, Baoqing Jia, Hongyi Liu
Software Mentions: 3
Published: almost 5 years ago

10.3389/fgene.2020.593273

KPNA2-Associated Immune Analyses Highlight the Dysregulation and Prognostic Effects of GRB2, NRAS, and Their RNA-Binding Proteins in Hepatocellular Carcinoma
Cited by: 9
Author(s): Xiuzhi Zhang, Jialing Zhang, Fenglan Gao, Shasha Fan, Liping Dai, Jinzhong Zhang
Software Mentions: 3
Published: over 4 years ago

10.3389/fpsyt.2016.00034

Utility of Machine-Learning Approaches to Identify Behavioral Markers for Substance Use Disorders: Impulsivity Dimensions as Predictors of Current Cocaine Dependence
Cited by: 53
Author(s): Woo-Young Ahn, Divya Ramesh, F. Gerard Moeller, Jasmin Vassileva
Software Mentions: 3
Published: almost 9 years ago

10.3389/fgene.2021.671585

Upregulation of LIMK1 Is Correlated With Poor Prognosis and Immune Infiltrates in Lung Adenocarcinoma
Cited by: 12
Author(s): Gui-Fu Lu, Ying Zhou, Chenxi Zhang, Yu Zhang
Software Mentions: 3
Published: over 3 years ago

10.3389/fgene.2019.01142

Identifying Key Genes and Functionally Enriched Pathways in Sjögren’s Syndrome by Weighted Gene Co-Expression Network Analysis
Cited by: 50
Author(s): Qiuming Yao, Zhenyu Song, Bin Wang, Qiu Qin, Jinan Zhang
Software Mentions: 3
Published: over 5 years ago

10.3389/fendo.2021.628907

Identification of Key Pathways and Genes in Obesity Using Bioinformatics Analysis and Molecular Docking Studies
Cited by: 7
Author(s): Harish Joshi, Basavaraj Vastrad, Nidhi Joshi, Chanabasayya Vastrad, Anandkumar Tengli, Iranna Kotturshetti
Software Mentions: 3
Published: over 3 years ago

10.3389/fendo.2021.721812

A Novel Diagnostic Predictive Model for Idiopathic Short Stature in Children
Cited by: 4
Author(s): Jinghong Yuan, Du Zhi, Zhiwen Wu, Yanqin Yang, Xigao Cheng, Xijuan Liu, Jingyu Jia
Software Mentions: 3
Published: over 3 years ago

10.3390/ijms18020449

Exhaled Breath Metabolomics for the Diagnosis of Pneumonia in Intubated and Mechanically-Ventilated Intensive Care Unit (ICU)-Patients
Cited by: 44
Author(s): Pouline M. P. van Oort, Sanne de Bruin, Hans Weda, Hugo H. Knobel, Marcus J. Schultz, Lieuwe Bos
Software Mentions: 3
Published: almost 8 years ago

10.1186/s13195-017-0266-6

Glutaminyl cyclase activity correlates with levels of Aβ peptides and mediators of angiogenesis in cerebrospinal fluid of Alzheimer’s disease patients
Cited by: 22
Author(s): Claire Bridel, Torsten Hoffmann, Antje Meyer, Sisi Durieux, Marleen A. Koel-Simmelink, Matthias Orth, Philip Scheltens, Inge Lues, Charlotte E. Teunissen
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0200630

Missing single nucleotide polymorphisms in Genetic Risk Scores: A simulation study
Cited by: 7
Author(s): Miguel Chagnon, Jennifer O’Loughlin, James C. Engert, Igor Karp, Marie‐Pierre Sylvestre
Software Mentions: 3
Published: over 6 years ago

10.3389/fcimb.2021.734561

Insight Into the Potential Value of Gut Microbial Signatures for Prediction of Gestational Anemia
Cited by: 4
Author(s): Hongcheng Wei, Siting Deng, Yufeng Qin, Yang Xu, Ting Chen, Xu Wang, Yankai Xia
Software Mentions: 3
Published: over 3 years ago

10.3389/fmicb.2021.650567

The Evaluation and Validation of Blood-Derived Novel Biomarkers for Precise and Rapid Diagnosis of Tuberculosis in Areas With High-TB Burden
Cited by: 6
Author(s): Zhen Gong, Yinzhong Gu, Kunlong Xiong, Jinxia Niu, Ruijuan Zheng, Bo Su, Lin Fan, Jingwei Xie
Software Mentions: 3
Published: over 3 years ago

10.3389/fcimb.2020.00342

Fecal Microbiomes Distinguish Patients With Autoimmune Hepatitis From Healthy Individuals
Cited by: 31
Author(s): Jiamin Lou, Yan Jiang, Benchen Rao, Ang Li, Shuzhe Ding, Hang Yan, Hao Zhou, Zhenguo Liu, Qingmiao Shi, Guangying Cui, Zujiang Yu, Zhigang Ren
Software Mentions: 3
Published: over 4 years ago

10.3390/ijms17060886

Gene Set-Based Functionome Analysis of Pathogenesis in Epithelial Ovarian Serous Carcinoma and the Molecular Features in Different FIGO Stages
Cited by: 10
Author(s): Chia Ming Chang, Chi Mu Chuang, Mong‐Lien Wang, Ming Yang, Chi-Ching Chang, Ming Shyen Yen, Shih Hwa Chiou
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2019.01518

Fecal Microbiome Data Distinguish Liver Recipients With Normal and Abnormal Liver Function From Healthy Controls
Cited by: 18
Author(s): Haifeng Lü, Zhigang Ren, Ang Li, Hua Zhang, Shaoyan Xu, Jianwen Jiang, Lin Zhou, Qi Ling, Baohong Wang, Guangying Cui, Xinhua Chen, Shusen Zheng
Software Mentions: 3
Published: over 5 years ago

10.3389/fcimb.2021.656674

Oral Microbiome Characteristics in Patients With Autoimmune Hepatitis
Cited by: 11
Author(s): Benchen Rao, Jiamin Lou, Haifeng Lü, Hongxia Liang, Juan Li, Hao Zhou, Yijun Fan, Hua Zhang, Ying Sun, Yawen Zou, Zhongwen Wang, Yan Jiang, Zhigang Ren, Zujiang Yu
Software Mentions: 3
Published: over 3 years ago

10.3389/fcell.2021.663001

The Expression Patterns and Prognostic Value of the Proteasome Activator Subunit Gene Family in Gastric Cancer Based on Integrated Analysis
Cited by: 6
Author(s): Yongdong Guo, Xiao-Ping Dong, Jing Jin, Yutong He
Software Mentions: 3
Published: over 3 years ago

10.7554/eLife.13323

NIH peer review percentile scores are poorly predictive of grant productivity
Cited by: 69
Author(s): Ferric C. Fang, Anthony Bowen, Arturo Casadevall
Software Mentions: 3
Published: about 9 years ago

10.1371/journal.pone.0221227

Multilevel regression modeling for aneuploidy classification and physical separation of maternal cell contamination facilitates the QF-PCR based analysis of common fetal aneuploidies
Cited by: 4
Author(s): Predrag Noveski, Marija Terzic, Marija Vujović, Maja Kuzmanovska, Emilija Sukarova Stefanovska, Dijana Plaseska‐Karanfilska
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0165043

Recreational Use of the Countryside: No Evidence that High Nature Value Enhances a Key Ecosystem Service
Cited by: 14
Author(s): Karen Hornigold, Iain R. Lake, Paul M. Dolman
Software Mentions: 3
Published: over 8 years ago

10.3390/cancers11091293

A Radiogenomic Approach for Decoding Molecular Mechanisms Underlying Tumor Progression in Prostate Cancer
Cited by: 17
Author(s): Sarah Fischer, Mohamed Tahoun, Bastian Klaan, Kolja M. Thierfelder, Marc‐André Weber, Bernd J. Krause, Oliver W. Hakenberg, Georg Fuellen, Mohamed Hamed
Software Mentions: 3
Published: over 5 years ago

10.3389/fcvm.2020.571227

Development and Validation of a New Clinical Prediction Model of Catheter-Related Thrombosis Based on Vascular Ultrasound Diagnosis in Cancer Patients
Cited by: 4
Author(s): Binliang Liu, Junying Xie, Xiaoying Sun, Yanfeng Wang, Zuyi Yuan, Xiyu Liu, Zhou Huang, Jiani Wang, Hongnan Mo, Zongbi Yi, Xiuwen Guan, Lixi Li, Wenna Wang, Hong Li, Fei Ma, Yi‐Xin Zeng
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0157345

Oncologic Safety of Robot Thyroid Surgery for Papillary Thyroid Carcinoma: A Comparative Study of Robot versus Open Thyroid Surgery Using Inverse Probability of Treatment Weighting
Cited by: 10
Author(s): Tae‐Yon Sung, Jong Ho Yoon, Minkyu Han, Yi Ho Lee, Yu‐Mi Lee, Dong Eun Song, Ki-Wook Chung, Won Kim, Young Kee Shong, Suck Joon Hong
Software Mentions: 3
Published: over 8 years ago

10.1016/j.agsy.2017.05.009

Mapping regional risks from climate change for rainfed rice cultivation in India
Cited by: 41
Author(s): K. K. Singh, Colin J. McClean, Patrick Büker, Susan Hartley, Jane K. Hill
Software Mentions: 3
Published: over 7 years ago

10.3389/fbioe.2015.00023

Analytical Methods in Untargeted Metabolomics: State of the Art in 2015
Cited by: 465
Author(s): Arnald Alonso, Sara Marsal, Antonio Julià
Software Mentions: 3
Published: almost 10 years ago

10.3389/fmicb.2016.00949

Prediction of Biofilm Inhibiting Peptides: An In silico Approach
Cited by: 38
Author(s): Sudheer Gupta, Ashok Sharma, Shubham K. Jaiswal, Vineet K. Sharma
Software Mentions: 3
Published: over 8 years ago

10.7554/eLife.50240

Adjusting for age improves identification of gut microbiome alterations in multiple diseases
Cited by: 100
Author(s): Tarini Shankar Ghosh, Mrinmoy Das, Ian B. Jeffery, Paul W. O’Toole
Software Mentions: 3
Published: almost 5 years ago

10.3389/fped.2021.688272

A Novel Framework for Phenotyping Children With Suspected or Confirmed Infection for Future Biomarker Studies
Cited by: 22
Author(s): Ruud Nijman, Rianne Oostenbrink, Henriëtte A. Moll, Climent Casals-Pascual, Ulrich von Both, Aubrey Cunnington, Tisham De, Irini Eleftheriou, Marieke Emonts, Colin G. Fink, Michiel van der Flier, Ronald de Groot, Myrsini Kaforou, Benno Kohlmaier, Taco W. Kuijpers, Emma Lim, Ian Maconochie, Stéphane Paulus, Federico Martinón‐Torres, Marko Pokorn, Sam Romaine, Irene Rivero‐Calle, Luregn J. Schlapbach, Frank J Smit, Μαρία Τσολιά, Effua Usuf, Victoria J. Wright, Shunmay Yeung, Dace Zavadska, Werner Zenz, Michael Levin, Jethro Herberg, Enitan D. Carrol
Software Mentions: 3
Published: over 3 years ago

10.1186/s12891-021-03958-7

HEMGN and SLC2A1 might be potential diagnostic biomarkers of steroid-induced osteonecrosis of femoral head: study based on WGCNA and DEGs screening
Cited by: 10
Author(s): Zhixin Wu, Yinxian Wen, Guanlan Fan, Hangyuan He, Siqi Zhou, Liaobin Chen
Software Mentions: 3
Published: about 4 years ago

10.3389/fnagi.2021.675016

Multi-Racial Normative Data for Lobar and Subcortical Brain Volumes in Old Age: Korean and Caucasian Norms May Be Incompatible With Each Other†
Cited by: 4
Author(s): Yu Yong Choi, Jang Jae Lee, Kyu Yeong Choi, Uk-Su Choi, Eun Hyun Seo, Il Han Choo, Hoowon Kim, Minkyung Song, Seong-Min Choi, Soo Hyun Cho, Youngshik Choe, Byeong C. Kim, Kun Ho Lee
Software Mentions: 3
Published: over 3 years ago

10.1002/2211-5463.12694

Alterations in the human gut microbiome associated with <i>Helicobacter pylori</i> infection
Cited by: 29
Author(s): Daoming Wang, Yan Li, Zhong Huang, Qiuxia Ding, Yuxiang Lin, Shanmei Tang, Yang Zong, Qi Wang, Xiuqing Zhang, Huanming Yang, Rong Wang, Xiao Liu
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2021.651033

Immune Landscape of Gastric Carcinoma Tumor Microenvironment Identifies a Peritoneal Relapse Relevant Immune Signature
Cited by: 12
Author(s): Chuang Zhang, Danni Li, Ruoxi Yu, Ce Li, Yujia Song, Xi Chen, Yibo Fan, Yunpeng Liu, Xiujuan Qu
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12879-021-05893-3

Accuracy of urine flow cytometry and urine test strip in predicting relevant bacteriuria in different patient populations
Cited by: 2
Author(s): Christian Gehringer, Axel Regeniter, Katharina Rentsch, Sarah Tschudin‐Sutter, Stefano Bassetti, Adrian Egli
Software Mentions: 3
Published: almost 4 years ago

10.18632/aging.103056

USP22 promotes development of lung adenocarcinoma through ubiquitination and immunosuppression
Cited by: 15
Author(s): Bing Han, Yue Sun, Dongdong Yang, Huijuan Zhang, Steven Mo, Xuesong Chen, Hui Lu, Xueyan Mao, Jing Hu
Software Mentions: 3
Published: almost 5 years ago

10.1002/2211-5463.12433

An integrated analysis of genome‐wide <scp>DNA</scp> methylation and gene expression data in hepatocellular carcinoma
Cited by: 32
Author(s): Xiaojiang Sun, Mingchun Wang, Fenghua Zhang, Xiao Kong
Software Mentions: 3
Published: over 6 years ago

10.3389/fimmu.2019.00071

Scoring System for Tumor-Infiltrating Lymphocytes and Its Prognostic Value for Gastric Cancer
Cited by: 99
Author(s): Da-Chuan Zhang, Wenting He, Chao Wu, Yan Tan, Yao He, Bin Xu, Lüjun Chen, Qing Li, Jingting Jiang
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0051748

Integrative Proteomics and Tissue Microarray Profiling Indicate the Association between Overexpressed Serum Proteins and Non-Small Cell Lung Cancer
Cited by: 59
Author(s): Yansheng Liu, Xiangyang Luo, Haichuan Hu, Rui Wang, Yihua Sun, Rong Zeng, Haiquan Chen
Software Mentions: 3
Published: about 12 years ago

10.1007/s00330-020-06859-w

Optic chiasm measurements may be useful markers of anterior optic pathway degeneration in neuromyelitis optica spectrum disorders
Cited by: 8
Author(s): Valentin Juenger, Graham Cooper, Claudia Chien, Meera Chikermane, Frederike Cosima Oertel, Hanna Zimmermann, Klemens Ruprecht, Sven Jarius, Nadja Siebert, Joseph Kuchling, Athina Papadopoulou, Susanna Asseyer, Judith Bellmann‐Strobl, Friedemann Paul, Alexander U. Brandt, Michael Scheel
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0113072

Identification of Allelic Heterogeneity at Type-2 Diabetes Loci and Impact on Prediction
Cited by: 7
Author(s): Yann C. Klimentidis, Jin Zhou, Nathan E. Wineinger
Software Mentions: 3
Published: over 10 years ago

10.1007/s00330-021-07910-0

Prediction of tumor response via a pretreatment MRI radiomics-based nomogram in HCC treated with TACE
Cited by: 47
Author(s): Chunli Kong, Zhongwei Zhao, Weiyue Chen, Xiuling Lv, Shu Gao, Miaoqing Ye, Jingjing Shen, Ying Xiao, Qiaoyou Weng, Wen Jian Weng, Shiji Fang, Minjiang Chen, Jianfei Tu, Jiansong Ji
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pntd.0004411

Disease Risk Perception and Safety Practices: A Survey of Australian Flying Fox Rehabilitators
Cited by: 6
Author(s): Cecilia A. Sánchez, Michelle L. Baker
Software Mentions: 3
Published: about 9 years ago

10.3390/jcm9061668

Using Machine Learning to Predict ICU Transfer in Hospitalized COVID-19 Patients
Cited by: 129
Author(s): Fu-Yuan Cheng, Himanshu Joshi, Pranai Tandon, Robert Freeman, David L. Reich, Madhu Mazumdar, Roopa Kohli‐Seth, Matthew A. Levin, Prem Timsina, Arash Kia
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pntd.0009579

Effect of habitat fragmentation on rural house invasion by sylvatic triatomines: A multiple landscape-scale approach
Cited by: 11
Author(s): Miriam Cardozo, Federico Gastón Fiad, Liliana Crocco, David Eladio Gorla
Software Mentions: 3
Published: over 3 years ago

10.1007/s00330-018-5961-6

Predictive value of pretreatment MRI texture analysis in patients with primary nasopharyngeal carcinoma
Cited by: 40
Author(s): Jiaji Mao, Fang Jin, Xiaohui Duan, Zehong Yang, Minghui Cao, Fang Zhang, Liejing Lu, Zhang Xiang, Xiaoyan Wu, Yue Ding, Jun Shen
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pcbi.1008960

Model guided trait-specific co-expression network estimation as a new perspective for identifying molecular interactions and pathways
Cited by: 1
Author(s): Juho A. J. Kontio, Tanja Pyhäjärvi, Mikko J. Sillanpää
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pcbi.1006483

A benchmark driven guide to binding site comparison: An exhaustive evaluation using tailor-made data sets (ProSPECCTs)
Cited by: 41
Author(s): Christiane Ehrt, Tobias Brinkjost, Oliver Koch
Software Mentions: 3
Published: over 6 years ago

10.7717/peerj.12197

Multiomics-based analyses of KPNA2 highlight its multiple potentials in hepatocellular carcinoma
Cited by: 3
Author(s): Jinzhong Zhang, Xiuzhi Zhang, Lingxiao Wang, Chunyan Kang, Ningning Li, Zhefeng Xiao, Liping Dai
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0158762

Predictors of Outcome in Traumatic Brain Injury: New Insight Using Receiver Operating Curve Indices and Bayesian Network Analysis
Cited by: 35
Author(s): Zsolt Zádor, Matthew Sperrin, Andrew T. King
Software Mentions: 3
Published: over 8 years ago

10.7717/peerj.3575

Identification of four prognostic LncRNAs for survival prediction of patients with hepatocellular carcinoma
Cited by: 44
Author(s): Zhonghao Wang, Qian Wu, Shu Feng, Yanhua Zhao, Chuanmin Tao
Software Mentions: 3
Published: over 7 years ago

10.1186/s12859-020-3439-4

Variant effect predictions capture some aspects of deep mutational scanning experiments
Cited by: 24
Author(s): Jonas Reeb, Theresa Wirth, Burkhard Rost
Software Mentions: 3
Published: almost 5 years ago

10.1186/s12859-016-1226-z

Improving sensitivity of linear regression-based cell type-specific differential expression deconvolution with per-gene vs. global significance threshold
Cited by: 10
Author(s): Edmund Glass, Mikhail G. Dozmorov
Software Mentions: 3
Published: over 8 years ago

10.1186/s12969-021-00527-z

Monitoring patients with juvenile idiopathic arthritis using health-related quality of life
Cited by: 5
Author(s): Martijn J. H. Doeleman, Sytze de Roock, Nathan Buijsse, Mark Klein, Gouke J. Bonsel, Vicki Seyfert-Margolis, Joost F. Swart, Nico Wulffraat
Software Mentions: 3
Published: almost 4 years ago

Projects: cran: pROC

Papers Mentioning pROC 1,740