Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: indicspecies

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/indicspecies

Relationship Between Species and Groups of Sites
21 versions
Latest release: over 1 year ago
2 dependent packages
1,809 downloads last month

Papers Mentioning indicspecies 218

10.7717/peerj.7376

Microbial taxonomical composition in spruce phyllosphere, but not community functional structure, varies by geographical location
Cited by: 4
Author(s): Yunshi Li, Xiukun Wu, Wanfu Wang, Minghao Wang, Changming Zhao, Tuo Chen, Guangxiu Lu, Wei Zhang, Shi-Weng Li, Huaizhe Zhou, Minghui Wu, Ruiqi Yang, Gaosen Zhang
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.6042

Drivers and assemblies of soil eukaryotic microbes among different soil habitat types in a semi-arid mountain in China
Cited by: 9
Author(s): He Zhao, Xuanzhen Li, Zhi‐Ming Zhang, Ye Zhao, Peng Chen, Yiwei Zhu
Software Mentions: 2
Published: almost 6 years ago

10.3390/ani10010109

Ruminal Microbiota and Fermentation in Response to Dietary Protein and Energy Levels in Weaned Lambs
Cited by: 17
Author(s): Xiaokang Lv, Kai Cui, Minli Qi, Shiqin Wang, Qiyu Diao, Naifeng Zhang
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-021-84965-5

How mountains and elevations shape the spatial distribution of beetles in Peninsular Malaysia
Cited by: 5
Author(s): Muneeb M. Musthafa, Fauziah Abdullah, Ana Paola Martínez-Falcón, Mark de Bruyn
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2018.00213

Body Mass Index and Sex Affect Diverse Microbial Niches within the Gut
Cited by: 79
Author(s): Francesca Borgo, Stefania Garbossa, Alessandra Riva, Marco Severgnini, Carmelo Luigiano, Albero Benetti, Antonio E. Pontiroli, Giulia Morace, Elisa Borghi
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2015.01408

Intestinal Microbiota Signatures Associated with Inflammation History in Mice Experiencing Recurring Colitis
Cited by: 92
Author(s): David Berry, Orest Kuzyk, Isabella Rauch, Susanne Heider, Clarissa Schwab, Eva Hainzl, Thomas Decker, Mathias Müller, Birgit Strobl, Christa Schleper, Tim Urich, Michael Wagner, Lukas Kenner, Alexander Loy
Software Mentions: 2
Published: almost 9 years ago

10.3389/fmicb.2020.594617

Selective Bacterial Colonization of the Murine Larynx in a Gnotobiotic Model
Cited by: 3
Author(s): Ran An, Madhu Gowda, Federico E. Rey, Susan L. Thibeault
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2021.581124

Patterns in Benthic Microbial Community Structure Across Environmental Gradients in the Beaufort Sea Shelf and Slope
Cited by: 11
Author(s): A. Walker, Mary Beth Leigh, Sarah L. Mincks
Software Mentions: 2
Published: almost 4 years ago

10.3390/microorganisms8030446

Do Foliar Endophytes Matter in Litter Decomposition?
Cited by: 26
Author(s): Emily R. Wolfe, Daniel J. Ballhorn
Software Mentions: 1
Published: over 4 years ago

10.7717/peerj.8296

Temporal and spatial variability of terrestrial diatoms at the catchment scale: controls on communities
Cited by: 11
Author(s): Jasper Foets, Carlos E. Wetzel, Adriaan J. Teuling, Laurent Pfister
Software Mentions: 1
Published: almost 5 years ago

10.3389/fcimb.2020.00259

High Levels of Oxidative Stress Create a Microenvironment That Significantly Decreases the Diversity of the Microbiota in Diabetic Chronic Wounds and Promotes Biofilm Formation
Cited by: 29
Author(s): Jane H. Kim, Paul R Ruegger, Elyson Gavin D. Lebig, Samantha VanSchalkwyk, Daniel R. Jeske, Ansel Hsiao, James Borneman, Manuela Martins‐Green
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2019.00588

Endophytic Communities of Transgenic Poplar Were Determined by the Environment and Niche Rather Than by Transgenic Events
Cited by: 21
Author(s): Yan Bo Wang, Weixi Zhang, Changjun Ding, Bingyu Zhang, Qinjun Huang, Rongfeng Huang, Xiaohua Su
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0157847

The Microbiome and Metabolites in Fermented Pu-erh Tea as Revealed by High-Throughput Sequencing and Quantitative Multiplex Metabolite Analysis
Cited by: 54
Author(s): Yongjie Zhang, Ida Skaar, Michael Sulyok, Xingzhong Liu, M. Poornachander Rao, John W. Taylor
Software Mentions: 1
Published: over 8 years ago

10.1264/jsme2.ME16136

Prokaryotic Communities at Different Depths between Soils with and without Tomato Bacterial Wilt but Pathogen-Present in a Single Greenhouse
Cited by: 10
Author(s): Chol Gyu Lee, Toshiya Iida, Yasuhiro Inoue, Yasunori Muramoto, H. Watanabe, Kazuhiro Nakaho, Moriya Ohkuma
Software Mentions: 1
Published: almost 8 years ago

10.7717/peerj.2412

Whole gut microbiome composition of damselfish and cardinalfish before and after reef settlement
Cited by: 50
Author(s): Darren J. Parris, Rohan M. Brooker, Michael A. Morgan, Danielle L. Dixson, Frank J. Stewart
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0150380

Evaluating the Applicability of Phi Coefficient in Indicating Habitat Preferences of Forest Soil Fauna Based on a Single Field Study in Subtropical China
Cited by: 2
Author(s): Yinan Cui, Silong Wang, Shiguang Yan
Software Mentions: 1
Published: over 8 years ago

10.1002/ece3.5893

Using a trait‐based approach for assessing the vulnerability and resilience of hillslope seep wetland vegetation cover to disturbances in the Tsitsa River catchment, Eastern Cape, South Africa
Cited by: 7
Author(s): Notiswa Libala, Carolyn G. Palmer, Oghenekaro Nelson Odume
Software Mentions: 1
Published: almost 5 years ago

10.1007/s00572-021-01041-6

Disentangling the relative importance of spatio-temporal parameters and host specificity in shaping arbuscular mycorrhizal fungus communities in a temperate forest
Cited by: 13
Author(s): Leonie Grünfeld, Magkdi Mola, Monika Wulf, Stefan Hempel, Stavros D. Veresoglou
Software Mentions: 1
Published: over 3 years ago