cran: mrbayes | Projects | Ecosyste.ms: Papers

10.1111/1755-0998.13220

High‐contiguity genome assembly of the chemosynthetic gammaproteobacterial endosymbiont of the cold seep tubeworm Lamellibrachia barhami
Cited by: 6
Author(s): Corinna Breusing, Darrin T. Schultz, Sebastian Sudek, Alexandra Z. Worden, Charles W. Young
Software Mentions: 11
Published: over 4 years ago

10.1111/mec.13636

Escape from the cryptic species trap: lichen evolution on both sides of a cyanobacterial acquisition event
Cited by: 34
Author(s): Kevin Schneider, Philipp Resl, Toby Spribille
Software Mentions: 11
Published: over 8 years ago

10.1038/s41598-019-42310-x

Mitogenomics of historical type specimens of Australasian turtles: clarification of taxonomic confusion and old mitochondrial introgression
Cited by: 19
Author(s): Christian Kehlmaier, Xiuwen Zhang, Arthur Georges, Patrick D. Campbell, Scott Thomson, Uwe Fritz
Software Mentions: 9
Published: over 5 years ago

10.1038/s41598-019-40949-0

Extensive conservation of the proneuropeptide and peptide prohormone complement in mollusks
Cited by: 17
Author(s): André Luiz de Oliveira, Andrew Calcino, Andreas Wanninger
Software Mentions: 8
Published: almost 6 years ago

10.1371/journal.pone.0231744

Combining genetic and demographic monitoring better informs conservation of an endangered urban snake
Cited by: 11
Author(s): Dustin A. Wood, Jonathan P. Rose, Brian J. Halstead, Ricka E. Stoelting, Karen E. Swaim, Amy G. Vandergast
Software Mentions: 8
Published: over 4 years ago

10.1038/s41598-017-02157-6

Molecular phylogenetics and biogeography of the mint tribe Elsholtzieae (Nepetoideae, Lamiaceae), with an emphasis on its diversification in East Asia
Cited by: 22
Author(s): Pan Li, Zhe-Chen Qi, Luxian Liu, Tetsuo Ohi‐Toma, Dong Kun Lee, Tsung‐Hsin Hsieh, Chengxin Fu, Kenneth M. Cameron, Ying‐Xiong Qiu
Software Mentions: 7
Published: over 7 years ago

10.1371/journal.pone.0153108

Integrative Taxonomy of Southeast Asian Snail-Eating Turtles (Geoemydidae: Malayemys) Reveals a New Species and Mitochondrial Introgression
Cited by: 22
Author(s): Flora Ihlow, Melita Vamberger, Morris Flecks, Timo Hartmann, Michael Cota, Sunchai Makchai, Pratheep Meewattana, J. E. Dawson, Long Kheng, Dennis Rödder, Uwe Fritz
Software Mentions: 7
Published: over 8 years ago

10.1111/ddi.12638

Dimensions of biodiversity loss: Spatial mismatch in land‐use impacts on species, functional and phylogenetic diversity of European bees
Cited by: 41
Author(s): Adriana De Palma, Michael Kuhlmann, Rob Bugter, Simon Ferrier, Andrew J. Hoskins, Simon G. Potts, Stuart P. M. Roberts, Oliver Schweiger, Andy Purvis
Software Mentions: 7
Published: over 7 years ago

10.1002/ece3.5406

Quaternary climate change and habitat preference shaped the genetic differentiation and phylogeography ofRhodiolasect.Prainiain the southern Qinghai–Tibetan Plateau
Cited by: 8
Author(s): Zi‐Meng Wang, Shi‐Yong Meng, Guang‐Yuan Rao
Software Mentions: 7
Published: over 5 years ago

10.1111/1755-0998.13205

A new method of metabarcoding Microsporidia and their hosts reveals high levels of microsporidian infections in mosquitoes (Culicidae)
Cited by: 25
Author(s): Artur Trzebny, Anna Słodkowicz-Kowalska, James J. Becnel, Neil D. Sanscrainte, Mirosława Dabert
Software Mentions: 6
Published: over 4 years ago

10.1002/ece3.2646

Mountains too high and valleys too deep drive population structuring and demographics in a Qinghai–Tibetan Plateau frog Nanorana pleskei (Dicroglossidae)
Cited by: 16
Author(s): Weiwei Zhou, Jing Jin, Jun Wu, Hong‐Man Chen, Juping Yang, Robert W. Murphy, Jing Che
Software Mentions: 5
Published: about 8 years ago

10.1111/eva.12495

Speciation history of a species complex ofPrimulina eburnea(Gesneriaceae) from limestone karsts of southern China, a biodiversity hot spot
Cited by: 23
Author(s): Jing Wang, Bin Ai, Hanghui Kong, Ming Kang
Software Mentions: 5
Published: over 7 years ago

10.1111/eva.12189

Fine‐scale genetic correlates to condition and migration in a wild cervid
Cited by: 21
Author(s): Joseph M. Northrup, Aaron B. A. Shafer, Charles R. Anderson, David W. Coltman, George Wittemyer
Software Mentions: 5
Published: over 10 years ago

10.1002/ece3.2931

Phylogeography of a widespread small carnivore, the western spotted skunk (Spilogale gracilis) reveals temporally variable signatures of isolation across western North America
Cited by: 11
Author(s): Adam W. Ferguson, Molly M. McDonough, Gema I. Guerra, Margaret Rheude, Jerry W. Dragoo, Loren K. Ammerman, Robert C. Dowler
Software Mentions: 5
Published: over 7 years ago

10.1002/ece3.3175

Biogeography and systematics of endemic island damselflies: The Nesobasis and Melanesobasis (Odonata: Zygoptera) of Fiji
Cited by: 10
Author(s): Christopher D. Beatty, Melissa Sánchez Herrera, Jeffrey H. Skevington, Arash Rashed, Hans Van Gossum, Scott Kelso, Thomas N. Sherratt
Software Mentions: 5
Published: over 7 years ago

10.1002/ece3.3206

Growth form evolution and hybridization in Senecio (Asteraceae) from the high equatorial Andes
Cited by: 19
Author(s): Eva Dušková, Petr Sklenář, Filip Kolář, Diana L. A. Vásquez, Katya Romoleroux, Tomáš Fér, Karol Marhold
Software Mentions: 5
Published: over 7 years ago

10.1111/ppa.13001

Analyses of seven new whole genome sequences of cassava brown streak viruses in Mozambique reveals two distinct clades: evidence for new species
Cited by: 8
Author(s): J. J. G. Amisse, Joseph Ndunguru, Fred Tairo, Elijah Ateka, Laura M. Boykin, Monica A. Kehoe, Nurbibi Cossa, Chrissie Rey, Peter Sseruwagi
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12862-018-1148-7

High polymorphism in MHC-DRB genes in golden snub-nosed monkeys reveals balancing selection in small, isolated populations
Cited by: 16
Author(s): Pei Zhang, Kang Huang, Bingyi Zhang, Derek W. Dunn, Dan Chen, Fan Li, Qi Xin, Songtao Guo, Baoguo Li
Software Mentions: 4
Published: almost 7 years ago

10.1111/mec.14084

Divergence of annual and perennial species in the Brassicaceae and the contribution of cis-acting variation atFLCorthologues
Cited by: 58
Author(s): Christiane Kiefer, Edouard Severing, Robert Karl, Sara Bergonzi, Marcus A. Koch, Achim Tresch, George Coupland
Software Mentions: 4
Published: almost 8 years ago

10.1111/mec.12840

Niche divergence promotes rapid diversification of East African sky island white-eyes (Aves: Zosteropidae)
Cited by: 46
Author(s): Siobhan C. Cox, Robert Prŷs-Jones, Jan Christian Habel, Bernard Amakobe, Julia J. Day
Software Mentions: 4
Published: over 10 years ago

10.1111/mec.13186

Ecological host fitting of <scp>T</scp> rypanosoma cruzi <scp>T</scp> c <scp>I</scp> in <scp>B</scp> olivia: mosaic population structure, hybridization and a role for humans in <scp>A</scp> ndean parasite dispersal
Cited by: 37
Author(s): Louisa A. Messenger, Lineth García, Mathieu Vanhove, Carlos Huaranca, Marinely Bustamante, Mary-Cruz Torrico, Faustino Torrico, Michael A. Miles, Martin S. Llewellyn
Software Mentions: 4
Published: over 9 years ago

10.1002/ece3.4360

RAD sequencing resolved phylogenetic relationships in European shrub willows (SalixL. subg.Chamaetiaand subg.Vetrix) and revealed multiple evolution of dwarf shrubs
Cited by: 31
Author(s): Natascha D. Wagner, S.M. Gramlich, Elvira Hörandl
Software Mentions: 4
Published: over 6 years ago

10.1002/2211-5463.13170

Complete chloroplast genomes of Achnatherum inebrians and comparative analyses with related species from Poaceae
Cited by: 7
Author(s): Xuekai Wei, Xiuzhang Li, Taixiang Chen, Zhenjiang Chen, Yuanyuan Jin, Kamran Malik, Chunjie Li
Software Mentions: 4
Published: over 3 years ago

10.3389/fpubh.2020.00455

Extensive Homoplasy but No Evidence of Convergent Evolution of Repeat Numbers at MIRU Loci in Modern Mycobacterium tuberculosis Lineages
Cited by: 1
Author(s): Alexander C. Outhred, Ulziijargal Gurjav, Peter Jelfs, Nadine McCallum, Qinning Wang, Grant A. Hill-Cawthorne, Ben J. Marais, Vitali Sintchenko
Software Mentions: 4
Published: over 4 years ago

10.1111/imb.12585

Developmental expression and evolution of hexamerin and haemocyanin from Folsomia candida (Collembola)
Cited by: 3
Author(s): Yangyang Liang, Wei Xie, Yigang Luan
Software Mentions: 4
Published: over 5 years ago

10.1111/jbi.13525

Ancestral range reconstruction of remote oceanic island species of Plantago (Plantaginaceae) reveals differing scales and modes of dispersal
Cited by: 20
Author(s): Natalie Iwanycki Ahlstrand, Brecht Verstraete, Gustavo Hassemer, Stephanie Dunbar-Co, Ronald K. Hoggard, Heidi M. Meudt, Nina Rønsted
Software Mentions: 4
Published: almost 6 years ago

10.1111/eva.12455

Hidden diversity and phylogeographic history provide conservation insights for the edible seaweedSargassum fusiformein the Northwest Pacific
Cited by: 30
Author(s): Zi Min Hu, Jing Jing Li, Zhong Min Sun, Xu Gao, Jincao Yao, Han Ho Choi, Hikaru Endo, Deli Duan
Software Mentions: 3
Published: almost 8 years ago

10.1186/1471-2164-13-166

Mitochondrial genome evolution in species belonging to the Phialocephala fortinii s.l. - Acephala applanata species complex
Cited by: 33
Author(s): Angelo Duò, Rémy Bruggmann, Stefan Zoller, Matthias Bernt, Christoph R. Grünig
Software Mentions: 3
Published: over 12 years ago

10.7554/eLife.46113

Ancient origins of arthropod moulting pathway components
Cited by: 22
Author(s): André Luiz de Oliveira, Andrew Calcino, Andreas Wanninger
Software Mentions: 2
Published: over 5 years ago

10.1111/ppa.12834

Characterization of the pathogenicity of strains of Pseudomonas syringae towards cherry and plum
Cited by: 35
Author(s): Michelle T. Hulin, John W. Mansfıeld, P. Brain, Xiuhong Xu, Robert W. Jackson, Richard J. Harrison
Software Mentions: 2
Published: almost 7 years ago

10.1002/ece3.6384

Gene flow and species delimitation in fishes of Western North America: Flannelmouth ( Catostomus latipinnis ) and Bluehead sucker ( C. Pantosteus discobolus )
Cited by: 10
Author(s): Max R. Bangs, Marlis R. Douglas, Tyler K. Chafin
Software Mentions: 2
Published: over 4 years ago

10.1007/s10482-017-0855-1

Two new species of the Fusarium fujikuroi species complex isolated from the natural environment
Cited by: 34
Author(s): Tarek A. A. Moussa, Hassan S. Al-Zahrani, Naif M. S. Kadasa, Sarah Ahmed, G. S. de Hoog, Abdullah M. S. Al‐Hatmi
Software Mentions: 2
Published: almost 8 years ago

10.7150/thno.43251

Aristolochic acid mutational signature defines the low-risk subtype in upper tract urothelial carcinoma
Cited by: 31
Author(s): Huan Lü, Liang Yuan, Bao Guan, Yue Shi, Yanqing Gong, Juan Li, Wenwen Kong, Jin Liu, Dong Fang, Libo Li, Qun He, Muhammad Shakeel, Xuesong Li, Liqun Zhou, Weimin Ci
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0056940

An Invasive Fish and the Time-Lagged Spread of Its Parasite across the Hawaiian Archipelago
Cited by: 32
Author(s): Michelle R. Gaither, Greta S. Aeby, Matthias Vignon, Yu-ichiro Meguro, Mark C. Rigby, Christina M. Runyon, Robert J. Toonen, Chelsea L. Wood, Brian W. Bowen
Software Mentions: 2
Published: almost 12 years ago

10.1111/jbi.13220

Range‐constrained co‐occurrence simulation reveals little niche partitioning among rock‐dwelling Montenegrina land snails (Gastropoda: Clausiliidae)
Cited by: 12
Author(s): Zoltán Fehér, Katharina Mason, Miklós Szekeres, Elisabeth Haring, Sonja Bamberger, Barna Páll‐Gergely, Péter Sólymos
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0020350

Phylogenetic Relationships in Pterodroma Petrels Are Obscured by Recent Secondary Contact and Hybridization
Cited by: 18
Author(s): Ruth Brown, William Chester Jordan, Chris G. Faulkes, Carl G. Jones, Leandro Bugoni, Vikash Tatayah, Ricardo L. Palma, Richard A. Nichols
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0163612

Whole Genome Sequencing Demonstrates Limited Transmission within Identified Mycobacterium tuberculosis Clusters in New South Wales, Australia
Cited by: 40
Author(s): Ulziijargal Gurjav, Alexander C. Outhred, Peter Jelfs, Nadine McCallum, Qinning Wang, Grant A. Hill-Cawthorne, Ben J. Marais, Vitali Sintchenko
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0015747

The Molecular Evolution of the p120-Catenin Subfamily and Its Functional Associations
Cited by: 65
Author(s): Robert H. Carnahan, Antonis Rokas, Eric A. Gaucher, Albert B. Reynolds
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0004287

Compound Evolutionary History of the Rhesus Macaque Mhc Class I B Region Revealed by Microsatellite Analysis and Localization of Retroviral Sequences
Cited by: 9
Author(s): Gaby G. M. Doxiadis, Corrine M. C. Heijmans, Maxime Bonhomme, Nel Otting, Brigitte Crouau‐Roy, Ronald E. Bontrop
Software Mentions: 1
Published: almost 16 years ago

10.1371/journal.pone.0187318

Independent degradation in genes of the plastid ndh gene family in species of the orchid genus Cymbidium (Orchidaceae; Epidendroideae)
Cited by: 25
Author(s): Hyoung Tae Kim, Mark W. Chase
Software Mentions: 1
Published: about 7 years ago

10.1080/23802359.2017.1372705

Revealing the complete mitogenome sequence of Hypsugo alaschanicus based on next generation sequencing
Cited by: 2
Author(s): Yanshuang Shi, Shuai Zhao, Xiaomin Han, Chunzhu Xu
Software Mentions: 1
Published: over 7 years ago

10.1002/ece3.2656

Geographical structure, narrow species ranges, and Cenozoic diversification in a pantropical clade of epiphyllous leafy liverworts
Cited by: 32
Author(s): Julia Bechteler, Alfons Schäfer–Verwimp, Gaik Ee Lee, Kathrin Feldberg, Oscar Alejandro Pérez‐Escobar, Tamás Pócs, Denílson Fernandes Peralta, Matt A. M. Renner, Jochen Heinrichs
Software Mentions: 1
Published: about 8 years ago

10.1007/s00425-012-1754-3

Evolution of GOLDEN2-LIKE gene function in C3 and C4 plants
Cited by: 77
Author(s): Peng Wang, Jim P. Fouracre, Steven Kelly, Shanta Karki, Udo Gowik, Sylvain Aubry, Michael K. Shaw, Peter Westhoff, Inez H. Slamet‐Loedin, W. Paul Quick, Julian M. Hibberd, Jane A. Langdale
Software Mentions: 1
Published: over 12 years ago

10.1002/2211-5463.12914

Comparison of the complete mitochondrial genome of Phyllophorus liuwutiensis (Echinodermata: Holothuroidea: Phyllophoridae) to that of other sea cucumbers
Cited by: 6
Author(s): Falong Yang, Changyong Zhou, Ngoc Tuan Tran, Zaiqiao Sun, Jianshao Wu, Hui Ge, Zhen Lu, Chenhui Zhong, Zhihuang Zhu, Qiuhua Yang, Qiang Lin
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2020.01597

Novel Laccaria Species From Juglandaceae Forest in Panama With Notes on Their Ecology
Cited by: 3
Author(s): Adriana Corrales, Andrew Wilson, Gregory M. Mueller, Clark L. Ovrebo
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-91357-2

Population dynamics in the Japanese Archipelago since the Pleistocene revealed by the complete mitochondrial genome sequences
Cited by: 8
Author(s): Fuzuki Mizuno, Jun Gojobori, Masahiko Kumagai, Hisao Baba, Yasuhiro Taniguchi, Osamu Kondo, Masami Matsushita, Takayuki Matsushita, Fumihiko Matsuda, Koichiro Higasa, Michiko Hayashi, Li Wang, Kunihiko Kurosaki, Shintaroh Ueda
Software Mentions: 1
Published: over 3 years ago

10.3390/genes10070487

The Complete Mitochondrial Genome of Platysternon megacephalum peguense and Molecular Phylogenetic Analysis
Cited by: 10
Author(s): Hongdi Luo, Haijun Li, An Huang, Qingyong Ni, Yongfang Yao, Huailiang Xu, Bo Zeng, Ying Li, Zhimin Wei, Guohua Yang, Mingwang Zhang
Software Mentions: 1
Published: over 5 years ago

10.3897/mycokeys.77.57394

Hebeloma in the Malay Peninsula: Masquerading within Psathyrella
Cited by: 6
Author(s): Ursula Eberhardt, Nicole Schütz, Henry J. Beker, Su See Lee, Egon Horak
Software Mentions: 1
Published: almost 4 years ago

Projects: cran: mrbayes

Papers Mentioning mrbayes 48