Ecosyste.ms: Papers

10.1155/2021/6633442

The Construction and Comprehensive Analysis of Inflammation-Related ceRNA Networks and Tissue-Infiltrating Immune Cells in Ulcerative Colitis Progression
Cited by: 8
Author(s): Jiawei Lu, Aimaier Rouzigu, Li-Hong Teng, Weili Liu
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0257251

Potential biomarkers of major depression diagnosis and chronicity
Cited by: 10
Author(s): Ana Cecília de Menezes Galvão, Raíssa Nóbrega de Almeida, Geovan Menezes de Sousa Júnior, Mário André Leocádio-Miguel, Fernanda Palhano-Fontes, Dráulio Barros de Araújo, Bruno Lobão-Soares, João Paulo Maia‐de‐Oliveira, Emerson Arcoverde Nunes, Jaime Eduardo Cecílio Hallak, Jerome Sarris, Nicole Leite Galvão-Coelho
Software Mentions: 5
Published: about 3 years ago

10.1371/journal.pone.0255477

Changes and prognostic value of cardiopulmonary exercise testing parameters in elderly patients undergoing cardiac rehabilitation: The EU-CaRE observational study
Cited by: 2
Author(s): Thimo Marcin, Prisca Eser, Eva Prescott, Leonie F Prins, Evelien Kolkman, Wendy Bruins, Astrid E van der Velde, Carlos Peña-Gil, Marie‐Christine Iliou, Diego Ardissino, Uwe Zeymer, Esther P. Meindersma, Arnoud W.J. van’t Hof, Ed P de Kluiver, Matthias Wilhelm
Software Mentions: 5
Published: over 3 years ago

10.1186/s12879-018-3127-4

“Tuberculosis in advanced HIV infection is associated with increased expression of IFNγ and its downstream targets”
Cited by: 18
Author(s): Sheetal Verma, Peicheng Du, Damalie Nakanjako, Sabine Hermans, Jessica Briggs, Lydia Nakiyingi, Jerrold J. Ellner, Yukari C. Manabe, Padmini Salgame
Software Mentions: 5
Published: over 6 years ago

10.18632/aging.102131

Large-scale analysis reveals the specific clinical and immune features of CD155 in glioma
Cited by: 15
Author(s): Fangkun Liu, Jing Huang, Yuanyuan Xiong, Shuwang Li, Zhixiong Liu
Software Mentions: 5
Published: over 5 years ago

10.1093/braincomms/fcab084

Integrative biochemical, proteomics and metabolomics cerebrospinal fluid biomarkers predict clinical conversion to multiple sclerosis
Cited by: 13
Author(s): Fay Probert, Tianrong Yeo, Yifan Zhou, Megan Sealey, Siddharth Arora, Jacqueline Palace, Timothy D. W. Claridge, Rainer Hillenbrand, Johanna Oechtering, David Leppert, Jens Kühle, D C Anthony
Software Mentions: 5
Published: over 3 years ago

10.1002/acn3.50873

Agreement of amyloid PET and CSF biomarkers for Alzheimer's disease on Lumipulse
Cited by: 89
Author(s): Daniel Alcolea, Jordi Malé i Pegueroles, Laia Muñoz, Valle Camacho, Diego Alfonso López-Mora, Alejandro Fernández-León, Nathalie Le Bastard, Els Huyck, Alícia Nadal, Verónica Olmedo, Frederic Sampedro, Víctor Montal, Eduard Vilaplana, Jordi Clarimón, Rafael Blesa, Juan Fortea, Alberto Lleó
Software Mentions: 5
Published: about 5 years ago

10.1093/gastro/goaa069

Nomogram to predict primary non-response to infliximab in patients with Crohn’s disease: a multicenter study
Cited by: 3
Author(s): Xiao-Qi Ye, Jing Cai, Qiao Yu, Xiaocang Cao, Yan Chen, M. K. Rao, Baili Chen, Yao He, Zhirong Zeng, Hao Chen, Yimou Lin, Qian Cao, Minhu Chen, Shenghong Zhang
Software Mentions: 4
Published: about 4 years ago

10.1155/2020/8047146

A Novel Schizophrenia Diagnostic Model Based on Statistically Significant Changes in Gene Methylation in Specific Brain Regions
Cited by: 3
Author(s): Donghua Zou, Yufen Qiu, Rongjie Li, Youshi Meng, Yuan Wu
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12967-020-02415-8

MicroRNA-181a as novel liquid biopsy marker of central nervous system involvement in pediatric acute lymphoblastic leukemia
Cited by: 16
Author(s): Bálint Egyed, Nóra Kutszegi, Judit C. Sági, András Gézsi, Andrea Rzepiel, Tamás Visnovitz, Péter Lőrincz, Judit Müller, Marianna Zombori, Csaba Szalai, Dániel Erdélyi, Gabòr Kovàcs, Ágnes F. Semsei
Software Mentions: 4
Published: over 4 years ago

10.1155/2019/3869825

A Novel Clinical Six-Flavoprotein-Gene Signature Predicts Prognosis in Esophageal Squamous Cell Carcinoma
Cited by: 6
Author(s): Peng Liu, Jincheng Guo, Li-Wen Lin, Feng Pan, Jian Zhao, Li–Yan Xu, En‐Min Li
Software Mentions: 4
Published: about 5 years ago

10.1186/s12967-018-1744-8

Identification of a multidimensional transcriptome signature for survival prediction of postoperative glioblastoma multiforme patients
Cited by: 43
Author(s): Weizhen Gao, Liemei Guo, Tianqi Xu, Yu-Hua Yin, Jia Feng
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12967-021-03054-3

Interferon regulatory factor family influences tumor immunity and prognosis of patients with colorectal cancer
Cited by: 15
Author(s): Yanjie Chen, Sushan Luo, Ling Dong, Taotao Liu, Xizhong Shen, Ning‐Ping Zhang, Li Liang
Software Mentions: 4
Published: about 3 years ago

10.1371/journal.pmed.1002683

Variable generalization performance of a deep learning model to detect pneumonia in chest radiographs: A cross-sectional study
Cited by: 809
Author(s): John R. Zech, Marcus A. Badgeley, Manway Liu, Anthony Costa, J. Titano, Eric K. Oermann
Software Mentions: 4
Published: about 6 years ago

10.1186/s12967-020-02698-x

Identification of key biomarkers and immune infiltration in systemic lupus erythematosus by integrated bioinformatics analysis
Cited by: 78
Author(s): Xingwang Zhao, Longlong Zhang, Juan Wang, Min Zhang, Zhiqiang Song, Bing Ni, Yi You
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pmed.1003111

Preoperative risk stratification in endometrial cancer (ENDORISK) by a Bayesian network model: A development and validation study
Cited by: 22
Author(s): Casper Reijnen, Evangelia Gogou, Nicole C.M. Visser, Hilde Engerud, Jordache Ramjith, Louis J.M. van der Putten, Koen K. Van de Vijver, Marı́a Santacana, Peter Bronsert, Johan Bulten, Marc Hirschfeld, Eva Colás, Antonio Gil‐Moreno, Armando Reques, Gemma Mancebo, Camilla Krakstad, Jone Trovik, Ingfrid Salvesen Haldorsen, Jutta Huvila, Martin Koskas, Vít Weinberger, Markéta Bednaříková, Jitka Hausnerová, A.A.M. van der Wurff, Xavier Matías‐Guiu, Frédéric Amant, Leon F.A.G. Massuger, Marc P.L.M. Snijders, Heidi V.N. Küsters‐Vandevelde, Peter Lucas, Johanna M.A. Pijnenborg
Software Mentions: 4
Published: over 4 years ago

10.3389/fpsyg.2019.00480

BEEP—Bodily and Emotional Perception of Pain. A Questionnaire to Measure Reaction to Pain in Chronic Pain Disorders
Cited by: 3
Author(s): Antonio Preti, Serena Stocchino, Francesca Pinna, Manuela Deidda, Mario Musu, Federica Sancassiani, Ferdinando Romano, Sérgio Machado, Gabriele Finco, Mauro Giovanni Carta
Software Mentions: 4
Published: over 5 years ago

10.1186/s13040-018-0171-y

Connecting genetics and gene expression data for target prioritisation and drug repositioning
Cited by: 20
Author(s): Enrico Ferrero, Pankaj Agarwal
Software Mentions: 4
Published: over 6 years ago

10.1155/2020/1712604

Machine Learning Based on a Multiparametric and Multiregional Radiomics Signature Predicts Radiotherapeutic Response in Patients with Glioblastoma
Cited by: 11
Author(s): Ziqi Pan, Shujun Zhang, Xianglian Wang, Yang Jiao, Jianjian Qiu
Software Mentions: 4
Published: about 4 years ago

10.18632/oncotarget.26022

Metabolite quantification of faecal extracts from colorectal cancer patients and healthy controls
Cited by: 25
Author(s): Gwénaëlle Le Gall, Kiran Guttula, Lee Kellingray, Adrian Tett, Rogier ten Hoopen, E. Kate Kemsley, George M. Savva, Ashraf E.K. Ibrahim, Arjan Narbad
Software Mentions: 4
Published: about 6 years ago

10.3390/jpm11080772

Genetic Variants in PGE2 Receptors Modulate the Risk of Nephrosclerosis and Clinical Outcomes in These Patients
Cited by: 4
Author(s): Luz María González, Nicolás Roberto Robles, Sonia Mota-Zamorano, José M. Valdivielso, Juan M. López‐Gómez, Guillermo Gervasini
Software Mentions: 4
Published: over 3 years ago

10.18632/oncotarget.24468

Artificial neural network approach to predict surgical site infection after free-flap reconstruction in patients receiving surgery for head and neck cancer
Cited by: 31
Author(s): Pao‐Jen Kuo, Shao-Chun Wu, Peng‐Chen Chien, Shu-Shya Chang, Cheng-Shyuan Rau, Hsueh-Ling Tai, Shu-Hui Peng, Yi-Chien Lin, Yi‐Chun Chen, Hsiao-Yun Hsieh, Ching‐Hua Hsieh
Software Mentions: 4
Published: almost 7 years ago

10.1093/ons/opx163

Multivariable and Bayesian Network Analysis of Outcome Predictors in Acute Aneurysmal Subarachnoid Hemorrhage: Review of a Pure Surgical Series in the Post-International Subarachnoid Aneurysm Trial Era
Cited by: 10
Author(s): Zsolt Zádor, Wei Huang, Matthew Sperrin, Michael T. Lawton
Software Mentions: 4
Published: over 7 years ago

10.3390/nu13020619

Serum Selenium Status as a Diagnostic Marker for the Prognosis of Liver Transplantation
Cited by: 11
Author(s): Safak Gül‐Klein, Deana Haxhiraj, Julian Seelig, Anika Kästner, Julian Hackler, Qian Sun, Raban Arved Heller, Nils Lachmann, Johann Pratschke, Moritz Schmelzle, Lutz Schomburg
Software Mentions: 4
Published: almost 4 years ago

10.3390/ijms22010135

Circulating tRNA Fragments as a Novel Biomarker Class to Distinguish Acute Stroke Subtypes
Cited by: 13
Author(s): Thủy Nguyễn, M. Leontien van der Bent, Marieke J.H. Wermer, Ido R. van den Wijngaard, Erik W. van Zwet, Bas de Groot, Paul H.A. Quax, Nyika D. Kruyt, A. Yaël Nossent
Software Mentions: 4
Published: almost 4 years ago

10.3389/fonc.2021.604480

Diagnostic Performance of Vascular Permeability and Texture Parameters for Evaluating the Response to Neoadjuvant Chemoradiotherapy in Patients With Esophageal Squamous Cell Carcinoma
Cited by: 1
Author(s): Wen-Bing Ji, Jian Wang, Ronghui Zhou, Minke Wang, Weizhen Wang, Peipei Pang, Min Kong, Chao Zhou
Software Mentions: 4
Published: over 3 years ago

10.18632/aging.202153

Upregulation of KIF20A promotes tumor proliferation and invasion in renal clear cell carcinoma and is associated with adverse clinical outcome
Cited by: 30
Author(s): Xiaohan Ren, Xinglin Chen, Yisheng Ji, Liang-In Lin, Yunxin Li, Chao Qin, Kai Fang
Software Mentions: 4
Published: almost 4 years ago

10.7717/peerj.3632

Maxent-directed field surveys identify new populations of narrowly endemic habitat specialists
Cited by: 62
Author(s): Cody M. Rhoden, William E. Peterman, Christopher A. Taylor
Software Mentions: 4
Published: over 7 years ago

10.1186/s12885-016-2652-z

A nomogram for predicting pathological complete response in patients with human epidermal growth factor receptor 2 negative breast cancer
Cited by: 9
Author(s): Xi Jin, Yi Jiang, Sheng Chen, Ke Yu, Ding Ma, Wei Sun, Zhi Min Shao, Gen Hong Di
Software Mentions: 4
Published: over 8 years ago

10.1155/2019/1571045

A Circulating miRNA-Based Scoring System Established by WGCNA to Predict Colon Cancer
Cited by: 2
Author(s): Dashan Qin, Rui Wei, Si Liu, Shoumin Zhu, Shutian Zhang, Li Min
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12893-020-00969-4

A novel nomogram for predicting liver metastasis in patients with gastrointestinal stromal tumor: a SEER-based study
Cited by: 8
Author(s): Guowei Zhou, Keshuai Xiao, Guanwen Gong, Jiabao Wu, Ya Zhang, Xinxin Liu, Zhiwei Jiang, Chaoqun Ma
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12969-020-00480-3

Onset age is a risk factor for refractory pediatric IgA vasculitis: a retrospective cohort study
Cited by: 9
Author(s): Calvin C.Y. Liao, Ming-Hsien Tsai, Yao‐Hsu Yang, Bor‐Luen Chiang, Li‐Chieh Wang
Software Mentions: 4
Published: about 4 years ago

10.3389/fonc.2021.687884

CT-Based Radiomics Signature With Machine Learning Predicts MYCN Amplification in Pediatric Abdominal Neuroblastoma
Cited by: 16
Author(s): Xin Chen, Haoru Wang, Kai-Ping Huang, Huan Liu, Hui-Sheng Ding, Li Zhang, Ting Zhang, Wenqing Yu, Ling He
Software Mentions: 4
Published: over 3 years ago

10.3390/ijms21155359

Small Extracellular Vesicles Isolated from Serum May Serve as Signal-Enhancers for the Monitoring of CNS Tumors
Cited by: 17
Author(s): Gabriella Dobra, Mátyás Bukva, Z. G. Szabó, Bella Bruszel, Mária Harmati, Edina Gyukity-Sebestyén, Adrienn Jenei, Mónika Szűcs, Péter Horváth, Tamás Bı́ró, Álmos Klekner, Krisztina Buzás
Software Mentions: 4
Published: over 4 years ago

10.3390/nu12072098

Selenium Deficiency Is Associated with Mortality Risk from COVID-19
Cited by: 257
Author(s): Arash Moghaddam, Raban Arved Heller, Qian Sun, Julian Seelig, Asan Cherkezov, Linda Seibert, Julian Hackler, Petra Seemann, Joachim Diegmann, Maximilian Pilz, Manuel Bachmann, Waldemar B. Minich, Lutz Schomburg
Software Mentions: 4
Published: over 4 years ago

10.1016/j.jmb.2014.04.026

SuSPect: Enhanced Prediction of Single Amino Acid Variant (SAV) Phenotype Using Network Features
Cited by: 181
Author(s): Christopher M. Yates, Ioannis Filippis, Lawrence A. Kelley, Michael J.E. Sternberg
Software Mentions: 4
Published: over 10 years ago

10.3389/fnagi.2017.00013

MRI-Based Classification Models in Prediction of Mild Cognitive Impairment and Dementia in Late-Life Depression
Cited by: 62
Author(s): Aleksandra Lebedeva, Eric Westman, Tom Borza, Mona K. Beyer, Knut Engedal, Dag Aarsland, Geir Selbæk, Asta Håberg
Software Mentions: 4
Published: almost 8 years ago

10.3390/ijms19102894

Inhibitory Effect of Methotrexate on Rheumatoid Arthritis Inflammation and Comprehensive Metabolomics Analysis Using Ultra-Performance Liquid Chromatography-Quadrupole Time of Flight-Mass Spectrometry (UPLC-Q/TOF-MS)
Cited by: 30
Author(s): Zhiqiang Pang, Guoqiang Wang, Nan Ran, Hongqiang Lin, Ziyan Wang, Xuewa Guan, Yuze Yuan, Keyong Fang, Jinping Liu, Fang Wang
Software Mentions: 4
Published: about 6 years ago

10.1016/j.ahj.2016.10.020

Inadequacy of existing clinical prediction models for predicting mortality after transcatheter aortic valve implantation
Cited by: 41
Author(s): Glen P. Martin, Matthew Sperrin, Peter Ludman, Mark de Belder, Chris P Gale, William D. Toff, Neil Moat, Uday Trivedi, Iain Buchan, Mamas A. Mamas
Software Mentions: 4
Published: almost 8 years ago

10.1186/s13071-021-04780-9

Spatio-temporal modelling of Culicoides Latreille (Diptera: Ceratopogonidae) populations on Reunion Island (Indian Ocean)
Cited by: 0
Author(s): Yannick Grimaud, Annelise Tran, Samuel Benkimoun, Floriane Boucher, Olivier Esnault, Catherine Cêtre-Sossah, Éric Cardinale, Claire Garros, Hélène Guis
Software Mentions: 4
Published: over 3 years ago

10.1155/2016/3159617

The Difference between the Two Representative Kampo Formulas for Treating Dysmenorrhea: An Observational Study
Cited by: 15
Author(s): Tetsuhiro Yoshino, Kotoe Katayama, Yuko Horiba, Kaori Munakata, Rui Yamaguchi, Seiya Imoto, Satoru Miyano, Hideki Mima, Kenji Watanabe, Masaru Mimura
Software Mentions: 4
Published: almost 9 years ago

10.1183/13993003.03201-2020

Plasma metabolomics exhibit response to therapy in chronic thromboembolic pulmonary hypertension
Cited by: 23
Author(s): Emilia M. Swietlik, Pavandeep Ghataorhe, Kasia Zalewska, John Wharton, Luke Howard, Dolores Taboada, John Cannon, Nicholas W. Morrell, Martin R. Wilkins, Mark Toshner, Joanna Pepke‐Zaba, Christopher J. Rhodes
Software Mentions: 4
Published: about 4 years ago

10.3390/ijerph16183435

A Multi-Center Competing Risks Model and Its Absolute Risk Calculation Approach
Cited by: 1
Author(s): Wang Jin-tao, Zhongshang Yuan, Yi Liu, Fuzhong Xue
Software Mentions: 4
Published: about 5 years ago

10.3389/fonc.2021.704994

Enhanced CT-Based Radiomics to Predict Micropapillary Pattern Within Lung Invasive Adenocarcinoma
Cited by: 4
Author(s): Yunyu Xu, Wenbin Ji, Liqiao Hou, Shuangxiang Lin, Yangyang Shi, Chao Zhou, Yinnan Meng, Wei Wang, Xiaofeng Chen, Meihao Wang, Haihua Yang
Software Mentions: 4
Published: about 3 years ago

10.3389/fonc.2021.620200

Methylation Regulation of TLR3 on Immune Parameters in Lung Adenocarcinoma
Cited by: 3
Author(s): Ang Li, Hongjiao Wu, Quan Tian, Yi Zhang, Zhi Zhang, Xuemei Zhang
Software Mentions: 4
Published: over 3 years ago

10.1186/s40462-015-0033-x

Foraging ecology of three sympatric ungulate species – Behavioural and resource maps indicate differences between chamois, ibex and red deer
Cited by: 28
Author(s): Anna K. Schweiger, Martin Schütz, Pia Anderwald, Michael E. Schaepman, Mathias Kneubühler, Rudolf Haller, Anita C. Risch
Software Mentions: 4
Published: over 9 years ago

10.3390/ijms20122950

TargetAntiAngio: A Sequence-Based Tool for the Prediction and Analysis of Anti-Angiogenic Peptides
Cited by: 36
Author(s): Vishuda Laengsri, Chanin Nantasenamat, Nalini Schaduangrat, Pornlada Nuchnoi, Virapong Prachayasittikul, Watshara Shoombuatong
Software Mentions: 4
Published: over 5 years ago

10.16910/jemr.11.2.12

A linear oscillator model predicts dynamic temporal attention and pupillary entrainment to rhythmic patterns
Cited by: 13
Author(s): Lauren Fink, Brian K. Hurley, Joy J. Geng, Petr Janata
Software Mentions: 4
Published: about 6 years ago

10.3389/fonc.2020.00604

Radiomics-Based Preoperative Prediction of Lymph Node Status Following Neoadjuvant Therapy in Locally Advanced Rectal Cancer
Cited by: 31
Author(s): Xuezhi Zhou, Yan Yi, Zhenyu Liu, Zhiyang Zhou, Bingjia Lai, Kai Sun, Longfei Li, Luqi Huang, Yanqiu Feng, Wuteng Cao, Jie Tian
Software Mentions: 4
Published: over 4 years ago

10.3389/fonc.2021.618677

Development and Validation a Nomogram Incorporating CT Radiomics Signatures and Radiological Features for Differentiating Invasive Adenocarcinoma From Adenocarcinoma In Situ and Minimally Invasive Adenocarcinoma Presenting as Ground-Glass Nodules Measuring 5-10mm in Diameter
Cited by: 11
Author(s): Lili Shi, Wei Shi, Xueqing Peng, Yi Zhan, Linxiao Zhou, Yunpeng Wang, Mingxiang Feng, Jing Zhao, Fei Shan, Lei Liu
Software Mentions: 4
Published: over 3 years ago

10.1002/1878-0261.12158

Prognostic value of an immunohistochemical signature in patients with esophageal squamous cell carcinoma undergoing radical esophagectomy
Cited by: 20
Author(s): Meng Ji, Junhua Zhang, Yingjie Xiu, Yan Jin, Jiaqing Xiang, Yongzhan Nie, Shihua Fu, Kuaile Zhao
Software Mentions: 4
Published: almost 7 years ago

10.1186/1471-2369-15-60

A prediction model for renal artery stenosis using carotid ultrasonography measurements in patients undergoing coronary angiography
Cited by: 17
Author(s): Yong-Gu Lee, Jeong‐Hun Shin, Hwan Cheol Park, Soon Gil Kim, Sung Il Choi
Software Mentions: 4
Published: over 10 years ago

10.3389/fonc.2020.628608

Upregulation of Long Non-Coding RNA GCC2-AS1 Facilitates Malignant Phenotypes and Correlated With Unfavorable Prognosis for Lung Adenocarcinoma
Cited by: 6
Author(s): Fengqiang Yu, Mingqiang Liang, Weidong Wu, Yu Huang, Juanjuan Zheng, Bin Zheng, Chun Chen
Software Mentions: 4
Published: almost 4 years ago

10.1002/mgg3.214

Computational assessment of feature combinations for pathogenic variant prediction
Cited by: 12
Author(s): Eva König, Johannes Michael Rainer, Francisco S. Domingues
Software Mentions: 4
Published: over 8 years ago

10.3390/molecules24101973

ACPred: A Computational Tool for the Prediction and Analysis of Anticancer Peptides
Cited by: 109
Author(s): Nalini Schaduangrat, Chanin Nantasenamat, Virapong Prachayasittikul, Watshara Shoombuatong
Software Mentions: 4
Published: over 5 years ago

10.3389/fgene.2019.00232

Central and Peripheral Changes in FOS Expression in Schizophrenia Based on Genome-Wide Gene Expression
Cited by: 10
Author(s): Jing Huang, Fangkun Liu, Bolun Wang, Hui Tang, Ziwei Teng, Lehua Li, Yan Qiu, Haishan Wu, Jindong Chen
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pgen.1009392

Genome-wide association study of resistance to Mycobacterium tuberculosis infection identifies a locus at 10q26.2 in three distinct populations
Cited by: 14
Author(s): Jocelyn Quistrebert, Marianna Orlova, Gaspard Kerner, Le Thi Ton, Nguyễn Trong Luong, Nguyễn Thanh Danh, Quentin B. Vincent, Fabienne Jabot‐Hanin, Yoann Seeleuthner, Jacinta Bustamante, Stéphanie Boisson‐Dupuis, Nguyễn Thu Hương, Nguyen Ngoc Ba, Jean‐Laurent Casanova, Christophe Delacourt, Eileen G. Hoal, Alexandre Alcaïs, Vu Hong Thai, Lai The Thành, Laurent Abel, Erwin Schurr, Aurélie Cobat
Software Mentions: 4
Published: over 3 years ago

10.3390/cancers12082003

Methylation Patterns and Chromatin Accessibility in Neuroendocrine Lung Cancer
Cited by: 5
Author(s): Elsa Arbajian, Mattias Aine, Anna Karlsson, Johan Vallon‐Christersson, Hans Brunnström, Josef Davidsson, Sofie Mohlin, Maria Planck, Johan Staaf
Software Mentions: 4
Published: over 4 years ago

10.1016/j.jalz.2019.03.007

Inflammatory biomarkers in Alzheimer's disease plasma
Cited by: 118
Author(s): Angharad R. Morgan, Samuel Touchard, Claire Leckey, Caroline O’Hagan, Alejo J. Nevado‐Holgado, Frederik Barkhof, Lars Bertram, Olivier Blin, Isabelle Bos, Valerija Dobričić, Sebastiaan Engelborghs, Giovanni B. Frisoni, Lutz Frölich, Silvey Gabel, Peter Johannsen, Petronella Kettunen, Iwona Kłoszewska, Cristina Legido‐Quigley, Alberto Lleó, Pablo Martínez-Lage, Patrizia Mecocci, Karen Meersmans, José Luís Molinuevo, Gwendoline Peyratout, Julius Popp, Jill C. Richardson, Isabel Sala, Philip Scheltens, Johannes Streffer, Hikka Soininen, Mikel Tainta, Charlotte E. Teunissen, Magda Tsolaki, Rik Vandenberghe, Pieter Jelle Visser, Stephanie J.B. Vos, Lars‐Olof Wahlund, Anders Wallin, Sarah Westwood, Henrik Zetterberg, Simon Lovestone, B. Paul Morgan, Alzheimer’s Disease
Software Mentions: 4
Published: over 5 years ago

10.3390/microorganisms9020294

Potential Association between Vaginal Microbiota and Cervical Carcinogenesis in Korean Women: A Cohort Study
Cited by: 23
Author(s): Gi-Ung Kang, Da-Ryung Jung, Yoon Hee Lee, Se Young Jeon, Hyung Soo Han, Gun Oh Chong, Jae‐Ho Shin
Software Mentions: 4
Published: almost 4 years ago

10.1007/s00439-017-1808-5

Global skin colour prediction from DNA
Cited by: 96
Author(s): Susan Walsh, Lakshmi Chaitanya, Krystal Breslin, Charanya Muralidharan, Agnieszka Bronikowska, Ewelina Pośpiech, Júlia Koller, Leda Kovatsi, Andreas Wollstein, Wojciech Branicki, Fan Liu, Manfred Kayser
Software Mentions: 4
Published: over 7 years ago

10.1186/s40168-018-0515-3

Breast cancer in postmenopausal women is associated with an altered gut metagenome
Cited by: 157
Author(s): Jia Zhu, Ming Liao, Ziting Yao, Wenying Liang, Qibin Li, Jianlun Liu, Huawei Yang, Yinan Ji, Wei Wei, Aihua Tan, Sai Liang, Yang Chen, Haisong Lin, Xinyuan Zhu, Shengzhu Huang, Jiarong Tian, Rongjiang Tang, Qiuyan Wang, Zengnan Mo
Software Mentions: 4
Published: over 6 years ago

10.1186/s12891-021-04414-2

Risk analysis of pulmonary metastasis of chondrosarcoma by establishing and validating a new clinical prediction model: a clinical study based on SEER database
Cited by: 16
Author(s): Wenle Li, Shengtao Dong, Haosheng Wang, Rilige Wu, Huitao Wu, Zhi-Ri Tang, Junyan Zhang, Zhaohui Hu, Chengliang Yin
Software Mentions: 4
Published: over 3 years ago

10.1186/s12866-021-02182-6

Potential of fecal microbiota for detection and postoperative surveillance of colorectal cancer
Cited by: 9
Author(s): Qizheng Yao, Meifang Tang, Liuhong Zeng, Zhonghua Chu, Hui Sheng, Yuyu Zhang, Yuan Zhou, Hongyun Zhang, Huayan Jiang, Mingzhi Ye
Software Mentions: 4
Published: over 3 years ago

10.1186/s13059-017-1203-5

Multi-tissue DNA methylation age predictor in mouse
Cited by: 307
Author(s): Thomas M. Stubbs, Marc Jan Bonder, Anne-Katrien Stark, Felix Krueger, Ferdinand von Meyenn, Oliver Stegle, Wolf Reik
Software Mentions: 4
Published: over 7 years ago

10.1186/s12942-015-0001-0

Modelling the potential spatial distribution of mosquito species using three different techniques
Cited by: 33
Author(s): Daniela Cianci, Nienke Hartemink, Adolfo Ibáñez-Justicia
Software Mentions: 4
Published: almost 10 years ago

10.3390/nu12123599

Se Status Prediction by Food Intake as Compared to Circulating Biomarkers in a West Algerian Population
Cited by: 9
Author(s): Moussa Belhadj, Latifa Sarra Kazi Tani, Nouria Dennouni-Medjati, Yahia Harek, Majda Dali Sahi, Qian Sun, Raban Arved Heller, Ammaria Behar, Laurent Charlet, Lutz Schomburg
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12859-021-04235-z

Putative markers for the detection of early-stage bladder cancer selected by urine metabolomics
Cited by: 11
Author(s): Jia You Lin, Bao Rong Juo, Yu Hsuan Yeh, Shu Hsuan Fu, Yi Ting Chen, Chien Lun Chen, Kun Wu
Software Mentions: 4
Published: over 3 years ago

10.1007/s11306-020-1646-7

Identification to species level of live single microalgal cells from plankton samples with matrix-free laser/desorption ionization mass spectrometry
Cited by: 13
Author(s): Tim U. H. Baumeister, Marine Vallet, Filip Kaftan, Laure Guillou, Aleš Svatoš, Georg Pohnert
Software Mentions: 4
Published: over 4 years ago

10.1007/s11306-020-01750-7

SUMMER, a shiny utility for metabolomics and multiomics exploratory research
Cited by: 3
Author(s): Ling Huang, António Currais, Maxim N. Shokhirev
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12874-016-0277-1

Clinical prediction in defined populations: a simulation study investigating when and how to aggregate existing models
Cited by: 21
Author(s): Glen P. Martin, Mamas A. Mamas, Niels Peek, Iain Buchan, Matthew Sperrin
Software Mentions: 4
Published: almost 8 years ago

10.7150/thno.47066

Urinary glycoproteins associated with aggressive prostate cancer
Cited by: 19
Author(s): Mingming Dong, Tung-Shing Mamie Lih, Shao Yung Chen, Kyung Cho Cho, Rodrigo Vargas Eguez, Naseruddin Höti, Yangying Zhou, Weiming Yang, Leslie A. Mangold, Daniel W. Chan, Zhen Zhang, Lori J. Sokoll, Alan W. Partin, Hui Zhang
Software Mentions: 4
Published: almost 5 years ago

10.3389/fonc.2021.725922

Radiomic Evaluations of the Diagnostic Performance of DM, DBT, DCE MRI, DWI, and Their Combination for the Diagnosisof Breast Cancer
Cited by: 4
Author(s): Shuxian Niu, Xiaoyu Wang, Nannan Zhao, Guanyu Liu, Yangyang Kan, Yue Dong, Enuo Cui, Yahong Luo, Tao Yu, Xiran Jiang
Software Mentions: 4
Published: about 3 years ago

10.3389/fonc.2020.616263

Immunohistochemical Signature Add Prognostic Value in Patients With Early and Intermediate Hepatocellular Carcinoma Underwent Curative Liver Resection
Cited by: 2
Author(s): Yan Bai, Yuane Lian, Xiaoping Chen, Jiayi Wu, Jianlin Lai, Funan Qiu, Songqiang Zhou, Zijing Zhu, Yuan Tian, Yaodong Wang, Yinghong Yang, Mao-Lin Yan
Software Mentions: 4
Published: almost 4 years ago

10.1186/1471-2288-13-62

Predicting hemoglobin levels in whole blood donors using transition models and mixed effects models
Cited by: 14
Author(s): Kazem Nasserinejad, Wim de Kort, M. L. Baart, Arnošt Komárek, Joost van Rosmalen, Emmanuel Lesaffre
Software Mentions: 4
Published: over 11 years ago

10.3390/cancers13112568

Radiomic Based Machine Learning Performance for a Three Class Problem in Neuro-Oncology: Time to Test the Waters?
Cited by: 10
Author(s): Sarv Priya, Yanan Liu, Caitlin Ward, Nam Le, Neetu Soni, Ravishankar Pillenahalli Maheshwarappa, Varun Monga, Honghai Zhang, Milan Sonka, Girish Bathla
Software Mentions: 4
Published: over 3 years ago

10.18632/aging.202765

Pan-cancer analysis identifies ITIH1 as a novel prognostic indicator for hepatocellular carcinoma
Cited by: 7
Author(s): Q Q Chang, Ting Mao, Tao Yan, Tao Dong, Xuan-xuan Tang, Ge Gao, Zi‐jun Xu
Software Mentions: 4
Published: over 3 years ago

10.7150/thno.46142

A panel of eight microRNAs is a good predictive parameter for triple-negative breast cancer relapse
Cited by: 42
Author(s): Hsiao-Chin Hong, Ching-Te Chuang, Wei‐Chih Huang, Shun-Long Weng, Chia-Hung Chen, Kuang-Hsin Chang, Kuang‐Wen Liao, Hsien-Da Huang
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12911-018-0702-y

Towards stroke prediction using electronic health records
Cited by: 21
Author(s): Douglas Teoh
Software Mentions: 4
Published: almost 6 years ago

10.3389/fonc.2021.704218

RGB Three-Channel SWE-Based Ultrasomics Model: Improving the Efficiency in Differentiating Focal Liver Lesions
Cited by: 2
Author(s): Minquan Cheng, Meng-Fei Xian, Wei Tian, Ming‐De Li, Hang-Tong Hu, Wei Li, Jianchao Zhang, Yang Huang, Xiaoyan Xie, Ming-De Lü, Ming Kuang, Wei Wang, Si-Min Ruan, Li-Da Chen
Software Mentions: 4
Published: about 3 years ago

10.3389/fonc.2021.744951

The Landscape of Immune Cells Indicates Prognosis and Applicability of Checkpoint Therapy in Hepatocellular Carcinoma
Cited by: 7
Author(s): Jiacheng Huang, Lele Zhang, Jianxiang Chen, Dalong Wan, Lin Zhou, Shusen Zheng, Yiting Qiao
Software Mentions: 4
Published: about 3 years ago

10.1371/journal.pone.0236982

Is short-term-variation of fetal-heart-rate a better predictor of fetal acidaemia in labour? A feasibility study
Cited by: 5
Author(s): Habiba Kapaya, Richard Jacques, Thomas Almond, Miss Hilary Rosser, Dilly Anumba
Software Mentions: 4
Published: over 4 years ago

10.1186/1475-2840-13-84

Impact of serum omentin-1 levels on cardiac prognosis in patients with heart failure
Cited by: 62
Author(s): Takatsune Narumi, Tetsu Watanabe, Shinpei Kadowaki, Daisuke Kinoshita, Masahiro Yokoyama, Yuki Honda, Yoichiro Otaki, Satoshi Nishiyama, Hiroki Takahashi, Takanori Arimoto, Tetsuro Shishido, Takuya Miyamoto, Isao Kubota
Software Mentions: 4
Published: over 10 years ago

10.18632/aging.202634

Long non-coding RNAs ENST00000429730.1 and MSTRG.93125.4 are associated with metabolic activity in tuberculosis lesions of sputum-negative tuberculosis patients
Cited by: 5
Author(s): Lin Wang, Wen Zhu, Hui Ma, Liwei Wu, Hui Chen, Yijun Zhu, Liangfei Niu, Qihang Wu, Hongwei Li, Lei Shi, Leilei Li, Leiyi Wan, Jun Wang, Ka-Wing Wong, Yanzheng Song
Software Mentions: 4
Published: over 3 years ago

10.3389/fnins.2021.657465

Novel Insight Into the Role of Immune Dysregulation in Amyotrophic Lateral Sclerosis Based on Bioinformatic Analysis
Cited by: 7
Author(s): Yuanyang Xie, Ximei Luo, Hongping He, Min Tang
Software Mentions: 4
Published: over 3 years ago

10.1186/s12880-019-0355-z

Computed tomography-based predictive nomogram for differentiating primary progressive pulmonary tuberculosis from community-acquired pneumonia in children
Cited by: 21
Author(s): Bei Wang, Min Li, He Ma, Fangfang Han, Yan Wang, Shunying Zhao, Zhimin Liu, Tao Yu, Jie Tian, Di Dong, Yun Peng
Software Mentions: 4
Published: over 5 years ago

10.1186/s12859-015-0846-z

Predicting transcription factor site occupancy using DNA sequence intrinsic and cell-type specific chromatin features
Cited by: 28
Author(s): Sunil Kumar, Philipp Bücher
Software Mentions: 4
Published: almost 9 years ago

10.1186/s12880-021-00564-w

CT-based radiomics combined with signs: a valuable tool to help radiologist discriminate COVID-19 and influenza pneumonia
Cited by: 14
Author(s): Yurong Huang, Zhenguang Zhang, Siyun Liu, Xiang Li, Yaewon Yang, Jiyao Ma, Zhipeng Li, Jialong Zhou, Yuanming Jiang, Bo He
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41598-021-91791-2

Variable immunodeficiency score upfront analytical link (VISUAL), a proposal for combined prognostic score at diagnosis of common variable immunodeficiency
Cited by: 1
Author(s): Kissy Guevara-Hoyer, Adolfo Jiménez‐Huete, Júlia Vasconcelos, Esmeralda Neves, Silvia Sánchez-Ramón
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-021-93528-7

Preoperative nomogram for microvascular invasion prediction based on clinical database in hepatocellular carcinoma
Cited by: 6
Author(s): Shuqi Mao, Xi Yu, Yong Yang, Yuying Shan, Joseph Mugaanyi, Shengping Wu, Caide Lu
Software Mentions: 4
Published: over 3 years ago

10.1002/cam4.1666

The TERT promoter mutation status and MGMT promoter methylation status, combined with dichotomized MRI-derived and clinical features, predict adult primary glioblastoma survival
Cited by: 20
Author(s): Chang Shu, Qiong Wang, Xiaoqian Yan, Jinhuan Wang
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-021-89768-2

Using artificial intelligence and longitudinal location data to differentiate persons who develop posttraumatic stress disorder following childhood trauma
Cited by: 9
Author(s): Damien Lekkas, Nicholas C. Jacobson
Software Mentions: 4
Published: over 3 years ago

10.1007/s00262-020-02778-3

IL-10, IL-13, Eotaxin and IL-10/IL-6 ratio distinguish breast implant-associated anaplastic large-cell lymphoma from all types of benign late seromas
Cited by: 12
Author(s): Arianna Di Napoli, Daniele Greco, Giorgia Scafetta, Francesca Ascenzi, Alessandro Gulino, Luigi Aurisicchio, Fabio Santanelli di Pompeo, Adriana Bonifacino, Enrico Giarnieri, John Morgan, Rita Mancini, Marshall E. Kadin
Software Mentions: 4
Published: about 4 years ago

10.1186/s40644-021-00395-6

Radiomic nomogram based on MRI to predict grade of branching type intraductal papillary mucinous neoplasms of the pancreas: a multicenter study
Cited by: 14
Author(s): Shuai Cui, Tianyu Tang, Qiuming Su, Yajie Wang, Zhenyu Shu, Wei Yang, Xiangyang Gong
Software Mentions: 4
Published: over 3 years ago

10.1186/s40644-019-0256-y

Radiogenomic analysis of vascular endothelial growth factor in patients with diffuse gliomas
Cited by: 19
Author(s): Zimin Sun, Yiming Li, Yinyan Wang, Xing Fan, Kaibin Xu, Kai Wang, Shaowu Li, Zhong Zhang, Tao Jiang, Xing Liu
Software Mentions: 4
Published: about 5 years ago

10.1038/s41598-020-77160-5

Pupillary light reflex in ethambutol-induced optic neuropathy
Cited by: 0
Author(s): Yung Ju Yoo, Jeong Min Hwang, Hee Kyung Yang
Software Mentions: 4
Published: almost 4 years ago

10.3389/fneur.2020.00316

Observational Study of Pulse Transit Time in Children With Sleep Disordered Breathing
Cited by: 1
Author(s): Michael Yanney, Andrew Prayle, Nicola J. Rowbotham, Miguel Kurc, Sean Tilbrook, Nabeel Ali
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-020-75333-w

Expression of NF-κB associated lncRNAs in schizophrenia
Cited by: 13
Author(s): Amin Safa, Elham Badrlou, Shahram Arsang‐Jang, Arezou Sayad, Mohammad Taheri, Soudeh Ghafouri‐Fard
Software Mentions: 4
Published: about 4 years ago

10.1038/s41598-021-82729-9

NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapy
Cited by: 14
Author(s): Sayuri Yoshihama, Steven Cho, Jason Yeung, Xuedong Pan, Gregory Lizee, Kranti Konganti, Valen E. Johnson, Koichi S. Kobayashi
Software Mentions: 4
Published: almost 4 years ago

10.3389/fneur.2019.00512

Serial S100B Sampling Detects Intracranial Lesion Development in Patients on Extracorporeal Membrane Oxygenation
Cited by: 7
Author(s): Alexander Fletcher‐Sandersjöö, Caroline Lindblad, Eric Peter Thelin, Jiri Bartek, Marko Sallisalmi, Adrian Elmi-Terander, Mikael Svensson, Bo‐Michael Bellander, Lars Broman
Software Mentions: 4
Published: over 5 years ago