Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: mcmc

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/mcmc

Markov Chain Monte Carlo
16 versions
Latest release: over 4 years ago
11 dependent packages
12,499 downloads last month

Papers Mentioning mcmc 24

Bayesian evaluation of behavior change interventions: a brief introduction and a practical example
Cited by: 16
Author(s): Matti Toivo Juhani Heino, Matti Vuorre, Nelli Hankonen
Software Mentions: 6
Published: over 6 years ago

10.1186/s12898-020-00298-3

The trinity of ecological contrasts: a case study on rich insect assemblages by means of species, functional and phylogenetic diversity measures
Cited by: 6
Author(s): Elia Guariento, Patrick Strutzenberger, Christine Truxa, Konrad Fiedler
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0120928

Diversity Dynamics in Nymphalidae Butterflies: Effect of Phylogenetic Uncertainty on Diversification Rate Shift Estimates
Cited by: 11
Author(s): Carlos Peña, Marianne Espeland
Software Mentions: 3
Published: over 9 years ago

10.1371/currents.outbreaks.6f7025f1271821d4c815385b08f5f80e

Phylodynamic Analysis of Ebola Virus in the 2014 Sierra Leone Epidemic
Cited by: 38
Author(s): Erik Volz, Sergei L. Kosakovsky Pond
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0176021

Disentangling geographical, biotic, and abiotic drivers of plant diversity in neotropical Ruellia (Acanthaceae)
Cited by: 16
Author(s): Erin A. Tripp, Yi‐Hsin Erica Tsai
Software Mentions: 3
Published: over 7 years ago

10.1007/s10482-017-0855-1

Two new species of the Fusarium fujikuroi species complex isolated from the natural environment
Cited by: 34
Author(s): Tarek A. A. Moussa, Hassan S. Al-Zahrani, Naif M. S. Kadasa, Sarah Ahmed, G. S. de Hoog, Abdullah M. S. Al‐Hatmi
Software Mentions: 2
Published: over 7 years ago

10.1186/s12862-014-0210-3

The strange case of East African annual fishes: aridification correlates with diversification for a savannah aquatic group?
Cited by: 47
Author(s): Alexander Dorn, Zuzana Musilová, Matthias Platzer, Kathrin Reichwald, Alessandro Cellerino
Software Mentions: 2
Published: almost 10 years ago

10.1002/ece3.4422

Improving estimates of environmental change using multilevel regression models of Ellenberg indicator values
Cited by: 10
Author(s): Tadhg Carroll, Phillipa K. Gillingham, Richard Stafford, James M. Bullock, Anita Díaz
Software Mentions: 2
Published: about 6 years ago

10.1002/ece3.75

Sexual selection on song and cuticular hydrocarbons in two distinct populations ofDrosophila montana
Cited by: 30
Author(s): Paris Veltsos, Claude Wicker-Thomas, Roger K. Butlin, Anneli Hoikkala, Michael G. Ritchie
Software Mentions: 2
Published: almost 13 years ago

10.1186/gb-2013-14-12-r142

The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes
Cited by: 74
Author(s): Sarah D. Kocher, Li Cai, Wei Yang, Hao Tan, Soojin V. Yi, Xingyu Yang, Hopi E. Hoekstra, Guojie Zhang, Naomi E. Pierce, Douglas W. Yu
Software Mentions: 2
Published: over 11 years ago

10.1186/1471-2164-13-585

High-resolution autosomal radiation hybrid maps of the pig genome and their contribution to the genome sequence assembly
Cited by: 17
Author(s): Bertrand Servin, Thomas Faraut, Nathalie Iannuccelli, Diana Zélénika, Denis Milan
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2164-15-625

An update of the goat genome assembly using dense radiation hybrid maps allows detailed analysis of evolutionary rearrangements in Bovidae
Cited by: 16
Author(s): Xiaoyong Du, Bertrand Servin, James E. Womack, Jianhua Cao, Mei Yu, Dong Yang, Wen Wang, Shuhong Zhao
Software Mentions: 1
Published: about 10 years ago

10.1038/s41598-018-29166-3

Carbon dioxide stimulates lake primary production
Cited by: 24
Author(s): Mohammed Hamdan, Pär Byström, Erin R. Hotchkiss, Mohammed Jawad Salih Al-Haidarey, Jenny Ask, Jan Karlsson
Software Mentions: 1
Published: about 6 years ago

10.1111/eva.12170

Detecting past changes of effective population size
Cited by: 54
Author(s): Natacha Nikolic, Claude Chevalet
Software Mentions: 1
Published: over 10 years ago

10.1016/j.fawpar.2021.e00120

Occurrence and abundance of zoonotic nematodes in snapper Chrysophrys auratus, a popular table fish from Australian and New Zealand waters
Cited by: 5
Author(s): Md. Shahadat Hossen, Skye Wassens, Shokoofeh Shamsi
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2020.573670

An Endophytic Trichoderma Strain Promotes Growth of Its Hosts and Defends Against Pathogen Attack
Cited by: 37
Author(s): Yu-Heng Tseng, Hamid Rouina, Karin Groten, P. Rajani, Alexandra C. U. Furch, Michael Reichelt, Ian T. Baldwin, K. Nataraja, R. Uma Shaanker, Ralf Oelmüller
Software Mentions: 1
Published: almost 4 years ago

10.3389/fvets.2020.00369

Eimeria sciurorum (Apicomplexa, Coccidia) From the Calabrian Black Squirrel (Sciurus meridionalis): An Example of Lower Host Specificity of Eimerians
Cited by: 1
Author(s): Jana Kvičerová, Lada Hofmannová, Francesca Scognamiglio, Mario Santoro
Software Mentions: 1
Published: about 4 years ago

10.1093/genetics/iyab061

Gene body methylation is under selection in Arabidopsis thaliana
Cited by: 8
Author(s): Aline Muyle, Jeffrey Ross‐Ibarra, Danelle Seymour, Brandon S. Gaut
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms18010160

Roles of GATA6 during Gonadal Development in Japanese Flounder: Gonadogenesis, Regulation of Gender-Related Genes, Estrogen Formation and Gonadal Function Maintenance
Cited by: 1
Author(s): Zan Li, Xiumei Liu, Yan Sun, Jinxiang Liu, Yuezhong Liu, Mengxun Wang, Quanqi Zhang, Xubo Wang
Software Mentions: 1
Published: over 7 years ago

10.1111/gcb.14895

Stream metabolism controls diel patterns and evasion of CO2 in Arctic streams
Cited by: 33
Author(s): Gerard Rocher-Ros, Ryan A. Sponseller, Ann‐Kristin Bergström, Maria Myrstener, Reiner Giesler
Software Mentions: 1
Published: almost 5 years ago

10.1080/00173134.2019.1594357

Origin and divergence of Afro-Indian Picrodendraceae: linking pollen morphology, dispersal modes, fossil records, molecular dating and paleogeography
Cited by: 9
Author(s): Friðgeir Grímsson, Shirley A. Graham, Mario Coiro, Bonnie F. Jacobs, Alexandros Xafis, Frank Neumann, Louis Scott, Jakub Sakala, Ellen D. Currano, Reinhard Zetter
Software Mentions: 1
Published: over 5 years ago

10.1186/s13071-017-2070-3

Isolation and molecular characterisation of Halicephalobus gingivalis in the brain of a horse in Piedmont, Italy
Cited by: 8
Author(s): Maria Domenica Pintore, Francesco Cerutti, Antonio D’Angelo, Cristiano Corona, Paola Gazzuola, Loretta Masoero, Corrado Colombo, Roberto Bona, Carlo Cantile, Simone Peletto, Cristina Casalone, Barbara Iulini
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0031961

The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members
Cited by: 72
Author(s): Markus Sällman Almén, Nathalie Bringeland, Robert Fredriksson, Helgi B. Schiöth
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0213366

Assessing the role of transmission chains in the spread of HIV-1 among men who have sex with men in Quebec, Canada
Cited by: 5
Author(s): Luc Villandré, Aurélie Labbe, Bluma G. Brenner, Ruxandra-Ilinca Ibanescu, Michel Roger, David A. Stephens
Software Mentions: 1
Published: over 5 years ago