Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: msap

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/msap

Statistical analysis for Methylation-sensitive Amplification Polymorphism data
8 versions
Latest release: over 10 years ago
0 downloads

Papers Mentioning msap 22

Small ocean temperature increases elicit stage-dependent changes in DNA methylation and gene expression in a fish, the European sea bass
Cited by: 73
Author(s): Dafni Anastasiadi, Noèlia Díaz, Francesc Piferrer
Software Mentions: 4
Published: about 7 years ago

10.3389/fpls.2018.01677

Transgenerational Effects and Epigenetic Memory in the Clonal Plant Trifolium repens
Cited by: 66
Author(s): Alejandra Pilar Rendina González, Veronica Preite, Koen Verhoeven, Vít Latzel
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0208591

Transgenerational effects in asexually reproduced offspring of Populus
Cited by: 11
Author(s): Sumitra Dewan, Pieter De Frenne, An Vanden Broeck, Marijke Steenackers, Kristine Vander Mijnsbrugge, Kris Verheyen
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0070730

Epigenetic Differentiation Persists after Male Gametogenesis in Natural Populations of the Perennial Herb Helleborus foetidus (Ranunculaceae)
Cited by: 32
Author(s): Carlos M. Herrera, Mónica Medrano, Pilar Bazaga
Software Mentions: 3
Published: about 11 years ago

10.1371/journal.pone.0235073

The assessment of epigenetic diversity, differentiation, and structure in the ‘Fuji’ mutation line implicates roles of epigenetic modification in the occurrence of different mutant groups as well as spontaneous mutants
Cited by: 9
Author(s): Xuezhu Du, Han Li, Minxiao Liu, Xueqing Liu, Zhongwu Jiang, Lingling Zhao, Yin Tang, Yanxia Sun, Xueyong Zhang, Daliang Liu, Lingyun Song
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0208214

Common garden experiment reveals altered nutritional values and DNA methylation profiles in micropropagated three elite Ghanaian sweet potato genotypes
Cited by: 5
Author(s): Belinda Akomeah, Marian D. Quain, Sunita A. Ramesh, Lakshay Anand, Carlos M. Rodríguez López
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0151863

DNA Methylation and Potential for Epigenetic Regulation in Pygospio elegans
Cited by: 9
Author(s): Jenni Kesäniemi, Liisa Heikkinen, K. Emily Knott
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0166646

Herbivore-Induced DNA Demethylation Changes Floral Signalling and Attractiveness to Pollinators in Brassica rapa
Cited by: 30
Author(s): Roman T. Kellenberger, Philipp M. Schlüter, Florian P. Schiestl
Software Mentions: 2
Published: almost 8 years ago

10.3389/fphys.2014.00062

The role of DNA methylation on Octopus vulgaris development and their perspectives
Cited by: 27
Author(s): Eva Díaz-Freije, Camino Gestal, Sheila Castellanos-Martínez, Paloma Morán
Software Mentions: 1
Published: almost 11 years ago

10.1038/s41437-021-00415-y

Epigenetic responses of hare barley (Hordeum murinum subsp. leporinum) to climate change: an experimental, trait-based approach
Cited by: 11
Author(s): Víctor Chano, Tania Domínguez-Flores, Maria Dolores Hidalgo-Galvez, Jesús Rodríguez‐Calcerrada, Ignacio Manuel Pérez-Ramos
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-019-49813-7

Epigenetic patterns associated with an ascidian invasion: a comparison of closely related clades in their native and introduced ranges
Cited by: 13
Author(s): Nicola A. Hawes, Achira Amadoru, Louis A. Tremblay, Xavier Pochon, Brendon Dunphy, Andrew E. Fidler, Kirsty F. Smith
Software Mentions: 1
Published: about 5 years ago

10.1007/s00122-020-03620-1

Heritable epigenetic diversity for conservation and utilization of epigenetic germplasm resources of clonal East African Highland banana (EAHB) accessions
Cited by: 10
Author(s): Mercy Kitavi, Ronan Cashell, Morag Ferguson, J. Lorenzen, Moses Nyine, Peter C. McKeown, Charles Spillane
Software Mentions: 1
Published: about 4 years ago

10.1093/aobpla/plv146

Epigenetics of drought-induced trans-generational plasticity: consequences for range limit development
Cited by: 15
Author(s): Jacob Alsdurf, Cynthia M. Anderson, David H. Siemens
Software Mentions: 1
Published: about 9 years ago

10.3906/biy-1911-69

MSAP analysis reveals diverse epigenetic statuses in opium poppy varieties with different benzyisoquinoline alkaloid content
Cited by: 3
Author(s): Betül Bulut, Zehra Aydinli, Mine Türktaş-Erken
Software Mentions: 1
Published: over 4 years ago

10.7717/peerj.5003

Effects of temperature and salinity stress on DNA methylation in a highly invasive marine invertebrate, the colonial ascidianDidemnum vexillum
Cited by: 27
Author(s): Nicola A. Hawes, Louis A. Tremblay, Xavier Pochon, Brendon Dunphy, Andrew E. Fidler, Kirsty F. Smith
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.2889

The DNA methylation level against the background of the genome size and t-heterochromatin content in some species of the genusSecale L
Cited by: 9
Author(s): Anna Kalinka, Magdalena Achrem, Paulina Poter
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0216717

Agromorphologic, genetic and methylation profiling of Dioscorea and Musa species multiplied under three micropropagation systems
Cited by: 6
Author(s): Temitope Jekayinoluwa, Badara Guèye, Ranjana Bhattacharjee, Oladele Osibanjo, Trushar Shah, Michael T. Abberton
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0215096

The use of MSAP reveals epigenetic diversity of the invasive clonal populations of Arundo donax L.
Cited by: 41
Author(s): Francesco Guarino, Angela Cicatelli, G. Brundu, Giovanni Improta, Maria Triassi, Stefano Castiglione
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0131480

Epigenetic Diversity of Clonal White Poplar (Populus alba L.) Populations: Could Methylation Support the Success of Vegetative Reproduction Strategy?
Cited by: 46
Author(s): Francesco Guarino, Angela Cicatelli, G. Brundu, Berthold Heinze, Stefano Castiglione
Software Mentions: 1
Published: over 9 years ago

10.1002/ece3.7954

Epigenetic variation associated with responses to different habitats in the context of genetic divergence in Phragmites australis
Cited by: 4
Author(s): Qiuying Tian, Zhiyuan Liu, Yang Yue, Bao Liu
Software Mentions: 1
Published: about 3 years ago

10.1002/ece3.4144

Genetic and epigenetic changes during the invasion of a cosmopolitan species (Phragmites australis)
Cited by: 25
Author(s): Lele Liu, Pei Cuiping, Shuna Liu, Xiao Guo, Ning Du, Weihua Guo
Software Mentions: 1
Published: over 6 years ago