Projects: cran: nlme

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/nlme

Linear and Nonlinear Mixed Effects Models
147 versions
Latest release: over 3 years ago
431 dependent packages
137,096 downloads last month

Science Score: 100/100
Starting Score: 100 points
Bonuses:

Very Likely Science (100)

Papers Mentioning nlme 3,265

10.1371/journal.pone.0127432
Adrenal Hormones in Common Bottlenose Dolphins (Tursiops truncatus): Influential Factors and Reference Intervals
Cited by: 25
Author(s): Leslie Hart, Randall S. Wells, Nick Kellar, Brian C. Balmer, Aleta A. Hohn, Simon Lamb, Teri Rowles, Eric S. Zolman, Lori H. Schwacke
Software Mentions: 1
Published: over 11 years ago
10.1186/1746-6148-10-143
Assessment of the effect of intraarticular injection of autologous adipose-derived mesenchymal stem cells in osteoarthritic dogs using a double blinded force platform analysis
Cited by: 91
Author(s): Jose M. G. Vilar, M. Batista, Manuel Morales, Ángelo Santana, Belén Cuervo, Mónica Rubio, Ramón Cugat, Joaquín Sopena, José M. Carrillo
Software Mentions: 1
Published: almost 13 years ago
10.1371/journal.pone.0106419
Symbiodinium Photosynthesis in Caribbean Octocorals
Cited by: 19
Author(s): Blake Ramsby, Kartick P. Shirur, Roberto Iglesias-Prieto, Tamar L. Goulet
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0012604
Intraspecific Diversity Regulates Fungal Productivity and Respiration
Cited by: 27
Author(s): Anna Wilkinson, Martin Solan, Andrew Taylor, Ian J. Alexander, David Johnson
Software Mentions: 1
Published: about 16 years ago
10.1371/journal.pone.0136369
Single Doses up to 800 mg of E-52862 Do Not Prolong the QTc Interval – A Retrospective Validation by Pharmacokinetic-Pharmacodynamic Modelling of Electrocardiography Data Utilising the Effects of a Meal on QTc to Demonstrate ECG Assay Sensitivity
Cited by: 13
Author(s): Jörg Täubel, Georg Ferber, Ulrike Lorch, Duolao Wang, Mariano Sust, A. John Camm
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pone.0194752
Effect of leukocyte-reduced platelet-rich plasma on osteoarthritis caused by cranial cruciate ligament rupture: A canine gait analysis model
Cited by: 22
Author(s): Jose M. G. Vilar, María Manera, Ángelo Santana, Giuseppe Spinella, Oliver Rodríguez, Mónica Rubio, José M. Carrillo, Joaquín Sopena, M. Batista
Software Mentions: 1
Published: over 8 years ago
10.1186/s12917-015-0510-x
Effective prevention of pseudothrombocytopenia in feline blood samples with the prostaglandin I2 analogue Iloprost
Cited by: 10
Author(s): Barbara Riond, Andrea Katharina Waßmuth, Sonja Hartnack, Regina Hofmann‐Lehmann, Hans Lutz
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0057747
Implicating Culicoides Biting Midges as Vectors of Schmallenberg Virus Using Semi-Quantitative RT-PCR
Cited by: 79
Author(s): Eva Veronesi, Mark Henstock, Simon Gubbins, Carrie Batten, Robyn Manley, James Barber, Bernd Hoffmann, Martin Beer, Houssam Attoui, Peter P. C. Mertens, Simon Carpenter
Software Mentions: 1
Published: over 13 years ago
10.1186/s12917-019-2075-6
Water treadmill exercise reduces equine limb segmental accelerations and increases shock attenuation
Cited by: 9
Author(s): Persephone Greco‐Otto, Michael Baggaley, W. Brent Edwards, Renaud Léguillette
Software Mentions: 1
Published: about 7 years ago
10.1007/s10493-016-0042-5
Antipredator behaviours of a spider mite in response to cues of dangerous and harmless predators
Cited by: 18
Author(s): Camila Carneiro Dias, Ana Maria Guimarães Bernardo, Jussara Mencalha, Caelum Woods Carvalho Freitas, Renato Almeida Sarmento, Ângelo Pallini, Arne Janssen
Software Mentions: 1
Published: over 10 years ago
10.1186/s40662-015-0013-7
Effect of image registration on longitudinal analysis of retinal nerve fiber layer thickness of non-human primates using Optical Coherence Tomography (OCT)
Cited by: 4
Author(s): Shuang Liu, Anjali Datta, Derek Ho, Jordan Dwelle, Daifeng Wang, Thomas E. Milner, H. G. Rylander, Mia K. Markey
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0126534
Performance Assessment of Two Whole-Lake Acoustic Positional Telemetry Systems - Is Reality Mining of Free-Ranging Aquatic Animals Technologically Possible?
Cited by: 43
Author(s): Henrik Baktoft, Petr Zajíček, Thomas Klefoth, Jon Christian Svendsen, Lene Jacobsen, Martin Wæver Pedersen, David March, Christian Skov, Shinnosuke Nakayama, Robert Arlinghaus
Software Mentions: 1
Published: over 11 years ago
10.12688/f1000research.4412.2
Shark fisheries in the Southeast Pacific: A 61-year analysis from Peru
Cited by: 17
Author(s): Adriana González-Pestana, J Carlos Kouri, Ximena Vélez‐Zuazo
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0032323
Phenotypic Plasticity Influences the Size, Shape and Dynamics of the Geographic Distribution of an Invasive Plant
Cited by: 62
Author(s): Jean‐Baptiste Pichancourt, Rieks D. van Klinken
Software Mentions: 1
Published: over 14 years ago
10.1186/s12917-020-02529-7
Antioxidant capacity of lipid- and water-soluble antioxidants in dogs with subclinical myxomatous mitral valve degeneration anaesthetised with propofol or sevoflurane
Cited by: 4
Author(s): Katerina Tomsič, Alenka Nemec Svete, Ana Nemec, Aleksandra Domanjko Petrič, Tatjana Pirman, Vida Rezar, Tomaž Vovk, Alenka Seliškar
Software Mentions: 1
Published: about 6 years ago
10.1186/s12917-015-0546-y
Endocrine control of canine mammary neoplasms: serum reproductive hormone levels and tissue expression of steroid hormone, prolactin and growth hormone receptors
Cited by: 19
Author(s): Michèle Spoerri, Franco Guscetti, Sonja Hartnack, Alois Boos, C.H.Y. Oei, Orsolya Balogh, Renata Nowaczyk, Erika Michel, Iris M Reichler, Mariusz P. Kowalewski
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pone.0207301
Effect of increasing heart rate on finger photoplethysmography fitness index (PPGF) in subjects with implanted cardiac pacemakers
Cited by: 5
Author(s): Amilia Aminuddin, Isabella Tan, Mark Butlin, Alberto Avolio, Hosen Kiat, Edward Barin, Nor Azlin Mohd Nordin, Kalaivani Chellappan
Software Mentions: 1
Published: almost 8 years ago
10.1186/1746-6148-9-145
Evaluation of immune and stress status in harbour porpoises (Phocoena phocoena): can hormones and mRNA expression levels serve as indicators to assess stress?
Cited by: 26
Author(s): Sabine Müller, Kristina Lehnert, Henrike Seibel, Jörg Driver, Katrin Ronnenberg, Jonas Teilmann, Cornelius van Elk, Jakob Kristensen, Eligius Everaarts, Ursula Siebert
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0143521
Fitting and Calibrating a Multilevel Mixed-Effects Stem Taper Model for Maritime Pine in NW Spain
Cited by: 22
Author(s): Manuel Arias-Rodil, Fernando Castedo‐Dorado, Asunción Cámara-Obregón, Ulises Diéguez-Aranda
Software Mentions: 1
Published: almost 11 years ago
10.1186/1756-0500-4-431
Food supplements increase adult tarsus length, but not growth rate, in an island population of house sparrows (Passer domesticus)
Cited by: 19
Author(s): Ian R. Cleasby, Terry Burke, Julia Schroeder, Shinichi Nakagawa
Software Mentions: 1
Published: about 15 years ago
10.1371/journal.pone.0123828
Long Recording Sequences: How to Track the Intra-Individual Variability of Acoustic Signals
Cited by: 2
Author(s): Thierry Lengagne, Doris Gomez, Rémy Josserand, Yann Voituron
Software Mentions: 1
Published: over 11 years ago
10.1186/1756-0500-6-264
Control and target gene selection for studies on UV-induced genotoxicity in whales
Cited by: 6
Author(s): Laura M. Martinez-Levasseur, Diane Gendron, Robert J. Knell, Karina Acevedo‐Whitehouse
Software Mentions: 1
Published: over 13 years ago
10.3390/foods10051099
Omnibus Modeling of Listeria monocytogenes Growth Rates at Low Temperatures
Cited by: 3
Author(s): Vincenzo Pennone, Úrsula Gonzales-Barrón, Kevin Hunt, Vasco Cadavez, Olivia McAuliffe, Francis Butler
Software Mentions: 1
Published: over 5 years ago
10.3390/foods10020261
Children’s Fruit and Vegetable Preferences Are Associated with Their Mothers’ and Fathers’ Preferences
Cited by: 8
Author(s): Kaisa Kähkönen, Mari Sandell, Anna Rönkä, Mika Hujo, Outi Nuutinen
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0159389
Fast Filtration of Bacterial or Mammalian Suspension Cell Cultures for Optimal Metabolomics Results
Cited by: 22
Author(s): Natalie Bordag, Vijay Manikandan Janakiraman, Jonny Nachtigall, Sandra González Maldonado, Bianca Bethan, Jean Lainé, Elie Fux
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0035870
Plastic Traits of an Exotic Grass Contribute to Its Abundance but Are Not Always Favourable
Cited by: 24
Author(s): Jennifer Firn, Suzanne M. Prober, Yvonne M. Buckley
Software Mentions: 1
Published: over 14 years ago
10.1371/journal.pone.0010834
Bacterial Biodiversity-Ecosystem Functioning Relations Are Modified by Environmental Complexity
Cited by: 151
Author(s): Silke Langenheder, Mark T. Bulling, Martin Solan, James I. Prosser
Software Mentions: 1
Published: over 16 years ago
10.1371/journal.pone.0091204
Effects of Soil Warming and Nitrogen Addition on Soil Respiration in a New Zealand Tussock Grassland
Cited by: 41
Author(s): Scott L. Graham, John E. Hunt, P. Millard, T. M. McSeveny, Jason M. Tylianakis, David Whitehead
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0126140
Tree Species Composition and Harvest Intensity Affect Herbivore Density and Leaf Damage on Beech, Fagus sylvatica, in Different Landscape Contexts
Cited by: 6
Author(s): Jule Mangels, Nico Blüthgen, Kevin Frank, Fabrice Grassein, Andrea Hilpert, Karsten Mody
Software Mentions: 1
Published: over 11 years ago
10.1186/1471-2458-14-911
Leptin and smoking cessation: secondary analyses of a randomized controlled trial assessing physical activity as an aid for smoking cessation
Cited by: 13
Author(s): Semira Gonseth, Isabella Locatelli, Raphaël Bize, Sébastien Nusslé, Carole Clair, François P. Pralong, Jacques Cornuz
Software Mentions: 1
Published: about 12 years ago
10.3390/ani10010172
The Influence of Temperament on Body Temperature Response to Handling in Angus Cattle
Cited by: 19
Author(s): A. M. Lees, Hannah E. Salvin, Ian G. Colditz, Caroline Lee
Software Mentions: 1
Published: almost 7 years ago
10.1186/s12889-016-3330-4
Effectiveness evaluation of a health promotion programme in primary schools: a cluster randomised controlled trial
Cited by: 15
Author(s): Ludwig Grillich, Christina Kien, Takuya Yanagida, Michael Weber, Gerald Gartlehner
Software Mentions: 1
Published: over 10 years ago
10.3389/fnagi.2021.610839
No Evidence That Cognitive and Physical Activities Are Related to Changes in EEG Markers of Cognition in Older Adults at Risk of Dementia
Cited by: 0
Author(s): Daria Laptinskaya, Olivia C. Küster, Patrick Fissler, Franka Thurm, Christine A. F. Von Arnim, Iris‐Tatjana Kolassa
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0181916
Plantar pressures are elevated in people with longstanding diabetes-related foot ulcers during follow-up
Cited by: 24
Author(s): Malindu E. Fernando, Robert G. Crowther, Peter A Lazzarini, Saiumaeswar Yogakanthi, Kunwarjit S. Sangla, Petra Büttner, Rhondda Jones, Jonathan Golledge
Software Mentions: 1
Published: about 9 years ago
10.3389/fnagi.2020.553461
The Influence of Aging, Hearing, and Tinnitus on the Morphology of Cortical Gray Matter, Amygdala, and Hippocampus
Cited by: 14
Author(s): Oliver Profant, Antonín Škoch, Jaroslav Tintěra, Veronika Svobodová, Diana Kuchárová, Jana Burianová, Josef Syka
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12889-017-4998-9
Effectiveness of employer financial incentives in reducing time to report worker injury: an interrupted time series study of two Australian workers’ compensation jurisdictions
Cited by: 19
Author(s): Tyler Lane, Shannon Gray, Behrooz Hassani-Mahmooei, Alex Collie
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0022221
Immune Activation Reduces Sperm Quality in the Great Tit
Cited by: 49
Author(s): Sylvain Losdat, Heinz Richner, Jonathan D. Blount, Fabrice Helfenstein
Software Mentions: 1
Published: over 15 years ago
10.1371/journal.pone.0206149
Photosynthesis limitations in cacao leaves under different agroforestry systems in the Colombian Amazon
Cited by: 26
Author(s): Juan Carlos Suárez, Luz Marina Melgarejo, Fernando Casanoves, Julio A. Di Rienzo, Fábio M. DaMatta, Cristina Armas
Software Mentions: 1
Published: about 8 years ago
10.1186/s12889-019-6897-8
A three-year multifaceted intervention to prevent obesity in children of Mexican-heritage
Cited by: 8
Author(s): Banafsheh Sadeghi, Lucía Kaiser, M. Hanbury, Iraklis Erik Tseregounis, Ulfat Shaikh, Rosa Gomez-Camacho, Rex C. Y. Cheung, Albert Aguilera, Linda Whent, Adela de la Torre
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0192044
The pickup of visual information about size and location during approach to an obstacle
Cited by: 14
Author(s): Gabriel Díaz, Melissa Parade, Sean L. Barton, Brett R. Fajen
Software Mentions: 1
Published: almost 9 years ago
10.3389/fnbeh.2016.00168
Altered Electroencephalographic Activity Associated with Changes in the Sleep-Wakefulness Cycle of C57BL/6J Mice in Response to a Photoperiod Shortening
Cited by: 5
Author(s): Stanislav Rozov, Janneke C. Zant, Kestutis Gurevicius, Tarja Porkka‐Heiskanen, Pertti Panula
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0101237
The Predictive Value of Early Behavioural Assessments in Pet Dogs – A Longitudinal Study from Neonates to Adults
Cited by: 43
Author(s): Stefanie Riemer, Corsin A. Müller, Zsófia Virányi, Ludwig Huber, Friederike Range
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0045334
Understanding Long-Term Variations in an Elephant Piosphere Effect to Manage Impacts
Cited by: 38
Author(s): Marietjie Landman, David S. Schoeman, A.J. Hall-Martin, Graham I. H. Kerley
Software Mentions: 1
Published: about 14 years ago
10.1371/journal.pone.0154732
Taking Perspective: Personal Pronouns Affect Experiential Aspects of Literary Reading
Cited by: 52
Author(s): Franziska Hartung, Michael Burke, Peter Hagoort, Roel M. Willems
Software Mentions: 1
Published: over 10 years ago
10.3389/fdata.2020.00024
Statistical Disease Progression Modeling in Alzheimer Disease
Cited by: 30
Author(s): Lars Lau Rakêt
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-64108-y
Bryophytes can recognize their neighbours through volatile organic compounds
Cited by: 27
Author(s): Eliška Vicherová, Robert Glinwood, Tomáš Hájek, Petr Šmilauer, Velemir Ninkovic
Software Mentions: 1
Published: over 6 years ago
10.3389/fbioe.2021.724304
Mixed Acid Fermentation of Carbohydrate-Rich Dairy Manure Hydrolysate
Cited by: 11
Author(s): Abel T. Ingle, Nathaniel W. Fortney, Kevin A. Walters, Timothy J. Donohue, Daniel R. Noguera
Software Mentions: 1
Published: over 5 years ago
10.3389/fbioe.2019.00163
Probing ADP Induced Aggregation Kinetics During Platelet-Nanoparticle Interactions: Functional Dynamics Analysis to Rationalize Safety and Benefits
Cited by: 10
Author(s): Souvik Bandyopadhyay, Mohammad Azharuddin, Anjan Kr-R. Dasgupta, Bhaswati Ganguli, Sugata SenRoy, Hirak K. Patra, Suryyani Deb
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0180269
Living on the edge: Daily, seasonal and annual body temperature patterns of Arabian oryx in Saudi Arabia
Cited by: 7
Author(s): Sonja Streicher, Heike Lutermann, Nigel C. Bennett, Mads F. Bertelsen, Osama B. Mohammed, Paul R. Manger, Michael Scantlebury, Khairi Ismael, Abdulaziz N. Alagaili
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0203910
Heterochrony of puberty in the European badger (Meles meles) can be explained by growth rate and group-size: Evidence for two endocrinological phenotypes
Cited by: 25
Author(s): Nadine Adrianna Sugianto, Chris Newman, David W. Macdonald, Christina D. Buesching
Software Mentions: 1
Published: over 7 years ago
10.1007/s11060-019-03240-w
Multidimensional assessment of fatigue in patients with brain metastases before and after Gamma Knife radiosurgery
Cited by: 4
Author(s): Eline Verhaak, Wietske C. M. Schimmel, Margriet M. Sitskoorn, Marjan Bakker, Patrick Hanssens, Karin Gehring
Software Mentions: 1
Published: over 7 years ago
10.1186/s40359-016-0168-6
Attentional and affective consequences of technology supported mindfulness training: a randomised, active control, efficacy trial
Cited by: 77
Author(s): Sheffy Bhayee, Patricia Tomaszewski, Daniel H. Lee, Graeme Moffat, Lou Pino, Sylvain Moreno, Norman A. S. Farb
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0046140
Profiling the Anaerobic Response of C. elegans Using GC-MS
Cited by: 33
Author(s): Jeffrey A. Butler, Robert J. Mishur, Alex Bokov, Kevin Hakala, Susan T. Weintraub, Shane L. Rea
Software Mentions: 1
Published: about 14 years ago
10.1371/journal.pone.0173819
Seasonal changes in the digesta-adherent rumen bacterial communities of dairy cattle grazing pasture
Cited by: 36
Author(s): Samantha Joan Noel, Graeme T. Attwood, Jasna Rakonjac, Christina D. Moon, G. C. Waghorn, Peter H. Janssen
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0149594
Quantifying Migration Behaviour Using Net Squared Displacement Approach: Clarifications and Caveats
Cited by: 29
Author(s): Navinder J. Singh, Andrew M. Allen, Göran Ericsson
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0107388
Butyrate Increases Intracellular Calcium Levels and Enhances Growth Hormone Release from Rat Anterior Pituitary Cells via the G-Protein-Coupled Receptors GPR41 and 43
Cited by: 34
Author(s): Maria Consolata Miletta, Vibor Petkovic, Andrée Eblé, Roland A. Ammann, Christa E. Flück, Primus-E. Mullis
Software Mentions: 1
Published: about 12 years ago
10.3389/fcimb.2014.00177
Mathematical modeling provides kinetic details of the human immune response to vaccination
Cited by: 37
Author(s): Dustin Le, Joseph D. Miller, Vitaly V. Ganusov
Software Mentions: 1
Published: almost 12 years ago
10.3389/fcimb.2020.00427
Phlebotomus perniciosus Recombinant Salivary Proteins Polarize Murine Macrophages Toward the Anti-Inflammatory Phenotype
Cited by: 6
Author(s): Petra Sumová, Nikola Polanská, Tereza Leštinová, Tatiana Spitzová, Barbora Kalousková, Ondřej Vaněk, Petr Volf, Iva Rohoušová
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-64780-0
Potential bio-indicators for assessment of mineral status in elephants
Cited by: 3
Author(s): Fiona Sach, Ellen S. Dierenfeld, Simon C. Langley‐Evans, Elliott M. Hamilton, R. Murray Lark, Lisa Yon, Michael J. Watts
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0175509
Active transforming growth factor-β2 in the aqueous humor of posterior polymorphous corneal dystrophy patients
Cited by: 4
Author(s): Andrea Stadnikova, Ľubica Ďuďáková, Pavlína Skalická, Zdeněk Valenta, Martin Filipec, Kateřina Jirsová
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0071760
Internet-Based Attention Bias Modification for Social Anxiety: A Randomised Controlled Comparison of Training towards Negative and Training Towards Positive Cues
Cited by: 93
Author(s): Johanna Boettcher, Linda Leek, Lisa Matson, Emily A. Holmes, Michael Browning, Colin MacLeod, Gerhard Andersson, Per Carlbring
Software Mentions: 1
Published: about 13 years ago
10.1038/s41598-020-65220-9
Warming and acidification threaten glass sponge Aphrocallistes vastus pumping and reef formation
Cited by: 12
Author(s): Angela Stevenson, Stephanie K. Archer, Jessica Schultz, Anya Dunham, Jeffrey B. Marliave, Patrick T. Martone, Christopher D. G. Harley
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0184687
Residential development alters behavior, movement, and energetics in an apex predator, the puma
Cited by: 46
Author(s): Yiwei Wang, Justine A. Smith, Christopher C. Wilmers
Software Mentions: 1
Published: about 9 years ago
10.1186/s40359-021-00511-y
Change in quality of life and self-esteem in a randomized controlled CBT study for anxious and sad children: can targeting anxious and depressive symptoms improve functional domains in schoolchildren?
Cited by: 13
Author(s): K Martinsen, Lene-Mari Potulski Rasmussen, Tore Wentzel‐Larsen, Solveig Holen, Anne Mari Sund, Marit Løtveit Pedersen, Mona Elisabeth S Løvaas, Joshua Patras, Frode Adolfsen, Simon-Peter Neumer
Software Mentions: 1
Published: almost 6 years ago