cran: iNEXT | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2019.00665

Microbial Diversity and Connectivity in Deep-Sea Sediments of the South Atlantic Polar Front
Cited by: 31
Author(s): Gilda Varliero, Christina Bienhold, Florian Schmid, Antje Boetius, Massimiliano Molari
Software Mentions: 13
Published: over 5 years ago

10.1038/s41598-020-66107-5

Spatio-temporal trends in richness and persistence of bacterial communities in decline-phase water vole populations
Cited by: 5
Author(s): Petra Villette, Eve Afonso, Geoffroy Couval, Aurélien Levret, Maxime Galan, A.-C. Goydadin, Jean-François Cosson, Patrick Giraudoux
Software Mentions: 11
Published: over 4 years ago

10.1002/ece3.7515

Forest Saccharomyces paradoxus are robust to seasonal biotic and abiotic changes
Cited by: 4
Author(s): Primrose J. Boynton, Dominika Wloch‐Salamon, Doreen Landermann, Eva H. Stukenbrock
Software Mentions: 11
Published: over 3 years ago

10.3389/fmicb.2020.01391

Stochastic Dispersal Rather Than Deterministic Selection Explains the Spatio-Temporal Distribution of Soil Bacteria in a Temperate Grassland
Cited by: 31
Author(s): Tim Richter-Heitmann, Benjamin Hofner, Franz‐Sebastian Krah, Johannes Sikorski, Pia K. Wüst, Boyke Bunk, Sixing Huang, Kathleen M. Regan, Doreen Berner, Runa S. Boeddinghaus, Sven Marhan, Daniel Prati, Ellen Kandeler, Jörg Overmann, Michael W. Friedrich
Software Mentions: 11
Published: over 4 years ago

10.3389/fmicb.2018.02301

Aquatic Bacterial Communities Associated With Land Use and Environmental Factors in Agricultural Landscapes Using a Metabarcoding Approach
Cited by: 38
Author(s): Wen Chen, Graham Wilkes, Izhar U. H. Khan, Katarina Pintar, Joseph P. Thomas, C. André Lévesque, Julie T. Chapados, Edward Topp, David R. Lapen
Software Mentions: 11
Published: about 6 years ago

10.3897/zookeys.1044.62340

Carabid beetle (Coleoptera, Carabidae) richness, diversity, and community structure in the understory of temporarily flooded and non-flooded Amazonian forests of Ecuador
Cited by: 2
Author(s): Kathryn N. Riley Peterson, Robert A. Browne, Terry L. Erwin
Software Mentions: 10
Published: over 3 years ago

10.3897/mycokeys.81.66249

Soil fungal communities of ectomycorrhizal dominated woodlands across West Africa
Cited by: 6
Author(s): Peter Meidl, Brendan Furneaux, Kassim I. Tchan, Kerri L. Kluting, Martin Ryberg, Marie-Laure Guissou, Bakary Soro, Aïssata Traoré, Gbamon Konomou, Nourou S. Yorou, Anna Rosling
Software Mentions: 9
Published: over 3 years ago

10.7717/peerj.4555

Small tropical islands with dense human population: differences in water quality of near-shore waters are associated with distinct bacterial communities
Cited by: 10
Author(s): Hauke Kegler, Christiane Hassenrück, Pia Kegler, Tim C Jennerjahn, Muhammad Lukman, Jamaluddin Jompa, Astrid Gärdes
Software Mentions: 9
Published: over 6 years ago

10.1002/ece3.7662

Ant community composition and functional traits in new grassland strips within agricultural landscapes
Cited by: 5
Author(s): Victor Sebastian Scharnhorst, Konrad Fiedler, Thomas Frank, Dietmar Moser, Dominik Rabl, Manuela Brandl, Raja Imran Hussain, Ronnie Walcher, Bea Maas
Software Mentions: 9
Published: over 3 years ago

10.1371/journal.pone.0243070

Temporal changes in bird communities in areas with different histories of fire disturbance in highland grasslands of Brazil
Cited by: 3
Author(s): Eduardo Chiarani, Maurício Bettio, Carla Suertegaray Fontana
Software Mentions: 9
Published: almost 4 years ago

10.1002/ece3.5927

Islands in the desert for cavity‐nesting bees and wasps: Ecology, patterns of diversity, and conservation at oases of Baja California Peninsula
Cited by: 4
Author(s): Armando Falcón‐Brindis, María Luisa Jiménez, Ricardo Rodríguez‐Estrella
Software Mentions: 9
Published: almost 5 years ago

10.1002/ece3.6941

A priori estimation of sequencing effort in complex microbial metatranscriptomes
Cited by: 2
Author(s): Toni Monleón-Getino, Jorge Frias-Lopez
Software Mentions: 8
Published: about 4 years ago

10.3389/fmicb.2018.01868

Exposure to Yeast Shapes the Intestinal Bacterial Community Assembly in Zebrafish Larvae
Cited by: 29
Author(s): Prabhugouda Siriyappagouder, Jorge Galindo-Villegas, Jep Lokesh, Victoriano Mulero, Jorge M. O. Fernandes, Viswanath Kiron
Software Mentions: 8
Published: over 6 years ago

10.1038/s41396-021-00949-3

Social networks strongly predict the gut microbiota of wild mice
Cited by: 51
Author(s): Aura Raulo, Bryony Allen, Tanya Troitsky, Arild Husby, Josh A. Firth, Tim Coulson, Sarah C. L. Knowles
Software Mentions: 8
Published: over 3 years ago

10.3389/fmicb.2018.03247

Lactobacillus Dominate in the Intestine of Atlantic Salmon Fed Dietary Probiotics
Cited by: 45
Author(s): S. R. Gupta, Adriána Fečkaninová, Jep Lokesh, Jana Koščová, Mette Sørensen, Jorge M. O. Fernandes, Viswanath Kiron
Software Mentions: 8
Published: almost 6 years ago

10.1128/mSphere.00176-18

High Rate of Infection by Only Oncogenic Human Papillomavirus in Amerindians
Cited by: 10
Author(s): Daniela Vargas-Robles, Magda Magris, Natalia Morales, Maurits N.C. de Koning, Iveth Rodríguez, Tahidid Nieves, Filipa Godoy-Vitorino, Gloria Inés Sánchez, Luis David Alcaraz, Larry J. Forney, María-Eglée Pérez, Luis García-Briceño, Leen–Jan van Doorn, Maria Gloria Domínguez-Bello
Software Mentions: 8
Published: over 6 years ago

10.1002/ece3.4704

Flying between raindrops: Strong seasonal turnover of several Lepidoptera groups in lowland rainforests of Mount Cameroon
Cited by: 28
Author(s): Vincent Maicher, Szabolcs Sáfián, Mercy Murkwe, Łukasz Przybyłowicz, Štěpán Janeček, Eric B. Fokam, Tomasz W. Pyrcz, Robert Tropek
Software Mentions: 7
Published: almost 6 years ago

10.1111/gcb.15302

Stream microbial communities and ecosystem functioning show complex responses to multiple stressors in wastewater
Cited by: 44
Author(s): Francis J. Burdon, Yaohui Bai, Marta Reyes, Manu Tamminen, Philipp Staudacher, Simon Mangold, Heinz Singer, Katja Räsänen, Adriano Joss, Scott D. Tiegs, Jukka Jokela, Rik I.L. Eggen, Christian Stamm
Software Mentions: 7
Published: about 4 years ago

10.1038/s41598-020-60575-5

Dung beetles response to livestock management in three different regional contexts
Cited by: 8
Author(s): Celeste Beatriz Guerra Alonso, Gustavo A. Zurita, M. Isabel Bellocq
Software Mentions: 7
Published: over 4 years ago

10.1371/journal.pone.0155826

Elevational Distribution of Flightless Ground Beetles in the Tropical Rainforests of North-Eastern Australia
Cited by: 10
Author(s): Kyran M. Staunton, Akihiro Nakamura, Chris J. Burwell, Simon K. A. Robson, Stephen E. Williams
Software Mentions: 7
Published: over 8 years ago

10.1038/s41598-020-67221-0

Diversity hotspot and unique community structure of foraminifera in the world’s deepest marine blue hole – Sansha Yongle Blue Hole
Cited by: 13
Author(s): Qingxia Li, Yanli Lei, Raphaёl Morard, Tiegang Li, Baodong Wang
Software Mentions: 7
Published: over 4 years ago

10.3897/zookeys.1044.59475

Early successional dynamics of ground beetles (Coleoptera, Carabidae) in the tropical dry forest ecosystem in Colombia
Cited by: 3
Author(s): Gloria María Ariza, Jorge González Jácome, Héctor Eduardo Esquivel, D. Johan Kotze
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0204764

Evidence of forest restoration success and the conservation value of community-owned forests in Southwest China using dung beetles as indicators
Cited by: 6
Author(s): Casey D. Sullivan, Eleanor M. Slade, Ming Bai, Kun Shi, Philip Riordan
Software Mentions: 7
Published: about 6 years ago

10.1093/molbev/msaa122

The Architecture of Metabolism Maximizes Biosynthetic Diversity in the Largest Class of Fungi
Cited by: 29
Author(s): Emile Gluck‐Thaler, Sajeet Haridas, Manfred Binder, Igor V. Grigoriev, Pedro W. Crous, Joseph W. Spatafora, Kathryn E. Bushley, Jason C. Slot
Software Mentions: 7
Published: over 4 years ago

10.3389/fmicb.2020.592189

From Forest Soil to the Canopy: Increased Habitat Diversity Does Not Increase Species Richness of Cercozoa and Oomycota in Tree Canopies
Cited by: 6
Author(s): Robin-Tobias Jauss, Susanne Walden, Anna Maria Fiore‐Donno, Kenneth Dumack, Stefan Schaffer, Ronny Wolf, Martin Schlegel, Michael Bonkowski
Software Mentions: 7
Published: almost 4 years ago

10.7717/peerj.6197

Carabid community structure in northern China grassland ecosystems: Effects of local habitat on species richness, species composition and functional diversity
Cited by: 24
Author(s): Noëlline Tsafack, François Rebaudo, Hui Wang, D Nagy, Yi Xie, Xinpu Wang, Simone Fattorini
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0242020

Comparing the success of active and passive restoration in a tropical cloud forest landscape: A multi-taxa fauna approach
Cited by: 20
Author(s): Juan Manuel Díaz-García, Fabiola López‐Barrera, Eduardo Pineda, Tarin Toledo‐Aceves, Ellen Andresen
Software Mentions: 7
Published: about 4 years ago

10.1038/srep29532

Delineation of autoantibody repertoire through differential proteogenomics in hepatitis C virus-induced cryoglobulinemia
Cited by: 12
Author(s): Masato Ogishi, Hiroshi Yotsuyanagi, Kyoji Moriya, Kazuhiko Koike
Software Mentions: 7
Published: over 8 years ago

10.1371/journal.pone.0179956

Author contributions to ecological publications: What does it mean to be an author in modern ecological research?
Cited by: 17
Author(s): John M. Logan, Sarah B. Bean, Alan A. Myers
Software Mentions: 7
Published: over 7 years ago

10.1002/ece3.4194

Vertical canopy gradient shaping the stratification of leaf‐chewer–parasitoid interactions in a temperate forest
Cited by: 15
Author(s): Martin Šigut, Hana Šigutová, Ján Šipoš, Petr Pyszko, Nela Kotásková, Pavel Drozd
Software Mentions: 7
Published: over 6 years ago

10.1186/s12936-017-1738-7

Change in Anopheles richness and composition in response to artificial flooding during the creation of the Jirau hydroelectric dam in Porto Velho, Brazil
Cited by: 9
Author(s): Moreno S. Rodrigures, Elis P. A. Batista, Alexandre de Almeida e Silva, Fábio Medeiros da Costa, Verissimo A. S. Neto, Luiz Herman Soares Gil
Software Mentions: 7
Published: over 7 years ago

10.1111/mec.15724

Leech blood‐meal invertebrate‐derived DNA reveals differences in Bornean mammal diversity across habitats
Cited by: 19
Author(s): Rosie Drinkwater, Tommaso Jucker, Joshua H.T. Potter, Tom Swinfield, David A. Coomes, Eleanor M. Slade, M. Thomas P. Gilbert, Owen T. Lewis, Henry Bernard, Matthew J. Struebig, Elizabeth L. Clare, Stephen J. Rossiter
Software Mentions: 7
Published: almost 4 years ago

10.1002/ece3.7968

Effects of consumer surface sterilization on diet DNA metabarcoding data of terrestrial invertebrates in natural environments and feeding trials
Cited by: 7
Author(s): Ana Miller‐ter Kuile, Austen Apigo, Hillary S. Young
Software Mentions: 6
Published: over 3 years ago

10.1186/s40168-020-00962-2

Japanese quail (Coturnix japonica) as a novel model to study the relationship between the avian microbiome and microbial endocrinology-based host-microbe interactions
Cited by: 8
Author(s): Joshua M. Lyte, James Keane, Julia Eckenberger, Nicholas B. Anthony, Sandip Shrestha, Daya Marasini, Karrie M. Daniels, Valentina Caputi, Annie Donoghue, Mark Lyte
Software Mentions: 6
Published: almost 4 years ago

10.1038/ismej.2017.165

Recurrent patterns of microdiversity in a temperate coastal marine environment
Cited by: 110
Author(s): Meghan Chafee, Antonio Fernández-Guerra, Pier Luigi Buttigieg, Gunnar Gerdts, A. Murat Eren, Hanno Teeling, Rudolf Amann
Software Mentions: 6
Published: about 7 years ago

10.1186/s13073-016-0322-z

B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation
Cited by: 55
Author(s): Jacob D. Galson, Johannes Trück, Elizabeth A. Clutterbuck, Anna Fowler, Vincenzo Cerundolo, Andrew J. Pollard, Gerton Lunter, Dominic F. Kelly
Software Mentions: 6
Published: over 8 years ago

10.1186/s12915-021-01088-z

Mangroves are an overlooked hotspot of insect diversity despite low plant diversity
Cited by: 17
Author(s): Darren C. J. Yeo, Amrita Srivathsan, Jayanthi Puniamoorthy, Maosheng Foo, Patrick Grootaert, Lena Chan, Benoit Guénard, Claas Damken, Rodzay Abdul Wahab, Ang Y, Rudolf Meier
Software Mentions: 6
Published: about 3 years ago

10.7717/peerj.3730

Uncovering unseen fungal diversity from plant DNA banks
Cited by: 16
Author(s): Erin M. Datlof, Anthony S. Amend, Kamala Earl, J. Hayward, Clifford W. Morden, Rachael Wade, Geoffrey Zahn, Nicole A. Hynson
Software Mentions: 6
Published: about 7 years ago

10.3390/insects12020135

Joint Impacts of Drought and Habitat Fragmentation on Native Bee Assemblages in a California Biodiversity Hotspot
Cited by: 9
Author(s): Keng‐Lou James Hung, Sara Sandoval, John S. Ascher, David A. Holway
Software Mentions: 6
Published: almost 4 years ago

10.1038/s41598-020-80533-5

Structural aspects of lesional and non-lesional skin microbiota reveal key community changes in leprosy patients from India
Cited by: 5
Author(s): Nitin Bayal, Sunil Nagpal, Mohammed Monzoorul Haque, Milind S. Patole, Yogesh S. Shouche, Shekhar C. Mande, Sharmila S. Mande
Software Mentions: 6
Published: almost 4 years ago

10.3389/fmicb.2018.00387

The Intestinal Mycobiota in Wild Zebrafish Comprises Mainly Dothideomycetes While Saccharomycetes Predominate in Their Laboratory-Reared Counterparts
Cited by: 23
Author(s): Prabhugouda Siriyappagouder, Viswanath Kiron, Jep Lokesh, Moger Rajeish, Martina Kopp, Jorge M. O. Fernandes
Software Mentions: 6
Published: over 6 years ago

10.3389/fmicb.2018.02533

Cervicovaginal Fungi and Bacteria Associated With Cervical Intraepithelial Neoplasia and High-Risk Human Papillomavirus Infections in a Hispanic Population
Cited by: 57
Author(s): Filipa Godoy-Vitorino, Josefina Romaguera, Chunyu Zhao, Daniela Vargas-Robles, Gilmary Ortiz-Morales, Frances Vázquez-Sánchez, María M. Sánchez-Vázquez, Manuel de la Garza-Casillas, Magaly Martínez‐Ferrer, James R. White, Kyle Bittinger, Maria Gloria Domínguez-Bello, Martin J. Blaser
Software Mentions: 6
Published: about 6 years ago

10.1038/s41598-021-99441-3

Potential impacts of polymetallic nodule removal on deep-sea meiofauna
Cited by: 8
Author(s): Ellen Pape, Tânia Campinas Bezerra, Hendrik Gheerardyn, Marius Buydens, Amanda Kieswetter, Ann Vanreusel
Software Mentions: 6
Published: about 3 years ago

10.3390/pathogens10081063

Gut Microbiota in Military International Travelers with Doxycycline Malaria Prophylaxis: Towards the Risk of a Simpson Paradox in the Human Microbiome Field
Cited by: 1
Author(s): Émilie Javelle, Aurélie Mayet, Matthieu Million, Anthony Levasseur, Rodrigue S. Allodji, Catherine Marimoutou, Chrystel Lavagna, Jérôme Desplans, Pierre-Édouard Fournier, Didier Raoult, Gaëtan Texier
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0225266

Disentangling the coexistence strategies of mud-daubing wasp species through trophic analysis in oases of Baja California peninsula
Cited by: 4
Author(s): Armando Falcón‐Brindis, Ricardo Rodríguez‐Estrella, María-Luisa Jiménez
Software Mentions: 6
Published: about 5 years ago

10.1186/s13071-019-3524-6

Metazoan parasite infracommunities of the dusky flounder (Syacium papillosum) as bioindicators of environmental conditions in the continental shelf of the Yucatan Peninsula, Mexico
Cited by: 30
Author(s): Víctor M. Vidal‐Martínez, Iván Velázquez‐Abunader, Oscar Arturo Centeno-Chalé, Ana Luisa May-Tec, Lilia C. Soler-Jiménez, Daniel Pech, Ismael Mariño‐Tapia, Cecilia Enríquez, Omar Zapata-Pérez, Jorge Herrera-Silveira, David Iván Hernández-Mena, Sharon Z. Herzka, Uriel Ordóñez-López, M. Leopoldina Aguirre-Macedo
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-020-60929-z

Chronic disturbance modulates symbiont (Symbiodiniaceae) beta diversity on a coral reef
Cited by: 11
Author(s): Danielle C. Claar, Kristina L. Tietjen, Kieran Cox, Ruth D. Gates, Julia K. Baum
Software Mentions: 6
Published: over 4 years ago

10.1186/s40168-020-00809-w

Lifting the veil on arid-to-hyperarid Antarctic soil microbiomes: a tale of two oases
Cited by: 15
Author(s): Eden Zhang, L Thibaut, Aleks Terauds, Mark Raven, Mark M. Tanaka, Josie van Dorst, Sin Yin Wong, Sally Crane, Belinda C. Ferrari
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0218775

Birds vs bricks: Patterns of species diversity in response to urbanization in a Neotropical Andean city
Cited by: 24
Author(s): Juan D. Carvajal-Castro, Ana María Ospina-L, Yemay Toro-López, Anny Pulido-G, Laura Ximena Cabrera-Casas, Sebastián Guerrero-Peláez, Víctor Hugo García-Merchán, Fernando Vargas‐Salinas
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-020-74428-8

Large seasonal and spatial variation in nano- and microphytoplankton diversity along a Baltic Sea—North Sea salinity gradient
Cited by: 6
Author(s): Malin Olofsson, James G. Hagan, Bengt Karlson, Lars Gamfeldt
Software Mentions: 6
Published: about 4 years ago

10.3390/jof6030180

Stem Endophytic Mycobiota in Wild and Domesticated Wheat: Structural Differences and Hidden Resources for Wheat Improvement
Cited by: 17
Author(s): Xiang Sun, Evsey Kosman, Amir Sharon
Software Mentions: 5
Published: about 4 years ago

10.7717/peerj.11898

Biogeography, diversity and environmental relationships of shelf and deep-sea benthic Amphipoda around Iceland
Cited by: 7
Author(s): Anne‐Nina Lörz, Stefanie Kaiser, Jens Oldeland, Caroline Stolter, Karlotta Kürzel, Saskia Brix
Software Mentions: 5
Published: over 3 years ago

10.1186/s12864-021-08036-9

Repertoire analysis of γδ T cells in the chicken enables functional annotation of the genomic region revealing highly variable pan-tissue TCR gamma V gene usage as well as identifying public and private repertoires
Cited by: 5
Author(s): Robert J. Dixon, Stephen G. Preston, Stefan Dascalu, Patrik G. Flammer, Steven R. Fiddaman, Kirstie McLoughlin, Amy Boyd, Jiřı́ Volf, Ivan Rychlı́k, Michael B. Bonsall, Bernd Kaspers, Adrian L. Smith
Software Mentions: 5
Published: about 3 years ago

10.1111/mec.15538

The balance between deterministic and stochastic processes in structuring lake bacterioplankton community over time
Cited by: 39
Author(s): Pablo S. Aguilar, Rubén Sommaruga
Software Mentions: 5
Published: over 4 years ago

10.1002/ece3.7952

Functional diversity of avian communities increases with canopy height: From individual behavior to continental‐scale patterns
Cited by: 5
Author(s): Vladimír Remeš, Eva Remešová, Nicholas R. Friedman, Beata Matysioková, Lucia Rubáčová
Software Mentions: 5
Published: over 3 years ago

10.1186/s12983-018-0276-7

NGS barcoding reveals high resistance of a hyperdiverse chironomid (Diptera) swamp fauna against invasion from adjacent freshwater reservoirs
Cited by: 23
Author(s): Bilgenur Baloğlu, Esther Clews, Rudolf Meier
Software Mentions: 5
Published: over 6 years ago

10.3390/jof7080587

Soil Mycobiome Is Shaped by Vegetation and Microhabitats: A Regional-Scale Study in Southeastern Brazil
Cited by: 7
Author(s): Danielle Hamae Yamauchi, Hans Garcia Garces, Marcus de Melo Teixeira, Gabriel Fellipe Barros Rodrigues, Leila Sabrina Ullmann, Adalberto Garcia Garces, Flávia Hebeler-Barbosa, Eduardo Bagagli
Software Mentions: 5
Published: over 3 years ago

10.3390/microorganisms7080233

Antibiotic-Induced Perturbations Are Manifested in the Dominant Intestinal Bacterial Phyla of Atlantic Salmon
Cited by: 35
Author(s): S. R. Gupta, Jorge M.O. Fernandes, Viswanath Kiron
Software Mentions: 5
Published: over 5 years ago

10.3390/microorganisms9020229

Arbuscular Mycorrhizal Fungal Communities in the Soils of Desert Habitats
Cited by: 15
Author(s): Martti Vasar, John Davison, Siim‐Kaarel Sepp, Maarja Öpik, Mari Moora, Kadri Koorem, Yiming Meng, Jane Oja, Asem A. Akhmetzhanova, Saleh Al‐Quraishy, В. Г. Онипченко, Juan José Cantero, Sydney I. Glassman, Wael N. Hozzein, Martin Zobel
Software Mentions: 5
Published: almost 4 years ago

10.3389/fmicb.2019.01961

Sponges and Their Microbiomes Show Similar Community Metrics Across Impacted and Well-Preserved Reefs
Cited by: 19
Author(s): Marta Turon, Joan Cáliz, Xavier Triadó–Margarit, Emilio O. Casamayor, María Jesús Uriz
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0241231

A taxonomic and molecular survey of the pteridophytes of the Nectandra Cloud Forest Reserve, Costa Rica
Cited by: 7
Author(s): Joel H. Nitta, Atsushi Ebihara, Alan Р. Smith
Software Mentions: 5
Published: about 4 years ago

10.1371/journal.pone.0228880

Spatio-temporal variation of Cerambycidae-host tree interaction networks
Cited by: 8
Author(s): Michelle Ramos‐Robles, Orthon Ricardo Vargas‐Cardoso, Angélica María Corona‐López, Alejandro Flores‐Palacios, Víctor Hugo Toledo‐Hernández
Software Mentions: 5
Published: almost 5 years ago

10.1038/s41598-018-34619-w

A multiscale study of fungal endophyte communities of the foliar endosphere of native rubber trees in Eastern Amazon
Cited by: 28
Author(s): Aline B. M. Vaz, Paula Luize Camargos Fonseca, Fernanda Badotti, Demetra Skaltsas, Luiz Marcelo Ribeiro Tomé, Allefi C. Silva, Mayara C. Cunha, Marco A. Soares, Vera Lúcia dos Santos, Guilherme Oliveira, Priscilla Chaverri, Aristóteles Goés-Neto
Software Mentions: 5
Published: about 6 years ago

10.7717/peerj.1900

A comparison of species composition and community assemblage of secondary forests between the birch and pine-oak belts in the mid-altitude zone of the Qinling Mountains, China
Cited by: 13
Author(s): Zongzheng Chai, Dexiang Wang
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0224037

Foraging strategies are maintained despite workforce reduction: A multidisciplinary survey on the pollen collected by a social pollinator
Cited by: 26
Author(s): Paolo Biella, Nicola Tommasi, Asma Akter, Lorenzo Guzzetti, Jan Klečka, Anna Sandionigi, Massimo Labra, Andrea Galimberti
Software Mentions: 5
Published: about 5 years ago

10.1126/sciadv.aau4578

Fungal diversity regulates plant-soil feedbacks in temperate grassland
Cited by: 134
Author(s): Marina Semchenko, Jonathan W. Leff, Yudi M. Lozano, Sirgi Saar, John Davison, Anna Wilkinson, Benjamin G. Jackson, William J. Pritchard, Jonathan R. De Long, Simon Oakley, Kelly E. Mason, Nicholas J. Ostle, Elizabeth M. Baggs, David Johnson, Noah Fierer, Richard D. Bardgett
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pone.0226616

Insights into fungal diversity of a shallow-water hydrothermal vent field at Kueishan Island, Taiwan by culture-based and metabarcoding analyses
Cited by: 25
Author(s): Ka−Lai Pang, Sheng−Yu Guo, I-An Chen, Gaëtan Burgaud, Zengwei Luo, Hans-Uwe Dahms, Jiang‐Shiou Hwang, Yi-Li Lin, Jian-Shun Huang, Tsz-Wai Ho, Ling Ming Tsang, Michael Chiang, Hyojung Cha
Software Mentions: 5
Published: almost 5 years ago

10.1038/s41598-018-30157-7

Multi-marker metabarcoding approach to study mesozooplankton at basin scale
Cited by: 72
Author(s): Sérgio Stefanni, D Stanković, Diego Borme, Alessandra de Olazabal, Tea Juretić, Alberto Pallavicini, Valentina Tirelli
Software Mentions: 5
Published: over 6 years ago

10.1111/1365-2664.12371

Riparian reserves within oil palm plantations conserve logged forest leaf litter ant communities and maintain associated scavenging rates
Cited by: 36
Author(s): Claudia L. Gray, Owen T. Lewis, Arthur Y. C. Chung, Tom M. Fayle
Software Mentions: 4
Published: almost 10 years ago

10.3390/plants9010052

Changes in an Arbuscular Mycorrhizal Fungi Community Along an Environmental Gradient
Cited by: 29
Author(s): Larissa Vieira, Danielle Karla Alves da Silva, Indra Elena Costa Escobar, Julyana Maria da Silva, Ingrid Andrêssa de Moura, Fritz Oehl, Gladstone Alves da Silva
Software Mentions: 4
Published: almost 5 years ago

10.3390/v12090931

Tracking Community Timing: Pattern and Determinants of Seasonality in Culicoides (Diptera: Ceratopogonidae) in Northern Florida
Cited by: 8
Author(s): Agustín Quaglia, Erik M. Blosser, Bethany L. McGregor, Alfred E. Runkel, Kristin E. Sloyer, Dinesh Erram, Samantha M. Wisely, Nathan D. Burkett‐Cadena
Software Mentions: 4
Published: about 4 years ago

10.1002/ece3.7320

Deciphering the diet of a wandering spider ( Phoneutria boliviensis ; Araneae: Ctenidae) by DNA metabarcoding of gut contents
Cited by: 5
Author(s): Diego Sierra Ramírez, Giovany Guevara, Lida Marcela Franco Pérez, Arie van der Meijden, Julio César González‐Gómez, Juan Carlos Valenzuela‐Rojas, Carlos Fernando Prada Quiroga
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.6299

Interspecific comparison of the fecal microbiota structure in three Arctic migratory bird species
Cited by: 13
Author(s): Hyunjun Cho, Won Young Lee
Software Mentions: 4
Published: over 4 years ago

10.1007/s10858-020-00327-9

NMR quality control of fragment libraries for screening
Cited by: 18
Author(s): Sridhar Sreeramulu, Christian Richter, Till Kuehn, Kamal Azzaoui, Marcel J. J. Blommers, Rebecca Del Conte, Marco Fragai, Nils Trieloff, Peter Schmieder, Marc Nazaré, Edgar Specker, Vladimir N. Ivanov, Hartmut Oschkinat, Lucia Banci, Harald Schwalbe
Software Mentions: 4
Published: over 4 years ago

10.3390/jof7050335

Effect of Isolation Conditions on Diversity of Endolichenic Fungal Communities from a Foliose Lichen, Parmotrema tinctorum
Cited by: 10
Author(s): Ji Ho Yang, Seung‐Yoon Oh, Wonyong Kim, Jung-Jae Woo, Hyeonjae Kim, Jae‐Seoun Hur
Software Mentions: 4
Published: over 3 years ago

10.7717/peerj.9423

Highly diverse root endophyte bacterial community is driven by growth substrate and is plant genotype-independent in common bean (Phaseolus vulgaris L.)
Cited by: 10
Author(s): Aarón Barraza, Juan Carlos Vizuet-de-Rueda, Raúl Álvarez-Venegas
Software Mentions: 4
Published: over 4 years ago

10.1002/ece3.6687

High‐resolution multi‐marker DNA metabarcoding reveals sexual dietary differentiation in a bird with minor dimorphism
Cited by: 17
Author(s): Luís P. da Silva, Vanessa A. Mata, Pedro Lopes, Ricardo Lopes, Pedro Beja
Software Mentions: 4
Published: about 4 years ago

10.1098/rsos.191164

Persistent and substantial impacts of the Deepwater Horizon oil spill on deep-sea megafauna
Cited by: 23
Author(s): Craig R. McClain, Clifton C. Nunnally, Mark C. Benfield
Software Mentions: 4
Published: over 5 years ago

10.1128/mSphere.00088-19

Native and Invading Yellow Starthistle (Centaurea solstitialis) Microbiomes Differ in Composition and Diversity of Bacteria
Cited by: 18
Author(s): Patricia Lu‐Irving, Julia G. Harenčár, Hailey Sounart, Shana R. Welles, Sarah M. Swope, David A. Baltrus, Katrina M. Dlugosch
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2020.01931

Insights Into Subspecies Discrimination Potentiality From Bacteria MALDI-TOF Mass Spectra by Using Data Mining and Diversity Studies
Cited by: 10
Author(s): Audrey Giraud-Gatineau, Gaétan Texier, Éric Garnotel, Didier Raoult, Hervé Chaudet
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0219135

The menu varies with metabarcoding practices: A case study with the bat Plecotus auritus
Cited by: 28
Author(s): Tommy Andriollo, François Gillet, Johan Michaux, Manuel Rüedi
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-021-83153-9

Insufficient sampling constrains our characterization of plant microbiomes
Cited by: 11
Author(s): Lorinda Bullington, Ylva Lekberg, Beau Larkin
Software Mentions: 4
Published: almost 4 years ago

10.3389/fmicb.2016.00685

Concentration of Petroleum-Hydrocarbon Contamination Shapes Fungal Endophytic Community Structure in Plant Roots
Cited by: 20
Author(s): Guillaume Bourdel, Alice Roy‐Bolduc, Marc St‐Arnaud, Mohamed Hijri
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-021-99261-5

Severe vegetation degradation associated with different disturbance types in a poorly managed urban recreation destination in Iran
Cited by: 5
Author(s): Mohammad Bagher Erfanian, Juha M. Alatalo, Hamid Ejtehadi
Software Mentions: 4
Published: about 3 years ago

10.1371/journal.pone.0213008

Equal but different: Natural ecotones are dissimilar to anthropic edges
Cited by: 28
Author(s): Giselle Martins Lourenço, Glória Ramos Soares, Talita P. Santos, Wesley Dáttilo, André Victor Lucci Freitas, Sérvio Pontes Ribeiro
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0258207

A new phenothiazine derivate is active against Clostridioides difficile and shows low cytotoxicity
Cited by: 3
Author(s): Troels Ronco, Francisca Maria Aragao, Lasse Saaby, Jørn B. Christensen, A. Permin, Andrew R. Williams, Stig Milan Thamsborg, Rikke Heidemann Olsen
Software Mentions: 4
Published: about 3 years ago

10.3389/fmicb.2019.00708

Antimicrobial Resistance Diversity Suggestive of Distinct Salmonella Typhimurium Sources or Selective Pressures in Food-Production Animals
Cited by: 24
Author(s): Kate C. Mellor, Liljana Petrovska, Nicholas R. Thomson, Kate Harris, S. Reid, Alison E. Mather
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-020-73272-0

Climatic oscillations in Quaternary have shaped the co-evolutionary patterns between the Norway spruce and its host-associated herbivore
Cited by: 13
Author(s): Jakub Goczał, Andrzej Oleksa, Robert Rossa, Igor J. Chybicki, Katarzyna Meyza, Radosław Plewa, Matti Landvik, Mauro Gobbi, Gernot Hoch, Vytautas Tamutis, Maksims Balalaikins, Dmitry Telnov, Maria-Magdalena Dascălu, Adam Tofilski
Software Mentions: 4
Published: about 4 years ago

10.1002/ece3.5388

Plant community responses to environmentally friendly piste management in northeast Iran
Cited by: 10
Author(s): Mohammad Bagher Erfanian, Hamid Ejtehadi, Jamil Vaezi, Hamid Moazzeni, Farshid Memariani, Mohammad Firouz‐Jahantigh
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-020-59620-0

Complementary molecular methods reveal comprehensive phylogenetic diversity integrating inconspicuous lineages of early-diverged wood-decaying mushrooms
Cited by: 5
Author(s): Takashi Shirouzu, Shiro Matsuoka, Hideyuki Doi, Nobuaki Nagata, Masayuki Ushio, Kentaro Hosaka
Software Mentions: 4
Published: almost 5 years ago

10.1038/s41598-019-43325-0

Deep-sea benthic communities in the largest oceanic desert are structured by the presence of polymetallic crust
Cited by: 8
Author(s): Juliette Delavenne, Louise Keszler, Magalie Castelin, Pierre Livet, Philippe Maestrati, Sarah Samadi
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.3288

Marine dock pilings foster diverse, native cryptobenthic fish assemblages across bioregions
Cited by: 20
Author(s): Simon J. Brandl, Jordan M. Casey, Nancy Knowlton, J. Emmett Duffy
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-019-38795-1

Upper mesophotic depths in the coral reefs of Eilat, Red Sea, offer suitable refuge grounds for coral settlement
Cited by: 30
Author(s): Netanel Kramer, Gal Eyal, Raz Tamir, Yossi Loya
Software Mentions: 4
Published: almost 6 years ago

10.1038/s42003-021-01834-7

High resolution DNA barcode library for European butterflies reveals continental patterns of mitochondrial genetic diversity
Cited by: 51
Author(s): Vlad Dincă, Leonardo Dapporto, Panu Somervuo, Raluca Vodă, Sylvain Cuvelier, Martin Gascoigne‐Pees, Peter Huemer, Marko Mutanen, Paul D. N. Hebert, Roger Vila
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-018-30131-3

A four year survey reveals a coherent pattern between occurrence of fruit bodies and soil amoebae populations for nivicolous myxomycetes
Cited by: 18
Author(s): Mathilde Borg Dahl, Oleg N. Shchepin, Christian Schunk, Annette Menzel, Yu. K. Novozhilov, Martin Schnittler
Software Mentions: 4
Published: over 6 years ago

10.3389/fimmu.2015.00531

In-Depth Assessment of Within-Individual and Inter-Individual Variation in the B Cell Receptor Repertoire
Cited by: 70
Author(s): Jacob D. Galson, Johannes Trück, Anna Fowler, Márton Münz, Vincenzo Cerundolo, Andrew J. Pollard, Gerton Lunter, Dominic F. Kelly
Software Mentions: 4
Published: about 9 years ago

10.1002/ece3.1881

High richness of ectomycorrhizal fungi and low host specificity in a coastal sand dune ecosystem revealed by network analysis
Cited by: 21
Author(s): Alice Roy‐Bolduc, Étienne Laliberté, Mohamed Hijri
Software Mentions: 4
Published: almost 9 years ago

10.3389/fpls.2017.01465

Changes in Species Diversity Patterns and Spatial Heterogeneity during the Secondary Succession of Grassland Vegetation on the Loess Plateau, China
Cited by: 28
Author(s): Caili Sun, Zongzheng Chai, Guobin Liu, Sha Xue
Software Mentions: 4
Published: about 7 years ago

10.1038/s41398-020-01073-0

Enduring neurobehavioral effects induced by microbiota depletion during the adolescent period
Cited by: 35
Author(s): Gilliard Lach, Christine Fülling, Thomaz F.S. Bastiaanssen, Fiona Fouhy, Aoife Donovan, Ana Paula Ventura-Silva, Catherine Stanton, Timothy G. Dinan, John F. Cryan
Software Mentions: 4
Published: about 4 years ago

10.7554/eLife.38012

Mammal communities are larger and more diverse in moderately developed areas
Cited by: 45
Author(s): Arielle W. Parsons, Tavis Forrester, Megan C Baker-Whatton, William J. McShea, Christopher T. Rota, Stephanie G. Schuttler, Joshua J. Millspaugh, Roland Kays
Software Mentions: 4
Published: about 6 years ago

Projects: cran: iNEXT

Papers Mentioning iNEXT 235