cran: hyperSpec | Projects | Ecosyste.ms: Papers

10.3390/metabo9100200

The metaRbolomics Toolbox in Bioconductor and beyond
Cited by: 61
Author(s): Jan Stanstrup, Corey D. Broeckling, Rick Helmus, Nils Hoffmann, Ewy A. Mathé, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Michael Rainer, Reza M. Salek, Tobias Schulze, Emma L. Schymanski, Michael A. Stravs, Etienne Thévenot, Hendrik Treutler, Ralf Weber, Egon Willighagen, Michael Witting, Steffen Neumann
Software Mentions: 92
Published: about 5 years ago

10.1007/s00216-020-03093-7

Repeated double cross-validation applied to the PCA-LDA classification of SERS spectra: a case study with serum samples from hepatocellular carcinoma patients
Cited by: 23
Author(s): Elisa Gurian, Alessia Di Silvestre, Elisa Mitri, Devis Pascut, Claudio Tiribelli, Mauro Giuffrè, Lory Saveria Crocè, Valter Sergo, Alois Bonifacio
Software Mentions: 12
Published: about 4 years ago

10.1186/s40168-021-01054-5

A multi-OMIC characterisation of biodegradation and microbial community succession within the PET plastisphere
Cited by: 39
Author(s): Robyn J. Wright, Rafael Bosch, Morgan G. I. Langille, Matthew I. Gibson, Joseph Alexander Christie-Oleza
Software Mentions: 9
Published: over 3 years ago

10.3390/s20236723

Wide Field Spectral Imaging with Shifted Excitation Raman Difference Spectroscopy Using the Nod and Shuffle Technique
Cited by: 7
Author(s): Florian Korinth, Elmar Schmälzlin, Clara Stiebing, T. Urrutia, Genoveva Micheva, C. Sandín, André Müller, Bernd Sumpf, Christoph Krafft, G. Tränkle, Martin Roth, Jürgen Popp
Software Mentions: 8
Published: about 4 years ago

10.3389/fcell.2019.00141

Single Cell Imaging of Nuclear Architecture Changes
Cited by: 17
Author(s): Rikke Morrish, Michael Hermes, Jeremy Metz, Edwin M. Stone, Stefano Pagliara, Richard Chahwan, Francesca Palombo
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.pone.0243746

Image-based screen capturing misfolding status of Niemann-Pick type C1 identifies potential candidates for chaperone drugs
Cited by: 7
Author(s): Ryuta Shioi, Fumika Karaki, Hirosuke Yoshioka, Tomomi Noguchi‐Yachide, Minoru Ishikawa, Kosuke Dodo, Yuichi Hashimoto, Mikiko Sodeoka, Kenji Ohgane
Software Mentions: 6
Published: about 4 years ago

10.1371/journal.pone.0207380

Raman and infrared spectroscopy reveal that proliferating and quiescent human fibroblast cells age by biochemically similar but not identical processes
Cited by: 11
Author(s): Katharina Eberhardt, Christian Matthäus, Shiva Marthandan, Stephan Diekmann, Jürgen Popp
Software Mentions: 5
Published: about 6 years ago

10.3390/s17081724

Evaluation of Shifted Excitation Raman Difference Spectroscopy and Comparison to Computational Background Correction Methods Applied to Biochemical Raman Spectra
Cited by: 35
Author(s): Eliana Cordero, Florian Korinth, Clara Stiebing, Christoph Krafft, Iwan W. Schie, Jürgen Popp
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-020-67897-4

New methodology to process shifted excitation Raman difference spectroscopy data: a case study of pollen classification
Cited by: 15
Author(s): Florian Korinth, Abdullah Saif Mondol, Clara Stiebing, Iwan W. Schie, Christoph Krafft, Jürgen Popp
Software Mentions: 5
Published: over 4 years ago

10.1002/jbio.201960025

Bladder tissue characterization using probe‐based Raman spectroscopy: Evaluation of tissue heterogeneity and influence on the model prediction
Cited by: 19
Author(s): Eliana Cordero, Jan Rüger, Dominik Marti, Abdullah Saif Mondol, Thomas Hasselager, Karin Mogensen, Gregers G. Hermann, Jürgen Popp, Iwan W. Schie
Software Mentions: 5
Published: about 5 years ago

10.3390/ma10121365

Optimization and Characterization of Paper-Made Surface Enhanced Raman Scattering (SERS) Substrates with Au and Ag NPs for Quantitative Analysis
Cited by: 27
Author(s): Silvia Dalla Marta, Chiara Novara, Fabrizio Giorgis, Alois Bonifacio, Valter Sergo
Software Mentions: 4
Published: about 7 years ago

10.1038/s41598-020-71436-6

Changes in γH2AX and H4K16ac levels are involved in the biochemical response to a competitive soccer match in adolescent players
Cited by: 3
Author(s): Katarzyna Kozioł, Jacek Żebrowski, Gabriela Betlej, Ewelina Bator, Wojciech Czarny, Wojciech Bajorek, Bartłomiej Czarnota, Robert Czaja, Paweł Król, Aleksandra Kwiatkowska
Software Mentions: 4
Published: over 4 years ago

10.3389/fmicb.2019.03122

Understanding the Effects of High Pressure on Bacterial Spores Using Synchrotron Infrared Spectroscopy
Cited by: 23
Author(s): Chloé Modugno, Caroline Peltier, Hélène Simonin, Laurence Dujourdy, Francesco Capitani, Christophe Sandt, Jean-Marie Perrier-Cornet
Software Mentions: 3
Published: almost 5 years ago

10.3390/biomedicines9050580

Surface-Enhanced Raman Spectroscopy to Characterize Different Fractions of Extracellular Vesicles from Control and Prostate Cancer Patients
Cited by: 6
Author(s): Eric Boateng Osei, Liliia Paniushkina, Konrad Wilhelm, Jürgen Popp, Irina Nazarenko, Christoph Krafft
Software Mentions: 2
Published: over 3 years ago

10.3390/molecules25173857

FLIm and Raman Spectroscopy for Investigating Biochemical Changes of Bovine Pericardium upon Genipin Cross-Linking
Cited by: 6
Author(s): Tanveer Ahmed Shaik, Alba Alfonso‐Garcia, Martin Richter, Florian Korinth, Christoph Krafft, Laura Marcu, Jürgen Popp
Software Mentions: 2
Published: over 4 years ago

10.3390/ijms21165770

Exploring the Biochemical Origin of DNA Sequence Variation in Barley Plants Regenerated via in Vitro Anther Culture
Cited by: 13
Author(s): Piotr Tomasz Bednarek, Jacek Żebrowski, Renata Orłowska
Software Mentions: 2
Published: over 4 years ago

10.3390/jcm9082457

Danon Disease-Associated LAMP-2 Deficiency Drives Metabolic Signature Indicative of Mitochondrial Aging and Fibrosis in Cardiac Tissue and hiPSC-Derived Cardiomyocytes
Cited by: 11
Author(s): Giorgia Del Favero, Alois Bonifacio, Teisha J. Rowland, Shanshan Gao, Kunhua Song, Valter Sergo, Eric Adler, Luisa Mestroni, Orfeo Sbaizero, Matthew R.G. Taylor
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2020.00899

Biophysical Stress Responses of the Yeast Lachancea thermotolerans During Dehydration Using Synchrotron-FTIR Microspectroscopy
Cited by: 8
Author(s): Antonio A. Câmara, Thanh-Binh Nguyen, Rémi Saurel, Christophe Sandt, Caroline Peltier, Laurence Dujourdy, Florence Husson
Software Mentions: 2
Published: over 4 years ago

10.1021/acs.analchem.9b05658

Surface Enhanced Raman Spectroscopy for Quantitative Analysis: Results of a Large-Scale European Multi-Instrument Interlaboratory Study
Cited by: 43
Author(s): Stefano Fornasaro, Fatima Alsamad, Monica Baia, Luís A. E. Batista de Carvalho, Claudia Beleites, Hugh J. Byrne, Alessandro Chiadò, Mihaela Chiş, Malama Chisanga, Amuthachelvi Daniel, Jakub Dybaś, Gauthier Eppe, Guillaume Falgayrac, Karen Faulds, Hrvoje Gebavi, Fabrizio Giorgis, Royston Goodacre, Duncan Graham, Pietro La Manna, Stacey Laing, Lucio Litti, Fiona M. Lyng, Kamilla Malek, Cédric Malherbe, M. P. M. Marques, Moreno Meneghetti, Elisa Mitri, Vlasta Mohaček-Grošev, Cristina Cereda, Howbeer Muhamadali, Pellegrino Musto, Chiara Novara, Marianna Pannico, Guillaume Penel, Olivier Piot, Tomas Rindzevicius, Elena Rusu, Michael Schmidt, Valter Sergo, Ganesh D. Sockalingum, Valérie Untereiner, Renzo Vanna, Ewelina Wiercigroch, Alois Bonifacio
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0057291

New Insights on Cytological and Metabolic Features of Ostreopsis cf. ovata Fukuyo (Dinophyceae): A Multidisciplinary Approach
Cited by: 59
Author(s): Giorgio Honsell, Alois Bonifacio, Marco Bortoli, Antonella Penna, Cecilia Battocchi, Patrizia Ciminiello, Carmela Dell’Aversano, Ernesto Fattorusso, Silvio Sosa, Takeshi Yasumoto, Aurelia Tubaro
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0050162

Nature, Source and Function of Pigments in Tardigrades: In Vivo Raman Imaging of Carotenoids in Echiniscus blumi
Cited by: 16
Author(s): Alois Bonifacio, Roberto Guidetti, Tiziana Altiero, Valter Sergo, Lorena Rebecchi
Software Mentions: 1
Published: about 12 years ago

10.1038/srep23535

Simulated Raman correlation spectroscopy for quantifying nucleic acid-silver composites
Cited by: 15
Author(s): Lindsay Freeman, Alexei Smolyaninov, Lin Pang, Yeshaiahu Fainman
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-019-44117-2

The vertical distribution and biological transport of marine microplastics across the epipelagic and mesopelagic water column
Cited by: 292
Author(s): C. Anela Choy, Bruce H. Robison, Tyler Gagne, Benjamin Erwin, Evan Firl, Rolf U. Halden, J. A. Hamilton, Kakani Katija, Susan Lisin, Charles Rolsky, Kyle S. Van Houtan
Software Mentions: 1
Published: over 5 years ago

10.3233/BSI-130057

Synchrotron infrared imaging of advanced glycation endproducts (AGEs) in cardiac tissue from mice fed high glycemic diets
Cited by: 17
Author(s): Giovanni Birarda, Elizabeth A. Holman, Fei Shang, Karen A. Weikel, Ping Hu, Francis G. Blankenberg, Hoi-Ying N. Holman, Allen Taylor
Software Mentions: 1
Published: almost 12 years ago

Ecosyste.ms: Papers

Projects: cran: hyperSpec

Papers Mentioning hyperSpec 24