cran: lars | Projects | Ecosyste.ms: Papers

10.1017/S0950268821000091

How to improve infectious disease prediction by integrating environmental data: an application of a novel ensemble analysis strategy to predict HFMD
Cited by: 1
Author(s): Junwen Tao, Yue Ma, Xuefei Zhuang, Qiang Lv, Yaqiong Liu, Tao Zhang, Fei Yin
Software Mentions: 10
Published: almost 4 years ago

10.1371/journal.pcbi.1006369

SILGGM: An extensive R package for efficient statistical inference in large-scale gene networks
Cited by: 35
Author(s): Rong Zhang, Zhao Ren, Wei Chen
Software Mentions: 10
Published: over 6 years ago

10.1371/journal.pbio.1000343

Binding Site Turnover Produces Pervasive Quantitative Changes in Transcription Factor Binding between Closely Related Drosophila Species
Cited by: 190
Author(s): Robert K. Bradley, Xiaoyong Li, Cole Trapnell, Stuart M. Davidson, Lior Pachter, Hou Cheng Chu, Leath A. Tonkin, Mark D. Biggin, Michael B. Eisen
Software Mentions: 8
Published: over 14 years ago

10.3389/fonc.2021.729340

Tumor Mutation Burden-Associated LINC00638/miR-4732-3p/ULBP1 Axis Promotes Immune Escape via PD-L1 in Hepatocellular Carcinoma
Cited by: 15
Author(s): Qi Feng, Xiaojing Du, Zhiying Zhao, Ding Zhang, Mengli Huang, Yuezong Bai, Biwei Yang, Wenxing Qin, Jinglin Xia
Software Mentions: 7
Published: about 3 years ago

10.1186/1476-069X-12-85

Statistical strategies for constructing health risk models with multiple pollutants and their interactions: possible choices and comparisons
Cited by: 112
Author(s): Zhichao Sun, Yuansheng Tao, Shi Li, Kelly K. Ferguson, John D. Meeker, Sung Kyun Park, Stuart Batterman, Bhramar Mukherjee
Software Mentions: 7
Published: about 11 years ago

10.7150/jca.43805

Survival Risk Prediction Models of Gliomas Based on IDH and 1p/19q
Cited by: 4
Author(s): Han Zou, L. Chang, Siyi Wanggou, Xuejun Li
Software Mentions: 7
Published: almost 5 years ago

10.7554/eLife.11215

Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells
Cited by: 35
Author(s): João D. Dias, Tiago Rito, Elena Torlai Triglia, Alexander Kukalev, Carmelo Ferrai, Mita Chotalia, Emily Brookes, Hiroshi Kimurâ, Ana Pombo
Software Mentions: 7
Published: almost 9 years ago

10.1038/s41598-019-54519-x

TSLRF: Two-Stage Algorithm Based on Least Angle Regression and Random Forest in genome-wide association studies
Cited by: 4
Author(s): Jiali Sun, Qingtai Wu, Dafeng Shen, Yang Wen, Fengrong Liu, Yu Tang Gao, Jie Ding, Jin Zhang
Software Mentions: 6
Published: almost 5 years ago

10.3389/fgene.2013.00303

Experimental assessment of static and dynamic algorithms for gene regulation inference from time series expression data
Cited by: 18
Author(s): Mário Lopes, Gianluca Bontempi
Software Mentions: 6
Published: almost 12 years ago

10.1186/1471-2164-15-S10-S1

AucPR: An AUC-based approach using penalized regression for disease prediction with high-dimensional omics data
Cited by: 6
Author(s): Wenbao Yu, Taesung Park
Software Mentions: 5
Published: almost 10 years ago

10.3389/fcell.2021.721505

Integrated Analysis of Copy Number Variation, Microsatellite Instability, and Tumor Mutation Burden Identifies an 11-Gene Signature Predicting Survival in Breast Cancer
Cited by: 5
Author(s): Xin Jin, Yan Junfeng, Chuanzhi Chen, Yi Chen, Wen‐Shih Huang
Software Mentions: 5
Published: about 3 years ago

10.3389/fgene.2021.649196

A Fast Multi-Locus Ridge Regression Algorithm for High-Dimensional Genome-Wide Association Studies
Cited by: 1
Author(s): Jin Zhang, Min Chen, Yang Wen, Yin Zhang, Yunan Lu, Shengmeng Wang, Juncong Chen
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0195070

Bayesian variable selection with graphical structure learning: Applications in integrative genomics
Cited by: 7
Author(s): Suprateek Kundu, Yu‐Shan Cheng, Minsuk Shin, Ganiraju C. Manyam, Bani K. Mallick, Veerabhadran Baladandayuthapani
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pgen.1006639

The highly buffered Arabidopsis immune signaling network conceals the functions of its components
Cited by: 102
Author(s): Rachel Hillmer, Kazuhiko Tsuda, Ghanasyam Rallapalli, Shuji Asai, William Truman, Matthew D Papke, Hitoshi Sakakibara, Jonathan D. G. Jones, Chad L. Myers, Fumiaki Katagiri
Software Mentions: 5
Published: over 7 years ago

10.1186/1471-2407-9-164

Do serum biomarkers really measure breast cancer?
Cited by: 40
Author(s): Jonathan L. Jesneck, Sayan Mukherjee, Zoya R. Yurkovetsky, Merlise A. Clyde, Jeffrey R. Marks, Anna Lokshin, Joseph Y. Lo
Software Mentions: 5
Published: over 15 years ago

10.1371/journal.pone.0006287

The Validation and Assessment of Machine Learning: A Game of Prediction from High-Dimensional Data
Cited by: 25
Author(s): Tune H. Pers, Anders Albrechtsen, Claus Holst, Thorkild I. A. Sørensen, Thomas Alexander Gerds
Software Mentions: 5
Published: over 15 years ago

10.1186/1471-2164-14-S1-S14

Scoring relevancy of features based on combinatorial analysis of Lasso with application to lymphoma diagnosis
Cited by: 25
Author(s): Habil Zare, Gholamreza Haffari, Arvind Gupta, Ryan R. Brinkman
Software Mentions: 4
Published: almost 12 years ago

10.1186/1755-8794-6-S3-S1

A categorical network approach for discovering differentially expressed regulations in cancer
Cited by: 2
Author(s): Nikolay Balov
Software Mentions: 4
Published: almost 12 years ago

10.1038/s41598-018-21222-2

Prime and Boost Vaccination Elicit a Distinct Innate Myeloid Cell Immune Response
Cited by: 26
Author(s): Jean-Louis Palgen, Nicolas Tchitchek, Jamila Elhmouzi-Younes, Simon Delandre, Inana Namet, Pierre Rosenbaum, Nathalie Dereuddre‐Bosquet, Frédéric Martinon, Antonio Cosma, Yves Lévy, Roger Le Grand, Anne-Sophie Beignon
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pgen.1003926

Fine-Mapping the Genetic Association of the Major Histocompatibility Complex in Multiple Sclerosis: HLA and Non-HLA Effects
Cited by: 235
Author(s): Nikolaos A. Patsopoulos, Lisa F. Barcellos, Rogier Q. Hintzen, Catherine Schaefer, Cornelia M. van Duijn, Janelle A. Noble, Towfique Raj, Pierre-Antoine Gourraud, Barbara Elaine Stranger, Jorge R. Oksenberg, Tomas Olsson, Bruce Taylor, Stephen Sawcer, David A. Hafler, Mary Carrington, Philip L. De Jager, Paul I. W. de Bakker
Software Mentions: 4
Published: about 11 years ago

10.3389/fonc.2020.604266

Prediction of Pathological Upgrading at Radical Prostatectomy in Prostate Cancer Eligible for Active Surveillance: A Texture Features and Machine Learning-Based Analysis of Apparent Diffusion Coefficient Maps
Cited by: 10
Author(s): Jinke Xie, Basen Li, Xiangde Min, Peipei Zhang, Chanyuan Fan, Qiubai Li, Liang Wang
Software Mentions: 4
Published: almost 4 years ago

10.1016/j.crfs.2021.02.007

Spoilage assessment of chicken breast fillets by means of fourier transform infrared spectroscopy and multispectral image analysis
Cited by: 13
Author(s): Evgenia D. Spyrelli, Onur Özcan, Fady Mohareb, Efstathios Ζ. Panagou, George-John Nychas
Software Mentions: 3
Published: almost 4 years ago

10.1186/1471-2105-10-384

Regularized estimation of large-scale gene association networks using graphical Gaussian models
Cited by: 189
Author(s): Nicole Krämer, Juliane Schäfer, Anne‐Laure Boulesteix
Software Mentions: 3
Published: almost 15 years ago

10.3389/fpls.2018.01464

The Application of Multi-Locus GWAS for the Detection of Salt-Tolerance Loci in Rice
Cited by: 64
Author(s): Yanru Cui, Fan Zhang, Yongli Zhou
Software Mentions: 3
Published: about 6 years ago

10.7150/ijbs.39046

Diagnostic, progressive and prognostic performance of m<sup>6</sup>A methylation RNA regulators in lung adenocarcinoma
Cited by: 38
Author(s): Zhizhi Zhuang, Liping Chen, Yuting Mao, Qun Zheng, Huiying Li, Yueyue Huang, Zijing Hu, Y. Jin
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0075378

Differences in Process Management and In-Hospital Delays in Treatment with iv Thrombolysis
Cited by: 17
Author(s): Julia Ferrari, Michael Knoflach, Leonhard Seyfang, Wilfried Lang
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pone.0096000

A Novel Genetic Score Approach Using Instruments to Investigate Interactions between Pathways and Environment: Application to Air Pollution
Cited by: 29
Author(s): Marie-Abèle Bind, Brent A. Coull, Helen Suh, Robert O. Wright, Andrea Baccarelli, Pantel Vokonas, Joel Schwartz
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0074578

Analysis of Nonlinear Gene Expression Progression Reveals Extensive Pathway and Age-Specific Transitions in Aging Human Brains
Cited by: 2
Author(s): Kajia Cao, Paul Ryvkin, Yi‐Ting Hwang, F. Brad Johnson, Li-San Wang
Software Mentions: 2
Published: about 11 years ago

Ecosyste.ms: Papers

Projects: cran: lars

Papers Mentioning lars 29