cran: pROC | Projects | Ecosyste.ms: Papers

10.3390/jcm9072184

Circulating miRNAs as a Predictive Biomarker of the Progression from Prediabetes to Diabetes: Outcomes of a 5-Year Prospective Observational Study
Cited by: 28
Author(s): Iwona Sidorkiewicz, Magdalena Niemira, Katarzyna Maliszewska, Anna Erol, Agnieszka Bielska, Anna Szałkowska, Edyta Adamska-Patruno, Łukasz Szczerbiński, Maria Górska, Adam Krętowski
Software Mentions: 2
Published: over 6 years ago

10.1186/s12873-021-00466-8

Development and validation of a scoring system for mortality prediction and application of standardized W statistics to assess the performance of emergency departments
Cited by: 5
Author(s): Jin Woo Jeong, Sung Woo Lee, Won Young Kim, Kap Su Han, Su Jin Kim, Hyun−Goo Kang
Software Mentions: 2
Published: over 5 years ago

10.1186/s12872-021-02146-8

Identification of candidate biomarkers and therapeutic agents for heart failure by bioinformatics analysis
Cited by: 19
Author(s): Vijayakrishna Kolur, Basavaraj Vastrad, Chanabasayya Vastrad, Shivakumar Kotturshetti, Anandkumar Tengli
Software Mentions: 2
Published: over 5 years ago

10.1186/s12872-018-0766-8

Screening key genes for abdominal aortic aneurysm based on gene expression omnibus dataset
Cited by: 9
Author(s): Li Wan, Jingyong Huang, Hong-Bo Ni, Yu Guo
Software Mentions: 2
Published: over 8 years ago

10.3390/jcm10081784

Clinical History and Detectable Troponin Concentrations below the 99th Percentile for Risk Stratification of Patients with Chest Pain and First Normal Troponin
Cited by: 1
Author(s): Agustín Fernández‐Cisnal, Ernesto Valero, Sergio García‐Blas, Vicente Pernías, Adela Pozo, Arturo Carratalá, Jessika González, José Noceda, Gema Miñana, Julio Núñez, Juan Sanchı́s Forés
Software Mentions: 2
Published: over 5 years ago

10.1128/JCM.01431-16

Multicenter Pivotal Clinical Trial of Urine Malaria Test for Rapid Diagnosis of Plasmodium falciparum Malaria
Cited by: 25
Author(s): Wellington Oyibo, Nnenna Ezeigwe, Godwin Ntadom, Olanrewaju Oladosu, Kaitlin Rainwater-Loveth, Wendy Prudhomme O’Meara, Evaezi Okpokoro, William R. Brieger
Software Mentions: 2
Published: almost 10 years ago

10.1128/JCM.00255-21

The Usefulness of Two CXCL13 Assays on Cerebrospinal Fluid for the Diagnosis of Lyme Neuroborreliosis: a Retrospective Study in a Routine Clinical Setting
Cited by: 7
Author(s): Tamara van Gorkom, Gijs H J van Arkel, Michiel Heron, W. Voet, Steven Thijsen, Kristin Kremer
Software Mentions: 2
Published: about 5 years ago

10.1186/s12885-020-6640-y

miRNA expression profiling of hereditary breast tumors from BRCA1- and BRCA2-germline mutation carriers in Brazil
Cited by: 10
Author(s): Danielle Pessôa‐Pereira, Adriane Feijó Evangelista, Rhafaela Lima Causin, René Aloísio da Costa Vieira, Lucas Faria Abrahão-Machado, Iara Viana Vidigal Santana, Vinícius Duval da Silva, Karen Cristina Borba Souza, Renato José de Oliveira-Silva, Gabriela Fernandes, Rui Manuel Reis, Edenir Inêz Palmero, Márcia Maria Chiquitelli Marques
Software Mentions: 2
Published: over 6 years ago

10.1007/s10278-017-9980-7

Deep Convolutional Neural Networks for Endotracheal Tube Position and X-ray Image Classification: Challenges and Opportunities
Cited by: 71
Author(s): Paras Lakhani
Software Mentions: 2
Published: over 9 years ago

10.1186/s12885-021-08466-4

A nomogram prediction model for lymph node metastasis in endometrial cancer patients
Cited by: 14
Author(s): Zhong Lin Wang, Shuo Zhang, Yihui Ma, Wenhui Li, Jing Tian, Ting Liu
Software Mentions: 2
Published: over 5 years ago

10.1016/j.prevetmed.2021.105407

Spatio-temporal distribution and agroecological factors associated with canine leptospirosis in Great Britain
Cited by: 11
Author(s): CA Taylor, David Brodbelt, Barnaby Dobson, Briän Catchpole, D G O'Neill, Kim Stevens
Software Mentions: 2
Published: about 5 years ago

10.1155/2014/347416

Continuous Dynamic Registration of Microvascularization of Liver Tumors with Contrast-Enhanced Ultrasound
Cited by: 10
Author(s): Lukas Philipp Beyer, Benedikt Pregler, Isabel Wiesinger, Christian Stroszczynski, P Wiggermann, Ernst Michael Jung
Software Mentions: 2
Published: almost 13 years ago

10.1186/s12958-021-00706-3

Identification of key pathways and genes in polycystic ovary syndrome via integrated bioinformatics analysis and prediction of small therapeutic molecules
Cited by: 14
Author(s): Praveen Devarbhavi, Lata Telang, Basavaraj Vastrad, Anandkumar Tengli, Chanabasayya Vastrad, Iranna Kotturshetti
Software Mentions: 2
Published: over 5 years ago

10.21203/rs.3.rs-126892/v1

Federated Learning used for predicting outcomes in SARS-COV-2 patients
Cited by: 16
Author(s): Mona G. Flores, Ittai Dayan, Holger R. Roth, Aoxiao Zhong, Ahmed Harouni, Amilcare Gentili, Anas Z. Abidin, Andy Liu, Anthony Costa, Bradford J. Wood, Chien‐Sung Tsai, Chih‐Hung Wang, Chun‐Nan Hsu, C K Lee, Colleen Ruan, Daguang Xu, Dufan Wu, Eddie Huang, Felipe Kitamura, Griffin Lacey, Gustavo César de Antônio Corradi, Hao-Hsin Shin, Hirofumi Obinata, Rutai Hui, Jason C. Crane, Jesse Tetreault, Jiahui Guan, John W. Garrett, Jung Gil Park, Keith Dreyer, Krishna Juluru, Kristopher Kersten, Márcio Aloisio Bezerra Cavalcanti Rockenbach, Marius George Linguraru, Masoom A. Haider, Meena AbdelMaseeh, Nicola Rieke, Pablo F. Damasceno, Pedro Mário Cruz e Silva, Po-Chuan Wang, Sheng Xu, Shuichi Kawano, Sira Sriswa, Soo Young Park, Thomas M. Grist, Varun Buch, Watsamon Jantarabenjakul, Weichung Wang, Won Young Tak, Xiang Li, Xihong Lin, Fred Kwon, Fiona J. Gilbert, Joshua D. Kaggie, Quanzheng Li, Abood Quraini, Andrew Feng, Andrew N. Priest, Barış Türkbey, Benjamin S. Glicksberg, Bernardo C. Bizzo, Byung Seok Kim, Carlos Tor-Díez, Chia-Cheng Lee, Chia‐Jung Hsu, Chin Lin, Chin-Lun Lai, Christopher P. Hess, Colin B. Compas, Deepi Bhatia, Eric K. Oermann, Evan Leibovitz, Hisashi Sasaki, Hitoshi Mori, Isaac Yang, Jae Ho Sohn, Krishna Nand Keshava Murthy, Li‐Chen Fu, Matheus R. F. Mendonça, Mike Fralick, Min Kyu Kang, Mohammad Adil, Natalie Gangai, Peerapon Vateekul, Pierre Elnajjar, Sarah Hickman, Sharmila Majumdar, Shelley McLeod, Sheridan L. Reed, Stefan Gräf, Stephanie Harmon, Tatsuhiko Kodama, Thanyawee Puthanakit, Tony Mazzulli, Vitor de Lima Lavor, Yothin Rakvongthai, Yu Rim Lee, Yuhong Wen
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12931-018-0828-6

Circulating microRNAs and prediction of asthma exacerbation in childhood asthma
Cited by: 62
Author(s): Alvin T. Kho, Michael J. McGeachie, Kip G. Moore, Jody M. Sylvia, Scott T. Weiss, Kelan G. Tantisira
Software Mentions: 2
Published: over 8 years ago

10.1186/s12931-021-01761-5

A novel miRNA biomarker panel associated with mortality in pediatric patients with ARDS
Cited by: 4
Author(s): Lisa Lee, Mansoureh Eghbali, Anil Sapru
Software Mentions: 2
Published: over 5 years ago

10.1186/2046-1682-5-7

Arbitrary protein−protein docking targets biologically relevant interfaces
Cited by: 37
Author(s): Juliette Martin, Richard Lavery
Software Mentions: 2
Published: over 14 years ago

10.1038/srep20602

Intestinal Microbiota Distinguish Gout Patients from Healthy Humans
Cited by: 213
Author(s): Zhuang Guo, Jiachao Zhang, Zhanli Wang, Kay Ying Ang, Shi Huang, Qiangchuan Hou, Xiaoquan Su, Jun Qiao, Yi Zheng, Lifeng Wang, Eileen Y. Koh, Ho Danliang, Jian Xu, Yuan Kun Lee, Heping Zhang
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2105-13-331

Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study
Cited by: 110
Author(s): Lei Sun, Zhihua Zhang, Timothy L. Bailey, Andrew C. Perkins, Michael R. Tallack, Zhao‐Xu Xu, Hui Liu
Software Mentions: 2
Published: almost 14 years ago

10.1038/srep43326

Unravelling the metabolic impact of SBS-associated microbial dysbiosis: Insights from the piglet short bowel syndrome model
Cited by: 17
Author(s): Prue M. Pereira‐Fantini, Sean G. Byars, James Pitt, Susan Lapthorne, Fiona Fouhy, Paul D. Cotter, Julie E Bines
Software Mentions: 2
Published: over 9 years ago

10.1186/1471-2105-15-39

Statistical analysis of differential gene expression relative to a fold change threshold on NanoString data of mouse odorant receptor genes
Cited by: 26
Author(s): Evelien Vaes, Mona Khan, Peter Mombaerts
Software Mentions: 2
Published: over 12 years ago

10.1038/s41598-017-00631-9

A Circulating MicroRNA Signature Capable of Assessing the Risk of Hepatocellular Carcinoma in Cirrhotic Patients
Cited by: 29
Author(s): Ya‐Hui Huang, Kung–Hao Liang, Rong‐Nan Chien, Tsung–Hui Hu, Kwang‐Huei Lin, Cheng–Lung Hsu, Chih‐Lang Lin, Tai‐Long Pan, Po‐Yuan Ke, Chau‐Ting Yeh
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-017-01332-z

Dysregulation of Blimp1 transcriptional repressor unleashes p130Cas/ErbB2 breast cancer invasion
Cited by: 16
Author(s): Marianna Sciortino, Maria del Pilar Camacho-Leal, Francesca Orso, Elena Grassi, Andrea Costamagna, Paolo Provero, Wayne Tam, Emilia Turco, Paola Defilippi, Daniela Taverna, Sara Cabodi
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-017-06674-2

Cytokine-based Predictive Models to Estimate the Probability of Chronic Periodontitis: Development of Diagnostic Nomograms
Cited by: 27
Author(s): Inmaculada Tomás, Nora Arias-Bujanda, Manuela Alonso-Sampedro, M. Casares de Cal, César Andrés Sánchez Sellero, David Suárez-Quintanilla, Carlos Balsa-Castro
Software Mentions: 2
Published: about 9 years ago

10.1038/s41598-017-15031-2

Plasmodium falciparum parasites with histidine-rich protein 2 (pfhrp2) and pfhrp3 gene deletions in two endemic regions of Kenya
Cited by: 83
Author(s): Khalid B. Beshir, Nuno Sepúlveda, Jameel Bharmal, Ailie Robinson, Julian Mwanguzi, Annette O. Busula, Jetske G. de Boer, Colin J. Sutherland, Jane Cunningham, Heidi Hopkins
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-018-31845-0

Exploration of serum sensitive biomarkers of fatty liver in dairy cows
Cited by: 13
Author(s): Yizhao Shen, Lianmin Chen, Wenzhu Yang, Zhonghua Wang
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-31738-2

The gastric mucosal-associated microbiome in patients with gastric polyposis
Cited by: 13
Author(s): Rongrong Ren, Zikai Wang, Huaibo Sun, Xuefeng Gao, Gang Sun, Lihua Peng, Bin Yan, Yunsheng Yang
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-35376-6

Cerebrospinal Fluid Levels of Autophagy-related Proteins Represent Potentially Novel Biomarkers of Early-Stage Parkinson’s Disease
Cited by: 27
Author(s): Jinyoung Youn, Sang Bin Lee, Hyo Sang Lee, Hyun Ok Yang, Jinse Park, Ji Sun Kim, Eungseok Oh, Suyeon Park, Wooyoung Jang
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12859-021-04345-8

The regulatory pattern of target gene expression by aberrant enhancer methylation in glioblastoma
Cited by: 4
Author(s): Xiaoxiao Zhao, Jianghuai Ji, Wang Shi-jia, Rendong Wang, Qiuhong Yu, Dongguo Li
Software Mentions: 2
Published: about 5 years ago

10.1186/1471-2105-13-272

Gene expression anti-profiles as a basis for accurate universal cancer signatures
Cited by: 43
Author(s): Héctor Corrada Bravo, Vasyl Pihur, Matthew N. McCall, Rafael A. Irizarry, Jeffrey T. Leek
Software Mentions: 2
Published: about 14 years ago

10.1002/advs.202001936

Alterations of the Human Gut Microbiome in Chronic Kidney Disease
Cited by: 74
Author(s): Zhigang Ren, Yijun Fan, Ang Li, Quanquan Shen, Jian Wu, Lingyan Ren, Haifeng Lü, Shuzhe Ding, Hongyan Ren, Chao Liu, Wenli Liu, Dan Gao, Zhongwen Wang, Shiyuan Guo, Wei Ge, Zhangsuo Liu, Zujiang Yu, Lanjuan Li
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-019-46872-8

Circulating microRNAs as Potential Diagnostic and Prognostic Biomarkers in Hepatocellular Carcinoma
Cited by: 90
Author(s): Yu Jin, Ye Shen Wong, Brian K. P. Goh, Chung Yip Chan, Peng Chung Cheow, Pierce K. H. Chow, Tony Kiat Hon Lim, Graham S. Goh, Thinesh Lee Krishnamoorthy, Rajneesh Kumar, Tze Pin Ng, Samuel S. Chong, Hwee Huang Tan, Alexander Y. F. Chung, London Lucien Peng Jin Ooi, Jaerak Chang, Chee Kiat Tan, Caroline Lee
Software Mentions: 2
Published: over 7 years ago

10.1186/s12859-020-03574-7

PPAI: a web server for predicting protein-aptamer interactions
Cited by: 9
Author(s): Jianwei Li, Xiaoyu Ma, Xichuan Li, Jun Gu
Software Mentions: 2
Published: over 6 years ago

10.1002/advs.202001978

A Fifteen‐Gene Classifier to Predict Neoadjuvant Chemotherapy Responses in Patients with Stage IB to IIB Squamous Cervical Cancer
Cited by: 7
Author(s): Xun Tian, Xin Wang, Zifeng Cui, Jia Liu, Xiaoyuan Huang, Chao Shi, Min Zhang, Ting Liu, Xiaofang Du, Rui Li, Lei Huang, Danni Gong, Rui Tian, Chen Cao, Jin Park, Zhen Zeng, Guangxin Pan, Meng Xia, Hongfeng Zhang, Baoming Luo, Yonghui Xie, Xiaoming Li, Tianye Li, Jun Wu, Qinghua Zhang, Gang Chen, Zheng Hu
Software Mentions: 2
Published: over 5 years ago

10.1186/s12859-019-2853-y

Capturing the differences between humoral immunity in the normal and tumor environments from repertoire-seq of B-cell receptors using supervised machine learning
Cited by: 23
Author(s): Hiroki Konishi, Daisuke Komura, Hiroto Katoh, Saoko Atsumi, Hirotomo Koda, Asami Yamamoto, Yasuyuki Seto, Masashi Fukayama, Rui Yamaguchi, Seiya Imoto, Shumpei Ishikawa
Software Mentions: 2
Published: over 7 years ago

10.1186/s12871-018-0646-x

Prediction of postoperative mortality in elderly patient with hip fractures: a single-centre, retrospective cohort study
Cited by: 18
Author(s): Romain Niessen, Benoît Bihin, Maximilien Gourdin, Jean Cyr Yombi, Olivier Cornu, Patrice Forget
Software Mentions: 2
Published: almost 8 years ago

10.1186/s13075-021-02625-5

Integrative analysis of genome-wide DNA methylation and single-nucleotide polymorphism identified ACSM5 as a suppressor of lumbar ligamentum flavum hypertrophy
Cited by: 6
Author(s): Yanlin Cao, Ye-Nan Zhan, Sujun Qiu, Zhong Chen, Kaiqin Gong, Songjia Ni, Yang Duan
Software Mentions: 2
Published: about 5 years ago

10.1016/j.jhepr.2021.100317

Determining a healthy reference range and factors potentially influencing PRO-C3 – A biomarker of liver fibrosis
Cited by: 18
Author(s): Elisabeth Erhardtsen, Daniel Guldager Kring Rasmussen, Peder Frederiksen, Diana Julie Leeming, Diane E. Shevell, Lise Lotte Gluud, Morten A. Karsdal, Guruprasad P. Aithal, Jörn M. Schattenberg
Software Mentions: 2
Published: about 5 years ago

10.1016/j.ijpara.2021.01.005

Novel statistical approaches to identify risk factors for soil-transmitted helminth infection in Timor-Leste
Cited by: 5
Author(s): Jessica Yi Han Aw, Naomi E. Clarke, Helen J. Mayfield, Colleen L Lau, Alice Richardson, Susana Vaz Nery
Software Mentions: 2
Published: about 5 years ago

10.5588/ijtld.17.0492

Accuracy of an automated system for tuberculosis detection on chest radiographs in high-risk screening
Cited by: 21
Author(s): Jaime Melendez, Laurens Hogeweg, Clara I. Sánchez, Rick H. H. M. Philipsen, Robert W Aldridge, Andrew Hayward, Ibrahim Abubakar, Bram van Ginneken, Alistair Story
Software Mentions: 2
Published: over 8 years ago

10.5935/abc.20180220

Left Ventricular Regional Wall Motion Abnormality is a Strong Predictor of Cardiotoxicity in Breast Cancer Patients Undergoing Chemotherapy
Cited by: 8
Author(s): Márcio Vinícius Lins Barros, Ariane Vieira Scarlatelli Macedo, Sebastian Imre Sarvari, Monica Hermont Faleiros, Patricia Tavares Felipe, José Luiz Padilha Silva, Thor Edvardsen
Software Mentions: 2
Published: almost 9 years ago

10.1007/s11657-020-00867-5

Establishment and verification of an osteoporosis risk model in patients with rheumatoid arthritis: a valuable new model
Cited by: 4
Author(s): Xiaoling Yan, Zhenhong Xu, Shilin Li, Lisheng Yan, Guorong Lyu, Zecheng Wang
Software Mentions: 2
Published: almost 6 years ago

10.2196/15992

Deep Learning Neural Networks to Predict Serious Complications After Bariatric Surgery: Analysis of Scandinavian Obesity Surgery Registry Data
Cited by: 16
Author(s): Yang Cao, Scott Montgomery, Johan Ottosson, Erik Näslund, Erik Stenberg
Software Mentions: 2
Published: over 6 years ago

10.2196/17784

Identifying and Predicting Intentional Self-Harm in Electronic Health Record Clinical Notes: Deep Learning Approach
Cited by: 22
Author(s): Jihad S. Obeid, Jennifer Dahne, Sean Christensen, Samuel Howard, Tami L. Crawford, Lewis J. Frey, Tracy Stecker, Brian E. Bunnell
Software Mentions: 2
Published: about 6 years ago

10.3390/ijerph13121216

Estimation of Saliva Cotinine Cut-Off Points for Active and Passive Smoking during Pregnancy—Polish Mother and Child Cohort (REPRO_PL)
Cited by: 20
Author(s): Kinga Polańska, Anna Król, Paweł Kałużny, Danuta Ligocka, Karolina Mikołajewska, Seif O. Shaheen, Robert Walton, Wojciech Hanke
Software Mentions: 2
Published: almost 10 years ago

10.3390/ijerph17186907

Three Diagnoses for Problematic Hypersexuality; Which Criteria Predict Help-Seeking Behavior?
Cited by: 7
Author(s): Piet van Tuijl, Aerjen Tamminga, Gert-Jan Meerkerk, Peter Verboon, Ruslan Leontjevas, Jacques van Lankveld
Software Mentions: 2
Published: about 6 years ago

10.3390/antiox9080649

Clinical Utility of Plasma Lipid Peroxidation Biomarkers in Alzheimer’s Disease Differential Diagnosis
Cited by: 8
Author(s): Carmen Peña-Bautista, Lourdes Rojas Álvarez, Thierry Durand, Claire Vigor, Ana Cuevas, Miguel Baquero, Máximo Vento, David Hervás, Consuelo Cháfer-Pericás
Software Mentions: 2
Published: over 6 years ago

10.1007/s00442-021-04984-x

Behavioral effects of wolf presence on moose habitat selection: testing the landscape of fear hypothesis in an anthropogenic landscape
Cited by: 4
Author(s): Håkan Sand, Mark Jamieson, Henrik Andrén, Camilla Wikenros, Joris P. G. M. Cromsigt, Johan Månsson
Software Mentions: 2
Published: about 5 years ago

10.1002/jia2.25501

Drug level testing as a strategy to determine eligibility for drug resistance testing after failure of ART: a retrospective analysis of South African adult patients on second‐line ART
Cited by: 12
Author(s): Lucas E Hermans, Kim Steegen, Rob ter Heine, Rob Schuurman, Hugo Tempelman, Robert Moraba, Erik van Maarseveen, Monique Nijhuis, Taryn Pillay, Derryn Audrey Legg-E'Silva, Tracy Snyman, Jonathan Schapiro, David M. Burger, Sergio Carmona, Annemarie M. J. Wensing
Software Mentions: 2
Published: over 6 years ago

10.1002/acn3.50965

Transmembrane protease serine 5: a novel Schwann cell plasma marker for CMT1A
Cited by: 24
Author(s): Hongge Wang, Matt Davison, Kathryn Wang, Tai-he Xia, Martin Kramer, Katherine M. Call, Jun Luo, Xingyao Wu, Riccardo Zuccarino, Chelsea Bacon, Yunhong Bai, John J. Moran, Laurie Gutmann, Shawna Feely, Tiffany Grider, Alexander M. Rossor, John Svaren, Michael E. Shy
Software Mentions: 2
Published: almost 7 years ago

10.1093/jmammal/gyab060

Spatial and temporal variability in summer diet of gray wolves (Canis lupus) in the Greater Yellowstone Ecosystem
Cited by: 5
Author(s): Hanna Kavli Lodberg-Holm, Bonnie S. Teglas, Daniel B. Tyers, Michael D. Jimenez, Douglas W. Smith
Software Mentions: 2
Published: over 5 years ago

10.3390/ijms18040845

Comparative Study of Blood-Based Biomarkers, α2,3-Sialic Acid PSA and PHI, for High-Risk Prostate Cancer Detection
Cited by: 40
Author(s): Montserrat Ferrer-Batallé, Esther Llop, Manel Ramírez, Rosa Núria Aleixandre, Marc Sáez, Josep Comet, Rafael de Llorens, Rosa Peracaula
Software Mentions: 2
Published: over 9 years ago

10.3390/ijms19030693

The Complex Subtype-Dependent Role of Connexin 43 (GJA1) in Breast Cancer
Cited by: 27
Author(s): Mélanie Busby, Michael Hallett, Isabelle Plante
Software Mentions: 2
Published: over 8 years ago

10.7717/peerj.8458

CD86+/CD206+ tumor-associated macrophages predict prognosis of patients with intrahepatic cholangiocarcinoma
Cited by: 25
Author(s): Dalong Sun, Tao Luo, Pingping Dong, Ning‐Ping Zhang, Jing Chen, Shuncai Zhang, Longzi Liu, Ling Dong, Zhongzhou Si
Software Mentions: 2
Published: almost 7 years ago

10.7717/peerj.1934

Does cognitive flexibility predict treatment gains in Internet-delivered psychological treatment of social anxiety disorder, depression, or tinnitus?
Cited by: 16
Author(s): Philip Lindner, Per Carlbring, Erik Flodman, Amanda Hebert, Stephanie Poysti, Filip Hagkvist, Robert Johansson, Vendela Zetterqvist, Thomas Berger, Gerhard Andersson
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pcbi.1004506

Connectivity Homology Enables Inter-Species Network Models of Synthetic Lethality
Cited by: 27
Author(s): Jacunski Alexandra, Scott J. Dixon, Nicholas P. Tatonetti
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pcbi.1002830

Novel Modeling of Combinatorial miRNA Targeting Identifies SNP with Potential Role in Bone Density
Cited by: 37
Author(s): Claudia Coronnello, Ryan J. Hartmaier, Arshi Arora, Luai Huleihel, Kusum Pandit, Abha Bais, Michael Butterworth, Naftali Kaminski, Gary D. Stormo, Steffi Oesterreich, Panayiotis V. Benos
Software Mentions: 2
Published: almost 14 years ago

10.7717/peerj.9458

Transcriptome analysis reveals a reprogramming energy metabolism-related signature to improve prognosis in colon cancer
Cited by: 1
Author(s): Xinxin Zhang, Jiu Hua Xu, Yujia Lan, Fenghua Guo, Yun Xiao, Yixue Li, Xia Li
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pgen.1004122

Coherent Functional Modules Improve Transcription Factor Target Identification, Cooperativity Prediction, and Disease Association
Cited by: 31
Author(s): Konrad J. Karczewski, M Snyder, Russ B. Altman, Nicholas P. Tatonetti
Software Mentions: 2
Published: over 12 years ago

10.7717/peerj.9535

Diagnostic and prognostic values of upregulated SPC25 in patients with hepatocellular carcinoma
Cited by: 7
Author(s): Xunzhe Yang, Hongzhi Sun, Ying Song, Yang Li, Haibo Li
Software Mentions: 2
Published: over 6 years ago

10.7717/peerj.10307

DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma
Cited by: 4
Author(s): Ming Li, Shuhua Xia, Ping Shi
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pmed.1003489

A combination of urinary biomarker panel and PancRISK score for earlier detection of pancreatic cancer: A case–control study
Cited by: 23
Author(s): Silvana Debernardi, Harrison O’Brien, Asma S. Algahmdi, Núria Malats, Grant D. Stewart, Marija Plješa-Ercegovac, Eithne Costello, William Greenhalf, Ahmed S. Saad, Rhiannon Roberts, Alexander Ney, Stephen P. Pereira, Hemant M. Kocher, Stephen W. Duffy, Oleg Blyuss, Tatjana Crnogorac‐Jurčević
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pmed.1001916

A Molecular Host Response Assay to Discriminate Between Sepsis and Infection-Negative Systemic Inflammation in Critically Ill Patients: Discovery and Validation in Independent Cohorts
Cited by: 147
Author(s): Leo McHugh, Therese Seldon, Roslyn A. Brandon, James T. Kirk, Antony Rapisarda, Allison J. Sutherland, Jeffrey Presneill, Deon J. Venter, Jeffrey Lipman, Mervyn Thomas, Peter M. C. Klein Klouwenberg, Lonneke van Vught, Brendon P. Scicluna, Marc Bonten, Olaf L. Cremer, Marcus J. Schultz, Tom van der Poll, Thomas D. Yager, Richard B. Brandon
Software Mentions: 2
Published: almost 11 years ago

10.3390/ijms21010075

iQSP: A Sequence-Based Tool for the Prediction and Analysis of Quorum Sensing Peptides Using Informative Physicochemical Properties
Cited by: 50
Author(s): Phasit Charoenkwan, Nalini Schaduangrat, Chanin Nantasenamat, Theeraphon Piacham, Watshara Shoombuatong
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pmed.1003381

Assessment of deep neural networks for the diagnosis of benign and malignant skin neoplasms in comparison with dermatologists: A retrospective validation study
Cited by: 21
Author(s): Seung Seog Han, Ik Jun Moon, Seong Hwan Kim, Jung Im Na, Myoung Shin Kim, Gyeong Hun Park, Ilwoo Park, Keewon Kim, Woohyung Lim, Ju Hee Lee, Sung Eun Chang
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pntd.0008746

Validation study of HLA-B*13:01 as a biomarker of dapsone hypersensitivity syndrome in leprosy patients in Indonesia
Cited by: 14
Author(s): Hana Krismawati, Astrid Irwanto, Arry Pongtiku, Ishak D. Irwan, Yustinus Maladan, Yuli Arisanti Sitanggang, Tri Wahyuni, Ratna Tanjung, Yonghu Sun, Hong Liu, Furen Zhang, Antonius Oktavian, Jing Liu
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pntd.0005709

Identifying wildlife reservoirs of neglected taeniid tapeworms: Non-invasive diagnosis of endemic Taenia serialis infection in a wild primate population
Cited by: 12
Author(s): India Schneider‐Crease, Rodger W. Griffin, Megan A. Gomery, Pierre Dorny, John Noh, Sukwan Handali, Holly M. Chastain, Patricia P. Wilkins, Charles L. Nunn, Noah Snyder‐Mackler, Jacinta C. Beehner, Thore J. Bergman
Software Mentions: 2
Published: over 9 years ago

10.7717/peerj.8951

The relationship between adolescent obesity and pelvis dimensions in adulthood: a retrospective longitudinal study
Cited by: 8
Author(s): Jan Novák, Jaroslav Brůžek, Hana Zamrazilová, Markéta Vaňková, Martin Hill, Petr Sedlák
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pntd.0005032

The Sero-epidemiology of Coxiella burnetii in Humans and Cattle, Western Kenya: Evidence from a Cross-Sectional Study
Cited by: 49
Author(s): Nicola A. Wardrop, Lian F. Thomas, Elizabeth A. J. Cook, William A. de Glanville, Peter M. Atkinson, C. N. Wamae, Eric M. Fèvre
Software Mentions: 2
Published: about 10 years ago

10.7717/peerj.7070

PGM5: a novel diagnostic and prognostic biomarker for liver cancer
Cited by: 47
Author(s): Yan Jiao, Yanqing Li, Peiqiang Jiang, Wei Han, Yahui Liu
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.11427

Identification of diagnostic genes and vital microRNAs involved in rheumatoid arthritis: based on data mining and experimental verification
Cited by: 6
Author(s): Conglin Ren, Mingshuang Li, Yang Zheng, Fengqing Wu, Weibin Du, Renfu Quan
Software Mentions: 2
Published: over 5 years ago

10.3390/ijms21031142

Cell-Based Blood Biomarkers for Myalgic Encephalomyelitis/Chronic Fatigue Syndrome
Cited by: 14
Author(s): Daniel Missailidis, Oana Sanislav, Claire Y. Allan, Sarah J. Annesley, Paul R. Fisher
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0182962

Identification of Shiga-Toxigenic Escherichia coli outbreak isolates by a novel data analysis tool after matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
Cited by: 5
Author(s): Coralie Martin, Dirk Dressler, Mark Andrian, Claudia Reule, Orlando Petrini
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0181377

Follicle Stimulating Hormone is an accurate predictor of azoospermia in childhood cancer survivors
Cited by: 22
Author(s): Tom Kelsey, Lauren McConville, Angela B Edgar, Alex I Ungurianu, Rod T Mitchell, Richard A. Anderson, William H. Wallace
Software Mentions: 2
Published: over 9 years ago

10.3389/pore.2021.1609784

Integrative Analysis of DNA Methylation and Gene Expression Profiles Identifies Colorectal Cancer-Related Diagnostic Biomarkers
Cited by: 4
Author(s): Mingyue Xu, Lijun Yuan, Yan Wang, Shuo Chen, Lin Zhang, Xipeng Zhang
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0219933

Cardiometabolic thresholds for peak 30-min cadence and steps/day
Cited by: 14
Author(s): Bryan Adams, Katie Fidler, Noah Demoes, Elroy J. Aguiar, Scott W. Ducharme, Aston K. McCullough, Christopher C. Moore, Catrine Tudor-Locke, Diana M. Thomas
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0101924

Rapid MALDI-TOF Mass Spectrometry Strain Typing during a Large Outbreak of Shiga-Toxigenic Escherichia coli
Cited by: 82
Author(s): Coralie Martin, Maria Trusch, Holger Rohde, Marcel Kwiatkowski, Hartmut Schlüter, Manuel Wolters, Martin Aepfelbacher, Moritz Hentschke
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0116574

Low-Order Non-Spatial Effects Dominate Second-Order Spatial Effects in the Texture Quantifier Analysis of 18F-FDG-PET Images
Cited by: 12
Author(s): Frank J. Brooks, Perry W. Grigsby
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0091987

Non-Invasive Assessment of Hepatic Steatosis in Patients with NAFLD Using Controlled Attenuation Parameter and 1H-MR Spectroscopy
Cited by: 127
Author(s): Thomas Karlas, David Petroff, Nikita Garnov, Stephan Böhm, H Tenckhoff, Christian Wittekind, Manfred Wiese, Ingolf Schiefke, Nicolas Linder, Alexander Schaudinn, Harald Busse, Thomas Kahn, Joachim Mössner, Thomas Berg, Matthias Tröltzsch, Volker Keim, Johannes Wiegand
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0076813

Diagnosing Fatty Liver Disease: A Comparative Evaluation of Metabolic Markers, Phenotypes, Genotypes and Established Biomarkers
Cited by: 9
Author(s): Sabine Siegert, Zhonghao Yu, Rui Wang-Sattler, Thomas Illig, Jerzy Adamski, Jochen Hampe, Susanna Nikolaus, Stefan Schreiber, Michael Krawczak, Michael Nothnagel, Ute Nöthlings
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0219322

Multinomial modelling of TB/HIV co-infection yields a robust predictive signature and generates hypotheses about the HIV+TB+ disease state
Cited by: 11
Author(s): Fergal J. Duffy, Ethan Thompson, Thomas J. Scriba, Daniel E. Zak
Software Mentions: 2
Published: over 7 years ago

10.1186/s13071-015-1222-6

Environmental and anthropogenic factors affecting the probability of occurrence of Oncomegas wageneri (Cestoda: Trypanorhyncha) in the southern Gulf of Mexico
Cited by: 10
Author(s): Víctor M. Vidal‐Martínez, Edgar Tórres-Irineo, David Romero, Gerardo Gold-Bouchot, Enrique Martínez‐Meyer, David Valdés-Lozano, M. Leopoldina Aguirre-Macedo
Software Mentions: 2
Published: almost 11 years ago

10.3390/ijms21197169

The Interplay between Transcriptional Factors and MicroRNAs as an Important Factor for Th17/Treg Balance in RA Patients
Cited by: 17
Author(s): Tomasz Kmiołek, Ewa Rzeszotarska, Anna Wajda, Ewa Walczuk, Ewa Kuca-Warnawin, Katarzyna Romanowska-Próchnicka, Barbara Stypińska, Dominik Majewski, Paweł P. Jagodzińśki, Andrzej Pawlik, Agnieszka Paradowska‐Gorycka
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0226765

Predicting breast cancer risk using personal health data and machine learning models
Cited by: 47
Author(s): Gigi Felice Stark, Gregory R. Hart, Bradley J. Nartowt, Jun Deng
Software Mentions: 2
Published: almost 7 years ago

10.3390/ijms22010012

MHCII3D—Robust Structure Based Prediction of MHC II Binding Peptides
Cited by: 9
Author(s): Josef Laimer, Peter Lackner
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13071-015-0973-4

Does Triatoma brasiliensis occupy the same environmental niche space as Triatoma melanica?
Cited by: 13
Author(s): Rita de Cássia Moreira de Souza, Gabriel Henrique Campolina-Silva, Cláudia Mendonça Bezerra, Liléia Diotaiuti, David Eladio Gorla
Software Mentions: 2
Published: over 11 years ago

10.1186/1756-3305-6-71

Modelling the risk of being bitten by malaria vectors in a vector control area in southern Benin, west Africa
Cited by: 14
Author(s): Nicolas Moiroux, Abdul S Bio-Bangana, Armel Djènontin, Fabrice Chandre, Vincent Corbel, Hélène Guis
Software Mentions: 2
Published: over 13 years ago

10.1155/2019/1092415

From “Every Day” Hormonal to Oxidative Stress Biomarkers in Blood and Follicular Fluid, to Embryo Quality and Pregnancy Success?
Cited by: 10
Author(s): Katarzyna Olszak-Wąsik, Anna Bednarska-Czerwińska, Anita Olejek, Andrzej Tukiendorf
Software Mentions: 2
Published: almost 7 years ago

10.12669/pjms.37.4.3371

Prediction of ICU admission after orthopedic surgery in elderly patients
Cited by: 1
Author(s): Yawen Tang, Hao Li, Zhiyong Guo
Software Mentions: 2
Published: over 5 years ago

10.1007/s00345-015-1650-0

Targeted transperineal biopsy of the prostate has limited additional benefit over background cores for larger MRI-identified tumors
Cited by: 8
Author(s): Tristan Barrett, Andrew J. Patterson, Brendan Koo, Karan Wadhwa, Anne Y. Warren, Andrew Doble, Vincent Gnanapragasam, Christof Kastner, Ferdia A. Gallagher
Software Mentions: 2
Published: about 11 years ago

10.7554/eLife.44310

A four-DNA methylation biomarker is a superior predictor of survival of patients with cutaneous melanoma
Cited by: 42
Author(s): Wenna Guo, Liucun Zhu, Rui Zhu, Qihan Chen, Qiang Wang, Jian-Qun Chen
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.22162

Circular RNA circ-NT5C2 acts as an oncogene in osteosarcoma proliferation and metastasis through targeting miR-448
Cited by: 48
Author(s): Xunfa Liu, Yun‐Shi Zhong, Jifeng Li, Aijun Shan
Software Mentions: 1
Published: almost 9 years ago

10.1093/gigascience/gix005

Orthogonal decomposition of left ventricular remodeling in myocardial infarction
Cited by: 13
Author(s): Xingyu Zhang, Pau Medrano-Gracia, Bharath Ambale‐Venkatesh, David A. Bluemke, Brett R. Cowan, J. Paul Finn, Alan H. Kadish, Daniel Lee, João A.C. Lima, Alistair A. Young, Avan Suinesiaputra
Software Mentions: 1
Published: over 9 years ago

10.1186/s12943-020-1139-3

CircPTK2 (hsa_circ_0005273) as a novel therapeutic target for metastatic colorectal cancer
Cited by: 129
Author(s): Hongbao Yang, Xiaobo Li, Qingtao Meng, Hao Sun, Shenshen Wu, Weiwei Hu, Guilai Liu, Xianjing Li, Yong Yang, Rui Chen
Software Mentions: 1
Published: almost 7 years ago

10.1186/1741-7015-12-110

Urinary metabolic profiles in early pregnancy are associated with preterm birth and fetal growth restriction in the Rhea mother–child cohort study
Cited by: 73
Author(s): Léa Maitre, Eleni Fthenou, Toby J. Athersuch, Muireann Coen, Mireille B. Toledano, Elaine Holmes, Manolis Kogevinas, Leda Chatzi, Hector C. Keun
Software Mentions: 1
Published: over 12 years ago

10.7554/eLife.63364

The genetic landscape for amyloid beta fibril nucleation accurately discriminates familial Alzheimer’s disease mutations
Cited by: 31
Author(s): Mireia Seuma, Aline Faure, Marta Badía, Ben Lehner, Ben Lehner
Software Mentions: 1
Published: over 5 years ago

10.1186/s12916-014-0224-0

miRNAs can be generally associated with human pathologies as exemplified for miR-144*
Cited by: 71
Author(s): Andreas Keller, Petra Leidinger, Britta Vogel, Christina Backes, Abdou ElSharawy, Valentina Galata, Sabine C. Mueller, Sabine Marquart, Michael G. Schrauder, Reiner Strick, Andrea S. Bauer, J Wischhusen, Markus Beier, Jochen Kohlhaas, Hugo A. Katus, Jï¿1⁄2rg D. Hoheisel, André Franke, Benjamin Meder, Eckart Meese
Software Mentions: 1
Published: almost 12 years ago

10.1136/gutjnl-2017-314026

Methylation panel is a diagnostic biomarker for Barrett’s oesophagus in endoscopic biopsies and non-endoscopic cytology specimens
Cited by: 64
Author(s): Hamza Chettouh, Oliver Mowforth, Núria Galeano-Dalmau, Navya Bezawada, Caryn S. Ross-Innes, Shona MacRae, Irene Debiram–Beecham, Maria O’Donovan, Rebecca C. Fitzgerald
Software Mentions: 1
Published: almost 9 years ago

10.3390/children8040314

Boredom in Adolescence: Validation of the Italian Version of the Multidimensional State Boredom Scale (MSBS) in Adolescents
Cited by: 2
Author(s): Andrea Spoto, Sara Iannattone, Perla Valentini, Alessia Raffagnato, Marina Miscioscia, Michela Gatta
Software Mentions: 1
Published: over 5 years ago

10.1186/s13099-020-00391-4

Potential role of intestinal microflora in disease progression among patients with different stages of Hepatitis B
Cited by: 20
Author(s): Xiu Yang, Fengchun Lv, Ran Wang, Yange Chang, Yiming Zhao, Xinyu Cui, Haochen Li, S.-J. Yang, Suting Li, Xuemin Zhao, Zhishuo Mo, Fang Yang
Software Mentions: 1
Published: about 6 years ago

Projects: cran: pROC

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Papers Mentioning pROC 1,740