Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: mvabund

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/mvabund

Statistical Methods for Analysing Multivariate Abundance Data
38 versions
Latest release: over 2 years ago
9 dependent packages
2,409 downloads last month

Papers Mentioning mvabund 112

10.1111/mec.15250
Demographic and environmental drivers of metagenomic viral diversity in vampire bats
Cited by: 57
Author(s): Laura M. Bergner, Richard Orton, Julio A. Benavides, Daniel J. Becker, Carlos Tello, Roman Biek, Daniel G. Streicker
Software Mentions: 16
Published: almost 5 years ago
10.1038/s41598-018-23518-9
The effects of host species and sexual dimorphism differ among root, leaf and flower microbiomes of wild strawberries in situ
Cited by: 47
Author(s): Na Wei, Tia‐Lynn Ashman
Software Mentions: 11
Published: over 6 years ago
10.1371/journal.pone.0238219
Ground-dwelling arthropods of pinyon-juniper woodlands: Arthropod community patterns are driven by climate and overall plant productivity, not host tree species
Cited by: 6
Author(s): Derek A. Uhey, Hannah Lee Riskas, Aaron D. Smith, Richard W. Hofstetter
Software Mentions: 11
Published: about 4 years ago
10.1186/s42523-020-00029-5
Microbiota characterization of Exaiptasia diaphana from the Great Barrier Reef
Cited by: 19
Author(s): Leon M. Hartman, Madeleine J. H. van Oppen, Linda L. Blackall
Software Mentions: 11
Published: over 4 years ago
10.1098/rspb.2020.2840
Predation favours <i>Bicyclus anynana</i> butterflies with fewer forewing eyespots
Cited by: 5
Author(s): Ian Z. W. Chan, Zhe Ching Ngan, Naing Lin, Yueying Lee, Vijayendran Gowri, Antónia Monteiro
Software Mentions: 10
Published: over 3 years ago
10.1128/mSphere.00537-20
Gut Microbiota Predict <i>Enterococcus</i> Expansion but Not Vancomycin-Resistant <i>Enterococcus</i> Acquisition
Cited by: 10
Author(s): Rishi Chanderraj, Christopher Brown, Kevin J. Hinkle, Nicole R. Falkowski, Piyush Ranjan, Robert P. Dickson, Robert J. Woods
Software Mentions: 9
Published: over 3 years ago
10.1111/1462-2920.14631
Effect of long‐term organic and mineral fertilization strategies on rhizosphere microbiota assemblage and performance of lettuce
Cited by: 41
Author(s): Soumitra Paul Chowdhury, Doreen Babin, Martin Sandmann, Samuel Jacquiod, Loreen Sommermann, Søren J. Sørensen, Andreas Fließbach, Paul Mäder, Joerg Geistlinger, Kornelia Smalla, Michael Rothballer, Rita Grosch
Software Mentions: 9
Published: over 5 years ago
10.1002/ece3.6079
Species specificity and intraspecific variation in the chemical profiles of <i>Heliconius</i> butterflies across a large geographic range
Cited by: 28
Author(s): Kathy Darragh, Gabriela Montejo‐Kovacevich, Krzysztof M. Kozak, Colin R. Morrison, Clarisse M. É. Figueiredo, Jonathan Stuart Ready, Camilo Salazar, Mauricio Linares, Kelsey J. R. P. Byers, Richard M. Merrill, W. Owen McMillan, Stefan Schulz, Chris D. Jiggins
Software Mentions: 9
Published: over 4 years ago
10.7717/peerj.9089
Resampling-based methods for biologists
Cited by: 35
Author(s): John Fieberg, Kelsey Vitense, Douglas H. Johnson
Software Mentions: 9
Published: over 4 years ago
10.3389/fmicb.2020.579427
Environmental and Microbial Interactions Shape Methane-Oxidizing Bacterial Communities in a Stratified Lake
Cited by: 12
Author(s): Carole Guggenheim, Remo Freimann, Magdalena Mayr, Karin Beck, Bernhard Wehrli, Helmut Bürgmann
Software Mentions: 8
Published: almost 4 years ago
10.1038/s41598-020-57622-6
Mainland and island populations of Mussaenda kwangtungensis differ in their phyllosphere fungal community composition and network structure
Cited by: 16
Author(s): Xin Qian, Shengchun Li, Bian Wu, Yong-Long Wang, Niu‐Niu Ji, Hui Yao, Hongyue Cai, Miaomiao Shi, Dianxiang Zhang
Software Mentions: 8
Published: over 4 years ago
10.1038/s41396-020-0654-y
Dark septate endophyte improves salt tolerance of native and invasive lineages of Phragmites australis
Cited by: 41
Author(s): Martina Gonzalez Mateu, Andrew H. Baldwin, Jude E. Maul, Stephanie A. Yarwood
Software Mentions: 7
Published: over 4 years ago
10.3390/microorganisms7090349
Site-Specific Microbial Decomposer Communities Do Not Imply Faster Decomposition: Results from a Litter Transplantation Experiment
Cited by: 16
Author(s): Aïda Bani, Luigimaria Borruso, Kirsty J. Matthews Nicholass, Tommaso Bardelli, Andrea Polo, Silvia Pioli, María Gómez-Brandòn, Heribert Insam, Alex J. Dumbrell, Lorenzo Brusetti
Software Mentions: 7
Published: about 5 years ago
10.1038/s41396-018-0176-z
Long-term in situ permafrost thaw effects on bacterial communities and potential aerobic respiration
Cited by: 64
Author(s): Sylvain Monteux, James T. Weedon, Gesche Blume‐Werry, Konstantin Gavazov, Vincent E. J. Jassey, Margareta Johansson, Frida Keuper, Carolina Olid, Ellen Dorrepaal
Software Mentions: 7
Published: over 6 years ago
10.1111/mec.15160
Impacts of long‐term elevated atmospheric CO<sub>2</sub> concentrations on communities of arbuscular mycorrhizal fungi
Cited by: 19
Author(s): Irena Maček, Dave R. Clark, Nataša Šibanc, Gerald M. Moser, Dominik Vodnik, Christoph Müller, Alex J. Dumbrell
Software Mentions: 7
Published: about 5 years ago
10.1128/mBio.00258-20
Critical Relevance of Stochastic Effects on Low-Bacterial-Biomass 16S rRNA Gene Analysis
Cited by: 27
Author(s): John R. Erb-Downward, Nicole R. Falkowski, Jennifer D’Souza, Lisa McCloskey, Roderick A. McDonald, Christopher Brown, Kerby Shedden, Robert P. Dickson, Christine M. Freeman, Kathleen A. Stringer, Betsy Foxman, Gary B. Huffnagle, Jeffrey L. Curtis, Sara D. Adar
Software Mentions: 7
Published: about 4 years ago
10.1371/journal.pone.0220155
Functional shifts in bird communities from semi-natural oak forests to conifer plantations are not consistent across Europe
Cited by: 9
Author(s): Scott M. Pedley, Luc Barbaro, João L. Guilherme, Sandra Irwin, John O’Halloran, Vânia Proença, Martin J. P. Sullivan
Software Mentions: 7
Published: about 5 years ago
10.3389/fmicb.2016.01367
Spatial and Temporal Dynamics of Pacific Oyster Hemolymph Microbiota across Multiple Scales
Cited by: 65
Author(s): Ana Lokmer, M. Anouk Goedknegt, David W. Thieltges, Dario Fiorentino, Sven Kuenzel, John F. Baines, K. Mathias Wegner
Software Mentions: 7
Published: about 8 years ago
10.3389/fmicb.2020.572931
Hydrocarbon-Degrading Bacteria Alcanivorax and Marinobacter Associated With Microalgae Pavlova lutheri and Nannochloropsis oculata
Cited by: 30
Author(s): Tatyana Chernikova, Rafael Bargiela, Stepan V. Toshchakov, Vignesh Shivaraman, Evgenii A. Lunev, Michail M. Yakimov, David N. Thomas, Peter N. Golyshin
Software Mentions: 7
Published: almost 4 years ago
10.1038/s41598-019-54039-8
High-starch diets alter equine faecal microbiota and increase behavioural reactivity
Cited by: 27
Author(s): L. Bulmer, Jo Anne Murray, Neil M. Burns, A. Garber, Françoise Wemelsfelder, Neil McEwan, P.M. Hastie
Software Mentions: 7
Published: almost 5 years ago
10.1111/1755-0998.13060
Advancing the integration of multi‐marker metabarcoding data in dietary analysis of trophic generalists
Cited by: 60
Author(s): Luís P. da Silva, Vanessa A. Mata, Pedro Lopes, Paulo Pereira, Simon Jarman, Ricardo Lopes, Pedro Beja
Software Mentions: 6
Published: about 5 years ago
10.1002/ece3.5121
Bats in a changing landscape: Linking occupancy and traits of a diverse montane bat community to fire regime
Cited by: 29
Author(s): Rachel V. Blakey, Elisabeth B. Webb, Dylan C. Kesler, Rodney B. Siegel, Derek Corcoran, Matthew Johnson
Software Mentions: 6
Published: over 5 years ago
10.1186/s12915-021-01088-z
Mangroves are an overlooked hotspot of insect diversity despite low plant diversity
Cited by: 17
Author(s): Darren C. J. Yeo, Amrita Srivathsan, Jayanthi Puniamoorthy, Maosheng Foo, Patrick Grootaert, Lena Chan, Benoit Guénard, Claas Damken, Rodzay Abdul Wahab, Ang Y, Rudolf Meier
Software Mentions: 6
Published: about 3 years ago
10.1371/journal.pone.0158117
Food for Pollinators: Quantifying the Nectar and Pollen Resources of Urban Flower Meadows
Cited by: 208
Author(s): D. M. Hicks, Pierre Ouvrard, Katherine C. R. Baldock, Mathilde Baude, Mark A. Goddard, William E. Kunin, Nadine Mitschunas, Jane Memmott, Helen Morse, Maria Nikolitsi, Lynne M. Osgathorpe, Simon G. Potts, Kirsty M. Robertson, Anna Scott, Frazer Sinclair, Duncan B. Westbury, Graham N. Stone
Software Mentions: 6
Published: about 8 years ago
10.1016/j.agee.2018.10.008
Moth responses to sympathetic hedgerow management in temperate farmland
Cited by: 16
Author(s): Jérémy S.P. Froidevaux, Moth Broyles, Gareth Jones
Software Mentions: 5
Published: over 5 years ago
10.1186/s12866-020-02076-z
Highly abundant core taxa in the blow within and across captive bottlenose dolphins provide evidence for a temporally stable airway microbiota
Cited by: 5
Author(s): Catharina Vendl, Tiffanie M. Nelson, Belinda C. Ferrari, Torsten Thomas, Tracey L. Rogers
Software Mentions: 5
Published: over 3 years ago
10.1186/s13068-016-0652-5
Presence does not imply activity: DNA and RNA patterns differ in response to salt perturbation in anaerobic digestion
Cited by: 56
Author(s): Jo De Vrieze, Leticia Regueiro, Ruben Props, Ramiro Vílchez-Vargas, Ruy Jáuregui, Dietmar H. Pieper, Juan M. Lema, Marta Carballa
Software Mentions: 5
Published: almost 8 years ago
10.1186/s40168-016-0189-7
Cardiorespiratory fitness as a predictor of intestinal microbial diversity and distinct metagenomic functions
Cited by: 274
Author(s): Mehrbod Estaki, Jason Pither, Peter Baumeister, Jonathan P. Little, S K Gill, Sanjoy Ghosh, Ahmadi-Vand Zahra, Katelyn Marsden, Deanna L. Gibson
Software Mentions: 5
Published: about 8 years ago
10.1186/s40168-020-00919-5
Viral ecogenomics across the Porifera
Cited by: 19
Author(s): Cecília Pascelli, Patrick W. Laffy, Emmanuelle S. Botté, Marija Kuprešanin, Thomas Rattei, Miguel Lurgi, Timothy Ravasi, Nicole S. Webster
Software Mentions: 5
Published: almost 4 years ago
10.7717/peerj.11012
Changes in diversity and community assembly of jumping spiders (Araneae: Salticidae) after rainforest conversion to rubber and oil palm plantations
Cited by: 13
Author(s): André Junggebauer, Tamara R. Hartke, Daniel Ramos, Ina Schaefer, Damayanti Buchori, Purnama Hidayat, Stefan Scheu, Jochen Drescher
Software Mentions: 5
Published: over 3 years ago
10.7717/peerj.9777
Generalized Linear Models outperform commonly used canonical analysis in estimating spatial structure of presence/absence data
Cited by: 4
Author(s): Lélis Antonio Carlos-Júnior, Joel Christopher Creed, Rob H. Marrs, Rob J. Lewis, Timothy P. Moulton, Rafael Feijó‐Lima, Matthew Spencer
Software Mentions: 5
Published: about 4 years ago
10.1371/journal.pone.0208272
Quality and quantity of leaf litter: Both are important for feeding preferences and growth of an aquatic shredder
Cited by: 16
Author(s): Rebeca Arias-Real, M. Menéndez, Meritxell Abril, Francesc Oliva, Isabel Muñoz
Software Mentions: 5
Published: almost 6 years ago
10.1371/journal.pone.0228157
Changes in oak (Quercus robur) photosynthesis after winter moth (Operophtera brumata) herbivory are not explained by changes in chemical or structural leaf traits
Cited by: 4
Author(s): Kristiina Visakorpi, Terhi Riutta, Yadvinder Malhi, Juha‐Pekka Salminen, Norma Salinas, Sofia Gripenberg
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pone.0118896
Wood-Inhabiting Beetles in Low Stumps, High Stumps and Logs on Boreal Clear-Cuts: Implications for Dead Wood Management
Cited by: 21
Author(s): Jon Andersson, Joakim Hjältén, Mats Dynesius
Software Mentions: 5
Published: over 9 years ago
10.1002/ece3.4500
A metabarcoding approach for the feeding habits of European hake in the Adriatic Sea
Cited by: 17
Author(s): Giulia Riccioni, Marco Stagioni, Corrado Piccinetti, Simone Libralato
Software Mentions: 5
Published: almost 6 years ago
10.3389/fmicb.2021.617280
Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments
Cited by: 9
Author(s): Annika Schnakenberg, David A. Aromokeye, Ajinkya Kulkarni, Lisa Maier, Lea C Wunder, Tim Richter-Heitmann, Thomas Pape, Petra Pop Ristova, Solveig I Bühring, Ingrid Dohrmann, Gerhard Bohrmann, Sabine Kasten, Michael W. Friedrich
Software Mentions: 5
Published: over 3 years ago
10.3389/fpls.2019.00214
Root-Associated Fungal Communities From Two Phenologically Contrasting Silver Fir (Abies alba Mill.) Groups of Trees
Cited by: 18
Author(s): Tina Unuk, Tijana Martinović, Domen Finžgar, Nataša Šibanc, Tine Grebenc, Hojka Kraigher
Software Mentions: 5
Published: over 5 years ago
10.3390/insects11010025
Taxonomic and Functional Response of Millipedes (Diplopoda) to Urban Soil Disturbance in a Metropolitan Area
Cited by: 12
Author(s): Zsolt Tóth, Elisabeth Hornung
Software Mentions: 5
Published: over 4 years ago
10.1038/s41598-017-11244-7
Methanogens predominate in natural corrosion protective layers on metal sheet piles
Cited by: 34
Author(s): Nardy Kip, Stefan Jansen, Márcio Fernandes Alves Leite, Mattias de Hollander, M. Afanasyev, Eiko E. Kuramae, Johannes A. van Veen
Software Mentions: 5
Published: almost 7 years ago
10.1128/mBio.02287-16
Bacterial Topography of the Healthy Human Lower Respiratory Tract
Cited by: 306
Author(s): Robert P. Dickson, John R. Erb-Downward, Christine M. Freeman, Lisa McCloskey, Nicole R. Falkowski, Gary B. Huffnagle, Jeffrey L. Curtis
Software Mentions: 5
Published: over 7 years ago
10.1128/mSystems.00515-20
Physical Activity Shapes the Intestinal Microbiome and Immunity of Healthy Mice but Has No Protective Effects against Colitis in MUC2 <sup>−/−</sup> Mice
Cited by: 12
Author(s): Mehrbod Estaki, Douglas W. Morck, Sanjoy Ghosh, Candice Quin, Jason Pither, Jacqueline A. Barnett, S K Gill
Software Mentions: 5
Published: almost 4 years ago
10.3390/md17110601
Fungal Diversity in Intertidal Mudflats and Abandoned Solar Salterns as a Source for Biological Resources
Cited by: 18
Author(s): Young Mok Heo, Hanbyul Lee, Kyeongwon Kim, Sun Lul Kwon, Min Young Park, Ji Eun Kang, Gyu Hyeok Kim, Beom Seok Kim, Jae Jin Kim
Software Mentions: 4
Published: almost 5 years ago
10.1186/s13002-020-00398-w
Invisible contaminants and food security in former coal mining areas of Santa Catarina, Southern Brazil
Cited by: 4
Author(s): Graziela Dias Blanco, Rafael Barbizan Sühs, Escarlet Brizola, Patrícia Figueiredo Corrêa, Mari Lúcia Campos, Natália Hanazaki
Software Mentions: 4
Published: about 4 years ago
10.1038/s41598-020-80077-8
Repeated surveying over 6 years reveals that fine-scale habitat variables are key to tropical mountain ant assemblage composition and functional diversity
Cited by: 3
Author(s): Mulalo M. Muluvhahothe, Grant S. Joseph, Colleen L. Seymour, Thinandavha C. Munyai, Stefan H. Foord
Software Mentions: 4
Published: over 3 years ago
10.1098/rsos.171428
Grazer responses to variable macroalgal resource conditions facilitate habitat structuring
Cited by: 13
Author(s): Gavin M. Rishworth, Renzo Perissinotto, Matthew S. Bird, Noémie Pelletier
Software Mentions: 4
Published: over 6 years ago
10.1002/ece3.6687
High‐resolution multi‐marker DNA metabarcoding reveals sexual dietary differentiation in a bird with minor dimorphism
Cited by: 17
Author(s): Luís P. da Silva, Vanessa A. Mata, Pedro Lopes, Ricardo Lopes, Pedro Beja
Software Mentions: 4
Published: about 4 years ago
10.1007/s00442-018-4273-5
Landscape-level bird loss increases the prevalence of honeydew-producing insects and non-native ants
Cited by: 7
Author(s): Micah G. Freedman, Ross H. Miller, Haldre S. Rogers
Software Mentions: 4
Published: almost 6 years ago
10.1038/s41598-020-69602-x
Respiratory microbiota of humpback whales may be reduced in diversity and richness the longer they fast
Cited by: 6
Author(s): Catharina Vendl, Eve Slavich, Bernd Wemheuer, Tiffanie M. Nelson, Belinda C. Ferrari, Torsten Thomas, Tracey L. Rogers
Software Mentions: 4
Published: about 4 years ago
10.1111/ele.13251
A 7000‐year history of changing plant trait composition in an Amazonian landscape; the role of humans and climate
Cited by: 28
Author(s): Masha T. van der Sande, William D. Gosling, Alexander Correa‐Metrio, Jamir Prado-Júnior, Lourens Poorter, Rafael S. Oliveira, Lucas Mazzei, Mark B. Bush
Software Mentions: 4
Published: over 5 years ago
10.1371/journal.pone.0067720
Factors Determining Forest Diversity and Biomass on a Tropical Volcano, Mt. Rinjani, Lombok, Indonesia
Cited by: 26
Author(s): Gbadamassi G.O. Dossa, Ekananda Paudel, Junichi Fujinuma, Haiying Yu, Wanlop Chutipong, Zuoqiang Yuan, Sherryl L. Paz, Rhett D. Harrison
Software Mentions: 4
Published: about 11 years ago
10.3389/fmicb.2020.01869
Comparative Genomics of Microbacterium Species to Reveal Diversity, Potential for Secondary Metabolites and Heavy Metal Resistance
Cited by: 20
Author(s): Erika Corretto, Livio Antonielli, Angela Sessitsch, Christoph Höfer, Markus Puschenreiter, Siegrid Widhalm, Karivaradharajan Swarnalakshmi, Günter Brader
Software Mentions: 4
Published: about 4 years ago
10.3389/fmicb.2019.00979
Wood Decay Characteristics and Interspecific Interactions Control Bacterial Community Succession in Populus grandidentata (Bigtooth Aspen)
Cited by: 6
Author(s): Eiko E. Kuramae, Márcio Fernandes Alves Leite, Afnan Khalil Ahmad Suleiman, Christopher M. Gough, Buck T. Castillo, Lewis Faller, Rima B. Franklin, John Syring
Software Mentions: 4
Published: over 5 years ago
10.1038/s42003-021-01820-z
The gut mycobiome of healthy mice is shaped by the environment and correlates with metabolic outcomes in response to diet
Cited by: 50
Author(s): Tahliyah S. Mims, Qusai Al Abdallah, James Monroe Stewart, Sydney Watts, Catrina T. White, Thomas Rousselle, Ankush Gosain, Amandeep Bajwa, Joan C. Han, Kent A. Willis, Joseph F. Pierre
Software Mentions: 4
Published: over 3 years ago
10.3389/fmicb.2018.02926
Effects of Organic Pollutants on Bacterial Communities Under Future Climate Change Scenarios
Cited by: 25
Author(s): Juanjo Rodríguez, Christine Gallampois, Sari Timonen, Agneta Andersson, Hanna Sinkko, Peter Haglund, Åsa M. M. Berglund, Mátyás Ripszám, Daniela Figueroa, Mats Tysklind, Owen Rowe
Software Mentions: 4
Published: almost 6 years ago
10.1038/s42003-020-01562-4
Shifts in honeybee foraging reveal historical changes in floral resources
Cited by: 27
Author(s): Laura Jones, Georgina Brennan, Abigail Lowe, Simon Creer, Col R. Ford, Natasha de Vere
Software Mentions: 4
Published: over 3 years ago
10.3389/fmicb.2018.03356
Unicellular Cyanobacteria Are Important Components of Phytoplankton Communities in Australia’s Northern Oceanic Ecoregions
Cited by: 6
Author(s): Lisa R. Moore, Tianqing Huang, Martin Ostrowski, Sophie Mazard, Sheemal S. Kumar, Hasinika K. A. H. Gamage, Mark V. Brown, Lauren F. Messer, Justin R. Seymour, Ian T. Paulsen
Software Mentions: 4
Published: over 5 years ago
10.1038/s41598-018-36355-7
An adaptive microbiome α-diversity-based association analysis method
Cited by: 27
Author(s): Hyunwook Koh
Software Mentions: 4
Published: over 5 years ago
10.3389/fpls.2021.682142
Shifts in the Abundances of Saprotrophic and Ectomycorrhizal Fungi With Altered Leaf Litter Inputs
Cited by: 12
Author(s): Sara Marañón-Jiménez, Dajana Radujković, Erik Verbruggen, Oriol Grau, Matthias Cuntz, Josep Peñuelas, Andreas Richter, Marion Schrumpf, Corinna Rebmann
Software Mentions: 4
Published: about 3 years ago
10.1186/s12898-019-0270-8
Increased songbird nest depredation due to Aleppo pine (Pinus halepensis) encroachment in Mediterranean shrubland
Cited by: 5
Author(s): Asaf Ben-David, Hila Shamon, Ido Izhaki, Ronny Efronny, Roi Maor, Tamar Dayan
Software Mentions: 4
Published: almost 5 years ago
10.1038/s41598-018-26423-3
Probiotic supplementation and associated infant gut microbiome and health: a cautionary retrospective clinical comparison
Cited by: 68
Author(s): Candice Quin, Mehrbod Estaki, Deanna M. Vollman, Jacqueline A. Barnett, S K Gill
Software Mentions: 4
Published: over 6 years ago
10.3389/fmicb.2015.00146
A comprehensive analysis of the microbial communities of healthy and diseased marine macroalgae and the detection of known and potential bacterial pathogens
Cited by: 60
Author(s): Enrique Zozaya‐Valdés, Suhelen Egan, Torsten Thomas
Software Mentions: 3
Published: over 9 years ago
10.7717/peerj.10809
Temperate southern Australian coastal waters are characterised by surprisingly high rates of nitrogen fixation and diversity of diazotrophs
Cited by: 11
Author(s): Lauren F. Messer, Mark V. Brown, Paul D. van Ruth, Mark Doubell, Justin R. Seymour
Software Mentions: 3
Published: over 3 years ago
10.1002/ece3.3687
Proper experimental design requires randomization/balancing of molecular ecology experiments
Cited by: 18
Author(s): Miklós Bálint, Orsolya Márton, Marlene Schatz, Rolf Alexander Düring, Hans‐Peter Grossart
Software Mentions: 3
Published: over 6 years ago
10.7717/peerj.3532
Fungi associated with mesophotic macroalgae from the ‘Au‘au Channel, west Maui are differentiated by host and overlap terrestrial communities
Cited by: 23
Author(s): Benjamin J. Wainwright, Geoffrey Zahn, Heather L. Spalding, Alison R. Sherwood, Celia M. Smith, Anthony S. Amend
Software Mentions: 3
Published: about 7 years ago
10.3389/fmicb.2015.00017
Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor
Cited by: 23
Author(s): Tan Thi Nguyen, Bjarne Landfald
Software Mentions: 3
Published: over 9 years ago
10.3390/microorganisms8081145
Fungal Community in Antarctic Soil Along the Retreating Collins Glacier (Fildes Peninsula, King George Island)
Cited by: 10
Author(s): Juliana Aparecida dos Santos, Edenilson Meyer, Lara Durães Sette
Software Mentions: 3
Published: about 4 years ago
10.1186/s13071-021-04999-6
Australian mosquito assemblages vary between ground and sub-canopy habitats
Cited by: 1
Author(s): Boni F. Sebayang, Tanya L. Russell, Kyran M. Staunton, Michael Townsend, Christopher J. Paton, Tovi Lehmann, Thomas R. Burkot
Software Mentions: 3
Published: almost 3 years ago
10.1371/journal.pone.0244580
Impacts of an Amazonian hydroelectric dam on frog assemblages
Cited by: 9
Author(s): Jussara Santos Dayrell, William E. Magnusson, Paulo Estefano Dineli Bobrowiec, Albertina P. Lima
Software Mentions: 3
Published: over 3 years ago
10.1002/ece3.4170
The bacterial community structure and functional profile in the heavy metal contaminated paddy soils, surrounding a nonferrous smelter in South Korea
Cited by: 73
Author(s): Sherlyn Tipayno, Jaak Truu, Sandipan Samaddar, Marika Truu, Jens‐Konrad Preem, Kristjan Oopkaup, Mikk Espenberg, Poulami Chatterjee, Young Kee Kang, Kiyoon Kim, Tongmin Sa
Software Mentions: 3
Published: over 6 years ago
10.1038/s41598-019-48784-z
Cholestasis induced by bile duct ligation promotes changes in the intestinal microbiome in mice
Cited by: 29
Author(s): Raúl Cabrera‐Rubio, Angela Patterson, Paul D. Cotter, Naiara Beraza
Software Mentions: 3
Published: about 5 years ago
10.1038/s41396-020-00801-0
Relationships between nitrogen cycling microbial community abundance and composition reveal the indirect effect of soil pH on oak decline
Cited by: 47
Author(s): Kelly Scarlett, Sandra Denman, Dave R. Clark, Jack Forster, Elena Vanguelova, Nigel L. Brown, Corinne Whitby
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pone.0122210
Structure of the Epiphyte Community in a Tropical Montane Forest in SW China
Cited by: 30
Author(s): Mengli Zhao, Nalaka Geekiyanage, Jianchu Xu, Myo Myo Khin, Dian Ridwan Nurdiana, Ekananda Paudel, Rhett D. Harrison
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0111786
Fungicide Effects on Fungal Community Composition in the Wheat Phyllosphere
Cited by: 136
Author(s): Ida Karlsson, Hanna Friberg, Christian Steinberg, Paula Persson
Software Mentions: 3
Published: almost 10 years ago
10.1371/journal.pone.0053987
Host Genotype Shapes the Foliar Fungal Microbiome of Balsam Poplar (Populus balsamifera)
Cited by: 172
Author(s): Miklós Bálint, Peter Tiffin, Björn M. Hallström, Robert B. O’Hara, Matthew S. Olson, Johnathon D. Fankhauser, Meike Piepenbring, Imke Schmitt
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0131327
Influence of Seasonal Food Availability on the Dynamics of Seabird Feeding Flocks at a Coastal Upwelling Area
Cited by: 4
Author(s): C. Anguita, Alejandro Simeone
Software Mentions: 2
Published: about 9 years ago
10.1002/ece3.3899
What determines prey selection in owls? Roles of prey traits, prey class, environmental variables, and taxonomic specialization
Cited by: 19
Author(s): Orr Comay, Tamar Dayan
Software Mentions: 2
Published: over 6 years ago
10.1002/ece3.6059
Should ecologists prefer model‐ over distance‐based multivariate methods?
Cited by: 18
Author(s): Jonathan F. Jupke, Ralf B. Schäfer
Software Mentions: 2
Published: over 4 years ago
10.1002/ece3.2389
Land-use change promotes avian diversity at the expense of species with unique traits
Cited by: 33
Author(s): Bernard W. T. Coetzee, Steven Loudon Chown
Software Mentions: 2
Published: almost 8 years ago
10.7717/peerj.9088
Effect of predation risk and ectoparasitic louse flies on physiological stress condition of the red-tailed tropicbird (Phaethon rubricauda) from Rapa Nui and Salas & Gómez islands
Cited by: 1
Author(s): Nicolás Luna, Andrea I. Varela, Guillermo Luna‐Jorquera, Katherina Brokordt
Software Mentions: 2
Published: about 4 years ago
10.3389/fbioe.2017.00008
A Clostridium Group IV Species Dominates and Suppresses a Mixed Culture Fermentation by Tolerance to Medium Chain Fatty Acids Products
Cited by: 63
Author(s): Stephen Andersen, Vicky De Groof, Way Cern Khor, Hugo Roume, Ruben Props, Marta Coma, Korneel Rabaey
Software Mentions: 2
Published: over 7 years ago
10.1093/jisesa/ieab071
Influence of European Beech (Fagales: Fagaceae) Rot Hole Habitat Characteristics on Invertebrate Community Structure and Diversity
Cited by: 2
Author(s): Jordan P. Cuff, Fredric M. Windsor, Emma C. Gilmartin, Lynne Boddy, T. Hefin Jones
Software Mentions: 2
Published: about 3 years ago
10.3389/fmicb.2021.631445
Assessing the Diversity and Biomedical Potential of Microbes Associated With the Neptune’s Cup Sponge, Cliona patera
Cited by: 2
Author(s): Xin Yi Ho, Nursheena Parveen Katermeran, Lindsey K. Deignan, Ma Yadanar Phyo, Ji Fa Marshall Ong, Jun Xian Goh, Juat Ying Ng, Karenne Tun, Lik Tong Tan
Software Mentions: 2
Published: about 3 years ago
10.3389/fmicb.2020.563118
Bacterial Communities Show Algal Host (Fucus spp.)/Zone Differentiation Across the Stress Gradient of the Intertidal Zone
Cited by: 15
Author(s): Charlotte T.C. Quigley, Kyle Capistrant‐Fossa, Hilary G. Morrison, Ladd E. Johnson, Aleksey Morozov, Vicki Hertzberg, Susan H. Brawley
Software Mentions: 2
Published: almost 4 years ago
10.7717/peerj.7493
The effect of mangrove restoration on avian assemblages of a coastal lagoon in southern Mexico
Cited by: 9
Author(s): Julio Canales-Delgadillo, Rosela Pérez-Ceballos, Arturo Zaldívar-Jiménez, Martín Merino–Ibarra, Gabriela Cardoza, J.G. Cardoso-Mohedano
Software Mentions: 2
Published: about 5 years ago
10.3389/fmicb.2021.633535
Do Aerial Nitrogen Depositions Affect Fungal and Bacterial Communities of Oak Leaves?
Cited by: 0
Author(s): Luigimaria Borruso, Aïda Bani, Silvia Pioli, Maurizio Ventura, Pietro Panzacchi, Livio Antonielli, Francesco Giammarchi, Andrea Polo, Giustino Tonon, Lorenzo Brusetti
Software Mentions: 2
Published: over 3 years ago
10.7717/peerj.2224
Meter scale variation in shrub dominance and soil moisture structure Arctic arthropod communities
Cited by: 34
Author(s): Rikke Reisner Hansen, Ole Ingemann Hansen, Joseph J. Bowden, Urs A. Treier, Signe Normand, Toke T. Høye
Software Mentions: 2
Published: about 8 years ago
10.1098/rsos.190913
Extensive sampling reveals the phenology and habitat use of Afrotropical parasitoid wasps (Hymenoptera: Ichneumonidae: Rhyssinae)
Cited by: 4
Author(s): Tapani Hopkins, Heikki Roininen, Ilari E. Sääksjärvi
Software Mentions: 2
Published: about 5 years ago
10.1038/srep45315
Specialist nectar-yeasts decline with urbanization in Berlin
Cited by: 12
Author(s): Jeannine Wehner, Moritz Mittelbach, Matthias C. Rillig, Erik Verbruggen
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-08873-3
Macroalgal browsing on a heavily degraded, urbanized equatorial reef system
Cited by: 26
Author(s): Andrew G. Bauman, Andrew S. Hoey, Glenn Dunshea, David A. Feary, Jeffrey Low, Peter A. Todd
Software Mentions: 2
Published: about 7 years ago
10.1038/s41598-018-24388-x
Gelatinous plankton is important in the diet of European eel (Anguilla anguilla) larvae in the Sargasso Sea
Cited by: 39
Author(s): Daniel Jiro Ayala, Peter Munk, Regitze B. C. Lundgreen, Sachia J. Traving, Cornelia Jaspers, Tue Sparholt Jørgensen, Lars Hestbjerg Hansen, Lasse Riemann
Software Mentions: 2
Published: over 6 years ago
10.3897/zookeys.801.22829
The role of urban forest patches in maintaining isopod diversity (Oniscidea)
Cited by: 4
Author(s): Elisabeth Hornung, Andrea Kásler, Zsolt Tóth
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-020-60024-3
Bioactive carbon improves nitrogen fertiliser efficiency and ecological sustainability
Cited by: 8
Author(s): P. R. Espie, Haley Ridgway
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-78604-8
Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia
Cited by: 8
Author(s): Elena S. Gusareva, Nicolas Paul Eugène Gaultier, Balakrishnan N. V. Premkrishnan, Carmon Kee, Seng Koon Lim, Cassie E. Heinle, Rikky W. Purbojati, Ang Poh Nee, Sachin R. Lohar, Yanqing Koh, V. N. Kharkov, Daniela I. Drautz–Moses, Vadim Stepanov, Stephan C. Schuster
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0206805
Interaction of land management and araucaria trees in the maintenance of landscape diversity in the highlands of southern Brazil
Cited by: 11
Author(s): Rafael Barbizan Sühs, Eduardo Luís Hettwer Giehl, Nivaldo Peroni
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0244783
A decrease in taxonomic and functional diversity of dung beetles impacts the ecosystem function of manure removal in altered subtropical habitats
Cited by: 7
Author(s): Rodrigo Sarmiento-Garcés, Malva Isabel Medina Hernández
Software Mentions: 2
Published: over 3 years ago
10.14814/phy2.14693
Biological subphenotypes of acute respiratory distress syndrome may not reflect differences in alveolar inflammation
Cited by: 15
Author(s): Nanon F.L. Heijnen, Laura A. Hagens, Marry R. Smit, Marcus J. Schultz, Tom van der Poll, Ronny M. Schnabel, Iwan C. C. van der Horst, Robert P. Dickson, Dennis C. J. J. Bergmans, Lieuwe D. J. Bos
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0117920
Yet Another Empty Forest: Considering the Conservation Value of a Recently Established Tropical Nature Reserve
Cited by: 26
Author(s): Rachakonda Sreekar, Kai Zhang, Jianchu Xu, Rhett D. Harrison
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0187675
The tick biocontrol agent Metarhizium brunneum (= M. anisopliae) (strain F52) does not reduce non-target arthropods
Cited by: 27
Author(s): Ilya R. Fischhoff, Felicia Keesing, Richard S. Ostfeld
Software Mentions: 1
Published: almost 7 years ago
10.7717/peerj.6307
Dietary analysis of an uncharacteristic population of the Mountain Pygmy-possum<i>(Burramys parvus)</i>in the Kosciuszko National Park, New South Wales, Australia
Cited by: 5
Author(s): Tahneal Hawke, Hayley Bates, Suzanne J. Hand, Michael Archer, Linda Broome
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0085987
Potential Impacts of Climate Change on Insect Communities: A Transplant Experiment
Cited by: 54
Author(s): Sabine S. Nooten, Nigel R. Andrew, Lesley Hughes
Software Mentions: 1
Published: over 10 years ago