10.1002/jrsm.1444

<scp>IPDmada</scp> : An R Shiny tool for analyzing and visualizing individual patient data meta‐analyses of diagnostic test accuracy
Cited by: 7
Author(s): Junfeng Wang, Willem R. Keusters, Lingzi Wen, Mariska Leeflang
Software Mentions: 5
Published: almost 6 years ago

10.1186/2197-425X-2-10

Reliability of the nitrogen washin-washout technique to assess end-expiratory lung volume at variable PEEP and tidal volumes
Cited by: 10
Author(s): Jean-Christophe Richard, Céline Pouzot, Alfredo Pinzón, J. S. Torres González, Maciej Orkisz, B. Neyran, Marcela Hernández Hoyos, F. Lávenne, Claude Guérin
Software Mentions: 5
Published: over 12 years ago

10.3389/fgene.2021.653209

Exploring the Imbalance of Periodontitis Immune System From the Cellular to Molecular Level
Cited by: 11
Author(s): Long-Fei He, Lijuan Liu, Ti Li, Deshu Zhuang, Jiayin Dai, Bo Wang, Liangjia Bi
Software Mentions: 5
Published: over 5 years ago

10.18632/aging.102131

Large-scale analysis reveals the specific clinical and immune features of CD155 in glioma
Cited by: 15
Author(s): Fangkun Liu, Jing Huang, Yuanyuan Xiong, Shuwang Li, Zhixiong Liu
Software Mentions: 5
Published: about 7 years ago

10.1038/s41598-019-43091-z

A new class of protein biomarkers based on subcellular distribution: application to a mouse liver cancer model
Cited by: 10
Author(s): Tatjana Sajic, Rodolfo Ciuffa, Vera Lemos, Pan Xu, Valentina Leone, Chen Li, Evan G. Williams, Georgios Makris, Amir Banaei‐Esfahani, Mathias Heikenwälder, Kristina Schoonjans, Ruedi Aebersold
Software Mentions: 5
Published: over 7 years ago

10.1002/acn3.50873

Agreement of amyloid PET and CSF biomarkers for Alzheimer's disease on Lumipulse
Cited by: 89
Author(s): Daniel Alcolea, Jordi Malé i Pegueroles, Laia Muñoz, Valle Camacho, Diego Alfonso López-Mora, Alejandro Fernández-León, Nathalie Le Bastard, Els Huyck, Alícia Nadal, Verónica Olmedo, Frederic Sampedro, Víctor Montal, Eduard Vilaplana, Jordi Clarimón, Rafael Blesa, Juan Fortea, Alberto Lleó
Software Mentions: 5
Published: almost 7 years ago

10.3390/ijerph17186449

Comparison of Support Vector Machine, Naïve Bayes and Logistic Regression for Assessing the Necessity for Coronary Angiography
Cited by: 18
Author(s): Parastoo Golpour, Majid Ghayour‐Mobarhan, Azadeh Saki, Habibollah Esmaily, Ali Taghipour, Mohammad Tajfard, Hamideh Ghazizadeh, Mohsen Moohebati, Gordon A. Ferns
Software Mentions: 5
Published: almost 6 years ago

10.1155/2020/8047146

A Novel Schizophrenia Diagnostic Model Based on Statistically Significant Changes in Gene Methylation in Specific Brain Regions
Cited by: 3
Author(s): Donghua Zou, Yufen Qiu, Rongjie Li, Youshi Meng, Yuan Wu
Software Mentions: 4
Published: over 6 years ago

10.1038/srep20759

Comparative transcriptome analysis of peripheral blood mononuclear cells in hepatitis B-related acute-on-chronic liver failure
Cited by: 10
Author(s): Qian Zhou, Wenchao Ding, Liangliang Jiang, Jiaojiao Xin, Tianzhou Wu, Dongyan Shi, Jing Jiang, Cao H, Lanjuan Li, Jun Li
Software Mentions: 4
Published: over 10 years ago

10.1155/2019/3869825

A Novel Clinical Six-Flavoprotein-Gene Signature Predicts Prognosis in Esophageal Squamous Cell Carcinoma
Cited by: 6
Author(s): Peng Liu, Jincheng Guo, Li-Wen Lin, Feng Pan, Jian Zhao, Li–Yan Xu, En‐Min Li
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pmed.1002683

Variable generalization performance of a deep learning model to detect pneumonia in chest radiographs: A cross-sectional study
Cited by: 809
Author(s): John R. Zech, Marcus A. Badgeley, Manway Liu, Anthony Costa, J. Titano, Eric K. Oermann
Software Mentions: 4
Published: almost 8 years ago

10.1038/srep14174

A multi-platform metabolomics approach identifies highly specific biomarkers of bacterial diversity in the vagina of pregnant and non-pregnant women
Cited by: 97
Author(s): Amy McMillan, Stephen Rulisa, Mark W. Sumarah, Jean M. Macklaim, Justin B. Renaud, Jordan E. Bisanz, Gregory B. Gloor, Gregor Reid
Software Mentions: 4
Published: almost 11 years ago

10.1371/journal.pmed.1003111

Preoperative risk stratification in endometrial cancer (ENDORISK) by a Bayesian network model: A development and validation study
Cited by: 22
Author(s): Casper Reijnen, Evangelia Gogou, Nicole C.M. Visser, Hilde Engerud, Jordache Ramjith, Louis J.M. van der Putten, Koen K. Van de Vijver, Marı́a Santacana, Peter Bronsert, Johan Bulten, Marc Hirschfeld, Eva Colás, Antonio Gil‐Moreno, Armando Reques, Gemma Mancebo, Camilla Krakstad, Jone Trovik, Ingfrid Salvesen Haldorsen, Jutta Huvila, Martin Koskas, Vít Weinberger, Markéta Bednaříková, Jitka Hausnerová, A.A.M. van der Wurff, Xavier Matías‐Guiu, Frédéric Amant, Leon F.A.G. Massuger, Marc P.L.M. Snijders, Heidi V.N. Küsters‐Vandevelde, Peter Lucas, Johanna M.A. Pijnenborg
Software Mentions: 4
Published: over 6 years ago

10.1186/s13040-018-0171-y

Connecting genetics and gene expression data for target prioritisation and drug repositioning
Cited by: 20
Author(s): Enrico Ferrero, Pankaj Agarwal
Software Mentions: 4
Published: about 8 years ago

10.1155/2020/1712604

Machine Learning Based on a Multiparametric and Multiregional Radiomics Signature Predicts Radiotherapeutic Response in Patients with Glioblastoma
Cited by: 11
Author(s): Ziqi Pan, Shujun Zhang, Xianglian Wang, Yang Jiao, Jianjian Qiu
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pgen.1009392

Genome-wide association study of resistance to Mycobacterium tuberculosis infection identifies a locus at 10q26.2 in three distinct populations
Cited by: 14
Author(s): Jocelyn Quistrebert, Marianna Orlova, Gaspard Kerner, Le Thi Ton, Nguyễn Trong Luong, Nguyễn Thanh Danh, Quentin B. Vincent, Fabienne Jabot‐Hanin, Yoann Seeleuthner, Jacinta Bustamante, Stéphanie Boisson‐Dupuis, Nguyễn Thu Hương, Nguyen Ngoc Ba, Jean‐Laurent Casanova, Christophe Delacourt, Eileen G. Hoal, Alexandre Alcaïs, Vu Hong Thai, Lai The Thành, Laurent Abel, Erwin Schurr, Aurélie Cobat
Software Mentions: 4
Published: over 5 years ago

10.1007/s11547-021-01370-8

CT radiomic models to distinguish COVID-19 pneumonia from other interstitial pneumonias
Cited by: 18
Author(s): Nicolò Cardobi, Giulio Benetti, Giuseppe Cardano, Cinzia Arena, Claudio Micheletto, Carlo Cavedon, Stefania Montemezzi
Software Mentions: 4
Published: about 5 years ago

10.1038/srep32585

A Nomogram for Predicting the Pathological Response of Axillary Lymph Node Metastasis in Breast Cancer Patients
Cited by: 21
Author(s): Xi Jin, Yi Jiang, Sheng Chen, Zhi Ming Shao, Gen-Hong Di
Software Mentions: 4
Published: almost 10 years ago

10.1371/journal.ppat.1009773

CXCL1: A new diagnostic biomarker for human tuberculosis discovered using Diversity Outbred mice
Cited by: 15
Author(s): Deniz Koyuncu, M. Khalid Khan Niazi, Thomas E. Tavolara, Claudia Abeijón, Melanie Ginese, Yanghui Liao, Carolyn Mark, Aubrey G. Specht, Adam C. Gower, Blanca I. Restrepo, Daniel M. Gatti, Igor Kramnik, Metin N. Gürcan, Bülent Yener, Gillian Beamer
Software Mentions: 4
Published: about 5 years ago

10.1007/s10877-021-00709-w

Is lung ultrasound score a useful tool to monitoring and handling moderate and severe COVID-19 patients in the general ward? An observational pilot study
Cited by: 4
Author(s): Marco Baciarello, Andrea Bonetti, Luigi Vetrugno, Francesco Saturno, Antonio Nouvenne, Valentina Bellini, Tiziana Meschi, Elena Bignami
Software Mentions: 4
Published: over 5 years ago

10.18632/aging.202153

Upregulation of KIF20A promotes tumor proliferation and invasion in renal clear cell carcinoma and is associated with adverse clinical outcome
Cited by: 30
Author(s): Xiaohan Ren, Xinglin Chen, Yisheng Ji, Liang-In Lin, Yunxin Li, Chao Qin, Kai Fang
Software Mentions: 4
Published: over 5 years ago

10.3390/jcm9082384

Skin Phototype Could Be a Risk Factor for Multiple Sclerosis
Cited by: 0
Author(s): Isaac Hurtado-Guerrero, Isaac Hurtado-Guerrero, Miguel Ángel Hernández, Begoña Oliver-Martos, Celia Oreja‐Guevara, Jesús Ortega-Pinazo, Ana Alonso, Francisco Javier Barón-López, Laura Leyva, Óscar Fernández, María Jesús Pinto-Medel
Software Mentions: 4
Published: about 6 years ago

10.7717/peerj.3632

Maxent-directed field surveys identify new populations of narrowly endemic habitat specialists
Cited by: 62
Author(s): Cody M. Rhoden, William E. Peterman, Christopher A. Taylor
Software Mentions: 4
Published: about 9 years ago

10.1186/s12885-016-2652-z

A nomogram for predicting pathological complete response in patients with human epidermal growth factor receptor 2 negative breast cancer
Cited by: 9
Author(s): Xi Jin, Yi Jiang, Sheng Chen, Ke Yu, Ding Ma, Wei Sun, Zhi Min Shao, Gen Hong Di
Software Mentions: 4
Published: about 10 years ago

10.1155/2019/1571045

A Circulating miRNA-Based Scoring System Established by WGCNA to Predict Colon Cancer
Cited by: 2
Author(s): Dashan Qin, Rui Wei, Si Liu, Shoumin Zhu, Shutian Zhang, Li Min
Software Mentions: 4
Published: over 6 years ago

10.1186/s12893-020-00969-4

A novel nomogram for predicting liver metastasis in patients with gastrointestinal stromal tumor: a SEER-based study
Cited by: 8
Author(s): Guowei Zhou, Keshuai Xiao, Guanwen Gong, Jiabao Wu, Ya Zhang, Xinxin Liu, Zhiwei Jiang, Chaoqun Ma
Software Mentions: 4
Published: over 5 years ago

10.1186/s12969-020-00480-3

Onset age is a risk factor for refractory pediatric IgA vasculitis: a retrospective cohort study
Cited by: 9
Author(s): Calvin C.Y. Liao, Ming-Hsien Tsai, Yao‐Hsu Yang, Bor‐Luen Chiang, Li‐Chieh Wang
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-018-25698-w

Live-cell imaging of nuclear–chromosomal dynamics in bovine in vitro fertilised embryos
Cited by: 21
Author(s): Tatsuma Yao, Rie Suzuki, Natsuki Furuta, Yuka Suzuki, Kyoko Kabe, Mikiko Tokoro, Atsushi Sugawara, Akira Yajima, Tomohiro Nagasawa, S. Matoba, Kazuya Yamagata, Satoshi Sugimura
Software Mentions: 4
Published: over 8 years ago

10.3390/jcm8010019

Optimizing Detection of Kidney Transplant Injury by Assessment of Donor-Derived Cell-Free DNA via Massively Multiplex PCR
Cited by: 118
Author(s): Tara K. Sigdel, Felipe Acosta Archila, T Constantin, Sarah A. Prins, Juliane Liberto, Izabella Damm, Parhom Towfighi, Samantha Navarro, Eser Kırkızlar, Allison Ryan, Styrmir Sigurjonsson, Reuben D. Sarwal, Szu-Chuan Hseish, Chitranon Chan-on, Bernhard Zimmermann, Paul R. Billings, Solomon Moshkevich, Minnie M. Sarwal
Software Mentions: 4
Published: over 7 years ago

10.3389/fnagi.2017.00013

MRI-Based Classification Models in Prediction of Mild Cognitive Impairment and Dementia in Late-Life Depression
Cited by: 62
Author(s): Aleksandra Lebedeva, Eric Westman, Tom Borza, Mona K. Beyer, Knut Engedal, Dag Aarsland, Geir Selbæk, Asta Håberg
Software Mentions: 4
Published: over 9 years ago

10.1016/j.ahj.2016.10.020

Inadequacy of existing clinical prediction models for predicting mortality after transcatheter aortic valve implantation
Cited by: 41
Author(s): Glen P. Martin, Matthew Sperrin, Peter Ludman, Mark de Belder, Chris P Gale, William D. Toff, Neil Moat, Uday Trivedi, Iain Buchan, Mamas A. Mamas
Software Mentions: 4
Published: over 9 years ago

10.1186/s13071-021-04780-9

Spatio-temporal modelling of Culicoides Latreille (Diptera: Ceratopogonidae) populations on Reunion Island (Indian Ocean)
Cited by: 0
Author(s): Yannick Grimaud, Annelise Tran, Samuel Benkimoun, Floriane Boucher, Olivier Esnault, Catherine Cêtre-Sossah, Éric Cardinale, Claire Garros, Hélène Guis
Software Mentions: 4
Published: about 5 years ago

10.1111/jcmm.16818

The role of YTH domain containing 2 in epigenetic modification and immune infiltration of pan‐cancer
Cited by: 16
Author(s): Chiyuan Zhang, Cuishan Guo, Yan Li, Liang Ouyang, Qi Zhao, Kuiran Liu
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0109291

Systematic Analysis of Blood Cell Transcriptome in End-Stage Chronic Respiratory Diseases
Cited by: 28
Author(s): Julie Chesné, Richard Danger, K. Botturi, Martine Reynaud‐Gaubert, Sacha Mussot, M. Stern, Isabelle Danner-Boucher, Jean‐François Mornex, Christophe Pison, C. Dromer, Romain Kessler, Marcel Dahan, Olivier Brugière, Jérôme Le Pavec, Frédèric Perros, Marc Humbert, Carine Gomez, Sophie Brouard, A. Magnan
Software Mentions: 4
Published: almost 12 years ago

10.1155/2016/3159617

The Difference between the Two Representative Kampo Formulas for Treating Dysmenorrhea: An Observational Study
Cited by: 15
Author(s): Tetsuhiro Yoshino, Kotoe Katayama, Yuko Horiba, Kaori Munakata, Rui Yamaguchi, Seiya Imoto, Satoru Miyano, Hideki Mima, Kenji Watanabe, Masaru Mimura
Software Mentions: 4
Published: over 10 years ago

10.1007/s00432-020-03200-2

Survival prediction for patients with non-resectable intrahepatic cholangiocarcinoma undergoing chemotherapy: a retrospective analysis comparing the tumor marker CA 19-9 with cross-sectional imaging
Cited by: 9
Author(s): Felix Hähn, Lukáš Müller, Florian Jungmann, Aline Mähringer‐Kunz, Yasemin Tanyildizi, Christoph Düber, Peter R. Galle, Arndt Weinmann, Roman Kloeckner
Software Mentions: 4
Published: over 6 years ago

10.1183/13993003.03201-2020

Plasma metabolomics exhibit response to therapy in chronic thromboembolic pulmonary hypertension
Cited by: 23
Author(s): Emilia M. Swietlik, Pavandeep Ghataorhe, Kasia Zalewska, John Wharton, Luke Howard, Dolores Taboada, John Cannon, Nicholas W. Morrell, Martin R. Wilkins, Mark Toshner, Joanna Pepke‐Zaba, Christopher J. Rhodes
Software Mentions: 4
Published: almost 6 years ago

10.1186/1749-8090-7-87

Atrial fibrillation following cardiac surgery: risk analysis and long-term survival
Cited by: 119
Author(s): Sólveig Helgadóttir, Martin I. Sigurdsson, Inga Lára Ingvarsdóttir, Davíð O. Arnar, Tómas Guðbjartsson
Software Mentions: 4
Published: almost 14 years ago

10.1002/jcb.29128

NCF2, MYO1F, S1PR4, and FCN1 as potential noninvasive diagnostic biomarkers in patients with obstructive coronary artery: A weighted gene co‐expression network analysis
Cited by: 24
Author(s): Xiangang Mo, Wei Liu, Yunan Yang, Saber Imani, Shan Lu, Guorong Dan, Xuqiang Nie, Jun Yan, Rong Zhan, Xiaohui Li, Youcai Deng, Bingbo Chen, Yuchen Cai
Software Mentions: 4
Published: about 7 years ago

10.1186/s40462-015-0033-x

Foraging ecology of three sympatric ungulate species – Behavioural and resource maps indicate differences between chamois, ibex and red deer
Cited by: 28
Author(s): Anna K. Schweiger, Martin Schütz, Pia Anderwald, Michael E. Schaepman, Mathias Kneubühler, Rudolf Haller, Anita C. Risch
Software Mentions: 4
Published: over 11 years ago

10.1161/JAHA.118.008935

Extracellular Fluid Excess Is Significantly Associated With Coronary Artery Calcification in Patients With Chronic Kidney Disease
Cited by: 22
Author(s): Seohyun Park, Sungha Park, Jong Hyun Jhee, Hae‐Ryong Yun, Hyoungnae Kim, Su Young Jung, Youn Kyung Kee, Chang Yun Yoon, Sun-Hee Park, Hyeon Chang Kim, Seung Hyeok Han, Shin Wook Kang, Sungha Park, Tae Hyun Yoo
Software Mentions: 4
Published: about 8 years ago

10.3233/JAD-200445

Cognitive, Genetic, Brain Volume, and Diffusion Tensor Imaging Markers as Early Indicators of Dementia
Cited by: 4
Author(s): Theresa Müller, Nicola Maria Payton, Grégoria Kalpouzos, Frank Jessen, Giulia Grande, Lars Bäckman, Erika J. Laukka
Software Mentions: 4
Published: almost 6 years ago

10.1002/1878-0261.12158

Prognostic value of an immunohistochemical signature in patients with esophageal squamous cell carcinoma undergoing radical esophagectomy
Cited by: 20
Author(s): Meng Ji, Junhua Zhang, Yingjie Xiu, Yan Jin, Jiaqing Xiang, Yongzhan Nie, Shihua Fu, Kuaile Zhao
Software Mentions: 4
Published: over 8 years ago

10.1186/1471-2369-15-60

A prediction model for renal artery stenosis using carotid ultrasonography measurements in patients undergoing coronary angiography
Cited by: 17
Author(s): Yong-Gu Lee, Jeong‐Hun Shin, Hwan Cheol Park, Soon Gil Kim, Sung Il Choi
Software Mentions: 4
Published: over 12 years ago

10.1002/mgg3.214

Computational assessment of feature combinations for pathogenic variant prediction
Cited by: 12
Author(s): Eva König, Johannes Michael Rainer, Francisco S. Domingues
Software Mentions: 4
Published: over 10 years ago

10.3390/molecules24101973

ACPred: A Computational Tool for the Prediction and Analysis of Anticancer Peptides
Cited by: 109
Author(s): Nalini Schaduangrat, Chanin Nantasenamat, Virapong Prachayasittikul, Watshara Shoombuatong
Software Mentions: 4
Published: about 7 years ago

10.3389/fgene.2019.00232

Central and Peripheral Changes in FOS Expression in Schizophrenia Based on Genome-Wide Gene Expression
Cited by: 10
Author(s): Jing Huang, Fangkun Liu, Bolun Wang, Hui Tang, Ziwei Teng, Lehua Li, Yan Qiu, Haishan Wu, Jindong Chen
Software Mentions: 4
Published: over 7 years ago

10.3390/cancers12082003

Methylation Patterns and Chromatin Accessibility in Neuroendocrine Lung Cancer
Cited by: 5
Author(s): Elsa Arbajian, Mattias Aine, Anna Karlsson, Johan Vallon‐Christersson, Hans Brunnström, Josef Davidsson, Sofie Mohlin, Maria Planck, Johan Staaf
Software Mentions: 4
Published: about 6 years ago

10.1016/j.jalz.2019.03.007

Inflammatory biomarkers in Alzheimer's disease plasma
Cited by: 118
Author(s): Angharad R. Morgan, Samuel Touchard, Claire Leckey, Caroline O’Hagan, Alejo J. Nevado‐Holgado, Frederik Barkhof, Lars Bertram, Olivier Blin, Isabelle Bos, Valerija Dobričić, Sebastiaan Engelborghs, Giovanni B. Frisoni, Lutz Frölich, Silvey Gabel, Peter Johannsen, Petronella Kettunen, Iwona Kłoszewska, Cristina Legido‐Quigley, Alberto Lleó, Pablo Martínez-Lage, Patrizia Mecocci, Karen Meersmans, José Luís Molinuevo, Gwendoline Peyratout, Julius Popp, Jill C. Richardson, Isabel Sala, Philip Scheltens, Johannes Streffer, Hikka Soininen, Mikel Tainta, Charlotte E. Teunissen, Magda Tsolaki, Rik Vandenberghe, Pieter Jelle Visser, Stephanie J.B. Vos, Lars‐Olof Wahlund, Anders Wallin, Sarah Westwood, Henrik Zetterberg, Simon Lovestone, B. Paul Morgan, Alzheimer’s Disease
Software Mentions: 4
Published: over 7 years ago

10.3390/microorganisms9020294

Potential Association between Vaginal Microbiota and Cervical Carcinogenesis in Korean Women: A Cohort Study
Cited by: 23
Author(s): Gi-Ung Kang, Da-Ryung Jung, Yoon Hee Lee, Se Young Jeon, Hyung Soo Han, Gun Oh Chong, Jae‐Ho Shin
Software Mentions: 4
Published: over 5 years ago

10.1186/s40168-018-0515-3

Breast cancer in postmenopausal women is associated with an altered gut metagenome
Cited by: 157
Author(s): Jia Zhu, Ming Liao, Ziting Yao, Wenying Liang, Qibin Li, Jianlun Liu, Huawei Yang, Yinan Ji, Wei Wei, Aihua Tan, Sai Liang, Yang Chen, Haisong Lin, Xinyuan Zhu, Shengzhu Huang, Jiarong Tian, Rongjiang Tang, Qiuyan Wang, Zengnan Mo
Software Mentions: 4
Published: about 8 years ago

10.1186/s12891-021-04414-2

Risk analysis of pulmonary metastasis of chondrosarcoma by establishing and validating a new clinical prediction model: a clinical study based on SEER database
Cited by: 16
Author(s): Wenle Li, Shengtao Dong, Haosheng Wang, Rilige Wu, Huitao Wu, Zhi-Ri Tang, Junyan Zhang, Zhaohui Hu, Chengliang Yin
Software Mentions: 4
Published: about 5 years ago

10.1186/s12866-021-02182-6

Potential of fecal microbiota for detection and postoperative surveillance of colorectal cancer
Cited by: 9
Author(s): Qizheng Yao, Meifang Tang, Liuhong Zeng, Zhonghua Chu, Hui Sheng, Yuyu Zhang, Yuan Zhou, Hongyun Zhang, Huayan Jiang, Mingzhi Ye
Software Mentions: 4
Published: about 5 years ago

10.1186/s12859-021-04235-z

Putative markers for the detection of early-stage bladder cancer selected by urine metabolomics
Cited by: 11
Author(s): Jia You Lin, Bao Rong Juo, Yu Hsuan Yeh, Shu Hsuan Fu, Yi Ting Chen, Chien Lun Chen, Kun Wu
Software Mentions: 4
Published: about 5 years ago

10.1007/s11306-020-1646-7

Identification to species level of live single microalgal cells from plankton samples with matrix-free laser/desorption ionization mass spectrometry
Cited by: 13
Author(s): Tim U. H. Baumeister, Marine Vallet, Filip Kaftan, Laure Guillou, Aleš Svatoš, Georg Pohnert
Software Mentions: 4
Published: over 6 years ago

10.1007/s11306-020-01750-7

SUMMER, a shiny utility for metabolomics and multiomics exploratory research
Cited by: 3
Author(s): Ling Huang, António Currais, Maxim N. Shokhirev
Software Mentions: 4
Published: over 5 years ago

10.1186/s12874-016-0277-1

Clinical prediction in defined populations: a simulation study investigating when and how to aggregate existing models
Cited by: 21
Author(s): Glen P. Martin, Mamas A. Mamas, Niels Peek, Iain Buchan, Matthew Sperrin
Software Mentions: 4
Published: over 9 years ago

10.1186/s12955-021-01736-6

Validation of the Portuguese version of Amsterdam Preoperative Anxiety and Information Scale (APAIS)
Cited by: 6
Author(s): Sandra Maurício, Isabel Rebêlo, Catarina Madeira, Filipa Resende, Susana Esteves
Software Mentions: 4
Published: over 5 years ago

10.1093/gigascience/gix058

Connections between the human gut microbiome and gestational diabetes mellitus
Cited by: 178
Author(s): Yashu Kuang, Jinhua Lu, Shenghui Li, Junhua Li, Mingyang Yuan, Jianxing He, Niannian Chen, Wan-Qing Xiao, Shi‐Li Shen, Lan Qiu, Yongming Wu, Cui-Yue Hu, Yanyan Wu, Weidong Li, Qiaozhu Chen, Hong‐Wen Deng, Christopher J. Papasian, Huimin Xia, Xiu Qiu
Software Mentions: 4
Published: about 9 years ago

10.1186/1471-2288-13-62

Predicting hemoglobin levels in whole blood donors using transition models and mixed effects models
Cited by: 14
Author(s): Kazem Nasserinejad, Wim de Kort, M. L. Baart, Arnošt Komárek, Joost van Rosmalen, Emmanuel Lesaffre
Software Mentions: 4
Published: over 13 years ago

10.3390/cancers13112568

Radiomic Based Machine Learning Performance for a Three Class Problem in Neuro-Oncology: Time to Test the Waters?
Cited by: 10
Author(s): Sarv Priya, Yanan Liu, Caitlin Ward, Nam Le, Neetu Soni, Ravishankar Pillenahalli Maheshwarappa, Varun Monga, Honghai Zhang, Milan Sonka, Girish Bathla
Software Mentions: 4
Published: about 5 years ago

10.18632/aging.202765

Pan-cancer analysis identifies ITIH1 as a novel prognostic indicator for hepatocellular carcinoma
Cited by: 7
Author(s): Q Q Chang, Ting Mao, Tao Yan, Tao Dong, Xuan-xuan Tang, Ge Gao, Zi‐jun Xu
Software Mentions: 4
Published: over 5 years ago

10.1038/s41437-020-00401-w

Neighbor GWAS: incorporating neighbor genotypic identity into genome-wide association studies of field herbivory
Cited by: 7
Author(s): Yasuhiro Sato, Eiji Yamamoto, Kentaro Shimizu, Atsushi J. Nagano
Software Mentions: 4
Published: over 5 years ago

10.1186/s12911-018-0702-y

Towards stroke prediction using electronic health records
Cited by: 21
Author(s): Douglas Teoh
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0226595

Development of a long non-coding RNA signature for prediction of response to neoadjuvant chemoradiotherapy in locally advanced rectal adenocarcinoma
Cited by: 15
Author(s): Lorenzo Ferrando, Gabriella Cirmena, Anna Garuti, Stefano Scabini, Federica Grillo, Luca Mastracci, Edoardo Isnaldi, C. Marrone, Roberta Gonella, Roberto Murialdo, Roberto Fiocca, Emanuele Romairone, Alberto Ballestrero, Gabriele Zoppoli
Software Mentions: 4
Published: over 6 years ago

10.1186/s13059-017-1203-5

Multi-tissue DNA methylation age predictor in mouse
Cited by: 307
Author(s): Thomas M. Stubbs, Marc Jan Bonder, Anne-Katrien Stark, Felix Krueger, Ferdinand von Meyenn, Oliver Stegle, Wolf Reik
Software Mentions: 4
Published: over 9 years ago

10.1371/journal.pone.0236982

Is short-term-variation of fetal-heart-rate a better predictor of fetal acidaemia in labour? A feasibility study
Cited by: 5
Author(s): Habiba Kapaya, Richard Jacques, Thomas Almond, Miss Hilary Rosser, Dilly Anumba
Software Mentions: 4
Published: about 6 years ago

10.1186/1475-2840-13-84

Impact of serum omentin-1 levels on cardiac prognosis in patients with heart failure
Cited by: 62
Author(s): Takatsune Narumi, Tetsu Watanabe, Shinpei Kadowaki, Daisuke Kinoshita, Masahiro Yokoyama, Yuki Honda, Yoichiro Otaki, Satoshi Nishiyama, Hiroki Takahashi, Takanori Arimoto, Tetsuro Shishido, Takuya Miyamoto, Isao Kubota
Software Mentions: 4
Published: over 12 years ago

10.18632/aging.202634

Long non-coding RNAs ENST00000429730.1 and MSTRG.93125.4 are associated with metabolic activity in tuberculosis lesions of sputum-negative tuberculosis patients
Cited by: 5
Author(s): Lin Wang, Wen Zhu, Hui Ma, Liwei Wu, Hui Chen, Yijun Zhu, Liangfei Niu, Qihang Wu, Hongwei Li, Lei Shi, Leilei Li, Leiyi Wan, Jun Wang, Ka-Wing Wong, Yanzheng Song
Software Mentions: 4
Published: over 5 years ago

10.7150/jca.44436

DNA methylation profiling to predict overall survival risk in gastric cancer: development and validation of a nomogram to optimize clinical management
Cited by: 7
Author(s): Xianxiong Ma, Hengyu Chen, Guobin Wang, Lei Li, Kaixiong Tao
Software Mentions: 4
Published: over 6 years ago

10.1186/s13059-017-1353-5

Evaluation of in silico algorithms for use with ACMG/AMP clinical variant interpretation guidelines
Cited by: 165
Author(s): Rajarshi Ghosh, Ninad Oak, Sharon E. Plon
Software Mentions: 4
Published: over 8 years ago

10.1093/gastro/goaa069

Nomogram to predict primary non-response to infliximab in patients with Crohn’s disease: a multicenter study
Cited by: 3
Author(s): Xiao-Qi Ye, Jing Cai, Qiao Yu, Xiaocang Cao, Yan Chen, M. K. Rao, Baili Chen, Yao He, Zhirong Zeng, Hao Chen, Yimou Lin, Qian Cao, Minhu Chen, Shenghong Zhang
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12880-019-0355-z

Computed tomography-based predictive nomogram for differentiating primary progressive pulmonary tuberculosis from community-acquired pneumonia in children
Cited by: 21
Author(s): Bei Wang, Min Li, He Ma, Fangfang Han, Yan Wang, Shunying Zhao, Zhimin Liu, Tao Yu, Jie Tian, Di Dong, Yun Peng
Software Mentions: 4
Published: about 7 years ago

10.1186/s12859-015-0846-z

Predicting transcription factor site occupancy using DNA sequence intrinsic and cell-type specific chromatin features
Cited by: 28
Author(s): Sunil Kumar, Philipp Bücher
Software Mentions: 4
Published: over 10 years ago

10.1186/s12880-021-00564-w

CT-based radiomics combined with signs: a valuable tool to help radiologist discriminate COVID-19 and influenza pneumonia
Cited by: 14
Author(s): Yurong Huang, Zhenguang Zhang, Siyun Liu, Xiang Li, Yaewon Yang, Jiyao Ma, Zhipeng Li, Jialong Zhou, Yuanming Jiang, Bo He
Software Mentions: 4
Published: over 5 years ago

10.1002/cam4.1666

The TERT promoter mutation status and MGMT promoter methylation status, combined with dichotomized MRI-derived and clinical features, predict adult primary glioblastoma survival
Cited by: 20
Author(s): Chang Shu, Qiong Wang, Xiaoqian Yan, Jinhuan Wang
Software Mentions: 4
Published: about 8 years ago

10.1007/s00262-020-02778-3

IL-10, IL-13, Eotaxin and IL-10/IL-6 ratio distinguish breast implant-associated anaplastic large-cell lymphoma from all types of benign late seromas
Cited by: 12
Author(s): Arianna Di Napoli, Daniele Greco, Giorgia Scafetta, Francesca Ascenzi, Alessandro Gulino, Luigi Aurisicchio, Fabio Santanelli di Pompeo, Adriana Bonifacino, Enrico Giarnieri, John Morgan, Rita Mancini, Marshall E. Kadin
Software Mentions: 4
Published: almost 6 years ago

10.1186/s40644-021-00395-6

Radiomic nomogram based on MRI to predict grade of branching type intraductal papillary mucinous neoplasms of the pancreas: a multicenter study
Cited by: 14
Author(s): Shuai Cui, Tianyu Tang, Qiuming Su, Yajie Wang, Zhenyu Shu, Wei Yang, Xiangyang Gong
Software Mentions: 4
Published: over 5 years ago

10.1186/s40644-019-0256-y

Radiogenomic analysis of vascular endothelial growth factor in patients with diffuse gliomas
Cited by: 19
Author(s): Zimin Sun, Yiming Li, Yinyan Wang, Xing Fan, Kaibin Xu, Kai Wang, Shaowu Li, Zhong Zhang, Tao Jiang, Xing Liu
Software Mentions: 4
Published: almost 7 years ago

10.18632/oncotarget.24468

Artificial neural network approach to predict surgical site infection after free-flap reconstruction in patients receiving surgery for head and neck cancer
Cited by: 31
Author(s): Pao‐Jen Kuo, Shao-Chun Wu, Peng‐Chen Chien, Shu-Shya Chang, Cheng-Shyuan Rau, Hsueh-Ling Tai, Shu-Hui Peng, Yi-Chien Lin, Yi‐Chun Chen, Hsiao-Yun Hsieh, Ching‐Hua Hsieh
Software Mentions: 4
Published: over 8 years ago

10.18632/oncotarget.26022

Metabolite quantification of faecal extracts from colorectal cancer patients and healthy controls
Cited by: 25
Author(s): Gwénaëlle Le Gall, Kiran Guttula, Lee Kellingray, Adrian Tett, Rogier ten Hoopen, E. Kate Kemsley, George M. Savva, Ashraf E.K. Ibrahim, Arjan Narbad
Software Mentions: 4
Published: almost 8 years ago

10.1186/s12935-020-01352-2

Co-expression network analysis identifies a gene signature as a predictive biomarker for energy metabolism in osteosarcoma
Cited by: 19
Author(s): Naiqiang Zhu, Jingyi Hou, Guiyun Ma, Shuai Guo, Chengliang Zhao, Bin Chen
Software Mentions: 4
Published: about 6 years ago

10.1155/2017/7210463

Comparison of Attenuated Total Reflectance Mid-Infrared, Near Infrared, and ¹H-Nuclear Magnetic Resonance Spectroscopies for the Determination of Coffee’s Geographical Origin
Cited by: 27
Author(s): Jéssica Medina, Diana Caro Rodríguez, Victoria A. Arana, Andrés Bernal, Pierre Esseiva, Julien Wist
Software Mentions: 4
Published: almost 9 years ago

10.3390/jpm11080772

Genetic Variants in PGE2 Receptors Modulate the Risk of Nephrosclerosis and Clinical Outcomes in These Patients
Cited by: 4
Author(s): Luz María González, Nicolás Roberto Robles, Sonia Mota-Zamorano, José M. Valdivielso, Juan M. López‐Gómez, Guillermo Gervasini
Software Mentions: 4
Published: about 5 years ago

10.1186/s12935-018-0681-1

Identification of RPL5 and RPL10 as novel diagnostic biomarkers of Atypical teratoid/rhabdoid tumors
Cited by: 6
Author(s): Yanming Ren, Chuanmin Tao, Xiliang Wang, Yan Ju
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0230796

Transcriptome analysis reveals gender-specific differences in overall metabolic response of male and female patients in lung adenocarcinoma
Cited by: 5
Author(s): Ya Li, Chenglu He, Wen‐Xing Li, Ruixian Zhang, Yong Duan
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0137782

Gene Ranking of RNA-Seq Data via Discriminant Non-Negative Matrix Factorization
Cited by: 23
Author(s): Zhilong Jia, Xiang Zhang, Naiyang Guan, Xiaochen Bo, Michael R. Barnes, Zhigang Luo
Software Mentions: 4
Published: almost 11 years ago

10.3390/ijms22010135

Circulating tRNA Fragments as a Novel Biomarker Class to Distinguish Acute Stroke Subtypes
Cited by: 13
Author(s): Thủy Nguyễn, M. Leontien van der Bent, Marieke J.H. Wermer, Ido R. van den Wijngaard, Erik W. van Zwet, Bas de Groot, Paul H.A. Quax, Nyika D. Kruyt, A. Yaël Nossent
Software Mentions: 4
Published: over 5 years ago

10.3390/ijms21155359

Small Extracellular Vesicles Isolated from Serum May Serve as Signal-Enhancers for the Monitoring of CNS Tumors
Cited by: 17
Author(s): Gabriella Dobra, Mátyás Bukva, Z. G. Szabó, Bella Bruszel, Mária Harmati, Edina Gyukity-Sebestyén, Adrienn Jenei, Mónika Szűcs, Péter Horváth, Tamás Bı́ró, Álmos Klekner, Krisztina Buzás
Software Mentions: 4
Published: about 6 years ago

10.3389/fmicb.2019.02874

Lifestyle-Induced Microbial Gradients: An Indian Perspective
Cited by: 6
Author(s): Rashmi Singh, Mohammed Monzoorul Haque, Sharmila S. Mande
Software Mentions: 4
Published: over 6 years ago

10.3390/ijms20122950

TargetAntiAngio: A Sequence-Based Tool for the Prediction and Analysis of Anti-Angiogenic Peptides
Cited by: 36
Author(s): Vishuda Laengsri, Chanin Nantasenamat, Nalini Schaduangrat, Pornlada Nuchnoi, Virapong Prachayasittikul, Watshara Shoombuatong
Software Mentions: 4
Published: about 7 years ago

10.1111/bpa.12595

Epigenomic signature of adrenoleukodystrophy predicts compromised oligodendrocyte differentiation
Cited by: 18
Author(s): Agatha Schlüter, Juan Sandoval, Stéphane Fourcade, Ángel Díaz‐Lagares, Montserrat Ruíz, Patrizia Casaccia, Manel Esteller, Aurora Pujol
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0180647

Assessment of circulating copy number variant detection for cancer screening
Cited by: 30
Author(s): Bhuvan Molparia, Eshaan Nichani, Ali Torkamani
Software Mentions: 4
Published: about 9 years ago

10.3390/ijms19102894

Inhibitory Effect of Methotrexate on Rheumatoid Arthritis Inflammation and Comprehensive Metabolomics Analysis Using Ultra-Performance Liquid Chromatography-Quadrupole Time of Flight-Mass Spectrometry (UPLC-Q/TOF-MS)
Cited by: 30
Author(s): Zhiqiang Pang, Guoqiang Wang, Nan Ran, Hongqiang Lin, Ziyan Wang, Xuewa Guan, Yuze Yuan, Keyong Fang, Jinping Liu, Fang Wang
Software Mentions: 4
Published: almost 8 years ago

10.1371/journal.pone.0052021

Prospective Transcriptomic Pathway Analysis of Human Lymphatic Vascular Insufficiency: Identification and Validation of a Circulating Biomarker Panel
Cited by: 46
Author(s): Shin Lin, Jeanna Kim, Mi-Joung Lee, Leslie Roche, Nancy L. Yang, Philip S. Tsao, Stanley G. Rockson
Software Mentions: 4
Published: over 13 years ago

10.1016/j.jmb.2014.04.026

SuSPect: Enhanced Prediction of Single Amino Acid Variant (SAV) Phenotype Using Network Features
Cited by: 181
Author(s): Christopher M. Yates, Ioannis Filippis, Lawrence A. Kelley, Michael J.E. Sternberg
Software Mentions: 4
Published: about 12 years ago

10.18632/aging.102835

The lncRNA ENSG00000254041.1 promotes cell invasiveness and associates with poor prognosis of pancreatic ductal adenocarcinoma
Cited by: 6
Author(s): Bin Chen, Qiqi Zhang, Xujing Wang, Yongkun Wang, Jiaqu Cui, Huiren Zhuang, Jianying Tang
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0094834

Association of Heart-Type Fatty Acid-Binding Protein with Cardiovascular Risk Factors and All-Cause Mortality in the General Population: The Takahata Study
Cited by: 37
Author(s): Yoichiro Otaki, Tetsu Watanabe, Hiroki Takahashi, A Hirayama, Takatsune Narumi, Shinpei Kadowaki, Yuki Honda, Takanori Arimoto, Tetsuro Shishido, Takuya Miyamoto, Tsuneo Konta, Yoko Shibata, Akira Fukao, Makoto Daimon, Yoshiyuki Ueno, Takeshi Kato, Takamasa Kayama, Isao Kubota
Software Mentions: 4
Published: about 12 years ago

10.3389/fimmu.2019.02985

TCR Convergence in Individuals Treated With Immune Checkpoint Inhibition for Cancer
Cited by: 29
Author(s): Timothy J. Looney, Denise Topacio-Hall, Geoffrey Lowman, Jeffrey M. Conroy, Carl Morrison, David Y. Oh, Lawrence Fong, Li Zhang
Software Mentions: 4
Published: over 6 years ago

10.3389/fimmu.2021.622216

Establishing a Risk Prediction Model for Atherosclerosis in Systemic Lupus Erythematosus
Cited by: 9
Author(s): Haiping Xing, Haiyu Pang, Tian Du, Xufei Yang, Jing Zhang, Mengtao Li, Shuyang Zhang
Software Mentions: 4
Published: over 5 years ago