Projects: cran: lfmm
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/lfmm
Latent Factor Mixed Models
2 versions
Latest release: about 4 years ago
237 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Mathematical and Computational Biology Research Group (organization)
Team of Mathematical and Computational Biology at Univ Grenoble Alpes (France). Academic
Team of Mathematical and Computational Biology at Univ Grenoble Alpes (France). Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+6
Science terms in README
3 scientific terms found in README
Penalties:
-
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning lfmm 9
10.3389/fgene.2019.01221
Increased Adaptive Variation Despite Reduced Overall Genetic Diversity in a Rapidly Adapting InvaderCited by: 39
Author(s): D. Selechnik, Mark F. Richardson, Richard Shine, Jayna L. DeVore, Simon Ducatez, Lee A. Rollins
Software Mentions: 8
Published: over 5 years ago
10.1002/ece3.5249
Immune and environment‐driven gene expression during invasion: An eco‐immunological application of RNA‐SeqCited by: 15
Author(s): D. Selechnik, Mark F. Richardson, Richard Shine, Gregory P. Brown, Lee A. Rollins
Software Mentions: 8
Published: about 6 years ago
10.1111/eva.13248
Genomic data support management of anadromous Arctic Char fisheries in Nunavik by highlighting neutral and putatively adaptive genetic variationCited by: 11
Author(s): Xavier Dallaire, Éric Normandeau, Julien Mainguy, Jean‐Éric Tremblay, Louis Bernatchez, Jean‐Sébastien Moore
Software Mentions: 7
Published: about 4 years ago
10.1186/s12864-020-07015-w
Tracing key genes associated with the Pinctada margaritifera albino phenotype from juvenile to cultured pearl harvest stages using multiple whole transcriptome sequencingCited by: 5
Author(s): Pauline Auffret, Jérémy Le Luyer, Manaarii Sham Koua, Virgile Quillien, Chin‐Long Ky
Software Mentions: 6
Published: almost 5 years ago
10.1111/1755-0998.12694
An integrated framework to identify wildlife populations under threat from climate changeCited by: 64
Author(s): Orly Razgour, John B. Taggart, Stéphanie Manel, Javier Juste, Carlos Ibáñez, Hugo Rebelo, Antton Alberdi, Gareth Jones, Kirsty Park
Software Mentions: 5
Published: about 8 years ago
10.1186/s12870-020-02757-x
Differential gene expression reveals mechanisms related to habitat divergence between hybridizing orchids from the Neotropical coastal plainsCited by: 5
Author(s): Bárbara Simões Santos Leal, Marcelo Mendes Brandão, Clarisse Palma‐Silva, Fábio Pinheiro
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.pgen.1005361
A Genome Scan for Genes Underlying Microgeographic-Scale Local Adaptation in a Wild Arabidopsis SpeciesCited by: 54
Author(s): Susumu Kubota, Takaya Iwasaki, Kousuke Hanada, Atsushi J. Nagano, Asao Fujiyama, Atsushi Toyoda, Sumio Sugano, Yutaka Suzuki, Kouki Hikosaka, Motomi Itô, Shin Ichi Morinaga
Software Mentions: 3
Published: about 10 years ago
10.1111/mec.15009
Genetic association with high‐resolution climate data reveals selection footprints in the genomes of barley landraces across the Iberian PeninsulaCited by: 19
Author(s): Bruno Contreras‐Moreira, Roberto Serrano‐Notivoli, Naheif E. Mohammed, Carlos Pérez Cantalapiedra, Santiago Beguerı́a, Ana M. Casas, Ernesto Igartua
Software Mentions: 3
Published: over 6 years ago
10.1534/g3.117.041228
Genomic Comparison of Indigenous African and Northern European Chickens Reveals Putative Mechanisms of Stress Tolerance Related to Environmental Selection PressureCited by: 28
Author(s): Damarius S. Fleming, Steffen Weigend, Henner Simianer, Annett Weigend, Max F. Rothschild, Carl J. Schmidt, C. M. Ashwell, Michael E. Persia, James M. Reecy, Susan J. Lamont
Software Mentions: 2
Published: about 8 years ago