Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ioncopy

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ioncopy

Calling Copy Number Alterations in Amplicon Sequencing Data
6 versions
Latest release: over 4 years ago
207 downloads last month

Papers Mentioning ioncopy 3

10.1002/1878-0261.12776
Fine‐needle aspiration as an alternative to core needle biopsy for tumour molecular profiling in precision oncology: prospective comparative study of next‐generation sequencing in cancer patients included in the SHIVA02 trial
Cited by: 9
Author(s): Célia Dupain, Julien Masliah‐Planchon, Céline Gu, Elodie Girard, Pierre Gestraud, Pauline du Rusquec, Édith Borcoman, Diana Bello, Francesco Ricci, Ségolène Hescot, Marie‐Paule Sablin, Patricia Tresca, Alexandre de Moura, Delphine Loirat, Maxime Frélaut, Anne Vincent‐Salomon, Charlotte Lecerf, Céline Callens, Samantha Antonio, Coralie Franck, Odette Mariani, Ivan Bièche, Maud Kamal, Christophe Le Tourneau, Vincent Servois
Software Mentions: 4
Published: about 4 years ago
10.18632/oncotarget.7451
Ioncopy: a novel method for calling copy number alterations in amplicon sequencing data including significance assessment
Cited by: 21
Author(s): Jan Budczies, Nicole Pfarr, Albrecht Stenzinger, Denise Treue, Volker Endris, Fakher Ismaéel, Nikola Bangemann, Jens-Uwe Blohmer, Manfred Dietel, Sibylle Loibl, Frederick Klauschen, Wilko Weichert, Carsten Denkert
Software Mentions: 3
Published: almost 9 years ago
10.1186/s12859-018-2159-5
Ioncopy: an R Shiny app to call copy number alterations in targeted NGS data
Cited by: 3
Author(s): Jan Budczies, Nicole Pfarr, Eva Romanovsky, Volker Endris, Albrecht Stenzinger, Carsten Denkert
Software Mentions: 1
Published: over 6 years ago