Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: glmnet

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/glmnet

Lasso and Elastic-Net Regularized Generalized Linear Models
51 versions
Latest release: over 1 year ago
531 dependent packages
128,740 downloads last month

Papers Mentioning glmnet 1,607

10.12688/f1000research.16216.2
Feature selection with the R package MXM
Cited by: 9
Author(s): Michail Tsagris, Ioannis Tsamardinos
Software Mentions: 3
Published: about 5 years ago
10.3389/fdata.2020.00018
Theory In, Theory Out: The Uses of Social Theory in Machine Learning for Social Science
Cited by: 27
Author(s): Jason Radford, Kenneth Joseph
Software Mentions: 3
Published: over 4 years ago
10.3389/fdata.2021.572532
Evaluating the Effectiveness of Personalized Medicine With Software
Cited by: 6
Author(s): Adam Kapelner, Justin Bleich, Alina Levine, Zachary D. Cohen, Robert J. DeRubeis, Richard A. Berk
Software Mentions: 3
Published: over 3 years ago
10.3389/fcell.2021.651406
A Novel Immune-Related Prognostic Model for Response to Immunotherapy and Survival in Patients With Lung Adenocarcinoma
Cited by: 28
Author(s): Zheng Yang, He Tian, Zheng Zhou, Xiao Chu, Hengchang Liu, Yu Liu, Li-Yu Wang, Tao Fan, Bo Zheng, Fengwei Tan, Qi Xue, Gengshu Gao, Chunxiang Li, Jie He
Software Mentions: 3
Published: over 3 years ago
10.3389/fcell.2021.703969
A Risk Score Model Incorporating Three m6A RNA Methylation Regulators and a Related Network of miRNAs-m6A Regulators-m6A Target Genes to Predict the Prognosis of Patients With Ovarian Cancer
Cited by: 12
Author(s): Qian Li, Chen Ren, Yan‐Nan Chen, Yang Li, Feng Zhang, Bao-Jin Wang, Yuanhang Zhu, Feiyan Li, Jun J. Yang, Zhen-An Zhang
Software Mentions: 3
Published: about 3 years ago
10.3389/fchem.2020.00738
Evaluation of Forensic Data Using Logistic Regression-Based Classification Methods and an R Shiny Implementation
Cited by: 3
Author(s): Giulia Biosa, Diana Giurghita, Eugenio Alladio, Marco Vincenti, Tereza Neocleous
Software Mentions: 3
Published: about 4 years ago
10.3389/fgene.2021.613890
Novel Hypoxia-Related Gene Signature for Risk Stratification and Prognosis in Hepatocellular Carcinoma
Cited by: 7
Author(s): Quanxiao Li, Limin Jin, Minghao Jin
Software Mentions: 3
Published: over 3 years ago
10.3389/fgene.2019.01039
Genetic Study of Severe Prolonged Lymphopenia in Multiple Sclerosis Patients Treated With Dimethyl Fumarate
Cited by: 3
Author(s): Dipen Sangurdekar, Chao Sun, Helen McLaughlin, Katherine Ayling-Rouse, Norm Allaire, M. A. Penny, Paola G. Bronson
Software Mentions: 3
Published: about 5 years ago
10.3389/fgene.2020.585259
Construction and Validation of a Novel Glycometabolism-Related Gene Signature Predicting Survival in Patients With Ovarian Cancer
Cited by: 8
Author(s): Lixiao Liu, Luya Cai, Chuan Liu, Shanshan Yu, Bingxin Li, Linmin Pan, Jinduo Zhao, Ye Zhao, Wenfeng Li, Xiaojian Yan
Software Mentions: 3
Published: about 4 years ago
10.3389/fgene.2020.00456
Comprehensive Analysis of Prognostic Alternative Splicing Signatures in Endometrial Cancer
Cited by: 8
Author(s): Peigen Chen, Junxian He, Huixia Ye, Senwei Jiang, Yunhui Li, Xiaomao Li, Jing Wan
Software Mentions: 3
Published: over 4 years ago
10.3389/fonc.2021.677814
Development of CT-Based Imaging Signature for Preoperative Prediction of Invasive Behavior in Pancreatic Solid Pseudopapillary Neoplasm
Cited by: 7
Author(s): Wei Huang, Si-Yun Liu, Yijing Han, Liming Li, Pan Liang, Jianbo Gao
Software Mentions: 3
Published: over 3 years ago
10.3389/fonc.2020.571380
Multiple Immune Features-Based Signature for Predicting Recurrence and Survival of Inoperable LA-NSCLC Patients
Cited by: 2
Author(s): Meiying Guo, Wanlong Li, Butuo Li, Bing Zou, Shijiang Wang, Bin Fan, Xuejun Sun, Linlin Wang
Software Mentions: 3
Published: about 4 years ago
10.3389/fonc.2020.00457
A Novel Multimodal Radiomics Model for Preoperative Prediction of Lymphovascular Invasion in Rectal Cancer
Cited by: 38
Author(s): Yiying Zhang, Kan He, Yan Guo, Xiangchun Liu, Qi Yang, Chunyu Zhang, Yunming Xie, Shengnan Mu, Yu Guo, Yu Fu, Huimao Zhang
Software Mentions: 3
Published: over 4 years ago
10.3389/fonc.2021.710694
The Prognostic Value of the DNA Repair Gene Signature in Head and Neck Squamous Cell Carcinoma
Cited by: 2
Author(s): Ruijie Ming, Enhao Wang, Jiahui Wei, Jinxiong Shen, Shimin Zong, Hongjun Xiao
Software Mentions: 3
Published: over 3 years ago
10.3389/fonc.2021.638362
Computed Tomography-Based Radiomics Nomogram: Potential to Predict Local Recurrence of Gastric Cancer After Radical Resection
Cited by: 6
Author(s): Liebin Huang, Feng Bao, Yueyue Li, Yu Liu, Yehang Chen, Qinxian Chen, Changlin Li, Wenxi Huang, Haibo Xue, Xuehua Li, Tao Zhou, Ronggang Li, Wansheng Long, Shi‐Ting Feng
Software Mentions: 3
Published: about 3 years ago
10.3389/fonc.2020.569435
Utility of Radiomics for Predicting Patient Survival in Hepatocellular Carcinoma With Portal Vein Tumor Thrombosis Treated With Stereotactic Body Radiotherapy
Cited by: 8
Author(s): Kui Wu, Yongjie Shui, Wenchuan Sun, Sheng Lin, Haowen Pang
Software Mentions: 3
Published: about 4 years ago
10.3389/fonc.2020.570281
A Three-Metabolic-Genes Risk Score Model Predicts Overall Survival in Clear Cell Renal Cell Carcinoma Patients
Cited by: 8
Author(s): Yiqiao Zhao, Zijia Tao, Xiaonan Chen
Software Mentions: 3
Published: about 4 years ago
10.3389/fonc.2021.712746
Exploration of Lipid Metabolism in Gastric Cancer: A Novel Prognostic Genes Expression Profile
Cited by: 9
Author(s): Ze Xiong, Yu Lin, Yan Yu, Xianghui Zhou, Jun Fan, Colin J. Rog, Kailin Cai, Zheng Wang, Zhijie Chen, Guobin Wang, Kaixiong Tao, Ming Cai
Software Mentions: 3
Published: about 3 years ago
10.3389/fonc.2021.614927
A Novel DNA Methylation Signature as an Independent Prognostic Factor in Muscle-Invasive Bladder Cancer
Cited by: 5
Author(s): Zhijie Xu, Hemant Gujar, Guanghou Fu, Hamed Ahmadi, Sumeet Bhanvadia, Daniel J. Weisenberger, Baiye Jin, Parkash S. Gill, Inderbir S. Gill, Siamak Daneshmand, Kimberly D. Siegmund, Gangning Liang
Software Mentions: 3
Published: almost 4 years ago
10.3389/fonc.2021.600546
Radiomic Analysis of Contrast-Enhanced Mammography With Different Image Types: Classification of Breast Lesions
Cited by: 3
Author(s): Simin Wang, Ning Mao, Shaofeng Duan, Qin Li, Ruimin Li, Tingting Jiang, Zhongyi Wang, Haizhu Xie, Yajia Gu
Software Mentions: 3
Published: over 3 years ago
10.3389/fonc.2019.00996
Identification of a Nine-Gene Signature and Establishment of a Prognostic Nomogram Predicting Overall Survival of Pancreatic Cancer
Cited by: 131
Author(s): Mei Wu, Xiaobin Li, Taiping Zhang, Ziwen Liu, Yupei Zhao
Software Mentions: 3
Published: about 5 years ago
10.3389/fonc.2019.01160
A Long Non-coding RNA Signature to Improve Prognostic Prediction of Pancreatic Ductal Adenocarcinoma
Cited by: 16
Author(s): Chixing Zhou, Shun Wang, Qiang Zhou, Jin Zhao, Xianghou Xia, Wanyong Chen, Yan Zheng, Min Xue, Feng Yang, Deliang Fu, Yuehui Yin, Manar Atyah, Lun–Xiu Qin, Yue Zhao, Christiane Bruns, Hongyan Jia, Ning Ren, Qiongzhu Dong
Software Mentions: 3
Published: about 5 years ago
10.3389/fonc.2020.558428
Preoperatively Estimating the Malignant Potential of Mediastinal Lymph Nodes: A Pilot Study Toward Establishing a Robust Radiomics Model Based on Contrast-Enhanced CT Imaging
Cited by: 2
Author(s): Mengshi Dong, Gang Hou, Li Shu, Nan Li, Lina Zhang, Ke Xu
Software Mentions: 3
Published: almost 4 years ago
10.3389/fphar.2020.602030
A Novel Text-Mining Approach for Retrieving Pharmacogenomics Associations From the Literature
Cited by: 3
Author(s): Maria‐Theodora Pandi, Peter J. van der Spek, Maria Koromina, George P. Patrinos
Software Mentions: 3
Published: about 4 years ago
10.3389/fphys.2015.00389
Different Predictors of Right and Left Ventricular Metabolism in Healthy Middle-Aged Men
Cited by: 9
Author(s): Marja A. Heiskanen, Tuija Leskinen, Jari-Joonas Eskelinen, Ilkka Heinonen, Eliisa Löyttyniemi, Kirsi A. Virtanen, Jussi P. Pärkkä, Jarna C. Hannukainen, Kari K. Kalliokoski
Software Mentions: 3
Published: almost 9 years ago
10.3389/fpls.2021.729645
Improving Quantitative Traits in Self-Pollinated Crops Using Simulation-Based Selection With Minimal Crossing
Cited by: 1
Author(s): Daisuke Sekine, Masayuki Tsuda, Shiori Yabe, Takehiko Shimizu, Kayo Machita, Masayasu Saruta, Tetsuya Yamada, Masao Ishimoto, Hiroyoshi Iwata, Akito Kaga
Software Mentions: 3
Published: about 3 years ago
10.3389/fpls.2020.01071
Can Metabolite- and Transcript-Based Selection for Drought Tolerance in Solanum tuberosum Replace Selection on Yield in Arid Environments?
Cited by: 7
Author(s): Manuela Haas, Heike Sprenger, Ellen Zuther, R J Peters, Sylvia Seddig, Dirk Walther, Joachim Kopka, Dirk K. Hincha, Karin Köhl
Software Mentions: 3
Published: over 4 years ago
10.3389/fpsyt.2016.00034
Utility of Machine-Learning Approaches to Identify Behavioral Markers for Substance Use Disorders: Impulsivity Dimensions as Predictors of Current Cocaine Dependence
Cited by: 53
Author(s): Woo-Young Ahn, Divya Ramesh, F. Gerard Moeller, Jasmin Vassileva
Software Mentions: 3
Published: over 8 years ago
10.3389/fpsyt.2019.00953
A Biomarker for Alzheimer’s Disease Based on Patterns of Regional Brain Atrophy
Cited by: 24
Author(s): Stefan Frenzel, Katharina Wittfeld, Mohamad Habes, Johanna Klinger-König, Robin Bülow, Henry Völzke, Hans J. Grabe
Software Mentions: 3
Published: almost 5 years ago
10.3389/fpsyg.2017.01726
Deep Convolutional Neural Networks Outperform Feature-Based But Not Categorical Models in Explaining Object Similarity Judgments
Cited by: 99
Author(s): Kamila M. Jozwik, Nikolaus Kriegeskorte, Katherine R. Storrs, Marieke Mur
Software Mentions: 3
Published: about 7 years ago
10.3390/genes9020078
DNA Methylation and All-Cause Mortality in Middle-Aged and Elderly Danish Twins
Cited by: 26
Author(s): Anne Marie Svane, Mette Soerensen, Jesper Lund, Qihua Tan, Juulia Jylhävä, Yunzhang Wang, Nancy L. Pedersen, Sara Hägg, Birgit Debrabant, Ian J. Deary, Kaare Christensen, Lene Christiansen, Jacob Hjelmborg
Software Mentions: 3
Published: almost 7 years ago
10.3390/genes11101181
In Silico Model for Chemical-Induced Chromosomal Damages Elucidates Mode of Action and Irrelevant Positives
Cited by: 4
Author(s): Yuzo Fujita, Osamu Morita, Hiroshi Honda
Software Mentions: 3
Published: about 4 years ago
10.3390/genes12010125
Identification of Potential Risk Genes and the Immune Landscape of Idiopathic Pulmonary Arterial Hypertension via Microarray Gene Expression Dataset Reanalysis
Cited by: 8
Author(s): Jing Xu, Yicheng Yang, Yuejin Yang, Changming Xiong
Software Mentions: 3
Published: almost 4 years ago
10.1002/gepi.22345
A framework for pathway knowledge driven prioritization in genome‐wide association studies
Cited by: 2
Author(s): Shrayashi Biswas, Suresh Pal, Partha P. Majumder, Samsiddhi Bhattacharjee
Software Mentions: 3
Published: over 4 years ago
10.1186/gb-2013-14-10-r115
DNA methylation age of human tissues and cell types
Cited by: 4,174
Author(s): Steve Horvath
Software Mentions: 3
Published: almost 12 years ago
10.1186/s13059-015-0610-8
MUSiCC: a marker genes based framework for metagenomic normalization and accurate profiling of gene abundances in the microbiome
Cited by: 76
Author(s): Ohad Manor, Elhanan Borenstein
Software Mentions: 3
Published: over 9 years ago
10.1186/s13059-016-1050-9
Cancer biomarker discovery is improved by accounting for variability in general levels of drug sensitivity in pre-clinical models
Cited by: 35
Author(s): Paul Geeleher, Nancy J. Cox, R. Stephanie Huang
Software Mentions: 3
Published: about 8 years ago
10.1186/s13059-018-1514-1
Epigenetic prediction of complex traits and death
Cited by: 133
Author(s): Daniel L. McCartney, Robert F. Hillary, Anna J. Stevenson, Stuart J. Ritchie, Richard M Martin, Qian Zhang, Stewart W. Morris, Mairead Lesley Bermingham, Archie Campbell, Alison Murray, Heather C. Whalley, Catharine R. Galé, David J. Porteous, Chris Haley, Allan F. McRae, Naomi R. Wray, Peter M. Visscher, Andrew M. McIntosh, Kathryn Evans, Ian J. Deary, Riccardo E. Marioni
Software Mentions: 3
Published: about 6 years ago
10.1093/gbe/evy146
Genome-Wide Changes in Protein Translation Efficiency Are Associated with Autism
Cited by: 15
Author(s): Igor B. Rogozin, E. Michael Gertz, Pavel V. Baranov, Eugenia Poliakov, Alejandro A. Schäffer
Software Mentions: 3
Published: over 6 years ago
10.1186/gm433
Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction
Cited by: 96
Author(s): Gerald Quon, Syed Haider, Amit G. Deshwar, Ang Cui, Paul C. Boutros, Quaid Morris
Software Mentions: 3
Published: almost 12 years ago
10.1093/gigascience/giaa076
Imputing missing RNA-sequencing data from DNA methylation by using a transfer learning–based neural network
Cited by: 30
Author(s): Xiang Zhou, Hua Chai, Huiying Zhao, Ching Hsing Luo, Yuedong Yang
Software Mentions: 3
Published: over 4 years ago
10.1001/jamanetworkopen.2018.1018
Development and Validation of an Electronic Health Record–Based Machine Learning Model to Estimate Delirium Risk in Newly Hospitalized Patients Without Known Cognitive Impairment
Cited by: 94
Author(s): Andrew Wong, A. E. Young, April S. Liang, Ralph Gonzales, Vanja C. Douglas, Dexter Hadley
Software Mentions: 3
Published: over 6 years ago
10.7150/jca.52439
Novel biomarkers and prediction model for the pathological complete response to neoadjuvant treatment of triple-negative breast cancer
Cited by: 4
Author(s): Yiqun Han, Jiayu Wang, Binghe Xu
Software Mentions: 3
Published: almost 4 years ago
10.7150/jca.51079
Infiltrating Immune Cells in Gastric Cancer: A Novel Predicting Model for Prognosis
Cited by: 6
Author(s): Wenjie Li, Mengting Li, Haizhou Wang, Yanan Peng, Shouquan Dong, Yuanyuan Lu, Fan Wang, Fei Xu, Lan Liu, Qiu Zhao
Software Mentions: 3
Published: almost 4 years ago
10.7150/jca.57231
A clinical prediction model identifies a subgroup with inferior survival within intermediate risk acute myeloid leukemia
Cited by: 8
Author(s): Xiaoxia Hu, Bianhong Wang, Qi Chen, Aijie Huang, Weijia Fu, Lixia Liu, Ying Zhang, Gusheng Tang, Hui Cheng, Xiong Ni, Lei Gao, Jie Chen, Li Chen, Weiping Zhang, Jianmin Yang, Shanbo Cao, Li Yu, Jianmin Wang
Software Mentions: 3
Published: almost 4 years ago
10.1111/jcmm.16323
Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data
Cited by: 8
Author(s): Xi Tian, Wenhao Xu, Aihetaimujiang Anwaier, Hongkai Wang, Fangning Wan, Dalong Cao, Wenjie Luo, Guohai Shi, Yuanyuan Qu, Hai-Liang Zhang, Dingwei Ye
Software Mentions: 3
Published: over 3 years ago
10.3390/jcm10194393
Clinical Predictors of Prolonged Hospital Stay in Patients with Myasthenia Gravis: A Study Using Machine Learning Algorithms
Cited by: 10
Author(s): Che-Cheng Chang, Jiann‐Horng Yeh, Yeng Chen, Mao-Jhen Jhou, Chi-Jie Lu
Software Mentions: 3
Published: about 3 years ago
10.1038/s41598-021-93869-3
Associations between lipids in selected brain regions, plasma miRNA, and behavioral and cognitive measures following 28Si ion irradiation
Cited by: 7
Author(s): Jessica Minnier, Mark R. Emmett, Ruby Perez, Liang Ding, Brooke L. Barnette, Rianna E. Larios, Changjin Hong, Tae Hyun Hwang, Yongjia Yu, Christina M. Fallgren, Michael D. Story, Michael M. Weil, Jacob Raber
Software Mentions: 3
Published: over 3 years ago
10.1007/s12561-016-9185-5
Classification of Large-Scale Remote Sensing Images for Automatic Identification of Health Hazards
Cited by: 5
Author(s): Mark A. Wolters, C. B. Dean
Software Mentions: 3
Published: almost 8 years ago
10.1007/s11222-019-09914-9
High-dimensional regression in practice: an empirical study of finite-sample prediction, variable selection and ranking
Cited by: 21
Author(s): Fan Wang, Sach Mukherjee, Sylvia Richardson, Steven M. Hill
Software Mentions: 3
Published: almost 5 years ago
10.7150/thno.47882
Plasma protein-based signature predicts distant metastasis and induction chemotherapy benefit in Nasopharyngeal Carcinoma
Cited by: 13
Author(s): Ye‐Lin Liang, Junyan Li, Qian Li, Ling‐Long Tang, Lei Chen, Yan‐Ping Mao, Qing‐Mei He, Xiaojing Yang, Yuan Liu, Xiaohong Hong, Yin Zhao, Shiwei He, Ying Guo, Yaqin Wang, Panpan Zhang, Na Liu, Ying‐Qin Li, Jingfei Ma
Software Mentions: 3
Published: almost 5 years ago
10.1038/s41398-021-01606-1
Who benefits most from expectancy effects? A combined neuroimaging and antidepressant trial in depressed older adults
Cited by: 3
Author(s): Sigal Zilcha‐Mano, Meredith L. Wallace, Patrick J. Brown, Joel R. Sneed, Steven P. Roose, Bret R. Rutherford
Software Mentions: 3
Published: about 3 years ago
10.1128/mSphere.00104-20
HIV Is Associated with Modified Humoral Immune Responses in the Setting of HIV/TB Coinfection
Cited by: 13
Author(s): Esther van Woudenbergh, Edward B. Irvine, Leela Davies, Marwou de Kock, Willem A. Hanekom, Cheryl L. Day, Sarah M. Fortune, Galit Alter
Software Mentions: 3
Published: over 4 years ago
10.1186/s40246-018-0179-x
Bayesian variable selection for parametric survival model with applications to cancer omics data
Cited by: 10
Author(s): Weiwei Duan, Ruyang Zhang, Yang Zhao, Sipeng Shen, Yongyue Wei, Feng Chen, David C. Christiani
Software Mentions: 3
Published: about 6 years ago
10.1186/s13046-021-02016-3
Identification and monitoring of mutations in circulating cell-free tumor DNA in hepatocellular carcinoma treated with lenvatinib
Cited by: 22
Author(s): Yoshiko Fujii, Atsushi Ono, C. Nelson Hayes, Hiroshi Aikata, Masami Yamauchi, Shinsuke Uchikawa, Kenichiro Kodama, Yuji Teraoka, Hatsue Fujino, Takashi Nakahara, Eisuke Murakami, Daiki Miki, Wataru Okamoto, Tomokazu Kawaoka, Masataka Tsuge, Michio Imamura, Kazuaki Chayama
Software Mentions: 3
Published: over 3 years ago
10.7150/ijms.46780
The prognostic value and potential mechanism of Matrix Metalloproteinases among Prostate Cancer
Cited by: 13
Author(s): Xinyu Geng, Chunyang Chen, Yuhua Huang, Jianquan Hou
Software Mentions: 3
Published: almost 5 years ago
10.2196/12214
Improved Real-Time Influenza Surveillance: Using Internet Search Data in Eight Latin American Countries
Cited by: 27
Author(s): Leonardo Clemente, Fred Lu, Mauricio Santillana
Software Mentions: 3
Published: over 5 years ago
10.1007/s11695-016-2477-5
Upregulated TNF Expression 1 Year After Bariatric Surgery Reflects a Cachexia-Like State in Subcutaneous Adipose Tissue
Cited by: 12
Author(s): Alexander Jürets, Bianca Itariu, Magdalena Keindl, Gerhard Prager, Felix B. Langer, Viktor Grablowitz, Maximilian Zeyda, Thomas Stulnig
Software Mentions: 3
Published: almost 8 years ago
10.1194/jlr.M057562
Plasma diacylglycerol composition is a biomarker of metabolic syndrome onset in rhesus monkeys
Cited by: 18
Author(s): Michael A. Polewski, Maggie S. Burhans, Minghui Zhao, Ricki J. Colman, Dhanansayan Shanmuganayagam, Mary J. Lindstrom, James M. Ntambi, Rozalyn M. Anderson
Software Mentions: 3
Published: over 9 years ago
10.7554/eLife.48114
Pretectal neurons control hunting behaviour
Cited by: 39
Author(s): Paride Antinucci, Mónica Folgueira, Isaac H. Bianco
Software Mentions: 3
Published: about 5 years ago
10.7554/eLife.60220
Identifying molecular features that are associated with biological function of intrinsically disordered protein regions
Cited by: 37
Author(s): Taraneh Zarin, Bob Strome, Gang Peng, Iva Pritišanac, Julie D. Forman‐Kay, Alan M. Moses
Software Mentions: 3
Published: almost 4 years ago
10.7554/eLife.45056
Global donor and acceptor splicing site kinetics in human cells
Cited by: 47
Author(s): Leonhard Wachutka, Livia Caizzi, Julien Gagneur, Patrick Cramer
Software Mentions: 3
Published: over 5 years ago
10.7554/eLife.58954
Genetic and environmental determinants of variation in the plasma lipidome of older Australian twins
Cited by: 8
Author(s): Matthew Wai Kin Wong, Anbupalam Thalamuthu, Nady Braidy, Karen A. Mather, Yue Liu, Liliana G Ciobanu, Bernhardt T. Baune, Nicola J. Armstrong, John B. Kwok, Peter R. Schofield, Margaret J. Wright, David Ames, Russell Pickford, Teresa Lee, Anne Poljak, Perminder S. Sachdev
Software Mentions: 3
Published: over 4 years ago
10.3390/ijms21072517
A Machine Learning-Based Identification of Genes Affecting the Pharmacokinetics of Tacrolimus Using the DMETTM Plus Platform
Cited by: 10
Author(s): Jeong‐An Gim, Yonghan Kwon, Hyun A. Lee, Kyeong‐Ryoon Lee, Soohyun Kim, Yuni Choi, Yu Kyong Kim, Howard Lee
Software Mentions: 3
Published: over 4 years ago
10.3390/ijms21113814
Urinary MicroRNAs as Potential Markers for Non-Invasive Diagnosis of Bladder Cancer
Cited by: 13
Author(s): Kati Erdmann, Karsten Salomo, Anna Klimová, Ulrike Heberling, Andrea Lohse-Fischer, Romy Fuehrer, Christian Thomas, Ingo Roeder, Michael Froehner, Manfred P. Wirth, Susanne Fuessel
Software Mentions: 3
Published: over 4 years ago
10.2196/22835
Depression, Anxiety, and Lifestyle Among Essential Workers: A Web Survey From Brazil and Spain During the COVID-19 Pandemic
Cited by: 50
Author(s): Raquel Brandini De Boni, Vicent Balanzá‐Martínez, Jurema Corrêa da Mota, Taiane de Azevedo Cardoso, Pedro Ballester, Beatriz Atienza-Carbonell, Francisco I. Bastos, Flávio Kapczinski
Software Mentions: 3
Published: about 4 years ago
10.1155/2020/5310793
Identification of a 5-Gene Metabolic Signature for Predicting Prognosis Based on an Integrated Analysis of Tumor Microenvironment in Lung Adenocarcinoma
Cited by: 14
Author(s): Xiaolin Yu, Xiaomei Zhang, Yanxia Zhang
Software Mentions: 3
Published: over 4 years ago
10.18632/oncotarget.14850
Therapy-induced developmental reprogramming of prostate cancer cells and acquired therapy resistance
Cited by: 49
Author(s): Mannan Nouri, Josselin Caradec, Amy A. Lubik, Na Li, Brett G. Hollier, Mandeep Takhar, Manuel Altimirano-Dimas, Mengqian Chen, Mani Roshan-Moniri, Miriam Butler, Melanie Lehman, Jennifer Bishop, Sarah Truong, Shih Chieh Huang, Dawn R. Cochrane, Michael Cox, Colin C. Collins, Martin Gleave, Nicholas Erho, Mohamed Alshalafa, Elai Davicioni, Colleen C. Nelson, Sheryl Gregory-Evans, R. Jeffrey Karnes, Robert B. Jenkins, Eric A. Klein, Ralph Buttyan
Software Mentions: 3
Published: almost 8 years ago
10.18632/oncotarget.18332
A cerebrospinal fluid microRNA signature as biomarker for glioblastoma
Cited by: 97
Author(s): Johnny Akers, Wei Hua, Hongying Li, Valya Ramakrishnan, Zixiao Yang, Kai Quan, Wei Zhu, Jie Li, Javier Figueroa, Brian R. Hirshman, Brittney Miller, David Piccioni, Florian Ringel, Ricardo J. Komotar, Karen Messer, Douglas Galasko, Fred H. Hochberg, Ying Mao, Bob S. Carter, Clark C. Chen
Software Mentions: 3
Published: over 7 years ago
10.18632/oncotarget.20195
A GLO10 score for the prediction of prognosis in high grade gliomas
Cited by: 0
Author(s): Feng Chen, Peng Peng, Yi Zhou, Zhenyu Yang, Haiquan Zhang, Xiang-Sheng Ao, Daohong Zhou, Chun-Xiang Xiang
Software Mentions: 3
Published: over 7 years ago
10.18632/oncotarget.20519
Development of a preprocedure nomogram for predicting contrast-induced acute kidney injury after coronary angiography or percutaneous coronary intervention
Cited by: 11
Author(s): Bin Guo, Fusheng Ouyang, Shao-Ming Yang, Ziwei Liu, Shao-Jia Lin, Meng Wang, Xiyi Huang, Lizhu Ouyang, Haixiong Chen, Qiugen Hu
Software Mentions: 3
Published: over 7 years ago
10.18632/oncotarget.22861
A novel messenger RNA signature as a prognostic biomarker for predicting relapse in pancreatic ductal adenocarcinoma
Cited by: 14
Author(s): Guodong Shi, Jingjing Zhang, Zipeng Lu, Dongfang Liu, Yang Wu, Pengfei Wu, Jie Yin, Yuan Hao, Qing Zhu, Lei Chen, Yue Fu, Yunpeng Peng, Yan Wang, Kuirong Jiang, Yi Miao
Software Mentions: 3
Published: almost 7 years ago
10.18632/oncotarget.27301
Pre-surgical connectome features predict IDH status in diffuse gliomas
Cited by: 12
Author(s): Shelli R. Kesler, Rebecca Harrison, Melissa Petersen, Vikram Rao, Hannah Dyson, Kristin Alfaro-Munoz, Shiao Pei Weathers, John de Groot
Software Mentions: 3
Published: about 5 years ago
10.18632/oncotarget.27616
Tumor microRNA profile and prognostic value for lymph node metastasis in oral squamous cell carcinoma patients
Cited by: 10
Author(s): Kelly Yi Ping Liu, Siyi Zhu, Denise Brooks, Reanne Bowlby, J.S. Durham, Yussanne Ma, Richard A. Moore, Andrew J. Mungall, Steven J.M. Jones, Catherine F. Poh
Software Mentions: 3
Published: over 4 years ago
10.3390/jpm11020064
Does Proteomic Mirror Reflect Clinical Characteristics of Obesity?
Cited by: 2
Author(s): Olga I. Kiseleva, Viktoriia A. Arzumanian, Ekaterina V. Poverennaya, Mikhail A. Pyatnitskiy, Ekaterina V. Ilgisonis, Victor G. Zgoda, О А Плотникова, Khaider K. Sharafetdinov, А. В. Лисица, V A Tutelyan, D. B. Nikityuk, Alexander I. Archakov, Elena Ponomarenko
Software Mentions: 3
Published: almost 4 years ago
10.4172/jpb.1000370
Mining the Breast Cancer Proteome for Predictors of Drug Sensitivity
Cited by: 7
Author(s): Leslie C Timpe Dian Li, Ten Yang Yen Judi Wong
Software Mentions: 3
Published: almost 10 years ago
10.1093/jrr/rrz027
CT-based radiomic signatures for prediction of pathologic complete response in esophageal squamous cell carcinoma after neoadjuvant chemoradiotherapy
Cited by: 49
Author(s): Yang Zy, Binghui He, Xinyu Zhuang, Xiaoying Gao, Dandan Wang, Mei Li, Zhongqiu Lin, Ren Luo
Software Mentions: 3
Published: over 5 years ago
10.1177/2325967117716381
Development of a Prediction Model for Stress Fracture During an Intensive Physical Training Program: The Royal Marines Commandos
Cited by: 7
Author(s): Maria T Sanchez‐Santos, T. F. Davey, K M Leyland, Adrian Allsopp, Susan A Lanham-New, Andrew Judge, N K Arden, Joanne L. Fallowfield
Software Mentions: 3
Published: over 7 years ago
10.1186/s12967-020-02374-0
Neutrophil-to-lymphocyte ratio predicts critical illness patients with 2019 coronavirus disease in the early stage
Cited by: 592
Author(s): Jingyuan Liu, Yao Liu, Xiang Pan, Lin Pu, Haofeng Xiong, Chuansheng Li, Ming Zhang, Jianbo Tan, Yanli Xu, Rui Song, Meihua Song, Lin Wang, Wei Zhang, Bing Han, Li Yang, Xiaojing Wang, Guiqin Zhou, Ting Zhang, Ben Li, Yanbin Wang, Zhihai Chen, Xianbo Wang
Software Mentions: 3
Published: over 4 years ago
10.1186/s12967-019-1946-8
Development and validation of a new tumor-based gene signature predicting prognosis of HBV/HCV-included resected hepatocellular carcinoma patients
Cited by: 15
Author(s): Gui‐Qi Zhu, Yi Yang, Er‐Bao Chen, Biao Wang, Kun Xiao, Shi-Ming Shi, Zheng‐Jun Zhou, Shao-Lai Zhou, Zheng Wang, Ying‐Hong Shi, Jia Fan, Jian Zhou, Tianshu Liu
Software Mentions: 3
Published: over 5 years ago
10.1186/s12967-020-02366-0
Development and validation of a hypoxia-immune-based microenvironment gene signature for risk stratification in gastric cancer
Cited by: 59
Author(s): Yifan Liu, Jianhua Wu, Weiwei Huang, Shao‐Wen Weng, Baochun Wang, Yiming Chen, Hao Wang
Software Mentions: 3
Published: over 4 years ago
10.1186/s12967-020-02255-6
Development and validation of a novel immune-related prognostic model in hepatocellular carcinoma
Cited by: 60
Author(s): Zheng Wang, Jie Zhu, Yongjuan Liu, Changhong Liu, Wenqi Wang, Fengzhe Chen, Lixian Ma
Software Mentions: 3
Published: almost 5 years ago
10.1155/2021/5596924
Gut Microbiota-Related Effects of Tanhuo Decoction in Acute Ischemic Stroke
Cited by: 22
Author(s): Qian Guo, Xiaoqing Jiang, Can Ni, Linjing Li, Li Chen, Yaqi Wang, Mo Li, Chunhui Wang, Li Gao, Huaiqiu Zhu, Juexian Song
Software Mentions: 3
Published: over 3 years ago
10.1186/s12986-020-00519-y
Proposal of a new equation for estimating resting energy expenditure of acute kidney injury patients on dialysis: a machine learning approach
Cited by: 4
Author(s): Daniela Ponce, Cassiana Regina de Góes, Luís Gustavo Modelli de Andrade
Software Mentions: 3
Published: about 4 years ago
10.3390/nu11030576
Fatty Acids Composition of Blood Cell Membranes and Peripheral Inflammation in the PREDIMED Study: A Cross-Sectional Analysis
Cited by: 13
Author(s): Jananee Muralidharan, Christopher Papandreou, Aleix Sala‐Vila, Núria Rosique-Esteban, Montserrat Fitó, Ramón Estruch, Miguel Ángel Martínez‐González, Dolores Corella, Emilio Ros, Cristina Razquín, Olga Castañer, Jordi Salas‐Salvadó, Mònica Bulló
Software Mentions: 3
Published: over 5 years ago
10.3390/e22050543
Prediction and Variable Selection in High-Dimensional Misspecified Binary Classification
Cited by: 5
Author(s): Konrad Furmańczyk, Wojciech Rejchel
Software Mentions: 2
Published: over 4 years ago
10.1186/s40352-015-0022-6
Health-related factors predict return to custody in a large cohort of ex-prisoners: new approaches to predicting re-incarceration
Cited by: 22
Author(s): Emma F. Thomas, Matthew J Spittal, Faye S. Taxman, Stuart A Kinner
Software Mentions: 2
Published: over 9 years ago
10.3390/healthcare9070887
Accreditation and Certification: Do They Improve Hospital Financial and Quality Performance?
Cited by: 2
Author(s): Matthew Brooks, Brad Beauvais, Clemens Scott Kruse, Lawrence V. Fulton, Michael Mileski, Zo Ramamonjiarivelo, Ramalingam Shanmugam, Cristian Lieneck
Software Mentions: 2
Published: over 3 years ago
10.1186/s12982-016-0047-x
Dimension reduction and shrinkage methods for high dimensional disease risk scores in historical data
Cited by: 17
Author(s): Hiraku Kumamaru, Sebastian Schneeweiß, Robert J. Glynn, Soko Setoguchi, Joshua J. Gagne
Software Mentions: 2
Published: over 8 years ago
10.1002/ece3.2892
Are whooping cranes destined for extinction? Climate change imperils recruitment and population growth
Cited by: 8
Author(s): Matthew J. Butler, Kristine L. Metzger, Grant Harris
Software Mentions: 2
Published: over 7 years ago
10.1002/ece3.5072
The habitat functional response links seasonal third‐order selection to second‐order landscape characteristics
Cited by: 9
Author(s): Kelsey E. Paolini, Bronson K. Strickland, Jessica L. Tegt, Kurt C. VerCauteren, Garrett M. Street
Software Mentions: 2
Published: over 5 years ago
10.1002/iid3.133
Whole genome prediction and heritability of childhood asthma phenotypes
Cited by: 2
Author(s): Michael J. McGeachie, George L. Clemmer, Damien C. Croteau‐Chonka, Peter J. Castaldi, Michael H. Cho, Joanne E. Sordillo, Jessica Lasky‐Su, Benjamin A. Raby, Kelan G. Tantisira, Scott T. Weiss
Software Mentions: 2
Published: almost 8 years ago
10.1002/iid3.363
A signature of 18 immune‐related gene pairs to predict the prognosis of pancreatic cancer patients
Cited by: 5
Author(s): Fanqin Bu, Han Nie, Xiaojian Zhu, Ting Wu, Lin Kang, Jiefeng Zhao, Jun Huang
Software Mentions: 2
Published: about 4 years ago
10.1002/iid3.421
Construction and validation of a machine learning‐based nomogram: A tool to predict the risk of getting severe coronavirus disease 2019 (COVID‐19)
Cited by: 11
Author(s): Zhixian Yao, Xinyi Zheng, Zheng Zhong, Ke Wu, Junhua Zheng
Software Mentions: 2
Published: over 3 years ago
10.1111/irv.12622
Serological response to influenza vaccination among adults hospitalized with community-acquired pneumonia
Cited by: 2
Author(s): Caroline Quinn Pratt, Yuwei Zhu, Carlos G. Grijalva, Richard G. Wunderink, D. Mark Courtney, Grant Waterer, Min Z. Levine, Stacie Jefferson, Wesley H. Self, Derek J. Williams, L. Finelli, Anna M. Bramley, Kathryn M. Edwards, Seema Jain, Evan J. Anderson
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12885-020-07688-2
A genomic-clinicopathologic nomogram for predicting overall survival of hepatocellular carcinoma
Cited by: 4
Author(s): Kena Zhou, Qiang Zhou, Congbo Cai
Software Mentions: 2
Published: almost 4 years ago
10.1242/dmm.028175
Heterozygous <i>Vangl2</i> <i>Looptail</i> mice reveal novel roles for the planar cell polarity pathway in adult lung homeostasis and repair
Cited by: 24
Author(s): Thanushiyan Poobalasingam, Laura L. Yates, Simone A. Walker, Miguel Pereira, Nina Groß, Akmol Ali, Maria Kolatsi-Joannou, Marjo Riitta Järvelin, Juha Pekkanen, Eugenia Papakrivopoulou, David A. Long, Mark Griffiths, Darcy E. Wagner, Mélanie Königshoff, Matthew Hind, Cosetta Minelli, Clare M. Lloyd, Charlotte Dean
Software Mentions: 2
Published: almost 8 years ago
10.3390/diagnostics11050880
Automated Assessment of Thoracic-Abdominal Asynchrony in Patients with Morquio Syndrome
Cited by: 1
Author(s): Madhavi Vedula Ratnagiri, Yan Zhu, Tariq Rahman, Mary C. Theroux, Shunji Tomatsu, Thomas H. Shaffer
Software Mentions: 2
Published: over 3 years ago
10.1007/s00125-021-05474-8
Greater daily glucose variability and lower time in range assessed with continuous glucose monitoring are associated with greater aortic stiffness: The Maastricht Study
Cited by: 16
Author(s): Yuri D. Foreman, William P T M van Doorn, Nicolaas C. Schaper, Marleen M.J. van Greevenbroek, Carla Kallen, Ronald M.A. Henry, Annemarie Koster, Simone J. P. M. Eussen, Anke Wesselius, Koen D. Reesink, Miranda T. Schram, Pieter C. Dagnelie, Abraham A. Kroon, Martijn C.G.J. Brouwers, Coen D. A. Stehouwer
Software Mentions: 2
Published: over 3 years ago
10.1001/jamanetworkopen.2020.11768
Development of a Machine Learning Model for Survival Risk Stratification of Patients With Advanced Oral Cancer
Cited by: 38
Author(s): Yi-Ju Tseng, Hsin-Yao Wang, Ting Wei Lin, Jang Jih Lu, Chia Hsun Hsieh, Chun Ta Liao
Software Mentions: 2
Published: over 4 years ago