Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: matlab

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/matlab

'MATLAB' Emulation Package
14 versions
Latest release: over 2 years ago
30 dependent packages
2,384 downloads last month

Papers Mentioning matlab 666

10.1371/journal.pone.0038597
Modelling and Detecting Tumour Oxygenation Levels
Cited by: 11
Author(s): Anne C. Skeldon, Gary Chaffey, David J. B. Lloyd, Vineet Mohan, D.A. Bradley, Andrew Nisbet
Software Mentions: 2
Published: over 12 years ago
10.1371/journal.pone.0128833
Cortical Response Similarities Predict which Audiovisual Clips Individuals Viewed, but Are Unrelated to Clip Preference
Cited by: 8
Author(s): David A. Bridwell, Cullen Roth, Cota Navin Gupta, Vince D. Calhoun
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0152616
Predicting Missing Marker Trajectories in Human Motion Data Using Marker Intercorrelations
Cited by: 66
Author(s): Øyvind Gløersen, Peter Federolf
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0181973
Freezing during tapping tasks in patients with advanced Parkinson’s disease and freezing of gait
Cited by: 15
Author(s): Arnaud Delval, Luc Defebvre, Céline Tard
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0174386
An information-based network approach for protein classification
Cited by: 4
Author(s): Xiaogeng Wan, Xiaohui Zhao, Stephen S.-T. Yau
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0120202
Optimizing Stimulation and Analysis Protocols for Neonatal fMRI
Cited by: 18
Author(s): Rhodri Cusack, Conor Wild, Annika C. Linke, Tomoki Arichi, David S. C. Lee, V. K. M. Han
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0205219
A fully automated, faster noise rejection approach to increasing the analytical capability of chemical imaging for digital histopathology
Cited by: 5
Author(s): Soumyajit Gupta, Shachi Mittal, André Kajdacsy-Balla, Rohit Bhargava, Chandrajit L. Bajaj
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0009361
Identifying Prototypical Components in Behaviour Using Clustering Algorithms
Cited by: 58
Author(s): Elke Braun, Bart R. H. Geurten, Martin Egelhaaf
Software Mentions: 2
Published: over 14 years ago
10.1371/journal.pone.0135729
An Eye-Tracking Study of Multiple Feature Value Category Structure Learning: The Role of Unique Features
Cited by: 0
Author(s): Zhiya Liu, Xiao Song, Carol A. Seger
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0015995
“Biological Geometry Perception”: Visual Discrimination of Eccentricity Is Related to Individual Motor Preferences
Cited by: 6
Author(s): Yannick Wamain, Jessica Tallet, Pier–Giorgio Zanone, Marieke Longcamp
Software Mentions: 2
Published: almost 14 years ago
10.1371/journal.pone.0050939
Probabilistic MRI Brain Anatomical Atlases Based on 1,000 Chinese Subjects
Cited by: 21
Author(s): Xing Wang, Nan Chen, Zhentao Zuo, Rongjian Xue, Jing Luo, Yan Zhuo, Dinggang Shen, Kuncheng Li
Software Mentions: 2
Published: almost 12 years ago
10.1371/journal.pone.0022933
Simulating EGFR-ERK Signaling Control by Scaffold Proteins KSR and MP1 Reveals Differential Ligand-Sensitivity Co-Regulated by Cbl-CIN85 and Endophilin
Cited by: 10
Author(s): Lei Huang, Catherine Pan, Baowen Li, Lisa Tucker-Kellogg, Bruce Tidor, Yu Zong Chen, Boon Chuan Low
Software Mentions: 2
Published: over 13 years ago
10.1371/journal.pone.0019884
Fast, Scalable, Bayesian Spike Identification for Multi-Electrode Arrays
Cited by: 60
Author(s): Jason S. Prentice, Jan Homann, Kristina D. Simmons, Gašper Tkačik, Vijay Balasubramanian, Philip C. Nelson
Software Mentions: 2
Published: over 13 years ago
10.1371/journal.pone.0066144
Structure and Haem-Distal Site Plasticity in Methanosarcina acetivorans Protoglobin
Cited by: 18
Author(s): Alessandra Pesce, Lesley Tilleman, J. Donne, E. Aste, Paolo Ascenzi, Chiara Ciaccio, Massimo Coletta, Luc Moëns, Cristiano Viappiani, Sylvia Dewilde, Martino Bolognesi, M. Nardini
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0144846
Geniculo-Cortical Projection Diversity Revealed within the Mouse Visual Thalamus
Cited by: 1
Author(s): Marcus N. Leiwe, Aenea Hendry, Andrew Daniel Bard, Stephen J. Eglen, Andrew Lowe, Ian D. Thompson
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0227562
The dynamics of shapes of vesicle membranes with time dependent spontaneous curvature
Cited by: 6
Author(s): Rafael A. Barrio, Tomás Alarcón, A. Hernández–Machado
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0234660
A comparative study of two methods to predict the incidence of hepatitis B in Guangxi, China
Cited by: 10
Author(s): Yanling Zheng, Liping Zhang, XiXun Zhu, Gang Guo
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0051517
The Relationship between Cerebral Glucose Metabolism and Age: Report of a Large Brain PET Data Set
Cited by: 44
Author(s): X. Y. Shen, Huafeng Liu, Zhenghui Hu, Hongjie Hu, Peng Shi
Software Mentions: 2
Published: almost 12 years ago
10.1371/journal.pone.0062867
Combining Classification with fMRI-Derived Complex Network Measures for Potential Neurodiagnostics
Cited by: 40
Author(s): Tomer Fekete, Meytal Wilf, Denis Rubin, Shimon Edelman, Rafael Malach, Lilianne R. Mujica‐Parodi
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0031929
Hierarchical Information Clustering by Means of Topologically Embedded Graphs
Cited by: 96
Author(s): Won‐Min Song, Tiziana Di Matteo, Tomaso Aste
Software Mentions: 2
Published: over 12 years ago
10.1371/journal.pone.0029517
A Functional and Structural Investigation of the Human Fronto-Basal Volitional Saccade Network
Cited by: 52
Author(s): Sebastiaan F. W. Neggers, Rosanne M. van Diepen, Bram B. Zandbelt, Matthijs Vink, René C.W. Mandl, Tjerk P. Gutteling
Software Mentions: 2
Published: almost 13 years ago
10.1371/journal.pone.0108028
Computational Study on Subdural Cortical Stimulation - The Influence of the Head Geometry, Anisotropic Conductivity, and Electrode Configuration
Cited by: 19
Author(s): Donghyeon Kim, Hyeon Seo, Hyoung-Ihl Kim, Sung Chan Jun
Software Mentions: 2
Published: about 10 years ago
10.1371/journal.pone.0137728
Exploring the Altered Dynamics of Mammalian Central Carbon Metabolic Pathway in Cancer Cells: A Classical Control Theoretic Approach
Cited by: 8
Author(s): Malavika Bhattacharya, Abhijit Dasgupta, Rajat K. De
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0240953
Genome-scale reconstructions to assess metabolic phylogeny and organism clustering
Cited by: 5
Author(s): Christian Schulz, Eivind Almaas
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0163145
Non-Invasive Detection of Protein Content in Several Types of Plant Feed Materials Using a Hybrid Near Infrared Spectroscopy Model
Cited by: 12
Author(s): Fan Xia, Shichuan Tang, Guozhen Li, Xingfan Zhou
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pone.0225987
Low-rank graph optimization for multi-view dimensionality reduction
Cited by: 4
Author(s): Youcheng Qian, Xueyan Yin, Jun Kong, Wang Jian-zhong, Wei Gao
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0219833
Modeling global geometric spatial information for rotation invariant classification of satellite images
Cited by: 23
Author(s): Nouman Ali, Bushra Zafar, Muhammad Kashif Iqbal, Muhammad Sajid, Muhammad Yamin Younis, Saadat Hanif Dar, Muhammad Tariq Mahmood, Ik Hyun Lee
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0121795
Statistical Detection of EEG Synchrony Using Empirical Bayesian Inference
Cited by: 2
Author(s): Archana Singh, Hideki Asoh, Yuji Takeda, Steven Phillips
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0181446
Validation of functional calibration and strap-down joint drift correction for computing 3D joint angles of knee, hip, and trunk in alpine skiing
Cited by: 47
Author(s): Benedikt Fasel, Jörg Spörri, Pascal Schütz, Silvio Lorenzetti, Kamiar Aminian
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0151839
Model Construction and Analysis of Respiration in Halobacterium salinarum
Cited by: 4
Author(s): Cherryl O. Talaue, Ricardo C.H. del Rosario, Friedhelm Pfeiffer, Eduardo Mendoza, Dieter Oesterhelt
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0091844
Mathematical Modeling of Interleukin-27 Induction of Anti-Tumor T Cells Response
Cited by: 40
Author(s): Kang‐Ling Liao, Xue‐Feng Bai, Avner Friedman
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0197420
pTRA – A reporter system for monitoring the intracellular dynamics of gene expression
Cited by: 1
Author(s): Sabine Gabriele Wagner, Martin Ziegler, Hannes Löwe, Andreas Kremling, Katharina Pflüger‐Grau
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0161653
Topology Universality and Dissimilarity in a Class of Scale-Free Networks
Cited by: 1
Author(s): Lanhua Zhang, Juan Chen, Mei Wang, Yujuan Li, Shao‐Wei Xue, Yi‐Yuan Tang, Baoliang Sun
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pone.0189411
Optimized maritime emergency resource allocation under dynamic demand
Cited by: 8
Author(s): Wenfen Zhang, Xinping Yan, Jiaqi Yang
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0048722
Dynamic Proteomics of Human Protein Level and Localization across the Cell Cycle
Cited by: 16
Author(s): Shlomit Farkash-Amar, Eran Eden, Ariel Cohen, Naama Geva‐Zatorsky, Lydia Cohen, Ron Milo, Alex Sigal, Tamar Danon, Uri Alon
Software Mentions: 2
Published: about 12 years ago
10.1371/journal.pone.0222388
Biomechanical effects of rocker shoes on plantar aponeurosis strain in patients with plantar fasciitis and healthy controls
Cited by: 9
Author(s): Christian Greve, Dorianne Schuitema, Bert Otten, Laurens van Kouwenhove, Erik Verhaar, Klaas Postema, Rienk Dekker, Juha M. Hijmans
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0178080
Forces applied during classical touch assays for Caenorhabditis elegans
Cited by: 11
Author(s): Adam L. Nekimken, Eileen A. Mazzochette, Miriam B. Goodman, Beth L. Pruitt
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0135712
Influence of the Lower Jaw Position on the Running Pattern
Cited by: 32
Author(s): Christian Maurer, Felix Stief, Alexander Jonas, Andrej Kovac, David A. Groneberg, Andrea Meurer, Daniela Ohlendorf
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0226768
A study on separation of the protein structural types in amino acid sequence feature spaces
Cited by: 4
Author(s): Xiaogeng Wan, Xiao Tan
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0017258
The Impact of Multifunctional Genes on "Guilt by Association" Analysis
Cited by: 172
Author(s): Jesse Gillis, Paul Pavlidis
Software Mentions: 2
Published: almost 14 years ago
10.1371/journal.pone.0180268
The successive projection algorithm as an initialization method for brain tumor segmentation using non-negative matrix factorization
Cited by: 10
Author(s): Nicolas Sauwen, Marjan Acou, H. N. Bharath, Diana M. Sima, Jelle Veraart, Frederik Maes, Uwe Himmelreich, Eric Achten, Sabine Van Huffel
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0130086
FctClus: A Fast Clustering Algorithm for Heterogeneous Information Networks
Cited by: 4
Author(s): Jing Yang, Limin Chen, Jianpei Zhang
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0096469
A New Genetically Encoded Single-Chain Biosensor for Cdc42 Based on FRET, Useful for Live-Cell Imaging
Cited by: 43
Author(s): Samer Hanna, Veronika Miskolci, Dianne Cox, Louis Hodgson
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0127905
Mathematical Modeling of the Dynamics of Shoot-Root Interactions and Resource Partitioning in Plant Growth
Cited by: 30
Author(s): Chrystel Feller, Patrick Favre, Aleš Janka, Samuel C. Zeeman, Jean-Pierre Gabriel, Didier Reinhardt
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0213188
Small GTPase patterning: How to stabilise cluster coexistence
Cited by: 13
Author(s): Bas Jacobs, Jaap Molenaar, Eva E. Deinum
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0208758
Influence of ergonomic layout of musician chairs on posture and seat pressure in musicians of different playing levels
Cited by: 5
Author(s): Daniela Ohlendorf, Christian Maurer, Elisabeth Bolender, Veronica Kocis, Martha Song, David A. Groneberg
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0188557
High visual acuity revealed in dogs
Cited by: 10
Author(s): Olle Lind, Ida Milton, Ellen Andersson, Per Jensen, Lina S. V. Roth
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0040174
Imaging the Spatio-Temporal Dynamics of Supragranular Activity in the Rat Somatosensory Cortex in Response to Stimulation of the Paws
Cited by: 27
Author(s): M. L. Morales-Botello, Juan Aguilar, Guglielmo Foffani
Software Mentions: 2
Published: over 12 years ago
10.1371/journal.pone.0123424
Melanopsin-Derived Visual Responses under Light Adapted Conditions in the Mouse dLGN
Cited by: 31
Author(s): Kyle Davis, Cyril G. Eleftheriou, Annette E. Allen, Christopher A. Procyk, Robert J. Lucas
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0111612
Functional Aspects of the EGF-Induced MAP Kinase Cascade: A Complex Self-Organizing System Approach
Cited by: 2
Author(s): Efstratios K. Kosmidis, Moschou Vasiliki, Ziogas Georgios, Ioannis Boukovinas, Maria Albani, Nikolaos A. Laskaris
Software Mentions: 2
Published: about 10 years ago
10.1371/journal.pone.0110126
Mathematical Modeling of Interleukin-35 Promoting Tumor Growth and Angiogenesis
Cited by: 36
Author(s): Kang‐Ling Liao, Xue‐Feng Bai, Avner Friedman
Software Mentions: 2
Published: about 10 years ago
10.1371/journal.pone.0197666
Prediction of daily PM2.5 concentration in China using partial differential equations
Cited by: 13
Author(s): Yufang Wang, Haiyan Wang, Shuhua Chang, Adrian Avram
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0141199
Exemplar-Based Image Inpainting Using a Modified Priority Definition
Cited by: 29
Author(s): Liang-Jian Deng, Ting-Zhu Huang, Xi-Le Zhao
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0220412
Mass Isotopologue Distribution of dimer ion adducts of intracellular metabolites for potential applications in 13C Metabolic Flux Analysis
Cited by: 9
Author(s): Charulata B. Prasannan, Vivek Mishra, Damini Jaiswal, Pramod P. Wangikar
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0106753
Orientation-Cue Invariant Population Responses to Contrast-Modulated and Phase-Reversed Contour Stimuli in Macaque V1 and V2
Cited by: 18
Author(s): Xu An, Haimei Gong, Jiapeng Yin, Xiaochun Wang, Ying Pan, Xian Zhang, Ying Lu, Yupeng Yang, Zoltán Tóth, Ingo Schießl, Niall McLoughlin, Wei Wang
Software Mentions: 2
Published: about 10 years ago
10.1111/cpr.12723
Long non‐coding RNA ZEB1‐AS1 promotes colon adenocarcinoma malignant progression via miR‐455‐3p/PAK2 axis
Cited by: 61
Author(s): Xin Ni, Yuting Ding, Haitao Yuan, Jinmin Shao, Yan Yan, Rouyu Guo, Wenkang Luan, Min Xu
Software Mentions: 2
Published: almost 5 years ago
10.1186/1752-153X-2-20
A user-friendly Matlab program and GUI for the pseudorotation analysis of saturated five-membered ring systems based on scalar coupling constants
Cited by: 29
Author(s): Pieter Hendrickx, José Martins
Software Mentions: 2
Published: about 16 years ago
10.1002/chem.201404879
“Invisible” Conformers of an Antifungal Disulfide Protein Revealed by Constrained Cold and Heat Unfolding, CEST-NMR Experiments, and Molecular Dynamics Calculations
Cited by: 41
Author(s): Ádám Fizil, Zoltán Gáspári, T. Barna, Florentine Marx, Gyula Batta
Software Mentions: 2
Published: almost 10 years ago
10.1155/2011/747290
BrainNetVis: An Open-Access Tool to Effectively Quantify and Visualize Brain Networks
Cited by: 3
Author(s): Eleni G. Christodoulou, Vangelis Sakkalis, Vassilis Tsiaras, Ioannis G. Tollis
Software Mentions: 2
Published: almost 14 years ago
10.1155/2014/673415
Performance Optimization of Force Feedback Control System in Virtual Vascular Intervention Surgery
Cited by: 2
Author(s): Zhi Hu, Ping Cai, Peng Qin, Le Xie
Software Mentions: 2
Published: almost 11 years ago
10.1155/2020/7359375
Texture Feature-Based Classification on Transrectal Ultrasound Image for Prostatic Cancer Detection
Cited by: 8
Author(s): Xiaofu Huang, Ming Chen, Peizhong Liu, Yongzhao Du
Software Mentions: 2
Published: about 4 years ago
10.1155/2020/7595174
A Global Inhomogeneous Intensity Clustering- (GINC-) Based Active Contour Model for Image Segmentation and Bias Correction
Cited by: 6
Author(s): Chaolu Feng, Jinzhu Yang, Chunhui Lou, Wei Li, Kun Yu, Dazhe Zhao
Software Mentions: 2
Published: over 4 years ago
10.1155/2018/8145713
Skin Disease Recognition Method Based on Image Color and Texture Features
Cited by: 65
Author(s): Lisheng Wei, Quan Gan, Tao Ji
Software Mentions: 2
Published: about 6 years ago
10.1016/j.dib.2019.103756
Data on near infrared polarization spectroscopy measurements to evaluate the potential of the Mueller matrix elements in characterization of turbid liquid samples
Cited by: 3
Author(s): A. Ducanchez, Daphné Héran, Ryad Bendoula
Software Mentions: 2
Published: over 5 years ago
10.1016/j.dib.2018.09.083
Dataset of vibrational and acoustic measurements for squeal analysis from the laboratory brake setup Friction-Induced Vibration and noisE at Ecole Centrale de Lyon (FIVE@ECL)
Cited by: 5
Author(s): Jean-Jacques Sinou, D. Lenoir, Sébastien Besset, F Gillot
Software Mentions: 2
Published: almost 6 years ago
10.1016/j.dib.2016.06.031
Real-world datasets for portfolio selection and solutions of some stochastic dominance portfolio models
Cited by: 29
Author(s): Renato Bruni, Francesco Cesarone, Andrea Scozzari, Fabio Tardella
Software Mentions: 2
Published: about 8 years ago