cran: glmnet | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0034157

Metabonomic Profiles Delineate the Effect of Traditional Chinese Medicine Sini Decoction on Myocardial Infarction in Rats
Cited by: 78
Author(s): Guangguo Tan, Wenting Liao, Xin Dong, Genjing Yang, Zhenyu Zhu, Wuhong Li, Yifeng Chai, Ziyang Lou
Software Mentions: 2
Published: over 14 years ago

10.1038/s41598-018-27563-2

Author Correction: Elastic net regularized regression for time-series analysis of plasma metabolome stability under sub-optimal freezing condition
Cited by: 1
Author(s): Gerard Bryan Gonzales, Sarah De Saeger
Software Mentions: 2
Published: about 8 years ago

10.1523/ENEURO.0441-19.2020

Signal Propagation via Open-Loop Intrathalamic Architectures: A Computational Model
Cited by: 8
Author(s): Jess Brown, Aynaz Taheri, Robert V. Kenyon, Tanya Y. Berger-Wolf, Daniel A. Llano
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-28805-z

Predicting global tuna vulnerabilities with spatial, economic, biological and climatic considerations
Cited by: 9
Author(s): Alex Tidd, Julia L. Blanchard, Laurence T. Kell, Reg Watson
Software Mentions: 2
Published: about 8 years ago

10.1186/s12874-019-0848-z

A comparison of machine learning techniques for classification of HIV patients with antiretroviral therapy-induced mitochondrial toxicity from those without mitochondrial toxicity
Cited by: 11
Author(s): Jong Soo Lee, Elijah Paintsil, Vivek Gopalakrishnan, Musie Ghebremichael
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-35277-8

The codon sequences predict protein lifetimes and other parameters of the protein life cycle in the mouse brain
Cited by: 17
Author(s): Sunit Mandad, Raza-Ur Rahman, Tonatiuh Peña Centeno, Ramón Vidal, Hanna Wildhagen, Burkhard Rammner, Sarva Keihani, Felipe Opazo, Inga Urban, Till Ischebeck, Koray Kırlı, Eva Benito, André Fischer, Roya Yousefi, Sven Dennerlein, Peter Rehling, Ivo Feußner, Henning Urlaub, Stefan Bonn, Silvio O. Rizzoli, Eugenio F. Fornasiero
Software Mentions: 2
Published: almost 8 years ago

10.3389/fnins.2012.00115

Discovery and replication of gene influences on brain structure using LASSO regression
Cited by: 89
Author(s): Omid Kohannim
Software Mentions: 2
Published: over 14 years ago

10.1038/s41598-018-36168-8

Genomic and regulatory characteristics of significant transcription factors in colorectal cancer metastasis
Cited by: 18
Author(s): Bin Zhou, Rui Guo
Software Mentions: 2
Published: over 7 years ago

10.1186/s12917-020-02352-0

MRI perfusion analysis using freeware, standard imaging software
Cited by: 1
Author(s): Antje Hartmann, Volkher B. Scholz, Ines E. Lautenschläger
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0203133

The proteomic and metabolomic characterization of exercise-induced sweat for human performance monitoring: A pilot investigation
Cited by: 31
Author(s): Sean W. Harshman, Rhonda L. Pitsch, Zachary K Smith, Maegan L. O’Connor, Brian Geier, Anthony Qualley, Nicole M. Schaeublin, Molly Voelz Fischer, Jason J. Eckerle, Adam J. Strang, Jennifer A. Martin
Software Mentions: 2
Published: almost 8 years ago

10.1186/1471-2105-14-S12-S1

Using context-specific effect of miRNAs to identify functional associations between miRNAs and gene signatures
Cited by: 46
Author(s): Mohammed Alshalalfa, Reda Alhajj
Software Mentions: 2
Published: almost 13 years ago

10.1186/s13075-019-1996-6

Pneumocystis pneumonia in patients with rheumatic diseases receiving prolonged, non-high-dose steroids—clinical implication of primary prophylaxis using trimethoprim–sulfamethoxazole
Cited by: 48
Author(s): Jung Won Park, Jeffrey R. Curtis, Min Jung Kim, Eun Bong Lee, Yeong Wook Song, Eun Bong Lee
Software Mentions: 2
Published: almost 7 years ago

10.1177/2040206618762985

Frequent cross-resistance to rilpivirine among subtype C HIV-1 from first-line antiretroviral therapy failures in South Africa
Cited by: 5
Author(s): Kerri J. Penrose, Chanson J. Brumme, Maritsa Scoulos-Hanson, Kristen A. Hamanishi, Kelley C. Gordon, Raquel Viana, Carole L. Wallis, P. Richard Harrigan, John W. Mellors, Urvi M. Parikh
Software Mentions: 2
Published: over 8 years ago

10.3390/antiox10071043

Lipid Peroxidation Assessment in Preclinical Alzheimer Disease Diagnosis
Cited by: 12
Author(s): Carmen Peña-Bautista, Lourdes Álvarez-Sánchez, I. Ferrer, Marina López-Nogueroles, Antonio José Cañada-Martínez, Camille Oger, Jean‐Marie Galano, Thierry Durand, Miquel Baquero, Consuelo Cháfer-Pericás
Software Mentions: 2
Published: about 5 years ago

10.1155/2019/9507193

Cloud-Based Brain Magnetic Resonance Image Segmentation and Parcellation System for Individualized Prediction of Cognitive Worsening
Cited by: 4
Author(s): Ryo Sakamoto, Christopher Marano, Michael I. Miller, Constantine G. Lyketsos, Yue Li, Susumu Mori, Kenichi Oishi, Alzheimer's Disease Neuroimaging Initiative ADNI
Software Mentions: 2
Published: over 7 years ago

10.18632/oncotarget.10975

The 3′UTR signature defines a highly metastatic subgroup of triple-negative breast cancer
Cited by: 25
Author(s): Lei Wang, Xin Hu, Peng Wang, Zhi Ming Shao
Software Mentions: 2
Published: about 10 years ago

10.1080/07853890.2020.1868564

Clinical and inflammatory features based machine learning model for fatal risk prediction of hospitalized COVID-19 patients: results from a retrospective cohort study
Cited by: 84
Author(s): Xin Guan, Bo Zhang, Ming Fu, Mengying Li, Yuan Xu, Yaowu Zhu, Jing Peng, Huan Guo, Yanjun Lu
Software Mentions: 2
Published: over 5 years ago

10.1002/acn3.51016

Self‐reported rates of impulsivity in Parkinson’s Disease
Cited by: 9
Author(s): Megan Aumann, Adam Stark, Shelby Hughes, Ya Chen Lin, Hakmook Kang, Elise Bradley, David H. Zald, Daniel O. Claassen
Software Mentions: 2
Published: over 6 years ago

10.2196/22060

Association Between Public Knowledge About COVID-19, Trust in Information Sources, and Adherence to Social Distancing: Cross-Sectional Survey
Cited by: 156
Author(s): Ilona Fridman, Nicole Lucas, Debra Henke, Christina K. Zigler
Software Mentions: 2
Published: almost 6 years ago

10.18632/aging.102064

Integrated tumor stromal features of hepatocellular carcinoma reveals two distinct subtypes with prognostic/predictive significance
Cited by: 4
Author(s): Wei Li, Jun Han, Kefei Yuan, Hong Wu
Software Mentions: 2
Published: about 7 years ago

10.3390/ijerph17239027

Interaction Effects of Air Pollution and Climatic Factors on Circulatory and Respiratory Mortality in Xi’an, China between 2014 and 2016
Cited by: 11
Author(s): Kingsley Katleho Mokoena, Crystal Jane Ethan, Yan Yu, Asenso Theophilus Quachie
Software Mentions: 2
Published: over 5 years ago

10.3389/fonc.2020.00028

Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma
Cited by: 50
Author(s): Daojun Hong, Ke Xu, Lina Zhang, Xiaoting Wan, Yan Guo
Software Mentions: 2
Published: over 6 years ago

10.3389/fendo.2021.647610

A Predictive Nomogram for Red Blood Cell Transfusion in Pheochromocytoma Surgery: A Study on Improving the Preoperative Management of Pheochromocytoma
Cited by: 5
Author(s): Ying Guo, Lili You, Huijun Hu, Anli Tong, Xiaoyun Zhang, Li Yan, Shaoling Zhang
Software Mentions: 2
Published: over 5 years ago

10.3389/fncom.2020.605104

Predicting Grating Orientations With Cross-Frequency Coupling and Least Absolute Shrinkage and Selection Operator in V1 and V4 of Rhesus Monkeys
Cited by: 1
Author(s): Zhaohui Li, Yixuan Du, Youben Xiao, Liyong Yin
Software Mentions: 2
Published: over 5 years ago

10.2196/mhealth.9236

Development and Evaluation of a Mobile Personalized Blood Glucose Prediction System for Patients With Gestational Diabetes Mellitus
Cited by: 35
Author(s): Evgenii Pustozerov, Polina Popova, Aleksandra Tkachuk, Yana Bolotko, Z. M. Yuldashev, Elena Grineva
Software Mentions: 2
Published: over 8 years ago

10.3389/fcimb.2017.00457

Application of ImmunoScore Model for the Differentiation between Active Tuberculosis and Latent Tuberculosis Infection as Well as Monitoring Anti-tuberculosis Therapy
Cited by: 15
Author(s): Yu Zhou, Juan Du, Hongyan Hou, Yanfang Lu, Jing Yu, Mao L, Wang Feng, Ziyong Sun
Software Mentions: 2
Published: almost 9 years ago

10.2196/16733

Prediction Model for Timing of Death in Potential Donors After Circulatory Death (DCD III): Protocol for a Multicenter Prospective Observational Cohort Study
Cited by: 3
Author(s): Angela M M Kotsopoulos, Piet Vos, Nichon Jansen, Ewald M. Bronkhorst, Johannes G. van der Hoeven, Wilson F. Abdo
Software Mentions: 2
Published: about 6 years ago

10.3389/fonc.2021.628982

Prognostic Value of Pre-Treatment CT Radiomics and Clinical Factors for the Overall Survival of Advanced (IIIB–IV) Lung Adenocarcinoma Patients
Cited by: 9
Author(s): Daojun Hong, Lina Zhang, Ke Xu, Xiaoting Wan, Yan Guo
Software Mentions: 2
Published: about 5 years ago

10.3389/fcell.2021.685379

An Aging-Related Gene Signature-Based Model for Risk Stratification and Prognosis Prediction in Lung Adenocarcinoma
Cited by: 25
Author(s): Qian Xu, Yurong Chen
Software Mentions: 2
Published: about 5 years ago

10.3389/fcvm.2020.603621

Estimation of Major Adverse Cardiovascular Events in Patients With Myocardial Infarction Undergoing Primary Percutaneous Coronary Intervention: A Risk Prediction Score Model From a Derivation and Validation Study
Cited by: 6
Author(s): Xiaoxiao Zhao, Chen Liu, Peng Zhou, Zhaoxue Sheng, Jiannan Li, Jinying Zhou, Runzhen Chen, Ying Wang, Yi Chen, Li Song, Hanjun Zhao, Hongbing Yan
Software Mentions: 2
Published: over 5 years ago

10.3389/fcvm.2021.696763

Therapeutic Decision-Making and Outcomes in Elderly Patients With Severe Symptomatic Aortic Stenosis: Prognostic Implications of Elderly Patients' Initial Decisions
Cited by: 2
Author(s): Qinghao Zhao, Haiyan Xu, Qingrong Liu, Yunqing Ye, Bin Zhang, Zhe Li, Runlin Gao, Yongjian Wu
Software Mentions: 2
Published: about 5 years ago

10.3389/fonc.2018.00296

Prostate-Specific Antigen Trends Predict the Probability of Prostate Cancer in a Very Large U.S. Veterans Affairs Cohort
Cited by: 5
Author(s): R. Jeffrey Karnes, F. Roy MacKintosh, Christopher H. Morrell, Lori Rawson, Preston Sprenkle, Michael W. Kattan, Michele Colicchia, Thomas Neville
Software Mentions: 2
Published: about 8 years ago

10.1186/s40425-016-0179-0

Validation of biomarkers to predict response to immunotherapy in cancer: Volume II — clinical validation and regulatory considerations
Cited by: 85
Author(s): Kevin K. Dobbin, Alessandra Cesano, John Alvarez, Rachael E. Hawtin, Sylvia Janetzki, Ilan R. Kirsch, Giuseppe Masucci, Paul B. Robbins, Senthamil R. Selvan, Howard Streicher, Jenny Zhang, Lisa H. Butterfield, Magdalena Thurin
Software Mentions: 2
Published: almost 10 years ago

10.1186/s40425-019-0752-4

Development and validation of an immune checkpoint-based signature to predict prognosis in nasopharyngeal carcinoma using computational pathology analysis
Cited by: 40
Author(s): Yaqin Wang, Yu Zhang, Wei Jiang, Yu-Pei Chen, Shuoyu Xu, Na Liu, Yin Zhao, Li Li, Yuan Liu, Xiao-Hong Hong, Ye‐Lin Liang, Junyan Li, Lulu Zhang, Jing‐Ping Yun, Ying Sun, Ying‐Qin Li, Jun Ma
Software Mentions: 2
Published: almost 7 years ago

10.1186/s13195-019-0502-3

Electrophysiological brain signatures for the classification of subjective cognitive decline: towards an individual detection in the preclinical stages of dementia
Cited by: 21
Author(s): David López‐Sanz, Ricardo Bruña, María Luisa Delgado-Losada, Ramón López-Higes, Alberto Marcos-Dolado, Fernando Maestú, Stefan Walter
Software Mentions: 2
Published: about 7 years ago

10.3390/foods5030052

Applying Least Absolute Shrinkage Selection Operator and Akaike Information Criterion Analysis to Find the Best Multiple Linear Regression Models between Climate Indices and Components of Cow’s Milk
Cited by: 10
Author(s): Mohammad Milani, Andreas Hense, Elham Rahmani, Angelika Ploeger
Software Mentions: 2
Published: about 10 years ago

10.1002/2211-5463.12592

A risk score model for the prediction of osteosarcoma metastasis
Cited by: 29
Author(s): Siqi Dong, Hongjun Huo, Yu Mao, Xin Li, Dong Liu
Software Mentions: 2
Published: over 7 years ago

10.1002/2211-5463.12687

Identification of potential diagnostic biomarkers for Parkinson's disease
Cited by: 34
Author(s): Jiang Feng-hua, Qianqian Wu, Shumin Sun, Guang-Hui Bi, Ling Guo
Software Mentions: 2
Published: about 7 years ago

10.1186/s13195-018-0397-4

Alzheimer disease pathology and the cerebrospinal fluid proteome
Cited by: 61
Author(s): Loı̈c Dayon, Antonio Núñez Galindo, Jérôme Wojcik, Ornella Cominetti, John Corthésy, Aikaterini Oikonomidi, Hugues Henry, Martin Kussmann, Eugenia Migliavacca, India C. Severin, Gene L. Bowman, Julius Popp
Software Mentions: 2
Published: about 8 years ago

10.1111/eva.13195

An epigenetic clock to estimate the age of living beluga whales
Cited by: 25
Author(s): Eleanor K. Bors, C. Scott Baker, Paul R. Wade, Kaimyn B. O'Neill, Kim E. W. Shelden, Michael J. Thompson, Zhe Fei, Simon Jarman, Steve Horvath
Software Mentions: 2
Published: over 5 years ago

10.1155/2017/9180159

Modification of the Integrated Sasang Constitutional Diagnostic Model
Cited by: 4
Author(s): Jin Hyun Nam, Jun-Su Jang, Honggie Kim, Jong Yeol Kim, Jun-Hyeong Do
Software Mentions: 2
Published: over 9 years ago

10.1155/2019/5303869

Study of the Gastrointestinal Heat Retention Syndrome in Children: From Diagnostic Model to Biological Basis
Cited by: 3
Author(s): Xueyan Ma, Chencheng Mei, Ling Huang, Chen Bai, Jingnan Xu, Yuxiang Wan, Jianhua Zhen, Zhuo Li, Lijun Cui, Shaoyang Liu, Tiegang Liu, Yu He, Xiaohong Gu
Software Mentions: 2
Published: over 6 years ago

10.1080/20008198.2017.1344079

Does trauma event type matter in the assessment of traumatic load?
Cited by: 27
Author(s): Daniela Conrad, Sarah Wilker, Anett Pfeiffer, Birke Lingenfelder, Tracie Ebalu, Hartmut Lanzinger, Thomas Elbert, Iris‐Tatjana Kolassa, Stephan Kolassa
Software Mentions: 2
Published: over 9 years ago

10.1007/s00259-019-04495-1

Prediction of outcome in anal squamous cell carcinoma using radiomic feature analysis of pre-treatment FDG PET-CT
Cited by: 35
Author(s): Peter Brown, Jim Zhong, Russell Frood, Stuart Currie, Alexandra Gilbert, Ane L Appelt, David Sebag‐Montefiore, Andrew Scarsbrook
Software Mentions: 2
Published: almost 7 years ago

10.3389/fonc.2021.708784

An Immune-Clinical Prognostic Index (ICPI) for Patients With De Novo Follicular Lymphoma Treated With R-CHOP/CHOP Chemotherapy
Cited by: 3
Author(s): Yaxiao Lu, Jingwei Yu, Wenchen Gong, Liping Su, Xiuhua Sun, Ou Bai, Hui Zhou, Xue Guan, Tingting Zhang, Lanfang Li, Lihua Qiu, Qian Zheng, Shunhua Zhou, Bin Meng, Xiubao Ren, Linyu Li, Huilai Zhang
Software Mentions: 2
Published: about 5 years ago

10.1093/ehjcvp/pvz071

An observational study of international normalized ratio control according to NICE criteria in patients with non-valvular atrial fibrillation: the SAIL Warfarin Out of Range Descriptors Study (SWORDS)
Cited by: 8
Author(s): Daniel Harris, Daniel Thayer, Ting Wang, Caroline Brooks, Geoffrey Murley, Michael B. Gravenor, Nathan R. Hill, Steven Lister, Julian Halcox
Software Mentions: 2
Published: over 6 years ago

10.1007/s00787-019-01393-7

Spontaneous discontinuation of distressing auditory verbal hallucinations in a school-based sample of adolescents: a longitudinal study
Cited by: 5
Author(s): Vera Brink, Catheleine van Driel, Saliha el Bouhaddani, Klaas J. Wardenaar, Lieke van Domburgh, Barbara A. Schaefer, Marije van Beilen, Agna A. Bartels-Velthuis, Wim Veling
Software Mentions: 2
Published: almost 7 years ago

10.3389/fonc.2020.551255

A New Model for Predicting Hypothyroidism After Intensity-Modulated Radiotherapy for Nasopharyngeal Carcinoma
Cited by: 10
Author(s): Liang Peng, Yan‐Ping Mao, Cheng‐Long Huang, Rui Guo, Jun Ma, Wen Wang, Ling-Long Tang
Software Mentions: 2
Published: almost 6 years ago

10.1289/ehp.1408933

Prenatal Phthalate, Perfluoroalkyl Acid, and Organochlorine Exposures and Term Birth Weight in Three Birth Cohorts: Multi-Pollutant Models Based on Elastic Net Regression
Cited by: 167
Author(s): Virissa Lenters, Lützen Portengen, Anna Rignell-Hydbom, Bo Jönsson, Christian Lindh, Aldert H. Piersma, Gunnar Toft, Jens Peter Bonde, Dick Heederik, Lars Rylander, Roel Vermeulen
Software Mentions: 2
Published: over 10 years ago

10.1289/ehp.1307287

Characterizing Spatial Patterns of Airborne Coarse Particulate (PM <sub>10–2.5</sub> ) Mass and Chemical Components in Three Cities: The Multi-Ethnic Study of Atherosclerosis
Cited by: 30
Author(s): Kai Zhang, Timothy V. Larson, Amanda Gassett, Adam A. Szpiro, Martha L. Daviglus, Gregory L. Burke, Joel D. Kaufman, Sara D. Adar
Software Mentions: 2
Published: about 12 years ago

10.18632/aging.101563

A new risk score based on twelve hepatocellular carcinoma-specific gene expression can predict the patients’ prognosis
Cited by: 18
Author(s): Ting Lin, Jingxian Gu, Kai Qu, Xing Zhang, Xiaojie Ma, Runchen Miao, Xiaohong Xiang, Yunong Fu, Wenquan Niu, Junjun She, Chang Liu
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12940-018-0445-3

Prenatal exposure to perfluoroalkyl and polyfluoroalkyl substances and the risk of hypertensive disorders of pregnancy
Cited by: 73
Author(s): Rong Huang, Qian Chen, Lin Zhang, Kai Luo, Lin Chen, Shasha Zhao, Liping Feng, Jun Zhang
Software Mentions: 2
Published: over 7 years ago

10.3390/e23040434

Dynamic Analyses of Contagion Risk and Module Evolution on the SSE A-Shares Market Based on Minimum Information Entropy
Cited by: 7
Author(s): Muzi Chen, Yuhang Wang, Boyao Wu, Duo Huang
Software Mentions: 2
Published: over 5 years ago

10.1038/s41389-017-0015-5

Src-mediated regulation of the PI3K pathway in advanced papillary and anaplastic thyroid cancer
Cited by: 33
Author(s): Thomas C. Beadnell, Kelsey W. Nassar, Madison Rose, Erin G. Clark, Brian P. Danysh, Marie‐Claude Hofmann, Nikita Pozdeyev, Rebecca E. Schweppe
Software Mentions: 2
Published: over 8 years ago

10.3390/e23030324

Ensemble Linear Subspace Analysis of High-Dimensional Data
Cited by: 3
Author(s): Shakeel Ahmed, Saeid Amiri, Kjell A. Doksum
Software Mentions: 2
Published: over 5 years ago

10.1186/s13195-017-0270-x

One-carbon metabolism, cognitive impairment and CSF measures of Alzheimer pathology: homocysteine and beyond
Cited by: 46
Author(s): Loı̈c Dayon, Seu Ping Guiraud, John Corthésy, Laeticia Da Silva, Eugenia Migliavacca, Domilė Tautvydaitė, Aikaterini Oikonomidi, Barbara Moullet, Hugues Henry, Sylviane Métairon, Julien Marquis, Patrick Descombes, Sebastiano Collino, François-Pierre Martin, Ivan Montoliu, Martin Kussmann, Jérôme Wojcik, Gene L. Bowman, Julius Popp
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0231609

Cytokine changes associated with the maternal immune activation (MIA) model of autism: A penalized regression approach
Cited by: 14
Author(s): Cristina Paraschivescu, Susana Barbosa, Thomas Lorivel, Nicolas Glaichenhaus, Laetitia Davidovic
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0193871

Radiogenomics analysis identifies correlations of digital mammography with clinical molecular signatures in breast cancer
Cited by: 13
Author(s): Jose-Gerardo Tamez-Peña, Juan-Andrés Rodriguez-Rojas, Hugo Gómez-Rueda, Jose-Maria Celaya-Padilla, Roxana-Alicia Rivera-Prieto, Rebeca Palacios-Corona, Margarita Garza-Montemayor, Servando Cardona‐Huerta, Víctor Treviño
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0068071

Bayesian Mixture Models for Assessment of Gene Differential Behaviour and Prediction of pCR through the Integration of Copy Number and Gene Expression Data
Cited by: 0
Author(s): Filippo Trentini, Yuan Ji, Takayuki Inomata, Yuan Qi, Lajos Pusztai, Peter Müller
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0065380

Effects of Sample Size on Differential Gene Expression, Rank Order and Prediction Accuracy of a Gene Signature
Cited by: 46
Author(s): Cynthia Stretch, Sumsullah Khan, Nasimeh Asgarian, Roman Eisner, Saman Vaisipour, Sambasivarao Damaraju, Kathryn Graham, Oliver F. Bathe, Helen Steed, Russell Greiner, Vickie E. Baracos
Software Mentions: 2
Published: about 13 years ago

10.1111/acel.13149

Determinants of accelerated metabolomic and epigenetic aging in a UK cohort
Cited by: 79
Author(s): Oliver Robinson, Marc Chadeau‐Hyam, Íbrahím Karaman, Rui Pinto, Mika Ala‐Korpela, Evangelos Handakas, Giovanni Fiorito, He Gao, Andy Heard, Marjo‐Riitta Järvelin, Matthew R. Lewis, Raha Pazoki, Silvia Polidoro, Ioanna Tzoulaki, Matthias Wielscher, Paul Elliott, Paolo Víneis
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0205333

Factors associated with common mental health problems of humanitarian workers in South Sudan
Cited by: 25
Author(s): Hannah Strohmeier, Willem F. Scholte, Alastair Ager
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0218134

Selection and co-selection of antibiotic resistances among Escherichia coli by antibiotic use in primary care: An ecological analysis
Cited by: 32
Author(s): Koen B Pouwels, Berit Müller‐Pebody, Timo Smieszek, Susan Hopkins, Julie V. Robotham
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0029653

Expression Signature of IFN/STAT1 Signaling Genes Predicts Poor Survival Outcome in Glioblastoma Multiforme in a Subtype-Specific Manner
Cited by: 109
Author(s): Christine W. Duarte, Christopher D. Willey, Degui Zhi, Xiangqin Cui, Jacqueline J. Harris, Laura K. Vaughan, Tapan Mehta, Raymond O. McCubrey, Nikolai N. Khodarev, Ralph R. Weichselbaum, G. Yancey Gillespie
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0110451

Discovering Main Genetic Interactions with LABNet LAsso-Based Network Inference
Cited by: 4
Author(s): Francesco Gadaleta, Kristel Van Steen
Software Mentions: 2
Published: almost 12 years ago

10.1111/acel.12687

Age-associated microRNA expression in human peripheral blood is associated with all-cause mortality and age-related traits
Cited by: 104
Author(s): Tianxiao Huan, George Chen, Chunyu Liu, Anindya Bhattacharya, Jian Rong, Brian H. Chen, Sudha Seshadri, Kahraman Tanrıverdi, Jane E. Freedman, Martin G. Larson, Joanne M. Murabito, Daniel Levy
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0027683

Potential Biomarkers in Mouse Myocardium of Doxorubicin-Induced Cardiomyopathy: A Metabonomic Method and Its Application
Cited by: 59
Author(s): Guangguo Tan, Ziyang Lou, Wenting Liao, Zhenyu Zhu, Xin Dong, Wei Zhang, Wuhong Li, Yifeng Chai
Software Mentions: 2
Published: almost 15 years ago

10.1371/journal.pone.0146939

Characterization of Bacterial Communities in Selected Smokeless Tobacco Products Using 16S rDNA Analysis
Cited by: 49
Author(s): Robert E. Tyx, Stephen B. Stanfill, Lisa M. Keong, Aidsa Rivera, Glen A. Satten, Clifford H. Watson
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0148195

Fusing Data Mining, Machine Learning and Traditional Statistics to Detect Biomarkers Associated with Depression
Cited by: 56
Author(s): Joanna F. Dipnall, Julie A. Pasco, Michael Berk, Lana J. Williams, Seetal Dodd, Felice N. Jacka, Denny Meyer
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0227315

Radiomics signature for prediction of lateral lymph node metastasis in conventional papillary thyroid carcinoma
Cited by: 29
Author(s): Vivian Youngjean Park, Kyunghwa Han, Hye Jung Kim, Eun Jung Lee, Ji Hyun Youk, Min Jung Kim, Hee Jung Moon, Jung Hyun Yoon, Jin Young Kwak
Software Mentions: 2
Published: over 6 years ago

10.3389/fonc.2020.01416

Radiomics Nomogram for Prediction of Peritoneal Metastasis in Patients With Gastric Cancer
Cited by: 19
Author(s): Weicai Huang, Kangneng Zhou, Yuming Jiang, Chuanli Chen, Qingyu Yuan, Zhen Han, Jingjing Xie, Shitong Yu, Zhiwei Sun, Yanfeng Hu, Jiang Yu, Hao Liu, Ruoxiu Xiao, Yu Xu, Zhiwei Zhou, Guoxin Li
Software Mentions: 2
Published: almost 6 years ago

10.3389/fonc.2021.652040

Development of a tRNA-Derived Small RNA Prognostic Panel and Their Potential Functions in Osteosarcoma
Cited by: 1
Author(s): Zhenming Tang, Shuhui Zhang, Zhougui Ling
Software Mentions: 2
Published: about 5 years ago

10.1016/j.addbeh.2018.02.017

Problematic internet use as an age-related multifaceted problem: Evidence from a two-site survey
Cited by: 124
Author(s): Konstantinos Ioannidis, Matthias S. Treder, Samuel R. Chamberlain, Franz J. Király, Sarah A. Redden, Dan J. Stein, Christine Löchner, Jon E. Grant
Software Mentions: 2
Published: about 8 years ago

10.1111/acel.13256

Data mining of human plasma proteins generates a multitude of highly predictive aging clocks that reflect different aspects of aging
Cited by: 47
Author(s): Benoit Lehallier, Maxim N. Shokhirev, Tony Wyss‐Coray, Adiv A. Johnson
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0196038

Classification-driven framework to predict maize hybrid field performance from metabolic profiles of young parental roots
Cited by: 2
Author(s): Francisco de Abreu e Lima, Lothar Willmitzer, Zoran Nikoloski
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0213258

Exploring the use of machine learning for risk adjustment: A comparison of standard and penalized linear regression models in predicting health care costs in older adults
Cited by: 37
Author(s): Hong Kan, Hadi Kharrazi, Hsien Yen Chang, Dave Bodycombe, K Lemke, Jonathan P. Weiner
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0160715

Biophysical Mechanistic Modelling Quantifies the Effects of Plant Traits on Fire Severity: Species, Not Surface Fuel Loads, Determine Flame Dimensions in Eucalypt Forests
Cited by: 85
Author(s): Philip Zylstra, Ross A. Bradstock, Michael Bedward, Trent D. Penman, Michael Doherty, R. O. Weber, A. Malcolm Gill, Geoffrey J. Cary
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0241083

Predicting overdose among individuals prescribed opioids using routinely collected healthcare utilization data
Cited by: 7
Author(s): Jenny W Sun, Jessica M. Franklin, Kathryn Rough, Rishi Desai, Sonia Hernández–Dı́az, Krista F. Huybrechts, Brian T. Bateman
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0250198

Characteristics of spirochetemic patients with a solitary erythema migrans skin lesion in Europe
Cited by: 3
Author(s): Vera Maraspin, Katarina Ogrinc, Tereza Rojko, Petra Bogovič, Eva Ružić‐Sabljić, Andrej Kastrin, Gary P. Wormser, Franc Strle
Software Mentions: 2
Published: over 5 years ago

10.1007/s10461-016-1404-z

Predictors of Infant Age at Enrollment in Early Infant Diagnosis Services in Kenya
Cited by: 27
Author(s): Kathy Goggin, Catherine Wexler, Niaman Nazir, Vincent S. Staggs, Brad Gautney, Vincent Okoth, Samoel Khamadi, Andrea Ruff, Michael D. Sweat, An Lin Cheng, Sarah Finocchario-Kessler
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0160733

Evaluating Imputation Algorithms for Low-Depth Genotyping-By-Sequencing (GBS) Data
Cited by: 31
Author(s): A. M. C. Chan, Martha T. Hamblin, Jean‐Luc Jannink
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0248746

Gene flow in commercial alfalfa (Medicago sativa subsp. sativa L.) seed production fields: Distance is the primary but not the sole influence on adventitious presence
Cited by: 6
Author(s): Sandya R. Kesoju, Matthew Kramer, Johanne Brunet, Stephanie L. Greene, Amelia Jordan, Ruth C. Martin
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0072199

Measuring Visual Field Progression in the Central 10 Degrees Using Additional Information from Central 24 Degrees Visual Fields and ‘Lasso Regression’
Cited by: 17
Author(s): Ryo Asaoka
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0236957

A simple nomogram score for screening patients with type 2 diabetes to detect those with hypertension: A cross-sectional study based on a large community survey in China
Cited by: 7
Author(s): Mingyue Xue, Li Liu, Shuxia Wang, Yinxia Su, Kun Lv, Mingchen Zhang, Hua Yao
Software Mentions: 2
Published: about 6 years ago

10.3389/fonc.2021.666826

Integrated Analysis of Cell Cycle–Related and Immunity-Related Biomarker Signatures to Improve the Prognosis Prediction of Lung Adenocarcinoma
Cited by: 14
Author(s): Fangyu Chen, Jiahang Song, Ziqi Ye, Bing Xu, Hongyan Cheng, Shu Zhang, Xinchen Sun
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0150744

A Cross-Sectional Study of Water, Sanitation, and Hygiene-Related Risk Factors for Soil-Transmitted Helminth Infection in Urban School- and Preschool-Aged Children in Kibera, Nairobi
Cited by: 47
Author(s): Caitlin M. Worrell, Ryan E. Wiegand, Stephanie M. Davis, Kennedy Odero, Anna J. Blackstock, Victoria M. Cuéllar, Sammy M. Njenga, Joel M. Montgomery, Sharon L. Roy, LeAnne M. Fox
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0062471

FDG PET and MRI in Logopenic Primary Progressive Aphasia versus Dementia of the Alzheimer’s Type
Cited by: 96
Author(s): Ajay A Madhavan, Jennifer L. Whitwell, Stephen D. Weigand, Joseph R. Duffy, Edythe A. Strand, Mary M. Machulda, Nirubol Tosakulwong, Matthew L. Senjem, Jeffrey L. Gunter, Val J. Lowe, Ronald C. Petersen, Clifford R. Jack, Keith A. Josephs
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0123946

Developing a Prognostic Micro-RNA Signature for Human Cervical Carcinoma
Cited by: 31
Author(s): Christine How, Melania Pintilie, Jeff Bruce, Angela Bik‐Yu Hui, Blaise A. Clarke, Philip Wong, Shaoming Yin, Rui Yan, Daryl Waggott, Paul C. Boutros, Anthony Fyles, David W. Hedley, Richard P. Hill, Michael Milosevic, Fei‐Fei Liu
Software Mentions: 2
Published: over 11 years ago

10.3389/fonc.2020.598253

Development and Validation of a Radiomic-Based Model for Prediction of Intrahepatic Cholangiocarcinoma in Patients With Intrahepatic Lithiasis Complicated by Imagologically Diagnosed Mass
Cited by: 11
Author(s): Beihui Xue, Sunjie Wu, Ming‐Hua Zheng, Huanchang Jiang, Jun Chen, Zhaoqiang Jiang, Tian Tian, Yifan Tu, Hongxin Zhao, Xian Shen, Kuvaneshan Ramen, Ximei Wu, Qiyu Zhang, Qian Zeng, Xiujuan Zheng
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0154313

Molecular Predictors of Long-Term Survival in Glioblastoma Multiforme Patients
Cited by: 39
Author(s): Jie Lü, Matthew C. Cowperthwaite, Mark G. Burnett, Max Shpak
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0114885

Computational Pathology to Discriminate Benign from Malignant Intraductal Proliferations of the Breast
Cited by: 107
Author(s): Fei Dong, Humayun Irshad, Eunsun Oh, Melinda F. Lerwill, Elena F. Brachtel, Nicholas Jones, Nicholas W. Knoblauch, Laleh Montaser‐Kouhsari, Nicole B. Johnson, Luigi Rao, Beverly E. Faulkner-Jones, David C. Wilbur, Stuart J. Schnitt, Andrew H. Beck
Software Mentions: 2
Published: over 11 years ago

10.3389/fped.2021.670382

Stress and Metabolomics for Prediction of Spontaneous Preterm Birth: A Prospective Nested Case-Control Study in a Tertiary Hospital
Cited by: 3
Author(s): Dongni Huang, Zheng Liu, Xiyao Liu, Yuxiang Bai, Mengshi Wu, Xin Luo, Hongbo Qi
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0238731

The interdependency structure in the Mexican stock exchange: A network approach
Cited by: 2
Author(s): Erick Treviño Aguilar
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0189508

Brain-to-brain hyperclassification reveals action-specific motor mapping of observed actions in humans
Cited by: 11
Author(s): Д. А. Смирнов, Fanny Lachat, Tomi Peltola, Juha M. Lahnakoski, Olli-Pekka Koistinen, Enrico Glerean, Aki Vehtari, Riitta Hari, Mikko Sams, Lauri Nummenmaa
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0141869

Recursive Random Lasso (RRLasso) for Identifying Anti-Cancer Drug Targets
Cited by: 14
Author(s): Hee-Won Park, Seiya Imoto, Satoru Miyano
Software Mentions: 2
Published: almost 11 years ago

10.3389/fphys.2020.00065

Identification of Serum-Based Metabolic Feature and Characteristic Metabolites in Paraquat Intoxicated Mouse Models
Cited by: 9
Author(s): Youjia Yu, Zishan Gao, Jiaqian Lou, Zhengsheng Mao, Kai Li, Chunyan Chu, Li Hu, Zheng Li, Chuwei Deng, Han-Ting Fan, Peng Chen, Huijie Huang, Yizhen Yu, Jingjing Ding, Ding Li
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0189181

DNA methylation levels in candidate genes associated with chronological age in mammals are not conserved in a long-lived seabird
Cited by: 6
Author(s): Ricardo De Paoli-Iseppi, Andrea M. Polanowski, Clive R. McMahon, Bruce E. Deagle, Joanne L. Dickinson, Mark A. Hindell, Simon Jarman
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0106664

Detecting Gunshots Using Wearable Accelerometers
Cited by: 12
Author(s): Charles Loeffler
Software Mentions: 2
Published: almost 12 years ago

10.3389/fpls.2019.01482

Genotype Specific Photosynthesis x Environment Interactions Captured by Automated Fluorescence Canopy Scans Over Two Fluctuating Growing Seasons
Cited by: 19
Author(s): Beat Keller, Shizue Matsubara, Uwe Rascher, Roland Pieruschka, Angelina Steier, Thorsten Kraska, Onno Muller
Software Mentions: 2
Published: over 6 years ago

10.3389/fpsyt.2018.00084

Comorbid Diagnosis of Psychotic Disorders in Borderline Personality Disorder: Prevalence and Influence on Outcome
Cited by: 23
Author(s): Christina W. Slotema, Jan Dirk Blom, Marieke B. A. Niemantsverdriet, Mathijs Deen, Iris Sommer
Software Mentions: 2
Published: over 8 years ago

Projects: cran: glmnet

Science Score: 100/100

Bonuses:

Papers Mentioning glmnet 1,607