cran: marmap | Projects | Ecosyste.ms: Papers

10.1038/s41598-021-89066-x

Lagged recovery of fish spatial distributions following a cold-water perturbation
Cited by: 3
Author(s): Masumi Robertson, Gao Jin, Paul M. Regular, M. J. Morgan, Fan Zhang
Software Mentions: 12
Published: over 3 years ago

10.1038/s41598-021-84545-7

Quantitative molecular detection of larval Atlantic herring (Clupea harengus) in stomach contents of Atlantic mackerel (Scomber scombrus) marks regions of predation pressure
Cited by: 11
Author(s): Bridie J. M. Allan, Jessica L. Ray, Maik Tiedemann, Valeriya Komyakova, Frode Vikebø, Katrine Sandnes Skaar, Martina Stiasny, Arild Folkvord, Richard Nash, Erling Kåre Stenevik, Olav Sigurd Kjesbu
Software Mentions: 10
Published: over 3 years ago

10.1038/s41598-020-73579-y

Environmental influences on foraging effort, success and efficiency in female Australian fur seals
Cited by: 12
Author(s): Cassie N. Speakman, Andrew J. Hoskins, Mark A. Hindell, Daniel P. Costa, Jason R. Hartog, Alistair J. Hobday, John P. Y. Arnould
Software Mentions: 8
Published: about 4 years ago

10.3389/fmicb.2018.02528

Bacterial Diversity and the Geochemical Landscape in the Southwestern Gulf of Mexico
Cited by: 32
Author(s): Elizabeth Ernestina Godoy-Lozano, Alejandra Escobar‐Zepeda, Luciana Raggi, Enrique Merino, Rosa Marı́a Gutiérrez-Rı́os, Katy Juarez, Lorenzo Segovia, Alexei F. Licea-Navarro, Adolfo Gracía, Alejandro Sánchez-Flores, Liliana Pardo-López
Software Mentions: 7
Published: about 6 years ago

10.1111/eva.12922

Resolving fine‐scale population structure and fishery exploitation using sequenced microsatellites in a northern fish
Cited by: 30
Author(s): Kara K S Layton, Brian Dempson, Paul V. R. Snelgrove, Steven J. Duffy, Amber Messmer, Ian G. Paterson, Nicholas W. Jeffery, Tony Kess, John B. Horne, Sarah J. Salisbury, Daniel E. Ruzzante, Paul Bentzen, David Côté, Cameron M. Nugent, Moira M. Ferguson, Jong S. Leong, Ben F. Koop, Ian Bradbury
Software Mentions: 7
Published: almost 5 years ago

10.1002/ece3.6802

Concordant geographic and genetic structure revealed by genotyping‐by‐sequencing in a New Zealand marine isopod
Cited by: 7
Author(s): William S. Pearman, Sarah J. Wells, Olin K. Silander, Nikki E. Freed, James Dale
Software Mentions: 7
Published: almost 4 years ago

10.1111/eva.12676

Genomic signatures of environmental selection despite near‐panmixia in summer flounder
Cited by: 32
Author(s): Jennifer A. Hoey, Malin L. Pinsky
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0148016

Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria
Cited by: 99
Author(s): Christina Bienhold, Lucie Zinger, Antje Boetius, Alban Ramette
Software Mentions: 6
Published: almost 9 years ago

10.1038/s41598-021-97227-1

Detecting anchored fish aggregating devices (AFADs) and estimating use patterns from vessel tracking data in small-scale fisheries
Cited by: 6
Author(s): Ahmad Catur Widyatmoko, Britta Denise Hardesty, Chris Wilcox
Software Mentions: 5
Published: about 3 years ago

10.1186/s12864-017-3660-3

Highly localized divergence within supergenes in Atlantic cod (Gadus morhua) within the Gulf of Maine
Cited by: 37
Author(s): Bryan T. Barney, Christiane Munkholm, David R. Walt, Stephen R. Palumbi
Software Mentions: 5
Published: over 7 years ago

10.7717/peerj.2387

Functional, size and taxonomic diversity of fish along a depth gradient in the deep sea
Cited by: 33
Author(s): Beth L. Mindel, Francis Neat, Clive N. Trueman, Thomas J. Webb, Julia L. Blanchard
Software Mentions: 5
Published: about 8 years ago

10.1038/srep28730

Dispersal similarly shapes both population genetics and community patterns in the marine realm
Cited by: 41
Author(s): Guillem Chust, Ernesto Villarino, Anne Chenuil, Xabier Irigoien, Nihayet Bizsel, Antonio Bode, Cecilie Broms, S. Claus, María Luz Fernández de Puelles, S. Fonda-Umani, Galice Hoarau, Maria Grazia Mazzocchi, Patricija Mozetič, L. Vandepitte, Helena Veríssimo, Soultana Zervoudaki, Ángel Borja
Software Mentions: 5
Published: over 8 years ago

10.1038/s41598-018-30157-7

Multi-marker metabarcoding approach to study mesozooplankton at basin scale
Cited by: 72
Author(s): Sérgio Stefanni, D Stanković, Diego Borme, Alessandra de Olazabal, Tea Juretić, Alberto Pallavicini, Valentina Tirelli
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-019-40311-4

Plastics in sea surface waters around the Antarctic Peninsula
Cited by: 187
Author(s): Ana Luzia Lacerda, Lucas dos Santos Rodrigues, Erik van Sebille, Fábio Lameiro Rodrigues, Lourenço Ribeiro, Eduardo R. Secchi, Felipe Kessler, Maíra Carneiro Proietti
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0073051

marmap: A Package for Importing, Plotting and Analyzing Bathymetric and Topographic Data in R
Cited by: 387
Author(s): Eric Pante, Benoît Simon-Bouhet
Software Mentions: 5
Published: about 11 years ago

10.1371/journal.pone.0165252

Environmental DNA from Seawater Samples Correlate with Trawl Catches of Subarctic, Deepwater Fishes
Cited by: 250
Author(s): Philip Francis Thomsen, Peter Rask Møller, Eva Egelyng Sigsgaard, Steen Wilhelm Knudsen, Ole A Jørgensen, Eske Willerslev
Software Mentions: 5
Published: about 8 years ago

10.1038/s41598-021-96992-3

Dynamic prokaryotic communities in the dark western Mediterranean Sea
Cited by: 3
Author(s): Catalina Mena, Rosa Balbín, Patricia Reglero, Melissa Martín, Rocío Santiago, Eva Sintes
Software Mentions: 4
Published: about 3 years ago

10.1002/ece3.3797

Sea ice meiofauna distribution on local to pan‐Arctic scales
Cited by: 24
Author(s): Bodil A. Bluhm, Haakon Hop, Mikko Vihtakari, Rolf Gradinger, Katrin Iken, I. A. Melnikov, Janne E. Søreide
Software Mentions: 4
Published: almost 7 years ago

10.1038/s41598-020-69564-0

Evidence for long-term seamount-induced chlorophyll enhancements
Cited by: 21
Author(s): Astrid B. Leitner, Anna B. Neuheimer, Jeffrey C. Drazen
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-021-84532-y

18S rRNA gene sequences of leptocephalus gut contents, particulate organic matter, and biological oceanographic conditions in the western North Pacific
Cited by: 4
Author(s): Tsuyoshi Watanabe, Satoshi Nagai, Yoko Kawakami, Taiga Asakura, Jun Kikuchi, Nobuharu Inaba, Yukiko Taniuchi, Hiroaki Kurogi, Seinen Chow, Tsutomu Tomoda, Daisuke Ambe, Daisuke Hasegawa
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-018-30099-0

Spinal arthritis in cane toads across the Australian landscape
Cited by: 3
Author(s): Deborah S. Bower, Kiyomi Yasumiba, Daryl R. Trumbo, Ross A. Alford, Lin Schwarzkopf
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.2872

RAD sequencing reveals genomewide divergence between independent invasions of the European green crab (Carcinus maenas) in the Northwest Atlantic
Cited by: 40
Author(s): Nicholas W. Jeffery, Claudio DiBacco, Mallory Van Wyngaarden, Lorraine C. Hamilton, Ryan R. E. Stanley, Renée Bernier, Jennifer Fitzgerald, Kyle Matheson, Cynthia H. McKenzie, Praveen Nadukkalam Ravindran, Robert G. Beiko, Ian Bradbury
Software Mentions: 3
Published: over 7 years ago

10.1186/s12864-020-07084-x

Fine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysis
Cited by: 12
Author(s): Nga Thi Thu Vu, Kyall R. Zenger, Jarrod L. Guppy, Melony J. Sellars, Catarina N. S. Silva, Shannon R. Kjeldsen, Dean R. Jerry
Software Mentions: 3
Published: about 4 years ago

10.1186/s40462-021-00251-z

Interspecific and intraspecific foraging differentiation of neighbouring tropical seabirds
Cited by: 3
Author(s): Richard Austin, Federico De Pascalis, Stephen C. Votier, Jane Haakonsson, John P. Y. Arnould, Gina Ebanks‐Petrie, Jason Newton, Jessica C. Harvey, Jonathan A. Green
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0100195

VMSbase: An R-Package for VMS and Logbook Data Management and Analysis in Fisheries Ecology
Cited by: 73
Author(s): Tommaso Russo, Lorenzo D’Andrea, Antonio Parisi, Stefano Cataudella
Software Mentions: 3
Published: over 10 years ago

10.1038/s42003-021-02415-4

Complex population structure of the Atlantic puffin revealed by whole genome analyses
Cited by: 10
Author(s): Oliver Kersten, Bastiaan Star, Deborah M. Leigh, Tycho Anker‐Nilssen, Hallvard Strøm, Jóhannis Danielsen, Sébastien Descamps, Kjell Einar Erikstad, Michelle G. Fitzsimmons, Jérôme Fort, Erpur Snær Hansen, Mike Harris, Martin Irestedt, Oddmund Kleven, Mark L. Mallory, Kjetill S. Jakobsen, Sanne Boessenkool
Software Mentions: 3
Published: over 3 years ago

10.1038/s41437-020-0344-6

Oceanographic features and limited dispersal shape the population genetic structure of the vase sponge Ircinia campana in the Greater Caribbean
Cited by: 7
Author(s): Sarah M. Griffiths, Mark J. Butler, Donald C. Behringer, Thierry Pérez, Richard F. Preziosi
Software Mentions: 3
Published: over 4 years ago

10.1038/srep09044

Growth of a deep-water, predatory fish is influenced by the productivity of a boundary current system
Cited by: 17
Author(s): Hải Thủy Nguyễn, Adam N. Rountrey, Jessica J. Meeuwig, Peter G. Coulson, Ming Feng, Stephen J. Newman, Anya M. Waite, Corey B. Wakefield, Mark G. Meekan
Software Mentions: 3
Published: over 9 years ago

10.1098/rsos.171394

Range-wide parallel climate-associated genomic clines in Atlantic salmon
Cited by: 34
Author(s): Nicholas W. Jeffery, Ryan R. E. Stanley, Brendan F. Wringe, Javier Guijarro-Sabaniel, Vincent Bourret, Louis Bernatchez, Paul Bentzen, Robert G. Beiko, John Gilbey, Marie Clément, Ian Bradbury
Software Mentions: 2
Published: about 7 years ago

10.1111/eva.12923

Multiple decades of stocking has resulted in limited hatchery introgression in wild brook trout (Salvelinus fontinalis) populations of Nova Scotia
Cited by: 12
Author(s): Sarah J. Lehnert, Shauna M. Baillie, John L. MacMillan, Ian G. Paterson, Colin F. Buhariwalla, Ian Bradbury, Paul Bentzen
Software Mentions: 2
Published: almost 5 years ago

10.1111/eva.12601

Genomewide evidence of environmentally mediated secondary contact of European green crab (Carcinus maenas) lineages in eastern North America
Cited by: 21
Author(s): Nicholas W. Jeffery, Ian Bradbury, Ryan R. E. Stanley, Brendan F. Wringe, Mallory Van Wyngaarden, J. Ben Lowen, Cynthia H. McKenzie, Kyle Matheson, Philip S. Sargent, Claudio DiBacco
Software Mentions: 2
Published: over 6 years ago

10.1186/s12862-020-01658-9

Seascape genomics reveals population isolation in the reef-building honeycomb worm, Sabellaria alveolata (L.)
Cited by: 1
Author(s): Anna P. Muir, Stanislas F. Dubois, Rebecca E. Ross, Louise B. Firth, Antony M. Knights, Fernando P. Lima, Rui Seabra, Erwan Corre, Gildas Le Corguillé, Flávia L. D. Nunes
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0116916

Crossing Latitudes—Long-Distance Tracking of an Apex Predator
Cited by: 45
Author(s): Luciana C. Ferreira, Michele Thums, Jessica J. Meeuwig, Gabriel M. S. Vianna, John D. Stevens, Rory McAuley, Mark G. Meekan
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0217628

Macroscale abundance patterns of hydromedusae in the temperate Southwestern Atlantic (27°–56° S)
Cited by: 10
Author(s): M. Sofía Dutto, Carlo Javier Chazarreta, Claudia Rodríguez, Agustín Schiariti, Luciana Mabel Díaz Briz, Gabriel N. Genzano
Software Mentions: 2
Published: over 5 years ago

10.3390/toxins12020134

Toxicity Characterisation of Gambierdiscus Species from the Canary Islands
Cited by: 29
Author(s): Araceli E. Rossignoli, Àngels Tudó, Isabel Bravo, Patricio A. Díaz, Jorge Diogène, Pilar Riobó
Software Mentions: 2
Published: over 4 years ago

10.1002/ece3.7400

Regional movements of satellite‐tagged whale sharks Rhincodon typus in the Gulf of Aden
Cited by: 1
Author(s): Samantha Andrzejaczek, Michel Vély, Daniel Jouannet, David Rowat, Sabrina Fossette
Software Mentions: 1
Published: over 3 years ago

10.3390/genes12020303

Waves Out of the Korean Peninsula and Inter- and Intra-Species Replacements in Freshwater Fishes in Japan
Cited by: 8
Author(s): Shoji Taniguchi, Johanna Bertl, Andreas Futschik, Hirohisa Kishino, Toshio Okazaki
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0141060

Deterministic Factors Overwhelm Stochastic Environmental Fluctuations as Drivers of Jellyfish Outbreaks
Cited by: 23
Author(s): Lisandro Benedetti‐Cecchi, Antonio Canepa, Verónica Fuentes, Laura Tamburello, Jennifer E. Purcell, Stefano Piraino, Jason J. Roberts, Ferdinando Boero, Patrick N. Halpin
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0178044

Incorporating public priorities in the Ocean Health Index: Canada as a case study
Cited by: 17
Author(s): Rémi M. Daigle, Philippe Archambault, Benjamin S. Halpern, Julia S. Stewart Lowndes, Isabelle M. Côté
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-58501-w

Quantifying the Effect of Anthropogenic Climate Change on Calcifying Plankton
Cited by: 34
Author(s): L.R. Fox, Stephen Stukins, Tom Hill, C. Giles Miller
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-66876-z

Spatiotemporal distribution patterns of immature Australasian white sharks (Carcharodon carcharias)
Cited by: 36
Author(s): Julia L. Y. Spaet, Toby A. Patterson, R. Bradford, Paul A. Butcher
Software Mentions: 1
Published: over 4 years ago

10.1007/s10661-020-08704-5

The MINOUWApp: a web-based tool in support of by-catch and discards management
Cited by: 2
Author(s): Lorenzo D’Andrea, Aida Campos, Karim Erzini, Paulo Fonseca, Simone Franceschini, Stefanos Kavadas, Iridia Maina, Francesc Maynou, Tommaso Russo
Software Mentions: 1
Published: about 4 years ago

Projects: cran: marmap

Papers Mentioning marmap 42