cran: ggrepel | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0215838

Mutplot: An easy-to-use online tool for plotting complex mutation data with flexibility
Cited by: 11
Author(s): Weiwei Zhang, Cheng Wang, Xuan Zhang
Software Mentions: 6
Published: over 5 years ago

Adiposity QTL Adip20 decomposes into at least four loci when dissected using congenic strains
Cited by: 4
Author(s): Cailu Lin, Brad D. Fesi, Michael Marquis, Natalia P. Bosak, Anna Lysenko, Mohammed Amin Koshnevisan, Fujiko Duke, Maria L. Theodorides, Theodore M. Nelson, Amanda H. McDaniel, Mauricio Avigdor, Charles J. Arayata, Lauren Shaw, Alexander A. Bachmanov, Danielle R. Reed
Software Mentions: 6
Published: about 7 years ago

10.1186/s13148-020-00881-x

Gene–methylation interactions: discovering region-wise DNA methylation levels that modify SNP-associated disease risk
Cited by: 7
Author(s): Julia Romanowska, Øystein Ariansen Haaland, Astanand Jugessur, Miriam Gjerdevik, Zongli Xu, Jack A. Taylor, Allen J. Wilcox, Inge Jonassen, Rolv Terje Lie, Håkon K. Gjessing
Software Mentions: 6
Published: over 4 years ago

10.1186/s12876-021-01734-4

Identification of the angiogenesis related genes for predicting prognosis of patients with gastric cancer
Cited by: 9
Author(s): Shu Zheng, Zizhen Zhang, Ning Ding, Jiawei Sun, Yaowang Lin, Jingyu Chen, Jing Zhong, Liming Shao, Zhenghua Lin, Min Xue
Software Mentions: 6
Published: over 3 years ago

10.3390/plants10061123

Genome-Wide Association Analysis for Stem Cross Section Properties, Height and Heading Date in a Collection of Spanish Durum Wheat Landraces
Cited by: 9
Author(s): Carmen M. Ávila, María Dolores Requena-Ramírez, Cristina Rodríguez-Suárez, Fernando Flores, Josefina C. Sillero, Sergio G. Atienza
Software Mentions: 6
Published: over 3 years ago

10.1186/s12863-021-00991-2

The transcription factor reservoir and chromatin landscape in activated plasmacytoid dendritic cells
Cited by: 4
Author(s): Ritu Mann-Nüttel, Shafaqat Ali, Patrick Petzsch, Karl Köhrer, Judith Alferink, Stefanie Scheu
Software Mentions: 6
Published: about 3 years ago

10.1002/pld3.41

High‐fidelity detection of crop biomass quantitative trait loci from low‐cost imaging in the field
Cited by: 11
Author(s): Darshi Banan, Rachel Paul, Max Feldman, Mark W. Holmes, Hannah Schlake, Ivan Baxter, Hui Jiang, Andrew D. B. Leakey
Software Mentions: 6
Published: almost 7 years ago

10.1155/2021/9921466

A Novel Immune-Related lncRNA-Based Model for Survival Prediction in Clear Cell Renal Cell Carcinoma
Cited by: 9
Author(s): Zedan Zhang, Yanlin Tang, Yanjun Liu, Hongkai Zhuang, Enyu Lin, Lu Xie, Xiaoqiang Feng, Kaiwen Tian, Jiayi Zeng, Jiumin Liu, Yuming Yu
Software Mentions: 6
Published: over 3 years ago

10.1186/s12864-017-4386-y

Global accumulation of circRNAs during aging in Caenorhabditis elegans
Cited by: 127
Author(s): Mariela Cortés-López, Matthew Gruner, Daphne A. Cooper, Hannah N. Gruner, Alexandru-Ioan Voda, Alexander M. van der Linden, Pedro Miura
Software Mentions: 6
Published: almost 7 years ago

10.1038/s41598-019-45844-2

Intracellular Zn2+ transients modulate global gene expression in dissociated rat hippocampal neurons
Cited by: 35
Author(s): Lynn Sanford, Margaret C. Carpenter, Amy E. Palmer
Software Mentions: 6
Published: over 5 years ago

10.3390/biology10060502

Characterization of Tumor-Associated Macrophages and the Immune Microenvironment in Limited-Stage Neuroendocrine-High and -Low Small Cell Lung Cancer
Cited by: 22
Author(s): Dávid Dóra, Christopher J. Rivard, Hui Yu, Shivaun Lueke Pickard, Viktória László, Tünde Harkó, Zsolt Megyesfalvi, Elek Dinya, Csongor Gerdán, Gábor Szegvári, Fred R. Hirsch, Balázs Döme, Zoltán Lohinai
Software Mentions: 6
Published: over 3 years ago

10.1177/0146167220946187

The Association Between Threat and Politics Depends on the Type of Threat, the Political Domain, and the Country
Cited by: 24
Author(s): Mark J. Brandt, Felicity Mary Turner-Zwinkels, Beste Karapirinler, Florian van Leeuwen, Michael Bender, Yvette van Osch, Byron G. Adams
Software Mentions: 5
Published: over 4 years ago

10.1016/j.jcmgh.2021.06.004

Impaired Luminal Control of Intestinal Macrophage Maturation in Patients With Ulcerative Colitis During Remission
Cited by: 7
Author(s): Lujain Maasfeh, Anetta Härtlová, Stefan Isaksson, Johanna Sundin, Georgios Mavroudis, Otto Savolainen, Hans Strid, Lena Öhman, Maria K. Magnusson
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-017-17408-9

Model-based genome-wide determination of RNA chain elongation rates in Escherichia coli
Cited by: 7
Author(s): Peter Großmann, Anja Lück, Christoph Kaleta
Software Mentions: 5
Published: almost 7 years ago

10.1155/2020/7082408

Identification and Validation of an Individualized EMT-Related Prognostic Risk Score Formula in Gastric Adenocarcinoma Patients
Cited by: 13
Author(s): Deyu Zhang, Siran Zhou, Bing-Rong Liu
Software Mentions: 5
Published: over 4 years ago

10.7717/peerj.8327

Obesity in the Balinese is associated with FTO rs9939609 and rs1421085 single nucleotide polymorphisms
Cited by: 5
Author(s): Lidwina Priliani, Sukma Oktavianthi, Ria Hasnita, Hazrina T. Nussa, Rut Christine Inggriani, Clarissa A. Febinia, Anom Bowolaksono, Rini Puspitaningrum, Rully Adi Nugroho, Ketut Suastika, Safarina G. Malik
Software Mentions: 5
Published: almost 5 years ago

10.1038/s41392-020-00221-8

An individualized immune signature of pretreatment biopsies predicts pathological complete response to neoadjuvant chemoradiotherapy and outcomes in patients with esophageal squamous cell carcinoma
Cited by: 17
Author(s): Chaoqi Zhang, Guochao Zhang, Nan Sun, Zhen Zhang, Liyan Xue, Zhihui Zhang, Haijun Yang, Yuejun Luo, Xiaoli Zheng, Yonglei Zhang, Yufen Yuan, Ruixue Lei, Zhaoyang Yang, Bo Zheng, Le Wang, Yun Cao, Feng Wang, Sihui Wang, Shugeng Gao, Qi Xue, Yi Zhang, Jie He
Software Mentions: 5
Published: about 4 years ago

10.1186/s13059-021-02336-9

Complete vertebrate mitogenomes reveal widespread repeats and gene duplications
Cited by: 56
Author(s): Giulio Formenti, Arang Rhie, Jennifer Balacco, Bettina Haase, Jacquelyn Mountcastle, Olivier Fédrigo, Shan-Estelle Brown, Marco Rosario Capodiferro, Farooq Omar Maan Al-Ajli, Roberto Ambrosini, Peter Houde, Sergey Koren, Karen Oliver, Michelle Smith, Jason Skelton, Emma Betteridge, Jale Dolucan, Craig Corton, Iliana Bista, James Torrance, Alan S. Tracey, Jonathan Wood, Marcela Uliano-Silva, Kerstin Howe, Shane McCarthy, Sylke Winkler, Woori Kwak, Jonas Korlach, Arkarachai Fungtammasan, Daniel Fordham, Vânia Costa, Simon Mayes, Matteo Chiara, David S. Horner, Eugene W. Myers, Richard Durbin, Alessandro Achilli, Edward L. Braun, Adam M. Phillippy, Erich D. Jarvis
Software Mentions: 5
Published: over 3 years ago

10.3390/nu12092800

Whole Blueberry and Isolated Polyphenol-Rich Fractions Modulate Specific Gut Microbes in an In Vitro Colon Model and in a Pilot Study in Human Consumers
Cited by: 25
Author(s): Alexandra Ntemiri, Tarini Shankar Ghosh, Molly E. Gheller, Tam Tran, Jamie Blum, Paola Pellanda, Klára Vlčková, Marta C Neto, Amy B. Howell, Anna Thalacker‐Mercer, Paul W. O’Toole
Software Mentions: 5
Published: about 4 years ago

10.3390/v13081540

Multi-Tissue Transcriptomic-Informed In Silico Investigation of Drugs for the Treatment of Dengue Fever Disease
Cited by: 1
Author(s): Beatríz Sierra, Ana C. Magalhães, Daniel Lemos Soares, Bruno Cavadas, Ana B. Pérez, Mayling Álvarez, Eglys Aguirre, Claudia Bracho, Luı́sa Pereira, María G. Guzmán
Software Mentions: 5
Published: over 3 years ago

10.3390/cancers12102959

De Novo A-to-I RNA Editing Discovery in lncRNA
Cited by: 15
Author(s): Domenico Alessandro Silvestris, Chiara Scopa, Sara Hanchi, Franco Locatelli, Angela Gallo
Software Mentions: 5
Published: about 4 years ago

10.3389/fimmu.2021.669920

Myeloid ATP Citrate Lyase Regulates Macrophage Inflammatory Responses In Vitro Without Altering Inflammatory Disease Outcomes
Cited by: 6
Author(s): Sanne G.S. Verberk, Hendrik J. P. van der Zande, Jeroen Baardman, Kyra E. de Goede, Karl J. Harber, Eelco D. Keuning, Joost M. Lambooij, Frank Otto, Anna Zawistowska-Deniziak, Helga E. de Vries, Menno P.J. de Winther, Bruno Guigas, Jan Van den Bossche
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0221596

Sepsis information-seeking behaviors via Wikipedia between 2015 and 2018: A mixed methods retrospective observational study
Cited by: 7
Author(s): Craig S. Jabaley, Robert F. Groff, Theresa J. Barnes, Mark Caridi-Scheible, James M. Blum, Vikas N O’Reilly-Shah
Software Mentions: 5
Published: over 5 years ago

10.3389/fgene.2021.706814

A Nomogram Integrating Ferroptosis- and Immune-Related Biomarkers for Prediction of Overall Survival in Lung Adenocarcinoma
Cited by: 2
Author(s): Mengyu Chai, Xiuchun Li, Yaxin Zhang, Yemeng Tang, Pingping Shu, Lin Jia, Ke–Qing Shi, Liangxing Wang, Xiaoying Huang
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-019-49010-6

Exercise training counteracts urothelial carcinoma-induced alterations in skeletal muscle mitochondria phospholipidome in an animal model
Cited by: 8
Author(s): Javier‐Fernando Montero‐Bullon, Tânia Melo, Rita Ferreira, Ana Isabel Padrão, Paula A. Oliveira, M. Rosário M. Domingues, Pedro Domingues
Software Mentions: 5
Published: about 5 years ago

10.3390/metabo10050212

An NMR-Based Approach to Identify Urinary Metabolites Associated with Acute Physical Exercise and Cardiorespiratory Fitness in Healthy Humans—Results of the KarMeN Study
Cited by: 10
Author(s): Sina Kistner, M Rist, Maik Döring, Claudia Dörr, Rainer Neumann, Sascha Härtel, Achim Bub
Software Mentions: 5
Published: over 4 years ago

10.3390/microorganisms9091897

High Diversity of Leptospira Species Infecting Bats Captured in the Urabá Region (Antioquia-Colombia)
Cited by: 7
Author(s): Fernando P. Monroy, Sergio Solari, Juan A. López, Piedad Agudelo‐Flórez, Ronald Guillermo Peláez Sánchez
Software Mentions: 5
Published: about 3 years ago

10.1371/journal.ppat.1009441

Viral infection of human neurons triggers strain-specific differences in host neuronal and viral transcriptomes
Cited by: 8
Author(s): Colleen A. Mangold, Molly M. Rathbun, Daniel W. Renner, Chad V. Kuny, Moriah L. Szpara
Software Mentions: 5
Published: over 3 years ago

10.3389/fgene.2021.707299

Esophageal Cancer Associated Immune Genes as Biomarkers for Predicting Outcome in Upper Gastrointestinal Tumors
Cited by: 9
Author(s): Chuanhui Zhu, Qianqian Xia, Bin Gu, Mengjing Cui, Xing Zhang, Wenjing Yan, Dan Meng, Siyuan Shen, Shuqian Xie, Xueliang Li, Hua Jin, Shizhi Wang
Software Mentions: 5
Published: over 3 years ago

10.1128/mBio.01165-19

A Central Small RNA Regulatory Circuit Controlling Bacterial Denitrification and N <sub>2</sub> O Emissions
Cited by: 12
Author(s): Hannah Gaimster, Claire L. Hews, Ryan D. Griffiths, Manuel J. Soriano-Laguna, Mark Alston, David J. Richardson, Andrew J. Gates, Gary Rowley
Software Mentions: 5
Published: over 5 years ago

10.3390/ijms21175990

Peripheral Cytokine Levels Differ by HPV Status and Change Treatment-Dependently in Patients with Head and Neck Squamous Cell Carcinoma
Cited by: 14
Author(s): D Mytilineos, Jasmin Ezić, Adrian von Witzleben, Joannis Mytilineos, Ramin Lotfi, Daniel E. Fürst, Chrysanthi Tsamadou, Marie‐Nicole Theodoraki, Angelika Oster, Gunnar Völkel, Hans A. Kestler, Cornelia Brunner, Patrick J. Schuler, Johannes Doescher, Thomas Hoffmann, Simon Laban
Software Mentions: 4
Published: over 4 years ago

10.1016/j.celrep.2017.08.010

Genomic Determinants of Protein Abundance Variation in Colorectal Cancer Cells
Cited by: 92
Author(s): Theodoros I. Roumeliotis, Steven P. Williams, Emanuel Gonçalvès, Clara Alsinet, Martín Del Castillo Velasco-Herrera, Nanne Aben, Fatemeh Zamanzad Ghavidel, Magali Michaut, Michaël Schubert, Stacey Price, James C. Wright, Lu Yu, Meizhu Yang, Rodrigo Dienstmann, Justin Guinney, Pedro Beltrão, Alvis Brāzma, Mercedes Pardo, Oliver Stegle, David J. Adams, Lodewyk Wessels, Julio Sáez-Rodríguez, Ultan McDermott, Jyoti S. Choudhary
Software Mentions: 4
Published: over 7 years ago

10.3390/cancers13123054

Myeloid-Specific Acly Deletion Alters Macrophage Phenotype In Vitro and In Vivo without Affecting Tumor Growth
Cited by: 6
Author(s): Kyra E. de Goede, Sanne G.S. Verberk, Jeroen Baardman, Karl J. Harber, Yvette van Kooyk, Menno P.J. de Winther, Sjoerd Schetters, Jan Van den Bossche
Software Mentions: 4
Published: over 3 years ago

10.3389/fimmu.2021.645770

IFNγ Modulates the Immunopeptidome of Triple Negative Breast Cancer Cells by Enhancing and Diversifying Antigen Processing and Presentation
Cited by: 21
Author(s): Gabriel Gonçalves, Kerry A Mullan, Divya Duscharla, Rochelle Ayala, Nathan P. Croft, Pouya Faridi, Anthony W. Purcell
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2020.554105

Diverse Bacterial Communities From Qaidam Basin of the Qinghai–Tibet Plateau: Insights Into Variations in Bacterial Diversity Across Different Regions
Cited by: 6
Author(s): Wei Zhang, Ali Bahadur, Gaosen Zhang, Binglin Zhang, Xiukun Wu, Tuo Chen, Guangxiu Lu
Software Mentions: 4
Published: about 4 years ago

10.2217/fvl-2020-0256

Epidemiologic features and clinical course of COVID-19: a retrospective analysis of 19 patients in Germany
Cited by: 1
Author(s): Sara Elgamasy, Eman El-Sayed Sakr, Mohamed Gomaa Kamel, Sherief Ghozy, Ghadeer Gamal Elsayed, Mostafa Mahmoud Fahmy, Ahmed Ghazy, Mohamed M. Ibrahim, Mostafa Ebraheem Morra
Software Mentions: 4
Published: almost 4 years ago

10.3390/v11040377

Determining the Replication Kinetics and Cellular Tropism of Influenza D Virus on Primary Well-Differentiated Human Airway Epithelial Cells
Cited by: 32
Author(s): Melle Holwerda, Jenna N. Kelly, Laura Laloli, Isabel Stürmer, Jasmine Portmann, Hanspeter Stalder, Ronald Dijkman
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-019-44230-2

Genetic structure and forensic characteristics of Tibeto-Burman-speaking Ü-Tsang and Kham Tibetan Highlanders revealed by 27 Y-chromosomal STRs
Cited by: 16
Author(s): Guanglin He, Zheng Wang, Yongdong Su, Xing Zou, Mengge Wang, Xu Chen, Bo Gao, Jing Liu, Shouyu Wang, Yiping Hou
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-019-47533-6

Stoichiogenomics reveal oxygen usage bias, key proteins and pathways associated with stomach cancer
Cited by: 6
Author(s): Xiaoyan Zuo, Bo Li, Chengxu Zhu, Yan Zeng, Miao Li, Xinyi Wang, Yujuan Zhang
Software Mentions: 4
Published: over 5 years ago

10.1186/s12935-021-01928-6

Construction of a prognostic model with histone modification-related genes and identification of potential drugs in pancreatic cancer
Cited by: 8
Author(s): Chen Yuan, Ruiyuan Xu, Rexiati Ruze, Jinshou Yang, Huanyu Wang, Jianlu Song, Lei You, Yuming Wang, Yupei Zhao
Software Mentions: 4
Published: over 3 years ago

10.3390/biomedicines9060646

Identification of MicroRNAs as Viable Aggressiveness Biomarkers for Prostate Cancer
Cited by: 11
Author(s): Luis Javier Martínez-González, Victor Sánchez-Conde, Jose María González-Cabezuelo, Alba Antúnez-Rodríguez, Eduardo Andrés-León, Inmaculada Robles-Fernández, José A. Lorente, Fernando Vázquez-Alonso, María Jesús Álvarez-Cubero
Software Mentions: 4
Published: over 3 years ago

10.1128/mBio.00766-20

Codon Usage Optimization in the Prokaryotic Tree of Life: How Synonymous Codons Are Differentially Selected in Sequence Domains with Different Expression Levels and Degrees of Conservation
Cited by: 9
Author(s): José Luis López, Mauricio Javier Lozano, María Laura Fabre, Antonio Lagares
Software Mentions: 4
Published: over 4 years ago

10.3390/ijerph16111919

Effects of Small Gaps on the Relationship Among Soil Properties, Topography, and Plant Species in Subtropical Rhododendron Secondary Forest, Southwest China
Cited by: 7
Author(s): Fenghua Tang, Wenxuan Quan, Chaochan Li, Xianfei Huang, Xianliang Wu, Qiaoan Yang, Yannan Pan, Tayan Xu, Chenyu Qian, Yunbing Gu
Software Mentions: 4
Published: over 5 years ago

10.7554/eLife.66537

Insights from a Pan India Sero-Epidemiological survey (Phenome-India Cohort) for SARS-CoV2
Cited by: 21
Author(s): Salwa Naushin, Viren Sardana, Rajat Ujjainiya, Nitin Bhatheja, Rintu Kutum, Akash Kumar Bhaskar, Shalini Pradhan, Satyartha Prakash, Raju Khan, Birendra Singh Rawat, Karthik Bharadwaj Tallapaka, Mahesh Anumalla, Giriraj R Chandak, Amit Lahiri, Susanta Kumar Kar, Shrikant R. Mulay, Madhav Nilakanth Mugale, Mrigank Srivastava, S. Muhammad Salim Khan, Anjali Srivastava, Bhawana Tomar, Murugan Veerapandian, Ganesh Venkatachalam, Selvamani Raja Vijayakumar, Ajay Agarwal, Dinesh Gupta, Prakash M. Halami, Muthukumar Serva Peddha, Gopinath M Sundaram, Ravindra P. Veeranna, Anirban Pal, Vinay Agarwal, Anil Ku Maurya, Ranvijay Singh, Ashok Kumar Raman, Suresh Kumar Anandasadagopan, Parimala Karuppanan, S. Venkatesan, Harish Kumar Sardana, Anamika Kothari, Rishabh Jain, Anupma Thakur, Devendra Singh Parihar, Anas Saifi, Jasleen Kaur, Virendra Kumar, Avinash Mishra, Iranna Gogeri, Geethavani Rayasam, Praveen Singh, Rahul Chakraborty, Gaura Chaturvedi, Pinreddy Karunakar, Rohit Yadav, Sunanda Singhmar, Deeksha Singh, Sharmistha Sarkar, Paramita Bhattacharya, Sundaram Acharya, Vandana Singh, Shweta Jain Verma, Drishti Soni, Surabhi Seth, Sakshi Vashisht, Sarita Thakran, Firdaus Fatima, Akash Kumar Singh, Akanksha Sharma, Babita Sharma, Manikandan Subramanian, Yogendra Padwad, Vipin Hallan, Vikram Patial, Damanpreet Singh, Narendra Vijay Tripude, Partha Chakrabarti, Sujay Krishna Maity, Dipyaman Ganguly, Jit Sarkar, Ramakrishna Sistla, Balthu Narender Kumar, Kiran A Kumar, Sumit G. Gandhi, Piyush Singh Jamwal, Rekha Chouhan, Vijay Lakshmi Jamwal, Nitika Kapoor, Debashish Ghosh, Ghanshyam Thakkar, Umakanta Subudhi, Pradip Sen, Saumya Ray Chaudhury, Rashmi Kumar, Pawan Gupta, Amit Tuli, Deepak Sharma, Rajesh P. Ringe, D Amarnarayan, Mahesh Kulkarni, Dhansekaran Shanmugam, Mahesh Dharne, Sayed G Dastager, Rakesh S. Joshi, Amita P Patil, Sachin Mahajan, Abujunaid Habib Khan, Vasudev S. Wagh, Rakesh Kumar Yadav, Ajinkya Khilari, Mayuri Bhadange, Arvindkumar H. Chaurasiya, Shabda E Kulsange, Krishna Khairnar, Shilpa Paranjape, Jatin Kalita, Narahari G Sastry, Tridip Phukan, Prasenjit Manna, Wahengbam Romi, Pankaj Bharali, Dibyajyoti Ozah, Ravi Kumar Sahu, E. V. S. S. K. Babu, Rajeev Sukumaran, Aiswarya R Nair, Prajeesh Kooloth Valappil, Anoop Puthiyamadam, Adarsh Velayudhanpillai, Kalpana Chodankar, Samir Damare, Yennapu Madhavi, V. Aggarwal, Sumit Dahiya, Anurag Agrawal, Debasis Dash, Shantanu Sengupta
Software Mentions: 4
Published: over 3 years ago

10.1186/s12859-019-3201-y

Manhattan++: displaying genome-wide association summary statistics with multiple annotation layers
Cited by: 4
Author(s): Christopher Grace, Martin Farrall, Hugh Watkins, Anuj Goel
Software Mentions: 4
Published: about 5 years ago

10.1186/s13223-021-00584-9

Expression profiling of ileal mucosa in asthma reveals upregulation of innate immunity and genes characteristic of Paneth and goblet cells
Cited by: 1
Author(s): Jan Krzysztof Nowak, Marzena Dworacka, Nazgul Gubaj, Arystan Dossimov, Zhumabek Dossimov, Jarosław Walkowiak
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-017-14487-6

New method for the identification of arbuscular mycorrhizal fungi by proteomic-based biotyping of spores using MALDI-TOF-MS
Cited by: 16
Author(s): Thomas Crossay, Cyril Antheaume, Dirk Redecker, Lucie Bon, Nicolas Chedri, Clément Richert, Linda Guentas, Yvon Cavaloc, Hamid Amir
Software Mentions: 3
Published: about 7 years ago

10.3390/molecules25184141

Transcriptomic and Proteomic Analysis of Clear Cell Foci (CCF) in the Human Non-Cirrhotic Liver Identifies Several Differentially Expressed Genes and Proteins with Functions in Cancer Cell Biology and Glycogen Metabolism
Cited by: 2
Author(s): Christoph Metzendorf, Katharina Wineberger, Jenny Rausch, Antonio Cigliano, Kristin Peters, Baodong Sun, Daniela Mennerich, Thomas Kietzmann, Diego F. Calvisi, Frank Dombrowski, Silvia Ribback
Software Mentions: 3
Published: about 4 years ago

10.4049/immunohorizons.1900098

Glucose-Regulated Protein 78 Autoantibodies Are Associated with Carotid Atherosclerosis in Chronic Obstructive Pulmonary Disease Patients
Cited by: 3
Author(s): Thi K. Tran-Nguyen, Divay Chandra, Kaiyu Yuan, Phani K. Patibandla, Khanh Nguyen, Palaniappan Sethu, Yingze Zhang, Jun Xue, James A. Mobley, Young-il Kim, Ali Shoushtari, Joseph K. Leader, Jessica Bon, Frank C. Sciurba, Steven R. Duncan
Software Mentions: 3
Published: almost 5 years ago

10.3390/vaccines8040655

Immune Checkpoint Blockade Enhances Immune Activity of Therapeutic Lung Cancer Vaccine
Cited by: 3
Author(s): Pournima Kadam, Ram Pyare Singh, Michael Davoodi, Jay M. Lee, Maie St. John, Sherven Sharma
Software Mentions: 3
Published: about 4 years ago

10.3389/fmicb.2019.01617

Reconditioning Degraded Mine Site Soils With Exogenous Soil Microbes: Plant Fitness and Soil Microbiome Outcomes
Cited by: 25
Author(s): Benjamin Moreira‐Grez, Miriam Muñoz‐Rojas, Khalil Kariman, Paul Storer, Anthony G. O'Donnell, Deepak Kumaresan, Andrew S. Whiteley
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-021-93619-5

Endothelial cell-derived Apelin inhibits tumor growth by altering immune cell localization
Cited by: 3
Author(s): Liuying Hu, Yumiko Hayashi, Hiroyasu Kidoya, Nobuyuki Takakura
Software Mentions: 3
Published: over 3 years ago

10.3390/molecules23102622

Monitoring Protein Dynamics in Protein O-Mannosyltransferase Mutants In Vivo by Tandem Fluorescent Protein Timers
Cited by: 9
Author(s): Joan Castells-Ballester, Ewa Zatorska, Matthias Meurer, Patrick Neubert, Anke Metschies, Michael Knop, Sabine Strahl
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-018-33433-8

Global pentapeptide statistics are far away from expected distributions
Cited by: 8
Author(s): Jarosław Poznański, Jan Topiński, Anna Muszewska, Konrad J. Dębski, Marta Hoffman-Sommer, Krzysztof Pawłowski, Marcin Grynberg
Software Mentions: 3
Published: about 6 years ago

10.1128/mBio.00062-19

Intestinal Epithelial Cells and the Microbiome Undergo Swift Reprogramming at the Inception of Colonic Citrobacter rodentium Infection
Cited by: 32
Author(s): Eve G D Hopkins, Theodoros I. Roumeliotis, Caroline Mullineaux-Sanders, Jyoti S. Choudhary, Gad Frankel
Software Mentions: 3
Published: over 5 years ago

10.3389/fnut.2019.00089

Listeria monocytogenes Biofilm Adaptation to Different Temperatures Seen Through Shotgun Proteomics
Cited by: 46
Author(s): Tiago Santos, Didier Viala, Christophe Chambon, Julia Esbelin, Michel Hébraud
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0252273

Multivariate visualization of the global COVID-19 pandemic: A comparison of 161 countries
Cited by: 11
Author(s): Jane Kimm Lii Teh, D.A. Bradley, Jack Bee Chook, Kee Huong Lai, Woo Teck Ang, Kok Lay Teo, Suat‐Cheng Peh
Software Mentions: 2
Published: over 3 years ago

10.1002/ece3.5020

A practical tool for assessing ecosystem services enhancement and degradation associated with invasive alien species
Cited by: 21
Author(s): Rocio Martinez‐Cillero, Simon Willcock, Alvaro Perez‐Diaz, Emma Joslin, Philippine Vergeer, Kelvin S.‐H. Peh
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0226854

Thrombospondin-I is a critical modulator in non-alcoholic steatohepatitis (NASH)
Cited by: 24
Author(s): Jessica Haewon Min-DeBartolo, Franklin J. Schlerman, Sandeep Akare, Wang Ju, James B. McMahon, Yutian Zhan, Jameel Syed, Wen He, Baohong Zhang, Robert V. Martinez
Software Mentions: 2
Published: almost 5 years ago

10.1002/evl3.42

Horizontal gene cluster transfer increased hallucinogenic mushroom diversity
Cited by: 66
Author(s): Hannah T. Reynolds, Vinod Vijayakumar, Emile Gluck‐Thaler, Hailee Brynn Korotkin, P. Brandon Matheny, Jason C. Slot
Software Mentions: 2
Published: almost 7 years ago

10.3390/genes12081211

Expanding the Search for Sperm Transmission Elements in the Mitochondrial Genomes of Bivalve Mollusks
Cited by: 3
Author(s): Donald T. Stewart, Brent M. Robicheau, Noor Youssef, Manuel A. Garrido-Ramos, Emily Chase, Sophie Breton
Software Mentions: 2
Published: over 3 years ago

10.3389/fonc.2020.565455

Identification of Early Recurrence Factors in Childhood and Adolescent B-Cell Acute Lymphoblastic Leukemia Based on Integrated Bioinformatics Analysis
Cited by: 7
Author(s): Yan Huang, Jiazheng Li, Yanxin Chen, Peifang Jiang, Lingyan Wang, Jianda Hu
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0247284

Clustering approach for the analysis of the fluorescent bioaerosol collected by an automatic detector
Cited by: 11
Author(s): Gintautas Daunys, Laura Šukienė, Lukas Vaitkevičius, Gediminas Valiulis, Mikhail Sofiev, Ingrida Šaulienė
Software Mentions: 2
Published: over 3 years ago

10.3389/fcimb.2021.627798

Rv3722c Promotes Mycobacterium tuberculosis Survival in Macrophages by Interacting With TRAF3
Cited by: 2
Author(s): Yingying Lei, Xiaojian Cao, Weize Xu, Bing Yang, Yangyang Xu, Wei Zhou, Shuang Dong, Qi‐Jun Wu, Khaista Rahman, Rohit Tyagi, Shuhong Zhao, Xi Chen, Gang Cao
Software Mentions: 1
Published: almost 4 years ago

Projects: cran: ggrepel

Papers Mentioning ggrepel 164