Projects: cran: mashr
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/mashr
Multivariate Adaptive Shrinkage
6 versions
Latest release: almost 2 years ago
1 dependent package
477 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Stephens lab (organization)
Research in statistical and computational methods for genetics at the University of Chicago. Academic
Research in statistical and computational methods for genetics at the University of Chicago. Academic
README Analysis:
DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+60
Educational commit emails
3 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+10
Educational website
Repository owner has educational domain website -
+10
Science terms in README
5 scientific terms found in README -
+10
DOI references
1 DOI references found in README
Penalties:
-
-15
No science keywords
No scientific terms found in keywords/classifiers -
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (100)
Papers Mentioning mashr 6
10.1371/journal.pgen.1009213
Gene regulatory effects of a large chromosomal inversion in highland maizeCited by: 38
Author(s): Taylor M. Crow, James Ta, Saghi Nojoomi, M. Rocío Aguilar-Rangel, Jorge Vladimir Torres Rodríguez, David M. Gates, Rubén Rellán‐Álvarez, Ruairidh J. H. Sawers, Daniel E. Runcie
Software Mentions: 5
Published: over 4 years ago
10.1002/gepi.22346
Fine‐mapping and QTL tissue‐sharing information improves the reliability of causal gene identificationCited by: 25
Author(s): Alvaro N. Barbeira, Owen Melia, Yanyu Liang, Rodrigo Bonazzola, Gao Wang, Heather E. Wheeler, François Aguet, Kristin Ardlie, Xiaoquan Wen, Hae Kyung Im
Software Mentions: 4
Published: almost 5 years ago
10.1038/s41598-020-80145-z
Sex-specific differences in peripheral blood leukocyte transcriptional response to LPS are enriched for HLA region and X chromosome genesCited by: 10
Author(s): Michelle M. Stein, Mitchell Conery, Kevin M. Magnaye, Selene M. Clay, Christine Billstrand, Raluca Nicolae, Katherine A. Naughton, Carole Ober, Emma E. Thompson
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.pone.0236209
Multi-ethnic transcriptome-wide association study of prostate cancerCited by: 13
Author(s): Peter N. Fiorica, Ryan Schubert, Jonathan Morris, Mohammed Abdul Sami, Heather E. Wheeler
Software Mentions: 3
Published: almost 5 years ago
10.1186/s13073-020-00759-w
Cytokine-induced molecular responses in airway smooth muscle cells inform genome-wide association studies of asthmaCited by: 14
Author(s): Emma E. Thompson, Quynh Dang, Blair Mitchell-Handley, Kavitha Rajendran, Sumati Ram-Mohan, Julian Solway, Carole Ober, Ramaswamy Krishnan
Software Mentions: 2
Published: about 5 years ago
10.1016/j.jcmgh.2021.02.003
Genetic Effects on Transcriptome Profiles in Colon Epithelium Provide Functional Insights for Genetic Risk LociCited by: 16
Author(s): Virginia Díez-Obrero, Christopher H. Dampier, Ferrán Moratalla-Navarro, Matthew Devall, Sarah J. Plummer, Anna Díez-Villanueva, Ulrike Peters, Stephanie A. Bien, Jeroen R. Huyghe, Anshul Kundaje, Gemma Ibáñez‐Sanz, Elisabet Guinó, Mireia Obón-Santacana, Robert Carreras‐Torres, Graham Casey, Vı́ctor Moreno
Software Mentions: 1
Published: over 4 years ago