Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ipred

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ipred

Improved Predictors
54 versions
Latest release: over 1 year ago
32 dependent packages
191,576 downloads last month

Papers Mentioning ipred 29

10.1371/journal.pntd.0007969
Severity Index for Suspected Arbovirus (SISA): Machine learning for accurate prediction of hospitalization in subjects suspected of arboviral infection
Cited by: 10
Author(s): Rachel Sippy, Daniel F. Farrell, Daniel A. Lichtenstein, Ryan Nightingale, Megan Harris, Joseph Toth, Paris Hantztidiamantis, Nicholas Usher, Cinthya Cueva Aponte, Julio Barzallo Aguilar, Anthony Puthumana, Christina D. Lupone, Timothy P. Endy, Sadie J. Ryan, Anna M. Stewart-Ibarra
Software Mentions: 16
Published: almost 5 years ago
10.1186/s13040-016-0086-4
Prediction of donor splice sites using random forest with a new sequence encoding approach
Cited by: 31
Author(s): Prabina Kumar Meher, Tanmaya Kumar Sahu, Atmakuri Ramakrishna Rao
Software Mentions: 9
Published: almost 9 years ago
10.1371/journal.pone.0121102
ShapeR: An R Package to Study Otolith Shape Variation among Fish Populations
Cited by: 100
Author(s): Lísa Anne Libungan, Snæbjörn Pálsson
Software Mentions: 9
Published: over 9 years ago
10.1186/s13007-021-00744-3
PredCRG: A computational method for recognition of plant circadian genes by employing support vector machine with Laplace kernel
Cited by: 4
Author(s): Prabina Kumar Meher, Ansuman Mohapatra, Subhrajit Satpathy, Anuj Sharma, Isha Saini, Sukanta Kumar Pradhan, Anil Rai
Software Mentions: 8
Published: over 3 years ago
10.1186/gb-2013-14-12-r137
Integrative DNA methylation and gene expression analysis in high-grade soft tissue sarcomas
Cited by: 76
Author(s): Marcus Renner, Thomas Wolf, Hannah Meyer, Wolfgang Hartmann, Roland Penzel, Alexis Ulrich, Burkhard Lehner, Volker Hovestadt, Esteban Czwan, Gerlinde Egerer, Thomas Schmitt, Ingo Alldinger, Eva Kristin Renker, Volker Ehemann, Roland Eils, Eva Wardelmann, Reinhard Büttner, Peter Lichter, Benedikt Brors, Peter Schirmacher, Gunhild Mechtersheimer
Software Mentions: 8
Published: almost 12 years ago
10.3389/fmicb.2018.01100
nifPred: Proteome-Wide Identification and Categorization of Nitrogen-Fixation Proteins of Diaztrophs Based on Composition-Transition-Distribution Features Using Support Vector Machine
Cited by: 10
Author(s): Prabina Kumar Meher, Tanmaya Kumar Sahu, Jyotilipsa Mohanty, Shachi Gahoi, P. Supriya, Monendra Grover, Atmakuri Ramakrishna Rao
Software Mentions: 7
Published: over 6 years ago
10.1186/s12859-021-04049-z
R.ROSETTA: an interpretable machine learning framework
Cited by: 15
Author(s): Mateusz Garbulowski, Klev Diamanti, Karolina Smolińska, Nicholas Baltzer, Patricia Stoll, Susanne Bornelöv, Aleksander Øhrn, Lars Feuk, Jan Komorowski
Software Mentions: 7
Published: over 3 years ago
10.1002/bimj.201900155
A comparison of the beta‐geometric model with landmarking for dynamic prediction of time to pregnancy
Cited by: 1
Author(s): Rik van Eekelen, Hein Putter, David J. McLernon, Marinus J.C. Eijkemans, Nan van Geloven
Software Mentions: 7
Published: about 5 years ago
10.1155/2016/6794916
Determining Cutoff Point of Ensemble Trees Based on Sample Size in Predicting Clinical Dose with DNA Microarray Data
Cited by: 7
Author(s): Selen Yilmaz İşikhan, Erdem Karabulut, Celal Reha Alpar
Software Mentions: 6
Published: almost 9 years ago
10.1186/s13643-020-01520-5
Aligning text mining and machine learning algorithms with best practices for study selection in systematic literature reviews
Cited by: 10
Author(s): Evan Popoff, M. Besada, JP Jansen, Shannon Cope, Steve Kanters
Software Mentions: 6
Published: almost 4 years ago
10.1186/s12859-021-04264-8
mLoc-mRNA: predicting multiple sub-cellular localization of mRNAs using random forest algorithm coupled with feature selection via elastic net
Cited by: 6
Author(s): Prabina Kumar Meher, Anil Rai, Atmakuri Ramakrishna Rao
Software Mentions: 6
Published: over 3 years ago
10.1186/s43093-020-00041-w
Machine learning predictivity applied to consumer creditworthiness
Cited by: 13
Author(s): Maisa Cardoso Aniceto, Flávio Barboza, Herbert Kimura
Software Mentions: 6
Published: about 4 years ago
10.1186/gb-2005-6-9-r76
Cited by: 122
Author(s): Stephen Henderson, David B. Guiliano, Nadège Presneau, Sean R. McLean, Richard Frow, Sonja Vujovic, John Anderson, Neil J. Sebire, Jeremy Whelan, Nick Athanasou, Adrienne M. Flanagan, Chris Boshoff
Software Mentions: 6
Published: almost 20 years ago
10.1186/1471-2105-9-88
Comparison of normalisation methods for surface-enhanced laser desorption and ionisation (SELDI) time-of-flight (TOF) mass spectrometry data
Cited by: 43
Author(s): Wouter Meuleman, Judith Y. M. N. Engwegen, Marie-Christine W. Gast, Jos H. Beijnen, Marcel J. T. Reinders, Lodewyk Wessels
Software Mentions: 5
Published: almost 17 years ago
10.1002/bimj.201100251
Regression trees for predicting mortality in patients with cardiovascular disease: What improvement is achieved by using ensemble‐based methods?
Cited by: 58
Author(s): Peter C. Austin, Douglas S. Lee, Ewout W. Steyerberg, Jack V. Tu
Software Mentions: 5
Published: over 12 years ago
10.1371/journal.pone.0007556
An Eight-Gene Blood Expression Profile Predicts the Response to Infliximab in Rheumatoid Arthritis
Cited by: 92
Author(s): Antonio Julià, Alba Erra, Carles Palacio, Carlos Tomás, Xavier Sans, P Barceló, Sara Marsal
Software Mentions: 4
Published: about 15 years ago
10.1007/s11634-015-0227-5
Ensemble of a subset of kNN classifiers
Cited by: 64
Author(s): Asma Gul, Aris Perperoglou, Zardad Khan, Osama Mahmoud, Miftahuddin Miftahuddin, Werner Adler, Berthold Lausen
Software Mentions: 3
Published: almost 9 years ago
10.1186/1472-6947-11-51
Predicting disease risks from highly imbalanced data using random forest
Cited by: 450
Author(s): Mohammed Khalilia, Suman Bhusan Chakraborty, Mihail Popescu
Software Mentions: 3
Published: over 13 years ago
10.1038/s41598-020-67604-3
The major effects of health-related quality of life on 5-year survival prediction among lung cancer survivors: applications of machine learning
Cited by: 21
Author(s): Jin Ah Sim, Young Ae Kim, Ju Han Kim, Jong Mog Lee, Moon Soo Kim, Young Mog Shim, Jae Ill Zo, Young Ho Yun
Software Mentions: 3
Published: over 4 years ago
10.1002/sim.6787
Sample size considerations for the external validation of a multivariable prognostic model: a resampling study
Cited by: 406
Author(s): Gary S. Collins, Emmanuel O. Ogundimu, Douglas G. Altman
Software Mentions: 3
Published: about 9 years ago
10.5402/2012/546721
Computerized Decision Support System for Intraoperative Analysis of Margin Status in Breast Conservation Therapy
Cited by: 3
Author(s): Manuel E. Ruidíaz, Sarah L. Blair, Andrew C. Kummel, Jessica Wang‐Rodriguez
Software Mentions: 3
Published: about 12 years ago
10.1038/s41598-017-03577-0
A new look at risk patterns related to coronary heart disease incidence using survival tree analysis: 12 Years Longitudinal Study
Cited by: 7
Author(s): Azra Ramezankhani, Farideh Bagherzadeh‐Khiabani, Davood Khalili, Fereidoun Azizi, Farzad Hadaegh
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pgen.1008146
Identification and validation of genetic variants predictive of gait in standardbred horses
Cited by: 11
Author(s): Annette M. McCoy, Samantha K. Beeson, Carl-Johan Rubin, Leif Andersson, Paul Caputo, Sigrid Lykkjen, Alison Moore, Richard J. Piercy, James R. Mickelson, Molly E. McCue
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0134151
Improved Variable Selection Algorithm Using a LASSO-Type Penalty, with an Application to Assessing Hepatitis B Infection Relevant Factors in Community Residents
Cited by: 34
Author(s): Pi Guo, Fangfang Zeng, Xiao-Min Hu, Dingmei Zhang, Shuqian Zhu, Yu Deng, Hao Yuantao
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0049734
Sexual Dimorphism in Sturnira lilium (Chiroptera, Phyllostomidae): Can Pregnancy and Pup Carrying Be Responsible for Differences in Wing Shape?
Cited by: 34
Author(s): Nícholas F. de Camargo, Hernani Oliveira
Software Mentions: 2
Published: about 12 years ago
10.1186/1479-5876-10-123
The impact of laser ablation on optical soft tissue differentiation for tissue specific laser surgery-an experimental ex vivo study
Cited by: 21
Author(s): Florian Stelzle, Ingo Terwey, Christian Knipfer, Werner Adler, Katja Tangermann‐Gerk, Emeka Nkenke, Michael Schmidt
Software Mentions: 1
Published: over 12 years ago
10.3390/s131013717
Tissue Discrimination by Uncorrected Autofluorescence Spectra: A Proof-of-Principle Study for Tissue-Specific Laser Surgery
Cited by: 18
Author(s): Florian Stelzle, Christian Knipfer, Werner Adler, Maximilian Rohde, Nicolai Oetter, Emeka Nkenke, Michael Schmidt, Katja Tangermann‐Gerk
Software Mentions: 1
Published: about 11 years ago
10.3390/s151025416
Does Laser Surgery Interfere with Optical Nerve Identification in Maxillofacial Hard and Soft Tissue?—An Experimental Ex Vivo Study
Cited by: 4
Author(s): Bastian Bergauer, Christian Knipfer, Andreas Amann, Maximilian Rohde, Katja Tangermann‐Gerk, Werner Adler, Michael Schmidt, Emeka Nkenke, Florian Stelzle
Software Mentions: 1
Published: about 9 years ago
10.18632/oncotarget.6685
CD69 expression potentially predicts response to bendamustine and its modulation by ibrutinib or idelalisib enhances cytotoxic effect in chronic lymphocytic leukemia
Cited by: 21
Author(s): Arnau Montraveta, Eriong Lee-Vergés, Jocabed Roldán, Laura Jiménez, Sandra Columba-Cabezas, Guillem Clot, Magda Pinyol, Sílvia Xargay-Torrent, Laia Rosich, Cristina Arimany-Nardí, Marta Aymerich, Neus Villamor, Armando López‐Guillermo, Patricia Pérez-Galán, Gaël Roué, Marçal Pastor–Anglada, Elı́as Campo, Mònica López‐Guerra, Dolors Colomer
Software Mentions: 1
Published: almost 9 years ago