Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: moveHMM
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/moveHMM
Animal Movement Modelling using Hidden Markov Models
10 versions
Latest release: over 1 year ago
7 dependent packages
680 downloads last month
Papers Mentioning moveHMM 22
10.1002/ece3.4823
Animal movement tools (amt): R package for managing tracking data and conducting habitat selection analysesCited by: 274
Author(s): Johannes Signer, John Fieberg, Tal Avgar
Software Mentions: 10
Published: over 5 years ago
10.1038/s41598-018-35306-6
Individual variability in diving, movement and activity patterns of adult bearded seals in Svalbard, NorwayCited by: 21
Author(s): Charmain D. Hamilton, Kit M. Kovacs, Christian Lydersen
Software Mentions: 9
Published: almost 6 years ago
10.1098/rsif.2018.0084
Understanding the ontogeny of foraging behaviour: insights from combining marine predator bio-logging with satellite-derived oceanography in hidden Markov modelsCited by: 72
Author(s): W. James Grecian, Jude V. Lane, Théo Michelot, Helen M. Wade, Keith C. Hamer
Software Mentions: 7
Published: over 6 years ago
10.1186/s40462-020-00232-8
Patterns of foraging activity and fidelity in a southeast Asian flying foxCited by: 5
Author(s): Elodie Schloesing, René Chambón, Annelise Tran, Kinley Choden, Sébastien Ravon, Jonathan H. Epstein, Thavry Hoem, Neil M. Furey, Morgane Labadie, Mathieu Bourgarel, Hélène M. De Nys, Alexandre Caron, Julien Cappelle
Software Mentions: 7
Published: almost 4 years ago
10.1098/rsos.201758
Spatial cognitive ability is associated with transitory movement speed but not straightness during the early stages of explorationCited by: 8
Author(s): Christine E. Beardsworth, Mark A. Whiteside, Lucy A. Capstick, Philippa R. Laker, Ellis J. G. Langley, Ran Nathan, Yotam Orchan, Sivan Toledo, Jayden O. van Horik, Joah R. Madden
Software Mentions: 5
Published: over 3 years ago
10.1186/s40462-021-00264-8
Caution is warranted when using animal space-use and movement to infer behavioral statesCited by: 9
Author(s): Frances E. Buderman, Tess M. Gingery, Duane R. Diefenbach, Laura C. Gigliotti, Danielle R. Begley-Miller, Marc E. McDill, Bret D. Wallingford, Christopher S. Rosenberry, Patrick J. Drohan
Software Mentions: 4
Published: over 3 years ago
10.1098/rsos.191161
Identifying fishing grounds from vessel tracks: model-based inference for small scale fisheriesCited by: 14
Author(s): Tania Mendo, Sophie Smout, Theoni Photopoulou, Mark James
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0244220
Deterministic modelling of seed dispersal based on observed behaviours of an endemic primate in BrazilCited by: 1
Author(s): Nima Raghunathan, Louis François, Eliana Cazetta, Jean-Luc Pitance, Kristel De Vleeschouwer, Alain Hambuckers
Software Mentions: 3
Published: over 3 years ago
10.1002/ece3.7670
Recording fine‐scale movement of ground beetles by two methods: Potentials and methodological pitfallsCited by: 5
Author(s): Jana Růžičková, Zoltán Elek
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-021-86363-3
Behavioral state resource selection in invasive wild pigs in the Southeastern United StatesCited by: 18
Author(s): Lindsay M. Clontz, Kim M. Pepin, Kurt C. VerCauteren, James C. Beasley
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-021-93253-1
Movement patterns and activity levels are shaped by the neonatal environment in Antarctic fur seal pupsCited by: 2
Author(s): Rebecca Nagel, Sina Mews, Timo Adam, Claire Stainfield, Cameron Fox‐Clarke, Camille Toscani, Roland Langrock, Jaume Forcada, Joseph I. Hoffman
Software Mentions: 2
Published: about 3 years ago
10.1186/s40462-016-0086-5
Path segmentation for beginners: an overview of current methods for detecting changes in animal movement patternsCited by: 137
Author(s): Hendrik Edelhoff, Johannes Signer, Niko Balkenhol
Software Mentions: 2
Published: about 8 years ago
10.1186/s40462-016-0090-9
Navigating uncertain waters: a critical review of inferring foraging behaviour from location and dive data in pinnipedsCited by: 50
Author(s): Matt I. D. Carter, Kimberley A. Bennett, Clare B. Embling, Phil Hosegood, Debbie J. F. Russell
Software Mentions: 2
Published: almost 8 years ago
10.1098/rsos.201614
Environmental conditions alter behavioural organization and rhythmicity of a large Arctic ruminant across the annual cycleCited by: 10
Author(s): Floris M. van Beest, Larissa T. Beumer, Marianna Chimienti, Jean‐Pierre Desforges, Nicholas Per Huffeldt, Stine Højlund Pedersen, Niels Martin Schmidt
Software Mentions: 1
Published: almost 4 years ago
10.1186/s40462-019-0166-4
Black bears alter movements in response to anthropogenic features with time of day and seasonCited by: 38
Author(s): Katherine A. Zeller, David W. Wattles, Laura Conlee, Stephen DeStefano
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-020-74329-w
Hidden Markov Models reveal a clear human footprint on the movements of highly mobile African wild dogsCited by: 10
Author(s): Scott Creel, Johnathan Merkle, Thandiwe Mweetwa, Matthew S. Becker, Henry Mwape, Twakundine Simpamba, Chuma Simukonda
Software Mentions: 1
Published: almost 4 years ago
10.1186/s40462-020-00213-x
An application of upscaled optimal foraging theory using hidden Markov modelling: year-round behavioural variation in a large arctic herbivoreCited by: 19
Author(s): Larissa T. Beumer, Jennifer Pohle, Niels Martin Schmidt, Marianna Chimienti, Jean‐Pierre Desforges, Lars H. Hansen, Roland Langrock, Stine Højlund Pedersen, Mikkel Stelvig, Floris M. van Beest
Software Mentions: 1
Published: over 4 years ago
10.1016/j.dib.2019.104598
Spatio-temporal dataset of building occupantsCited by: 1
Author(s): Muhammad Arslan, Christophe Cruz, Dominique Ginhac
Software Mentions: 1
Published: almost 5 years ago
10.1002/ece3.2795
A hidden Markov movement model for rapidly identifying behavioral states from animal tracksCited by: 46
Author(s): Kim Whoriskey, Marie Auger‐Méthé, Christoffer Moesgaard Albertsen, Frederick G. Whoriskey, Thomas R. Binder, Charles C. Krueger, Joanna Mills Flemming
Software Mentions: 1
Published: over 7 years ago
10.1002/ece3.5519
State‐space modeling reveals habitat perception of a small terrestrial mammal in a fragmented landscapeCited by: 6
Author(s): Riana Gardiner, Rowena Hamer, Vianey Leos‐Barajas, César Peñaherrera-Palma, Menna Lloyd Jones, Christopher N. Johnson
Software Mentions: 1
Published: about 5 years ago
10.1186/s40462-020-0195-z
Understanding decision making in a food-caching predator using hidden Markov modelsCited by: 12
Author(s): Mohammad S. Farhadinia, Théo Michelot, Paul J. Johnson, Luke Hunter, David W. Macdonald
Software Mentions: 1
Published: over 4 years ago
10.1098/rsos.192164
Evidence of links between haematological condition and foraging behaviour in northern gannets ( <i>Morus bassanus</i> )Cited by: 10
Author(s): Z. Malvat, Sharon A. Lynch, Ashley Bennison, Mark Jessopp
Software Mentions: 1
Published: over 4 years ago