cran: missForest | Projects | Ecosyste.ms: Papers

10.2196/12875

Developing the National Usability-Focused Health Information System Scale for Physicians: Validation Study
Cited by: 26
Author(s): Hannele Hyppönen, Johanna Kaipio, Tarja Heponiemi, Tinja Lääveri, Anna Mari Aalto, Jukka Vänskä, Marko Elovainio
Software Mentions: 15
Published: over 5 years ago

10.1186/s40560-021-00531-1

Development and validation of an online model to predict critical COVID-19 with immune-inflammatory parameters
Cited by: 7
Author(s): Yue Gao, Lingxi Chen, Jianhua Chi, Shaoqing Zeng, Xikang Feng, Huayi Li, Dan Liŭ, Xiang Feng, Siyuan Wang, Ya Wang, Rui Yu, Yuan Yuan, Sen Xu, Chunrui Li, Wei Zhang, Shuai Cheng Li, Qinglei Gao
Software Mentions: 12
Published: almost 4 years ago

10.1017/S003329171800315X

A machine learning ensemble to predict treatment outcomes following an Internet intervention for depression
Cited by: 37
Author(s): Rahel Pearson, Derek Pisner, Björn Meyer, Jason Shumake, Christopher G. Beevers
Software Mentions: 11
Published: about 6 years ago

10.1186/s12859-017-1579-y

metaX: a flexible and comprehensive software for processing metabolomics data
Cited by: 402
Author(s): Bo Wen, Zhanlong Mei, Chunwei Zeng, Siqi Liu
Software Mentions: 11
Published: almost 8 years ago

10.1038/s41598-021-95688-y

Identification of markers that distinguish adipose tissue and glucose and insulin metabolism using a multi-modal machine learning approach
Cited by: 6
Author(s): Josefin Henninger, Björn Eliasson, Ulf Smith, Aidin Rawshani
Software Mentions: 10
Published: over 3 years ago

10.3389/fninf.2021.561689

QDECR: A Flexible, Extensible Vertex-Wise Analysis Framework in R
Cited by: 13
Author(s): Sander Lamballais, Ryan L. Muetzel
Software Mentions: 9
Published: over 3 years ago

10.1186/s12864-018-5092-0

High-throughput proteomic profiling of the fish liver following bacterial infection
Cited by: 58
Author(s): Dwight R. Causey, Moritz A N Pohl, David Stead, Samuel Martín, Christopher J. Secombes, Daniel J. Macqueen
Software Mentions: 9
Published: about 6 years ago

10.1007/s00406-021-01291-7

Differential psychological response to the COVID-19 pandemic in psychiatric inpatients compared to a non-clinical population from Germany
Cited by: 7
Author(s): Stephanie Rek, Daniel Freeman, Matthias Reinhard, Markus Bühner, Sofie Grosen, Peter Falkai, Kristina Adorjan, Frank Padberg
Software Mentions: 9
Published: over 3 years ago

10.1007/s00122-021-03882-3

Genomic signatures of selection for resistance to stripe rust in Austrian winter wheat
Cited by: 2
Author(s): Laura Morales, Sebastian Michel, Christian Ametz, Hermann Gregor Dallinger, Franziska Löschenberger, Anton Neumayer, Simone Zimmerl, Hermann Buerstmayr
Software Mentions: 8
Published: over 3 years ago

10.3390/metabo11070463

Sex-Specific Relationship between the Cardiorespiratory Fitness and Plasma Metabolite Patterns in Healthy Humans—Results of the KarMeN Study
Cited by: 5
Author(s): Sina Kistner, Maik Döring, Ralf Krüger, M Rist, Christoph H. Weinert, Diana Bunzel, Benedikt Merz, Katrin Radloff, Rainer Neumann, Sascha Härtel, Achim Bub
Software Mentions: 8
Published: over 3 years ago

10.3389/fpls.2019.00514

Association Between the Success of an Invasive Macrophyte, Environmental Variables and Abundance of a Competing Native Macrophyte
Cited by: 12
Author(s): Mikaela Marques Pulzatto, Eduardo Ribeiro Cunha, Mário Sérgio Dainez-Filho, Sidinei Magela Thomaz
Software Mentions: 8
Published: over 5 years ago

10.1038/s41598-018-29523-2

Prognostication and Risk Factors for Cystic Fibrosis via Automated Machine Learning
Cited by: 46
Author(s): Ahmed M. Alaa, Mihaela van der Schaar
Software Mentions: 8
Published: over 6 years ago

10.1038/s41598-019-50260-7

Plasma metabolites associated with homeostatic model assessment of insulin resistance: metabolite-model design and external validation
Cited by: 5
Author(s): Pablo Hernández‐Alonso, Jesús García‐Gavilán, Lucía Camacho-Barcia, Anders Sjödin, Thorsten Hansen, Jo Harrold, Jordi Salas‐Salvadó, Jason C.G. Halford, Sı́lvia Canudas, Mònica Bulló
Software Mentions: 7
Published: about 5 years ago

10.3390/plants10010029

Factors Influencing Genomic Prediction Accuracies of Tropical Maize Resistance to Fall Armyworm and Weevils
Cited by: 6
Author(s): Arfang Badji, Lewis Machida, Daniel Bomet Kwemoi, Frank Kumi, Dennis Okii, Natasha Mwila, Symphorien Agbahoungba, Angele Ibanda, Astère Bararyenya, Selma Ndapewa Nghituwamhata, Thomas Odong, Peter Wasswa, Michael Otim, Mildred Ochwo-Ssemakula, Herbert Talwana, Godfrey Asea, Samuel Kyamanywa, Patrick Rubaihayo
Software Mentions: 7
Published: almost 4 years ago

10.1038/s41598-020-63186-2

Socially engaged calves are more likely to be colonised by VTEC O157:H7 than individuals showing signs of poor welfare
Cited by: 4
Author(s): Lena-Mari Tamminen, C. Reed Hranac, Johan Dicksved, Erik Eriksson, Ulf Emanuelson, Linda J. Keeling
Software Mentions: 7
Published: over 4 years ago

10.5811/westjem.2021.3.50116

Emergency Department-initiated High-flow Nasal Cannula for COVID-19 Respiratory Distress
Cited by: 7
Author(s): Zachary J. Jarou, David G. Beiser, Willard W. Sharp, Ravi Ravi Chacko, Deirdre Goode, Daniel Rubin, Dinesh J. Kurian, Allison Dalton, Stephen Estime, Michael O’Connor, Bhakti Patel, John P. Kress, Thomas Spiegel
Software Mentions: 7
Published: over 3 years ago

10.1111/ddi.12638

Dimensions of biodiversity loss: Spatial mismatch in land‐use impacts on species, functional and phylogenetic diversity of European bees
Cited by: 41
Author(s): Adriana De Palma, Michael Kuhlmann, Rob Bugter, Simon Ferrier, Andrew J. Hoskins, Simon G. Potts, Stuart P. M. Roberts, Oliver Schweiger, Andy Purvis
Software Mentions: 7
Published: over 7 years ago

10.3389/fonc.2020.603717

Enhanced Angiogenesis in Salivary Duct Carcinoma Ex-Pleomorphic Adenoma
Cited by: 6
Author(s): Takayoshi Suzuki, Satoshi Kano, Masanobu Suzuki, Shinichiro Yasukawa, Takatsugu Mizumachi, Nobuko Tsushima, Kanako C. Hatanaka, Yutaka Hatanaka, Yoshihiro Matsuno, Akihiro Homma
Software Mentions: 7
Published: almost 4 years ago

10.1186/s40560-021-00525-z

Machine learning-based prediction models for accidental hypothermia patients
Cited by: 4
Author(s): Yohei Okada, Tasuku Matsuyama, Sachiko Morita, Naoki Ehara, Nobuhiro Miyamae, Takaaki Jo, Yorihisa Sumida, Nobunaga Okada, Makoto Watanabe, Masahiro Nozawa, Ayumu Tsuruoka, Yoshihiro Fujimoto, Yasuko Okumura, Tetsuhisa Kitamura, Ryoji Iiduka, Shigeru Ohtsuru
Software Mentions: 7
Published: almost 4 years ago

10.1186/s12967-020-02505-7

ANDC: an early warning score to predict mortality risk for patients with Coronavirus Disease 2019
Cited by: 44
Author(s): Zhihong Weng, Qiaosen Chen, Sumeng Li, Huadong Li, Qian Zhang, Sihong Lu, Ling Wu, Leiqun Xiong, Bobin Mi, Di Liu, Mengji Lu, Dongliang Yang, Hongbo Jiang, Shuang Zheng, Xin Zheng
Software Mentions: 7
Published: over 4 years ago

10.1371/journal.pntd.0008015

Plasma metabolomics of the time resolved response to Opisthorchis felineus infection in an animal model (golden hamster, Mesocricetus auratus)
Cited by: 9
Author(s): Daria Kokova, Aswin Verhoeven, Ekaterina A. Perina, В. В. Иванов, Elena M. Knyazeva, Irina V. Saltykova, Oleg A. Mayboroda
Software Mentions: 7
Published: almost 5 years ago

10.1016/j.jprot.2018.08.013

Proteomic comparison of selective breeding and growth hormone transgenesis in fish: Unique pathways to enhanced growth
Cited by: 29
Author(s): Dwight R. Causey, Jin-Hyoung Kim, David Stead, Samuel Martín, Robert H. Devlin, Daniel J. Macqueen
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0219774

Predicting drug activity against cancer cells by random forest models based on minimal genomic information and chemical properties
Cited by: 60
Author(s): Alex P. Lind, Peter C. Anderson
Software Mentions: 6
Published: over 5 years ago

10.1155/2020/8810143

An Efficient and Effective Model to Handle Missing Data in Classification
Cited by: 8
Author(s): Kamran Mehrabani-Zeinabad, Marziyeh Doostfatemeh, Seyyed Mohammad Taghi Ayatollahi
Software Mentions: 6
Published: about 4 years ago

10.1016/j.tube.2019.101859

Distinct serum biosignatures are associated with different tuberculosis treatment outcomes
Cited by: 22
Author(s): Katharina Ronacher, Novel N. Chegou, Léanie Kleynhans, Joel Fleury Djoba Siawaya, Nelita du Plessis, André G. Loxton, Elizna Maasdorp, Gerard Tromp, Martin Kidd, Kim Stanley, Magdalena Kriel, Ângela Menezes, Andrea Gutschmidt, Gian D. van der Spuy, Robin M. Warren, Reynaldo Dietze, Alphonse Okwera, Bonnie Thiel, John T. Belisle, Jacqueline M. Cliff, W. Henry Boom, John L. Johnson, Paul D. van Helden, Hazel M. Dockrell, Gerhard Walzl
Software Mentions: 6
Published: over 5 years ago

10.3390/nu13020549

Circulating Metabolites Associated with Postprandial Satiety in Overweight/Obese Participants: The SATIN Study
Cited by: 5
Author(s): Lucia Camacho-Barcía, Jesús García‐Gavilán, Christopher Papandreou, Thorsten Hansen, Jo Harrold, Graham Finlayson, John Blundell, Anders Sjödin, Jason C.G. Halford, Mònica Bulló
Software Mentions: 6
Published: almost 4 years ago

10.3389/fpsyg.2018.00644

Reading Profiles in Multi-Site Data With Missingness
Cited by: 3
Author(s): Mark A. Eckert, Kenneth I. Vaden, Mulugeta Gebregziabher
Software Mentions: 6
Published: over 6 years ago

10.1007/s11306-016-1030-9

Non-targeted UHPLC-MS metabolomic data processing methods: a comparative investigation of normalisation, missing value imputation, transformation and scaling
Cited by: 211
Author(s): Riccardo Di Guida, Jasper Engel, J. William Allwood, Ralf J. M. Weber, Steven J.M. Jones, Ulf Sommer, Mark R. Viant, Warwick B. Dunn
Software Mentions: 6
Published: over 8 years ago

10.1038/s41598-021-87829-0

GWAS analysis reveals distinct pathogenicity profiles of Australian Parastagonospora nodorum isolates and identification of marker-trait-associations to septoria nodorum blotch
Cited by: 7
Author(s): H. Phan, Eiko Furuki, Lukas Hunziker, Kasia Rybak, Kar‐Chun Tan
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pcbi.1009197

Multidimensional analysis of immune responses identified biomarkers of recent Mycobacterium tuberculosis infection
Cited by: 1
Author(s): Tessa Lloyd, Pia Steigler, Cheleka A M Mpande, Virginie Rozot, Boitumelo Mosito, Constance Schreuder, Timothy D. Reid, Mark Hatherill, Thomas J. Scriba, Francesca Little, Elisa Nemes
Software Mentions: 6
Published: over 3 years ago

10.1038/s41598-021-86735-9

Machine learning is the key to diagnose COVID-19: a proof-of-concept study
Cited by: 17
Author(s): Cédric Gangloff, Sonia Rafi, Guillaume Bouzillé, Louis Soulat, Marc Cuggia
Software Mentions: 6
Published: over 3 years ago

10.3390/ijms19020357

Genotyping by Sequencing Highlights a Polygenic Resistance to Ralstonia pseudosolanacearum in Eggplant (Solanum melongena L.)
Cited by: 28
Author(s): Sylvia Salgon, Morgane Raynal, Sylvain Lebon, Jean Michel Baptiste, M. C. Daunay, Jacques Dintinger, Cyril Jourda
Software Mentions: 6
Published: almost 7 years ago

10.1093/gigascience/giaa116

The Dynamic Proteome of Oligodendrocyte Lineage Differentiation Features Planar Cell Polarity and Macroautophagy Pathways
Cited by: 8
Author(s): Paria Pooyan, Razieh Karamzadeh, Mehdi Mirzaei, Anna Meyfour, Ardeshir Amirkhan, Yunqi Wu, Vivek Gupta, Hossein Baharvand, Mohammad Javan, Ghasem Hosseini Salekdeh
Software Mentions: 6
Published: about 4 years ago

10.21105/joss.02410

Viime: Visualization and Integration of Metabolomics Experiments
Cited by: 6
Author(s): Roni Choudhury, Jon Beezley, Brandon Davis, Jared Tomeck, Samuel Gratzl, Lilian Golzarri‐Arroyo, Jun Wan, Daniel Raftery, Jeff Baumes, Thomas M. O’Connell
Software Mentions: 6
Published: about 4 years ago

10.1371/journal.pone.0253064

Cognitive decline in Huntington’s disease in the Digitalized Arithmetic Task (DAT)
Cited by: 5
Author(s): Marine Lunven, Jennifer Hamet Bagnou, Katia Youssov, Alexis Gabadinho, Rafika Fliss, Justine Montillot, Étienne Audureau, Blanche Bapst, Graça Morgado, Ralf Reilmann, Robin Schubert, Monica Busse, David Craufurd, Renaud Massart, Anne Elizabeth Rosser, Anne‐Catherine Bachoud‐Lévi
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0187344

Assessing risk of fibrosis progression and liver-related clinical outcomes among patients with both early stage and advanced chronic hepatitis C
Cited by: 23
Author(s): Monica A. Konerman, Dongxia Lu, Yiwei Zhang, Mary Thomson, Ji Zhu, Aashesh Verma, Boang Liu, Nizar Talaat, Ulysses Balis, Peter Higgins, Anna S. Lok, Akbar K. Waljee
Software Mentions: 5
Published: about 7 years ago

10.3389/fgene.2020.522831

Systematic Analyses of the Differentially Expressed Alternative Splicing Events in Gastric Cancer and Its Clinical Significance
Cited by: 2
Author(s): Changwei Lin, Bowen Yu, Mao Zhang, Yifei Chen, Liang Li, Delong Zhao
Software Mentions: 5
Published: about 4 years ago

10.3389/fgene.2019.01091

Phenotype Prediction and Genome-Wide Association Study Using Deep Convolutional Neural Network of Soybean
Cited by: 71
Author(s): Yang Liu, Duolin Wang, Fei He, Juexin Wang, Trupti Joshi, Dong Xu
Software Mentions: 5
Published: about 5 years ago

10.3390/ijms22031073

Machine Learning Analysis of Longevity-Associated Gene Expression Landscapes in Mammals
Cited by: 6
Author(s): Anton Kulaga, Eugen Ursu, Dmitri Toren, Vladyslava Tyshchenko, Rodrigo Guinea, Malvina Pushkova, Vadim E. Fraifeld, Robi Tăcutu
Software Mentions: 5
Published: almost 4 years ago

10.1186/s12874-020-01080-1

Accuracy of random-forest-based imputation of missing data in the presence of non-normality, non-linearity, and interaction
Cited by: 68
Author(s): Shangzhi Hong, Henry Lynn
Software Mentions: 5
Published: over 4 years ago

10.3390/ijerph18031333

Handling Complex Missing Data Using Random Forest Approach for an Air Quality Monitoring Dataset: A Case Study of Kuwait Environmental Data (2012 to 2018)
Cited by: 28
Author(s): Ahmad Alsaber, Jiazhu Pan, Adeeba Al‐Hurban
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-021-90654-0

Kernel weighted least square approach for imputing missing values of metabolomics data
Cited by: 7
Author(s): Nishith Kumar, Md. Rakibul Hoque, Masahiro Sugimoto
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-020-66558-w

Associations among neurophysiology measures in irritable bowel syndrome (IBS) and their relevance for IBS symptoms
Cited by: 11
Author(s): Irina Midenfjord, Annikka Polster, Henrik Sjövall, Peter Friberg, Hans Törnblom, Magnus Simrén
Software Mentions: 5
Published: over 4 years ago

10.1038/s41598-019-53451-4

Machine Learning Approach for Prescriptive Plant Breeding
Cited by: 51
Author(s): Kyle A. Parmley, R. A. Higgins, Baskar Ganapathysubramanian, Soumik Sarkar, Asheesh K. Singh
Software Mentions: 5
Published: about 5 years ago

10.1186/s12859-014-0346-6

Missing value imputation in high-dimensional phenomic data: imputable or not, and how?
Cited by: 98
Author(s): Serena G. Liao, Yan Lin, Dongwan Kang, Divay Chandra, Jessica Bon, Naftali Kaminski, Frank C. Sciurba, George C. Tseng
Software Mentions: 5
Published: about 10 years ago

10.1038/srep21689

Multiple Imputation for General Missing Data Patterns in the Presence of High-dimensional Data
Cited by: 59
Author(s): Yi Deng, Changgee Chang, Moges Ido, Qi Long
Software Mentions: 5
Published: almost 9 years ago

10.3390/jcm9082341

Targeted Urine Metabolomics for Monitoring Renal Allograft Injury and Immunosuppression in Pediatric Patients
Cited by: 12
Author(s): Tara K. Sigdel, Andrew Schroeder, Joshua Yang, Reuben D. Sarwal, Juliane Liberto, Minnie M. Sarwal
Software Mentions: 5
Published: over 4 years ago

10.1186/s12859-021-04138-z

Dynamic model updating (DMU) approach for statistical learning model building with missing data
Cited by: 3
Author(s): Richa Jain, Wei Xu
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-021-81205-8

Ranking of a wide multidomain set of predictor variables of children obesity by machine learning variable importance techniques
Cited by: 14
Author(s): Helena Marcos-Pasero, Gonzalo Colmenarejo, Elena Aguilar-Aguilar, Ana Ramı́rez de Molina, Guillermo Reglero, Viviana Loria-Kohen
Software Mentions: 4
Published: almost 4 years ago

10.3389/fimmu.2021.607827

Validation and Optimization of Host Immunological Bio-Signatures for a Point-of-Care Test for TB Disease
Cited by: 22
Author(s): Hygon Mutavhatsindi, Gian D. van der Spuy, Stephanus T. Malherbe, Jayne S. Sutherland, Annemieke Geluk, Harriet Mayanja‐Kizza, Amelia C. Crampin, Desta Kassa, Rawleigh Howe, Adane Mihret, Jacob Sheehama, Emmanuel Nepolo, Gunar Günther, Hazel M. Dockrell, Paul L. A. M. Corstjens, Kim Stanley, Gerhard Walzl, Novel N. Chegou, Ae-Tbc ScreenTB Consortia
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12859-019-2619-6

Evaluation of linear models and missing value imputation for the analysis of peptide-centric proteomics
Cited by: 16
Author(s): Philip Berg, Evan W. McConnell, Leslie M. Hicks, S. Popescu, George V. Popescu
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-018-32966-2

Variable importance for sustaining macrophyte presence via random forests: data imputation and model settings
Cited by: 8
Author(s): Wout Van Echelpoel, Peter Goethals
Software Mentions: 4
Published: about 6 years ago

10.1186/s12888-021-03425-6

The COVID-19 Pandemic Mental Health Questionnaire (CoPaQ): psychometric evaluation and compliance with countermeasures in psychiatric inpatients and non-clinical individuals
Cited by: 19
Author(s): Stephanie Rek, Markus Bühner, Matthias Reinhard, Daniel Freeman, Daniel Keeser, Kristina Adorjan, Peter Falkai, Frank Padberg
Software Mentions: 4
Published: over 3 years ago

10.1093/gerona/glz023

The Effects of Graded Levels of Calorie Restriction: XIV. Global Metabolomics Screen Reveals Brown Adipose Tissue Changes in Amino Acids, Catecholamines, and Antioxidants After Short-Term Restriction in C57BL/6 Mice
Cited by: 14
Author(s): Cara L Green, Sharon E. Mitchell, Davina Derous, Yingchun Wang, Luonan Chen, Jing–Dong Jackie Han, Daniel Promislow, David Lusseau, Alex Douglas, John R. Speakman
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-018-29433-3

Using Multi-Scale Genetic, Neuroimaging and Clinical Data for Predicting Alzheimer’s Disease and Reconstruction of Relevant Biological Mechanisms
Cited by: 46
Author(s): Shashank Khanna, Daniel Domingo‐Fernándéz, Anandhi Iyappan, Mohammad Asif Emon, Martin Hofmann-Apitius, Holger Fröhlich
Software Mentions: 4
Published: over 6 years ago

10.3389/fpubh.2021.680054

The Optimal Machine Learning-Based Missing Data Imputation for the Cox Proportional Hazard Model
Cited by: 12
Author(s): Chao-Yu Guo, Ying-Chen Yang, Yi‐Hau Chen
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0235144

A novel scaling methodology to reduce the biases associated with missing data from commercial activity monitors
Cited by: 6
Author(s): Ruairi O’Driscoll, Jake Turicchi, Cristiana Duarte, Joanna Michałowska, Sofus C. Larsen, António Labisa Palmeira, Berit Lilienthal Heitmann, Graham Horgan, R. James Stubbs
Software Mentions: 4
Published: over 4 years ago

10.3389/frai.2021.625573

Artificial Intelligence for Prognostic Scores in Oncology: a Benchmarking Study
Cited by: 2
Author(s): Hugo Loureiro, Tim Becker, Anna Bauer-Mehren, Narges Ahmidi, Janick Weberpals
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0232639

Computed tomography-derived radiomic signature of head and neck squamous cell carcinoma (peri)tumoral tissue for the prediction of locoregional recurrence and distant metastasis after concurrent chemo-radiotherapy
Cited by: 27
Author(s): Simon Keek, Sebastian Sanduleanu, Frederik Wesseling, Reinout de Roest, Michiel W. M. van den Brekel, Martijn van der Heijden, Conchita Vens, Giuseppina Calareso, Lisa Licitra, Kathrin Scheckenbach, Marije R. Vergeer, C. René Leemans, Ruud H. Brakenhoff, Irene Nauta, Stefano Cavalieri, Henry C. Woodruff, Tito Poli, Ralph T.H. Leijenaar, Frank Hoebers, Philippe Lambin
Software Mentions: 4
Published: over 4 years ago

10.1001/jamanetworkopen.2021.1450

Machine Learning Assessment of Early Life Factors Predicting Suicide Attempt in Adolescence or Young Adulthood
Cited by: 21
Author(s): Marie C. Navarro, Isabelle Ouellet‐Morin, Marie‐Claude Geoffroy, Michel Boivin, Richard E. Tremblay, Sylvana M. Côté, Massimiliano Orri
Software Mentions: 4
Published: almost 4 years ago

10.3390/nu11051032

Plasma Metabolites Associated with Coffee Consumption: A Metabolomic Approach within the PREDIMED Study
Cited by: 15
Author(s): Christopher Papandreou, Pablo Hernández‐Alonso, Mònica Bulló, Miguel Ruiz‐Canela, Edward Yu, Marta Guasch‐Ferré, Estefanía Toledo, Courtney Dennis, Amy Deik, Clary B. Clish, Cristina Razquín, Dolores Corella, Ramón Estruch, Emilio Ros, Montserrat Fitó, Fernando Arós, Miquel Fiol, José Lapetra, Cristina Ruano, Liming Liang, Miguel Ángel Martínez‐González, Frank B. Hu, Jordi Salas‐Salvadó
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-020-66199-z

Adipose tissue morphology, imaging and metabolomics predicting cardiometabolic risk and family history of type 2 diabetes in non-obese men
Cited by: 17
Author(s): Aidin Rawshani, Björn Eliasson, Araz Rawshani, Josefin Henninger, Adil Mardinoğlu, Åsa Carlsson, Maja Sohlin, Maria Ljungberg, Ann Hammarstedt, Annika Rosengren, Ulf Smith
Software Mentions: 4
Published: over 4 years ago

10.3389/fdata.2021.693869

TSI-GNN: Extending Graph Neural Networks to Handle Missing Data in Temporal Settings
Cited by: 3
Author(s): D. Benjamin Gordon, Panayiotis Petousis, Henry Zheng, Davina Zamanzadeh, Alex A. T. Bui
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-020-79924-5

Urban street tree biodiversity and antidepressant prescriptions
Cited by: 74
Author(s): Melissa R. Marselle, Diana E. Bowler, Jan Watzema, David Eichenberg, Toralf Kirsten, Aletta Bonn
Software Mentions: 4
Published: almost 4 years ago

10.7717/peerj.4091

Relationships between consumption of ultra-processed foods, gestational weight gain and neonatal outcomes in a sample of US pregnant women
Cited by: 76
Author(s): Karthik W. Rohatgi, Rachel A. Tinius, W. Todd Cade, Euridice Martínez Steele, Alison G. Cahill, Diana C. Parra
Software Mentions: 3
Published: about 7 years ago

10.1186/s13195-017-0240-3

Validating the role of the Australian National University Alzheimer’s Disease Risk Index (ANU-ADRI) and a genetic risk score in progression to cognitive impairment in a population-based cohort of older adults followed for 12 years
Cited by: 23
Author(s): Shea J. Andrews, Ranmalee Eramudugolla, Jorge Íván Bonilla Vélez, Nicolas Cherbuin, Simon Easteal, Kaarin J. Anstey
Software Mentions: 3
Published: almost 8 years ago

10.1186/s12859-016-0899-7

Impact of imputation methods on the amount of genetic variation captured by a single-nucleotide polymorphism panel in soybeans
Cited by: 19
Author(s): Alencar Xavier, William M. Muir, Katy Martin Rainey
Software Mentions: 3
Published: almost 9 years ago

10.1186/s12859-020-03592-5

Methylation data imputation performances under different representations and missingness patterns
Cited by: 11
Author(s): Pietro Di Lena, Claudia Sala, Andrea Prodi, Christine Nardini
Software Mentions: 3
Published: over 4 years ago

10.1186/s12888-020-02728-4

Utilization of machine learning to test the impact of cognitive processing and emotion recognition on the development of PTSD following trauma exposure
Cited by: 4
Author(s): Mareike Augsburger, Isaac R. Galatzer‐Levy
Software Mentions: 3
Published: over 4 years ago

10.1186/s12888-018-1618-x

Cross-sectional relationship of perceived familial protective factors with depressive symptoms in vulnerable youth
Cited by: 2
Author(s): Hanna Schwendemann, Heidi Kuttler, Thomas Mößle, Eva Maria Bitzer
Software Mentions: 3
Published: almost 7 years ago

10.1186/s13040-021-00274-7

Evaluation of different approaches for missing data imputation on features associated to genomic data
Cited by: 12
Author(s): Ben Omega Petrazzini, Hugo Naya, Fernando López-Bello, Gustavo E. Vazquez, Lucía Spangenberg
Software Mentions: 3
Published: over 3 years ago

10.1155/2017/2437608

Metabolomic Biomarker Identification in Presence of Outliers and Missing Values
Cited by: 23
Author(s): Nishith Kumar, Md. Rakibul Hoque, Md. Shahjaman, S. M. Shahinul Islam, Md. Nurul Haque Mollah
Software Mentions: 3
Published: almost 8 years ago

10.3390/metabo10040135

“Notame”: Workflow for Non-Targeted LC–MS Metabolic Profiling
Cited by: 61
Author(s): Anton Klåvus, Marietta Kokla, Stefania Noerman, Ville Koistinen, Marjo Tuomainen, Iman Zarei, Topi Meuronen, Merja R. Häkkinen, Soile Rummukainen, Ambrin Farizah Babu, Taisa Sallinen, Olli Kärkkäinen, Jussi Paananen, David Broadhurst, Carl Brunius, Kati Hanhineva
Software Mentions: 3
Published: over 4 years ago

10.7717/peerj.5795

Creating functional groups of marine fish from categorical traits
Cited by: 13
Author(s): Monique Ladds, Nokuthaba Sibanda, Richard Arnold, Matthew R. Dunn
Software Mentions: 3
Published: about 6 years ago

10.1111/acel.12570

The effects of graded levels of calorie restriction: IX. Global metabolomic screen reveals modulation of carnitines, sphingolipids and bile acids in the liver of C57BL/6 mice
Cited by: 45
Author(s): Cara L Green, Sharon E. Mitchell, Davina Derous, Yingchun Wang, Luonan Chen, Jing–Dong Jackie Han, Daniel E. L. Promislow, David Lusseau, Alex Douglas, John R. Speakman
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pmed.1002188

Leukocyte Telomere Length in Relation to 17 Biomarkers of Cardiovascular Disease Risk: A Cross-Sectional Study of US Adults
Cited by: 117
Author(s): David H. Rehkopf, Belinda L. Needham, Jue Lin, Elizabeth H. Blackburn, Ami R. Zota, Janet M. Wojcicki, Elissa S. Epel
Software Mentions: 3
Published: about 8 years ago

10.1371/journal.pone.0160323

Essential Indicators Identifying Chronic Inorganic Mercury Intoxication: Pooled Analysis across Multiple Cross-Sectional Studies
Cited by: 29
Author(s): Doering Stefan, Stephan Blüml, Ursula Berger
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0200747

Alcohol consumption and future hospital usage: The EPIC-Norfolk prospective population study
Cited by: 2
Author(s): Robert Luben, Shabina Hayat, Angela A. Mulligan, Marleen Lentjes, Nicholas J. Wareham, Paul D.P. Pharoah, Kay‐Tee Khaw
Software Mentions: 3
Published: over 6 years ago

10.1038/s41421-020-00231-4

Initial whole-genome sequencing and analysis of the host genetic contribution to COVID-19 severity and susceptibility
Cited by: 150
Author(s): Fang Wang, Shujia Huang, Rongsui Gao, Yuwen Zhou, Changxiang Lai, Zhichao Li, Wenjie Xian, Xiaobo Qian, Zhiyu Li, Yushan Huang, Qiyuan Tang, Panhong Liu, Ruikun Chen, Rong Liu, Xuan Li, Xin Tong, Xuan Zhou, Yong Bai, Gang Dong, Tao Zhang, Xun Xu, Jian Wang, Huanming Yang, Siyang Liu, Qin He, Xin Jin, Lei Liu
Software Mentions: 3
Published: about 4 years ago

10.1002/ece3.2390

Integrating data‐deficient species in analyses of evolutionary history loss
Cited by: 17
Author(s): Simon Véron, Caterina Penone, Philippe Clergeau, Gabriel C. Costa, Brunno F. Oliveira, Vinícius Avelar São-Pedro, Sandrine Pavoine
Software Mentions: 3
Published: about 8 years ago

10.3389/fnbeh.2021.701971

The Interplay Between Prenatal Adversity, Offspring Dopaminergic Genes, and Early Parenting on Toddler Attentional Function
Cited by: 1
Author(s): Eszter Székely, Alexia Jolicoeur‐Martineau, Leslie Atkinson, Robert D. Levitan, Meir Steiner, John Lydon, Alison S. Fleming, James L. Kennedy, Ashley Wazana
Software Mentions: 3
Published: over 3 years ago

10.3389/fpls.2019.01195

Improving and Maintaining Winter Hardiness and Frost Tolerance in Bread Wheat by Genomic Selection
Cited by: 17
Author(s): Sebastian Michel, Franziska Löschenberger, Jakob Hellinger, Verena Strasser, Christian Ametz, Bernadette Pachler, Ellen Sparry, Hermann Buerstmayr
Software Mentions: 3
Published: about 5 years ago

10.3389/fpsyt.2020.00742

Suicide Attempts Among French and Brazilian Adolescents Admitted to an Emergency Room. A Comparative Study of Risk and Protective Factors
Cited by: 0
Author(s): Natalia C. Rufino, Bojan Mirkovic, Angèle Consoli, Hugues Pellerin, Juliana Pinto Moreira Santos, Thiago M. Fidalgo, Priscille Gérardin, Dartiu Xavier da Silveira, Doron Cohen
Software Mentions: 3
Published: over 4 years ago

10.3389/fpsyg.2019.01646

Regression Analysis of ICT Impact Factors on Early Adolescents’ Reading Proficiency in Five High-Performing Countries
Cited by: 34
Author(s): Yanyan Xiao, Yang Liu, Jie Hu
Software Mentions: 3
Published: over 5 years ago

10.1093/jxb/erz524

Integrative analysis of the nuclear proteome in Pinus radiata reveals thermopriming coupled to epigenetic regulation
Cited by: 27
Author(s): Laura Lamelas, Luís Valledor, Mónica Escandón, Glória Pinto, María Jesús Cañal, Monica Meijón
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-46129-4

The AMPK system of salmonid fishes was expanded through genome duplication and is regulated by growth and immune status in muscle
Cited by: 12
Author(s): Dwight R. Causey, Jin Hyoung Kim, Robert H. Devlin, Samuel Martín, Daniel J. Macqueen
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-019-52290-7

The effect of livestock on the physiological condition of roe deer (Capreolus capreolus) is modulated by habitat quality
Cited by: 14
Author(s): Fernando Horcajada-Sánchez, Gema Escribano-Ávila, Carlos Lara‐Romero, Emílio Virgós, Isabel Barja
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-021-81279-4

A comparative study of evaluating missing value imputation methods in label-free proteomics
Cited by: 43
Author(s): Lina Jin, Yingtao Bi, Chenqi Hu, Jun Qu, Shichen Shen, Xue Wang, Yu Tian
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41393-020-0428-4

Examining the complexity of functioning in persons with spinal cord injury attending first rehabilitation in Switzerland using structural equation modelling
Cited by: 3
Author(s): Jsabel Hodel, Cristina Ehrmann, Gerold Stucki, Jerome Bickenbach, Birgit Prodinger
Software Mentions: 3
Published: almost 5 years ago

10.1007/s00122-019-03386-1

Combining grain yield, protein content and protein quality by multi-trait genomic selection in bread wheat
Cited by: 28
Author(s): Sebastian Michel, Franziska Löschenberger, Christian Ametz, Bernadette Pachler, Ellen Sparry, Hermann Buerstmayr
Software Mentions: 3
Published: over 5 years ago

10.1136/jnnp-2020-325011

Clinical features which predict neuronal surface autoantibodies in new-onset focal epilepsy: implications for immunotherapies
Cited by: 31
Author(s): Ronan N. McGinty, Adam E. Handel, Teresa C. Moloney, Archana Ramesh, Andrew Fower, Emma Torzillo, Holger Kramer, Stephen Howell, Patrick Waters, Jane Adcock, Arjune Sen, Bethan Lang, Sarosh R. Irani
Software Mentions: 3
Published: about 4 years ago

10.1186/s12986-018-0296-5

Metabolomic profiles associated with bone mineral density in US Caucasian women.
Cited by: 42
Author(s): Qi Zhao, Hui Shen, Kuan-Jui Su, Ji Gang Zhang, Qing Tian, Liang Zhao, Chuan Qiu, Zhang Qiang, Timothy J. Garrett, Jiawang Liu, Hong Wen Deng
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0199089

Feature selection for the accurate prediction of septic and cardiogenic shock ICU mortality in the acute phase
Cited by: 22
Author(s): Alexander Aushev, Vicent Ribas Ripoll, Alfredo Vellido, Federico Aletti, Bernardo Bollen Pinto, Antoine Herpain, Emiel Hendrik Post, Eduardo Romay Medina, Ricard Ferrer, Giuseppe Baselli, Karim Bendjelid
Software Mentions: 2
Published: about 6 years ago

10.3389/fpls.2017.00828

Eggplant Resistance to the Ralstonia solanacearum Species Complex Involves Both Broad-Spectrum and Strain-Specific Quantitative Trait Loci
Cited by: 47
Author(s): Sylvia Salgon, Cyril Jourda, Christopher Sauvage, Marie‐Christine Daunay, Bernard Reynaud, Emmanuel Wicker, Jacques Dintinger
Software Mentions: 2
Published: over 7 years ago

10.3390/jcm10194441

Machine Learning Consensus Clustering Approach for Hospitalized Patients with Phosphate Derangements
Cited by: 7
Author(s): Charat Thongprayoon, Carissa Dumancas, Voravech Nissaisorakarn, Mira T. Keddis, Andrea G. Kattah, Pattharawin Pattharanitima, Tananchai Petnak, Saraschandra Vallabhajosyula, Vesna D. Garovic, Michael A Mao, John Dillon, Stephen B. Erickson, Wisit Cheungpasitporn
Software Mentions: 2
Published: about 3 years ago

10.3390/genes12010114

Merging Genomics and Transcriptomics for Predicting Fusarium Head Blight Resistance in Wheat
Cited by: 7
Author(s): Sebastian Michel, Christian Wagner, Tetyana Nosenko, Barbara Steiner, Mina Samad-Zamini, Maria Buerstmayr, Klaus Mayer, Hermann Buerstmayr
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12859-019-2832-3

Optimal clustering with missing values
Cited by: 15
Author(s): Shahin Boluki, Siamak Zamani Dadaneh, Xiaoning Qian, Edward R. Dougherty
Software Mentions: 2
Published: over 5 years ago

10.1186/s13059-021-02392-1

Leveraging breeding programs and genomic data in Norway spruce (Picea abies L. Karst) for GWAS analysis
Cited by: 27
Author(s): Zhiqiang Chen, Yanjun Zan, Pascal Milesi, Linghua Zhou, Jun Chen, Lili Li, Binbin Cui, Shihui Niu, Johan Westin, Bo Karlsson, Maria Rosario García‐Gil, Martin Lascoux, Harry X. Wu
Software Mentions: 2
Published: over 3 years ago

10.3390/brainsci10110775

Relations between Sensory Responsiveness and Features of Autism in Children
Cited by: 25
Author(s): Jacob Feldman, Margaret Cassidy, Yupeng Liu, Anne V. Kirby, Mark T. Wallace, Tiffany G. Woynaroski
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-021-88172-0

Machine learning and deep learning to predict mortality in patients with spontaneous coronary artery dissection
Cited by: 29
Author(s): Chayakrit Krittanawong, Hafeez Ul Hassan Virk, Anirudh Kumar, Mehmet Aydar, Zhen Wang, Matthew Stewart, Jonathan L. Halperin
Software Mentions: 2
Published: over 3 years ago

Projects: cran: missForest

Papers Mentioning missForest 178