Projects: cran: nlme
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/nlme
Linear and Nonlinear Mixed Effects Models
147 versions
Latest release: about 3 years ago
431 dependent packages
137,096 downloads last month
Science Score: 100/100
Starting Score: 100 points
Bonuses:
Very Likely Science (100)
Papers Mentioning nlme 3,265
10.1371/journal.pone.0067722
Negative Priming Effect on Organic Matter Mineralisation in NE Atlantic Slope SedimentsCited by: 46
Author(s): Evangelia Gontikaki, Barry Thornton, Veerle A.I. Huvenne, Ursula Witte
Software Mentions: 1
Published: about 13 years ago
10.7554/eLife.47027
Population rate-coding predicts correctly that human sound localization depends on sound intensityCited by: 4
Author(s): Antje Ihlefeld, Nima Alamatsaz, Robert Shapley
Software Mentions: 1
Published: almost 7 years ago
10.7554/eLife.32937
Neurogenic decisions require a cell cycle independent function of the CDC25B phosphataseCited by: 14
Author(s): Frédéric Bonnet, Angie Molina, Mélanie Roussat, Manon Azaïs, Sophie Bel-Vialar, Jacques Gautrais, Fabienne Pituello, Eric Agius
Software Mentions: 1
Published: about 8 years ago
10.3389/fpls.2016.01872
Modulation of Legume Defense Signaling Pathways by Native and Non-native Pea Aphid ClonesCited by: 19
Author(s): Carlos Sanchez-Arcos, Michael Reichelt, Jonathan Gershenzon, Grit Kunert
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0091633
Gender, Season and Management Affect Fecal Glucocorticoid Metabolite Concentrations in Captive Goral (Naemorhedus griseus) in ThailandCited by: 15
Author(s): Jaruwan Khonmee, Janine L. Brown, S. Rojanasthien, Anurut Aunsusin, Dissakul Thumasanukul, Adisorn Kongphoemphun, Boripat Siriaroonrat, Wanlaya Tipkantha, Veerasak Punyapornwithaya, Chatchote Thitaram
Software Mentions: 1
Published: over 12 years ago
10.7554/eLife.62051
The temporal representation of experience in subjective moodCited by: 10
Author(s): Hanna Keren, Charles Zheng, David C. Jangraw, Kai-Ting Chang, Aria Vitale, Robb B. Rutledge, Francisco Pereira, Dylan M. Nielson, Argyris Stringaris
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0161794
Let the Avatar Brighten Your Smile: Effects of Enhancing Facial Expressions in Virtual EnvironmentsCited by: 66
Author(s): Soo Youn Oh, Jeremy N. Bailenson, Nicole C. Krämer, Benjamin J. Li
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0228830
Implicit food odour priming effects on reactivity and inhibitory control towards foodsCited by: 7
Author(s): Marine Mas, Marie‐Claude Brindisi, Claire Chabanet, Stéphanie Chambaron
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0167114
Association of Hip Bone Mineral Density and Body Composition in a Rural Indian Population: The Andhra Pradesh Children and Parents Study (APCAPS)Cited by: 10
Author(s): Mika Matsuzaki, Bharati Kulkarni, Hannah Kuper, Jonathan C. K. Wells, George B. Ploubidis, Poornima Prabhakaran, Vipin Gupta, Gagandeep Kaur Walia, Apoorva Aggarwal, Dorairaj Prabhakaran, George Davey Smith, K. V. Radhakrishna, Yoav Ben-Shlomo, Sanjay Kinra
Software Mentions: 1
Published: over 9 years ago
10.1098/rsos.160583
Clever mothers balance time and effort in parental care: a study on free-ranging dogsCited by: 11
Author(s): Manabi Paul, Shubhra Sau, Anjan K. Nandi, Anindita Bhadra
Software Mentions: 1
Published: over 9 years ago
10.3389/fpls.2021.660620
Integrated Genomic and Greenhouse Assessment of a Novel Plant Growth-Promoting Rhizobacterium for Tomato PlantCited by: 10
Author(s): Maria Chiara Guerrieri, Andrea Fiorini, Elisabetta Fanfoni, Vincenzo Tabaglio, Pier Sandro Cocconcelli, Marco Trevisan, Edoardo Puglisi
Software Mentions: 1
Published: over 5 years ago
10.6028/jres.116.004
Maximum Likelihood and Restricted Likelihood Solutions in Multiple-Method StudiesCited by: 9
Author(s): Andrew L. Rukhin
Software Mentions: 1
Published: over 15 years ago
10.3389/fpls.2019.01097
Soil Warming Accelerates Biogeochemical Silica Cycling in a Temperate ForestCited by: 10
Author(s): Jonathan Gewirtzman, Jianwu Tang, Jerry M. Melillo, W.J. Werner, A. C. Kurtz, Robinson W. Fulweiler, Joanna C. Carey
Software Mentions: 1
Published: about 7 years ago
10.3389/fpls.2018.01582
Radial Growth and Wood Density Reflect the Impacts and Susceptibility to Defoliation by Gypsy Moth and Climate in Radiata PineCited by: 10
Author(s): J. Julio Camarero, María Flor Álvarez Taboada, Andrea Hevia, Fernando Castedo‐Dorado
Software Mentions: 1
Published: almost 8 years ago
10.3389/fpls.2017.02128
Tomato Reproductive Success Is Equally Affected by Herbivores That Induce or That Suppress DefensesCited by: 11
Author(s): Jie Liu, Saioa Legarrea, Merijn R. Kant
Software Mentions: 1
Published: almost 9 years ago
10.1098/rsos.170312
Familiarity affects collective motion in shoals of guppies ( <i>Poecilia reticulata</i> )Cited by: 18
Author(s): Scarlet Davis, Ryan Lukeman, Timothy M. Schaerf, Ashley J. W. Ward
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0086101
Genome-Wide Gene Expression Profiles in Lung Tissues of Pig Breeds Differing in Resistance to Porcine Reproductive and Respiratory Syndrome VirusCited by: 21
Author(s): Jinyan Xing, Xing Feng, Chenhua Zhang, Yujie Zhang, Nan Wang, Yanping Li, Lijuan Yang, Chaowei Jiang, Chaoyang Zhang, Changhong Wen, Yuming Jiang
Software Mentions: 1
Published: over 12 years ago
10.1098/rsos.170918
Group foraging increases foraging efficiency in a piscivorous diver, the African penguinCited by: 37
Author(s): Alistair McInnes, Cuan McGeorge, Samuel Ginsberg, Lorien Pichegru, Pierre A. Pistorius
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0152709
Selenium Digestibility and Bioactivity in Dogs: What the Can Can, the Kibble Can’tCited by: 8
Author(s): Marielle Van Zelst, Myriam Hesta, Kerry Gray, Karen Beech, An Cools, Lucille Alexander, Gijs Du Laing, Geert Janssens
Software Mentions: 1
Published: over 10 years ago
10.3389/fpls.2016.00418
Limited Growth Recovery after Drought-Induced Forest Dieback in Very Defoliated Trees of Two Pine SpeciesCited by: 47
Author(s): Guillermo Guada, J. Julio Camarero, Raúl Sánchez‐Salguero, Rafael María Navarro Cerrillo
Software Mentions: 1
Published: over 10 years ago
10.3389/fpls.2018.00145
Barley yellow dwarf virus Infection Leads to Higher Chemical Defense Signals and Lower Electrophysiological Reactions in Susceptible Compared to Tolerant Barley GenotypesCited by: 14
Author(s): Maria K. Paulmann, Grit Kunert, Matthias R. Zimmermann, Nina Theis, Anatoli Ludwig, Doreen Meichsner, Ralf Oelmüller, Jonathan Gershenzon, Antje Habekuß, Frank Ordon, Alexandra C. U. Furch, Torsten Will
Software Mentions: 1
Published: over 8 years ago
10.1098/rsos.171791
Early development of vocal interaction rules in a duetting songbirdCited by: 25
Author(s): Karla D. Rivera‐Cáceres, Esmeralda Quirós‐Guerrero, Marcelo Araya‐Salas, Christopher N. Templeton, William A. Searcy
Software Mentions: 1
Published: over 8 years ago
10.3389/fpls.2017.00314
Chronological Sequence of Leaf Phenology, Xylem and Phloem Formation and Sap Flow of Quercus pubescens from Abandoned Karst GrasslandsCited by: 32
Author(s): Martina Lavrič, Klemen Eler, Mitja Ferlan, Dominik Vodnik, Jožica Gričar
Software Mentions: 1
Published: over 9 years ago
10.3389/fpls.2016.01253
Does Size Matter? Atmospheric CO2 May Be a Stronger Driver of Stomatal Closing Rate Than Stomatal Size in Taxa That Diversified under Low CO2Cited by: 68
Author(s): Caroline Elliott-Kingston, Matthew Haworth, Jonathan M. Yearsley, Sven P. Batke, Tracy Lawson, Jennifer C. McElwain
Software Mentions: 1
Published: about 10 years ago
10.1098/rsos.172193
Resurrected ‘ancient’ <i>Daphnia</i> genotypes show reduced thermal stress tolerance compared to modern descendantsCited by: 31
Author(s): Aime'e M. Yousey, Priyanka Chowdhury, Nicole Biddinger, Jennifer H. Shaw, Punidan D. Jeyasingh, Lawrence J. Weider
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0182233
Group elicitations yield more consistent, yet more uncertain experts in understanding risks to ecosystem services in New Zealand baysCited by: 17
Author(s): Gerald G. Singh, Jim Sinner, Joanne I. Ellis, Milind Kandlikar, Benjamin S. Halpern, Terre Satterfield, Kai M. A. Chan
Software Mentions: 1
Published: about 9 years ago
10.1098/rsos.181760
Private parts for private property: evolution of penis size with more valuable, easily stolen shellsCited by: 8
Author(s): Mark E. Laidre
Software Mentions: 1
Published: over 7 years ago
10.1098/rsos.190060
The impact of pelvic lateral rotation on hindlimb kinematics and stride length in the red-legged running frog,<i>Kassina maculata</i>Cited by: 5
Author(s): Amber J. Collings, Laura B. Porro, Charles W. L. Hill, Christopher T. Richards
Software Mentions: 1
Published: over 7 years ago
10.7554/eLife.38215
Adaptation after vastus lateralis denervation in rats demonstrates neural regulation of joint stresses and strainsCited by: 28
Author(s): Cristiano Alessandro, Benjamin A. Rellinger, Filipe O. Barroso, Matthew C. Tresch
Software Mentions: 1
Published: about 8 years ago
10.3389/fpls.2016.01261
Evolution of Specialization of Cassida rubiginosa on Cirsium arvense (Compositae, Cardueae)Cited by: 9
Author(s): Michael G. Cripps, Sarah Jackman, Cristina Roquet, Chikako van Koten, Michael Rostás, G. W. Bourdôt, Alfonso Susanna
Software Mentions: 1
Published: about 10 years ago
10.3389/fpls.2021.648312
Evolvability of Drought Response in Four Native and Non-native Conifers: Opportunities for Forest and Genetic Resource Management in EuropeCited by: 9
Author(s): Silvio Schueler, Jan-Peter George, Sandra Karanitsch-Ackerl, Konrad Mayer, Raphaël Klumpp, Michael Grabner
Software Mentions: 1
Published: about 5 years ago
10.3389/fpls.2020.00312
Nitrogen Depletion Blocks Growth Stimulation Driven by the Expression of Nitric Oxide Synthase in TobaccoCited by: 9
Author(s): Andrés Nejamkin, Noelia Foresi, Martín Leonardo Mayta, Anabella F. Lodeyro, Fiorella Del Castello, Natalia Correa‐Aragunde, Néstor Carrillo, Lorenzo Lamattina
Software Mentions: 1
Published: over 6 years ago
10.3389/fimmu.2018.00003
Corticosterone Preexposure Increases NF-κB Translocation and Sensitizes IL-1β Responses in BV2 Microglia-Like CellsCited by: 18
Author(s): Jiajun Liu, Sanam Mustafa, Daniel T. Barratt, Mark R. Hutchinson
Software Mentions: 1
Published: over 8 years ago
10.3389/fimmu.2021.684147
Modeling Influencing Factors in B-Cell Reconstitution After Hematopoietic Stem Cell Transplantation in ChildrenCited by: 5
Author(s): Nicolaas G. van der Maas, Erik G J von Asmuth, Dagmar Berghuis, Pauline A. van Schouwenburg, Hein Putter, Mirjam van der Burg, Arjan C. Lankester
Software Mentions: 1
Published: over 5 years ago
10.3389/fimmu.2020.01427
Human Milk From Atopic Mothers Has Lower Levels of Short Chain Fatty AcidsCited by: 45
Author(s): Lisa F. Stinson, Petya Koleva, Merete Eggesbø, Christine Cole Johnson, Ganesa Wegienka, Elloise du Toit, Naoki Shimojo, Daniel Munblit, Dianne E. Campbell, Susan L. Prescott, Donna T. Geddes, Anita L. Kozyrskyj
Software Mentions: 1
Published: about 6 years ago
10.1098/rsos.191841
Native and invasive squirrels show different behavioural responses to scent of a shared native predatorCited by: 19
Author(s): Joshua P. Twining, W. Ian Montgomery, Lily Price, Hansjoerg P. Kunc, David G. Tosh
Software Mentions: 1
Published: over 6 years ago
10.1098/rsos.200049
In the face of climate change and exhaustive exercise: the physiological response of an important recreational fish speciesCited by: 11
Author(s): Daniel P. Crear, Richard W. Brill, Lauren M.L. Averilla, Sara C. Meakem, Kevin C. Weng
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0050429
Evaluating the Impact of Handling and Logger Attachment on Foraging Parameters and Physiology in Southern Rockhopper PenguinsCited by: 37
Author(s): Katrin Ludynia, Nina Dehnhard, Maud Poisbleau, Laurent Demongin, Juan F. Masello, Petra Quillfeldt
Software Mentions: 1
Published: almost 14 years ago
10.3389/fnhum.2017.00110
No Evidence That Short-Term Cognitive or Physical Training Programs or Lifestyles Are Related to Changes in White Matter Integrity in Older Adults at Risk of DementiaCited by: 21
Author(s): Patrick Fissler, Hans‐Peter Müller, Olivia C. Küster, Daria Laptinskaya, Franka Thurm, Alexander Wöll, Thomas Elbert, Jan Kassubek, Christine A. F. Von Arnim, Iris‐Tatjana Kolassa
Software Mentions: 1
Published: over 9 years ago
10.3389/fcimb.2020.00427
Phlebotomus perniciosus Recombinant Salivary Proteins Polarize Murine Macrophages Toward the Anti-Inflammatory PhenotypeCited by: 6
Author(s): Petra Sumová, Nikola Polanská, Tereza Leštinová, Tatiana Spitzová, Barbora Kalousková, Ondřej Vaněk, Petr Volf, Iva Rohoušová
Software Mentions: 1
Published: about 6 years ago
10.3389/fcimb.2014.00177
Mathematical modeling provides kinetic details of the human immune response to vaccinationCited by: 37
Author(s): Dustin Le, Joseph D. Miller, Vitaly V. Ganusov
Software Mentions: 1
Published: over 11 years ago
10.3389/fbioe.2019.00163
Probing ADP Induced Aggregation Kinetics During Platelet-Nanoparticle Interactions: Functional Dynamics Analysis to Rationalize Safety and BenefitsCited by: 10
Author(s): Souvik Bandyopadhyay, Mohammad Azharuddin, Anjan Kr-R. Dasgupta, Bhaswati Ganguli, Sugata SenRoy, Hirak K. Patra, Suryyani Deb
Software Mentions: 1
Published: about 7 years ago
10.3389/fbioe.2021.724304
Mixed Acid Fermentation of Carbohydrate-Rich Dairy Manure HydrolysateCited by: 11
Author(s): Abel T. Ingle, Nathaniel W. Fortney, Kevin A. Walters, Timothy J. Donohue, Daniel R. Noguera
Software Mentions: 1
Published: about 5 years ago
10.1098/rsos.200789
Depth-dependent dive kinematics suggest cost-efficient foraging strategies by tiger sharksCited by: 11
Author(s): Samantha Andrzejaczek, Adrian C. Gleiss, Karissa O. Lear, Charitha Pattiaratchi, Taylor K. Chapple, Mark G. Meekan
Software Mentions: 1
Published: about 6 years ago
10.7554/eLife.36395
Model-based fMRI reveals dissimilarity processes underlying base rate neglectCited by: 10
Author(s): Sean O’Bryan, Darrell A. Worthy, Evan J. Livesey, Tyler Davis
Software Mentions: 1
Published: about 8 years ago
10.1098/rsos.191983
The pantophysin gene and its relationship with survival in early life stages of Atlantic codCited by: 1
Author(s): Håkon Otterå, Torild Johansen, Arild Folkvord, Geir Dahle, Marte Kristine Solvang Bingh, Jon‐Ivar Westgaard, Kevin A. Glover
Software Mentions: 1
Published: almost 6 years ago
10.3389/fdata.2020.00024
Statistical Disease Progression Modeling in Alzheimer DiseaseCited by: 30
Author(s): Lars Lau Rakêt
Software Mentions: 1
Published: about 6 years ago
10.3389/fnbeh.2016.00168
Altered Electroencephalographic Activity Associated with Changes in the Sleep-Wakefulness Cycle of C57BL/6J Mice in Response to a Photoperiod ShorteningCited by: 5
Author(s): Stanislav Rozov, Janneke C. Zant, Kestutis Gurevicius, Tarja Porkka‐Heiskanen, Pertti Panula
Software Mentions: 1
Published: about 10 years ago
10.3389/fnagi.2020.553461
The Influence of Aging, Hearing, and Tinnitus on the Morphology of Cortical Gray Matter, Amygdala, and HippocampusCited by: 14
Author(s): Oliver Profant, Antonín Škoch, Jaroslav Tintěra, Veronika Svobodová, Diana Kuchárová, Jana Burianová, Josef Syka
Software Mentions: 1
Published: almost 6 years ago
10.1007/s00411-012-0451-8
Are mouse lens epithelial cells more sensitive to γ-irradiation than lymphocytes?Cited by: 22
Author(s): Kristina Bannik, Ute Rößler, Theresa Faus‐Kessler, Maria Gomolka, Sabine Hornhardt, Claudia Dalke, Olena Klymenko, Michael Rosemann, Klaus-Rüdiger Trott, Michael J. Atkinson, Ulrike Kulka, Jochen Graw
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0112437
Positive Effects of Non-Native Grasses on the Growth of a Native Annual in a Southern California EcosystemCited by: 3
Author(s): Gregory J. Pec, Gary C. Carlton
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0163213
Energy Reserves, Information Need and a Pinch of Personality Determine Decision-Making on Route in Partially Migratory Blue TitsCited by: 6
Author(s): Anna Nilsson, Jan Nilsson, Claudia Mettke-Hofmann
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0156057
Effect of Phytoplankton Richness on Phytoplankton Biomass Is Weak Where the Distribution of Herbivores is PatchyCited by: 2
Author(s): Jerome J. Weis
Software Mentions: 1
Published: over 10 years ago
10.1002/jrsm.1434
Meta‐analysis of continuous outcomes: Using pseudo <scp>IPD</scp> created from aggregate data to adjust for baseline imbalance and assess treatment‐by‐baseline modificationCited by: 15
Author(s): Katerina Papadimitropoulou, Theo Stijnen, Richard D Riley, Olaf M. Dekkers, Saskia le Cessie
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0072862
New Insights into Non-Avian Dinosaur Reproduction and Their Evolutionary and Ecological Implications: Linking Fossil Evidence to Allometries of Extant Close RelativesCited by: 24
Author(s): Jan Werner, Eva Maria Griebeler
Software Mentions: 1
Published: about 13 years ago
10.1186/s12931-017-0713-8
Biomarkers of inflammation in infants with cystic fibrosisCited by: 12
Author(s): Theresa A. Laguna, Cynthia Williams, Myra G. Nunez, Cole Welchlin-Bradford, Catherine E. Moen, Cavan Reilly, Chris H. Wendt
Software Mentions: 1
Published: over 8 years ago
10.3390/ijms20246201
Modeling the Effects of Severe Metabolic Disease by Genome Editing of hPSC-Derived Endothelial Cells Reveals an Inflammatory PhenotypeCited by: 3
Author(s): Filip Roudnicky, Yanjun Lan, Max Friesen, Gregor Dernick, Jitao David Zhang, Andreas Staempfli, Natalie Bordag, Antje Wagner-Golbs, Klaus Christensen, Martin Ebeling, Martin Gräf, Mark Burcin, Claas A. Meyer, Chad A. Cowan, Christoph Patsch
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0140384
Convergent Evolution towards High Net Carbon Gain Efficiency Contributes to the Shade Tolerance of Palms (Arecaceae)Cited by: 9
Author(s): Ren-Yi Ma, Jiao‐Lin Zhang, Molly A. Cavaleri, Frank J. Sterck, Joeri S. Strijk, Kun‐Fang Cao
Software Mentions: 1
Published: almost 11 years ago
10.3390/ijms21155188
Characterization of Fluid Biomarkers Reveals Lysosome Dysfunction and Neurodegeneration in Neuronopathic MPS II PatientsCited by: 12
Author(s): Akhil Bhalla, Ritesh Ravi, Meng Fang, Annie Arguello, Sonnet S. Davis, Chi-Lu Chiu, Jessica Blumenfeld, Hoang Nguyen, Timothy Earr, Junhua Wang, Giuseppe Astarita, Yuda Zhu, Damian Fiore, Kimberly Scearce‐Levie, Dolores Diaz, Heather Cahan, Matthew D. Troyer, Jeffrey M. Harris, Maria L. Escolar
Software Mentions: 1
Published: about 6 years ago
10.1186/1757-7241-18-29
Capillary leakage in post-cardiac arrest survivors during therapeutic hypothermia - a prospective, randomised studyCited by: 29
Author(s): Bård E. Heradstveit, Anne Berit Guttormsen, Jørund Langørgen, Stig Hammersborg, Tore Wentzel‐Larsen, Rune Fanebust, Elna‐Marie Larsson, Jon-Kenneth Heltne
Software Mentions: 1
Published: over 16 years ago
10.1186/s13049-014-0073-z
Correction of hypothermic and dilutional coagulopathy with concentrates of fibrinogen and factor XIII: an in vitro study with ROTEMCited by: 22
Author(s): Dag Winstedt, Owain Thomas, Nilsson La, Knut Olanders, Ulf Schött
Software Mentions: 1
Published: almost 12 years ago
10.1186/s13049-017-0442-5
Factors influencing on-scene time in a rural Norwegian helicopter emergency medical service: a retrospective observational studyCited by: 16
Author(s): Øyvind Østerås, Jon-Kenneth Heltne, Bjørn-Christian Vikenes, Jörg Aßmus, Guttorm Brattebø
Software Mentions: 1
Published: almost 9 years ago
10.3390/ijms21176055
Analysis of Early Cone Dysfunction in an In Vivo Model of Rod-Cone DystrophyCited by: 2
Author(s): Mark Hassall, Michelle E. McClements, Alun R. Barnard, Maria I. Patrício, Sher A. Aslam, Robert E. MacLaren
Software Mentions: 1
Published: about 6 years ago
10.3389/fnagi.2021.610839
No Evidence That Cognitive and Physical Activities Are Related to Changes in EEG Markers of Cognition in Older Adults at Risk of DementiaCited by: 0
Author(s): Daria Laptinskaya, Olivia C. Küster, Patrick Fissler, Franka Thurm, Christine A. F. Von Arnim, Iris‐Tatjana Kolassa
Software Mentions: 1
Published: over 5 years ago