Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ggpubr

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggpubr

'ggplot2' Based Publication Ready Plots
20 versions
Latest release: almost 2 years ago
198 dependent packages
197,518 downloads last month

Papers Mentioning ggpubr 856

10.18632/aging.202739
Oral administration of Akkermansia muciniphila elevates systemic antiaging and anticancer metabolites
Cited by: 67
Author(s): Claudia Grajeda‐Iglesias, Sylvère Durand, Romain Daillère, Kristina Iribarren, Fabien Lemaître, Lisa Derosa, Fanny Aprahamian, Noélie Bossut, Nitharsshini Nirmalathasan, Frank Madeo, Laurence Zitvogel, Guido Kroemer
Software Mentions: 5
Published: over 3 years ago
10.1186/s10020-021-00345-9
Association of CASC18/miR-20a-3p/TGFB2 ceRNA axis with occult lymph node metastasis in tongue squamous cell carcinoma
Cited by: 5
Author(s): Bo Zhou, Yue Zhou, Ying Liu, Hailin Zhang, Huangxing Mao, Mingjing Peng, Anji Xu, Zan Li, Hui Wang, Haolei Tan, Huayi Ren, Xiao Yan Zhou, Ying Long
Software Mentions: 5
Published: over 3 years ago
10.1186/s10020-020-00253-4
Genomic imbalances in the placenta are associated with poor fetal growth
Cited by: 13
Author(s): Giulia Gobbo, Yue Yin, Sanaa Choufani, Emma Butcher, John Wei, Evica Rajcan‐Separovic, Hayley Bos, Peter von Dadelszen, Rosanna Weksberg, Wendy P. Robinson, Ryan K. C. Yuen
Software Mentions: 5
Published: almost 4 years ago
10.15252/msb.20209698
<scp>CEN</scp> ‐tools: an integrative platform to identify the contexts of essential genes
Cited by: 9
Author(s): Sumana Sharma, Cansu Dinçer, Paula Weidemüller, Gavin J. Wright, Evangelia Petsalaki
Software Mentions: 5
Published: about 4 years ago
10.1038/s41598-018-29267-z
Intrinsic Rhythmicity Predicts Synchronization-Continuation Entrainment Performance
Cited by: 26
Author(s): Trevor McPherson, Dorita S. Berger, Sankaraleengam Alagapan, Flavio Fröhlich
Software Mentions: 5
Published: over 6 years ago
10.7554/eLife.64977
Unique integrated stress response sensors regulate cancer cell susceptibility when Hsp70 activity is compromised
Cited by: 11
Author(s): Sara Sannino, Megan E. Yates, Mark E. Schurdak, Steffi Oesterreich, Adrian V. Lee, Peter Wipf, Jeffrey L. Brodsky
Software Mentions: 5
Published: over 3 years ago
10.1038/s41598-018-20262-y
Comparative analyses of co-evolving host-parasite associations reveal unique gene expression patterns underlying slavemaker raiding and host defensive phenotypes
Cited by: 15
Author(s): Austin Alleman, Barbara Feldmeyer, Susanne Foitzik
Software Mentions: 5
Published: almost 7 years ago
10.1038/s41598-017-08892-0
Development and assessment of a lysophospholipid-based deep learning model to discriminate geographical origins of white rice
Cited by: 14
Author(s): Nguyen Phuoc Long, Dong Kyu Lim, Changyeun Mo, Gi‐Young Kim, Sung Won Kwon
Software Mentions: 5
Published: over 7 years ago
10.1371/journal.pone.0243205
Neuropeptide S receptor gene Asn107 polymorphism in obese male individuals in Pakistan
Cited by: 3
Author(s): Aftab Ahmad, Fahad Almsned, Pasha Ghazal, Malik Waqar Ahmed, M. Saleet Jafri, Habib Bokhari
Software Mentions: 5
Published: almost 4 years ago
10.1038/s42003-021-01690-5
Development of a robust protocol for the characterization of the pulmonary microbiota
Cited by: 6
Author(s): Nathan Dumont-Leblond, Marc Veillette, Christine Racine, Philippe Joubert, Caroline Duchaine
Software Mentions: 5
Published: almost 4 years ago
10.3389/fonc.2021.616576
LncRNA FENDRR in Carcinoma-Associated Fibroblasts Regulates the Angiogenesis of Oral Squamous Cell Carcinoma Through the PI3K/AKT Pathway
Cited by: 4
Author(s): Yuming Xu, Erhui Jiang, Zhang Shao, Zhengjun Shang
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0246544
Swab pooling: A new method for large-scale RT-qPCR screening of SARS-CoV-2 avoiding sample dilution
Cited by: 21
Author(s): Ana Paula Christoff, Giuliano Netto Flores Cruz, Aline Fernanda Rodrigues Sereia, Dellyana Rodrigues Boberg, Daniela Carolina de Bastiani, Laís Eiko Yamanaka, Gislaine Fongaro, Patrícia Hermes Stoco, Maria Luiza Bazzo, Edmundo C. Grisard, Camila Hernandes, Luiz Felipe Valter de Oliveira
Software Mentions: 5
Published: almost 4 years ago
10.3390/vaccines9070694
Impact of Transcriptome and Gut Microbiome on the Response of HIV-1 Infected Individuals to a Dendritic Cell-Based HIV Therapeutic Vaccine
Cited by: 6
Author(s): Roque Pastor-Ibáñez, Francisco Díez-Fuertes, Sonsoles Sánchez-Palomino, José Alcamı́, Montserrat Plana, David Torrents, Lorna Leal, Felipe García
Software Mentions: 5
Published: over 3 years ago
10.3390/v13061044
Evolutionary Patterns of Codon Usage in Major Lineages of Porcine Reproductive and Respiratory Syndrome Virus in China
Cited by: 3
Author(s): Weixin Wu, Xinna Ge, Yongning Zhang, Jun Han, Xin Guo, Lei Zhou, Hanchun Yang
Software Mentions: 4
Published: over 3 years ago
10.1002/ece3.4421
Sex-specific prey partitioning in breeding piscivorous birds examined via a novel, noninvasive approach
Cited by: 10
Author(s): Bettina Thalinger, Johannes Oehm, Christiane Zeisler, Julia Vorhauser, Michael Traugott
Software Mentions: 4
Published: over 6 years ago
10.3389/fimmu.2020.573920
High Abundance of Intratumoral γδ T Cells Favors a Better Prognosis in Head and Neck Squamous Cell Carcinoma: A Bioinformatic Analysis
Cited by: 16
Author(s): Huanzi Lu, Daixiu Wei, Junyi Guo, Dikan Wang, Sheng Wen, Lisa Yang, Daowei Lin, Wenqiang Xie, Liling Wen, Juan Fang, Zhi Wang
Software Mentions: 4
Published: about 4 years ago
10.1093/database/baaa110
Applying graph database technology for analyzing perturbed co-expression networks in cancer
Cited by: 1
Author(s): Claire M. Simpson, Florian Gnad
Software Mentions: 4
Published: almost 5 years ago
10.3389/fimmu.2019.01625
Computational Analysis of HLA-presentation of Non-synonymous Recipient Mismatches Indicates Effect on the Risk of Chronic Graft-vs.-Host Disease After Allogeneic HSCT
Cited by: 8
Author(s): Jarmo Ritari, Kati Hyvärinen, Satu Koskela, Riitta Niittyvuopio, Anne Nihtinen, Urpu Salmenniemi, Matti Putkonen, Liisa Volin, Tony Kwan, Tomi Pastinen, Maija Itälä‐Remes, Jukka Partanen
Software Mentions: 4
Published: over 5 years ago
10.1186/s13054-019-2589-0
Relationship of mottling score, skin microcirculatory perfusion indices and biomarkers of endothelial dysfunction in patients with septic shock: an observational study
Cited by: 16
Author(s): Sigita Kazūne, Anastasija Caica, K. Volceka, Oļegs Šuba, Uldis Rubīns, Andris Grabovskis
Software Mentions: 4
Published: about 5 years ago
10.1038/s42003-021-02587-z
Probiotic Bifidobacterium longum supplied with methimazole improved the thyroid function of Graves’ disease patients through the gut-thyroid axis
Cited by: 14
Author(s): Dongxue Huo, Chaoping Cen, Haibo Chang, Qianying Ou, Shuaiming Jiang, Pan Yingjie, Kaining Chen, Jiachao Zhang
Software Mentions: 4
Published: about 3 years ago
10.3389/fmicb.2020.01740
Abundant Taxa and Favorable Pathways in the Microbiome of Soda-Saline Lakes in Inner Mongolia
Cited by: 20
Author(s): Dahe Zhao, Shengjie Zhang, Qiong Xue, Junyu Chen, Jian Zhou, Feiyue Cheng, Ming Li, Yaxin Zhu, Haiying Yu, Songnian Hu, Yanning Zheng, Shuang‐Jiang Liu, Hua Xiang
Software Mentions: 4
Published: over 4 years ago
10.1093/cid/ciz1186
Cotrimoxazole Prophylaxis Increases Resistance Gene Prevalence and α-Diversity but Decreases β-Diversity in the Gut Microbiome of Human Immunodeficiency Virus–Exposed, Uninfected Infants
Cited by: 33
Author(s): Alaric W. D’Souza, Eshia Moodley-Govender, Bertram M. Berla, Tejas Kelkar, Bin Wang, Xiaoqing Sun, Brodie Daniels, Anna Coutsoudis, Indi Trehan, Gautam Dantas
Software Mentions: 4
Published: almost 5 years ago
10.3390/ani11041081
Flow Cytometric Assessment of the Viability and Functionality of Uterine Polymorphonuclear Leukocytes in Postpartum Dairy Cows
Cited by: 3
Author(s): Leen Lietaer, Kristel Demeyere, Stijn Heirbaut, Evelyne Meyer, G. Opsomer, Osvaldo Bogado Pascottini
Software Mentions: 4
Published: over 3 years ago
10.3389/fmicb.2018.02922
Occurrence and Fate of Ultramicrobacteria in a Full-Scale Drinking Water Treatment Plant
Cited by: 8
Author(s): Jie Liu, Renxin Zhao, Jiayu Zhang, Guijuan Zhang, Ke Yu, Xiaoyan Li, Bing Li
Software Mentions: 4
Published: almost 6 years ago
10.3389/fmicb.2019.01359
Host Gender and Androgen Levels Regulate Gut Bacterial Taxa in Pigs Leading to Sex-Biased Serum Metabolite Profiles
Cited by: 26
Author(s): Maozhang He, Jun Gao, Jinyuan Wu, Yunyan Zhou, Hao Fu, Shanlin Ke, Hui Yang, Congying Chen, Lusheng Huang
Software Mentions: 4
Published: over 5 years ago
10.18632/aging.103753
Eight immune-related genes predict survival outcomes and immune characteristics in breast cancer
Cited by: 2
Author(s): Xu Han, Gangjian Wang, Lili Zhu, Liu Hong, Bingjie Li
Software Mentions: 4
Published: over 4 years ago
10.1016/j.celrep.2019.12.049
Trypanosoma brucei ATR Links DNA Damage Signaling during Antigenic Variation with Regulation of RNA Polymerase I-Transcribed Surface Antigens
Cited by: 21
Author(s): Jennifer Ann Black, Kathryn Crouch, Leandro Lemgruber, Craig Lapsley, Nicholas J. Dickens, Luíz Ricardo Orsini Tosi, Jeremy C. Mottram, Richard McCulloch
Software Mentions: 4
Published: almost 5 years ago
10.3389/fmicb.2020.549531
The Analysis of Field Strains Isolated From Food, Animal and Clinical Sources Uncovers Natural Mutations in Listeria monocytogenes Nisin Resistance Genes
Cited by: 8
Author(s): Joseph Wambui, Athmanya K. Eshwar, Mariella Aalto-Araneda, Anna K Pöntinen, Marc J. A. Stevens, Patrick Murigu Kamau Njage, Taurai Tasara
Software Mentions: 4
Published: about 4 years ago
10.3389/fmicb.2021.642730
The Composition of Root-Associated Bacteria and Fungi of Astragalus mongholicus and Their Relationship With the Bioactive Ingredients
Cited by: 9
Author(s): Yanmei Li, Yang Liu, Hui Zhang, Yan Yang, Gehong Wei, Zhe‐Fei Li
Software Mentions: 4
Published: over 3 years ago
10.3389/fmicb.2020.581072
Distribution of Antibiotic-Resistant Enterobacteriaceae Pathogens in Potable Spring Water of Eastern Indian Himalayas: Emphasis on Virulence Gene and Antibiotic Resistance Genes in Escherichia coli
Cited by: 22
Author(s): Ashish Kumar Singh, Saurav Das, Santosh Kumar, Varsha Rani Gajamer, Ishfaq Nabi Najar, Yangchen Doma Lepcha, Hare Krishna Tiwari, Samer Singh
Software Mentions: 4
Published: about 4 years ago
10.3389/fmicb.2021.669883
The Seasonal Flux and Fate of Dissolved Organic Carbon Through Bacterioplankton in the Western North Atlantic
Cited by: 11
Author(s): Nicholas Baetge, Michael J. Behrenfeld, James Fox, Kimberly H. Halsey, Kristina D. A. Mojica, Anai Novoa, Brandon M. Stephens, Craig A. Carlson
Software Mentions: 4
Published: over 3 years ago
10.3389/fmolb.2021.690500
TRPV4 is a Prognostic Biomarker that Correlates with the Immunosuppressive Microenvironment and Chemoresistance of Anti-Cancer Drugs
Cited by: 14
Author(s): Kai Wang, Xingjun Feng, Lingzhi Zheng, Zeying Chai, Ji Hee Yu, Xinxin You, Xiaodan Li, Xiaodong Cheng
Software Mentions: 4
Published: over 3 years ago
10.3390/cancers13102300
Plasma Protein Biomarkers Associated with Higher Ovarian Cancer Risk in BRCA1/2 Carriers
Cited by: 5
Author(s): Hee-Sung Ahn, Jung Ho, Jeesuk Yu, Jeonghun Yeom, Sanha Lee, Soo-Young Hur, Yoon Young Jung, Kyunggon Kim, Youn Jin Choi
Software Mentions: 4
Published: over 3 years ago
10.3389/fmolb.2021.687576
A Comprehensive Analysis of the Downregulation of miRNA-1827 and Its Prognostic Significance by Targeting SPTBN2 and BCL2L1 in Ovarian Cancer
Cited by: 7
Author(s): Penghui Feng, Zhitong Ge, Zaixin Guo, Lin Lin, Qi Yu
Software Mentions: 4
Published: over 3 years ago
10.3390/cancers12040892
Integrated Analysis of RNA-Binding Proteins in Glioma
Cited by: 43
Author(s): Zhixing Wang, Wanjun Tang, Jing Yuan, Boqin Qiang, Wei Han, Xiaozhong Peng
Software Mentions: 4
Published: over 4 years ago
10.3389/fmolb.2021.708127
Glucotoxicity Activation of IL6 and IL11 and Subsequent Induction of Fibrosis May Be Involved in the Pathogenesis of Islet Dysfunction
Cited by: 6
Author(s): Laiwei Lu, Lili Zhuang, Xiaodong Shen, Liyong Yang
Software Mentions: 4
Published: about 3 years ago
10.3390/cancers11040561
Expression Profiling of Calcium Channels and Calcium-Activated Potassium Channels in Colorectal Cancer
Cited by: 47
Author(s): İbrahim Şehitoğlu, Hassan Dakik, Christophe Vandier, Romain Chautard, Gilles Paintaud, Frédéric Mazurier, Thierry Lecomte, Maxime Guéguinou, William Raoul
Software Mentions: 4
Published: over 5 years ago
10.1371/journal.pone.0252026
Differential association between inflammatory cytokines and multiorgan dysfunction in COVID-19 patients with obesity
Cited by: 8
Author(s): Marie-Agnès Dragon-Durey, Xiaoyi Chen, Amos Kirilovsky, Nadine Benhamouda, Carine El Sissy, Jules Russick, Etienne Charpentier, Yannick Binois, Florence Marliot, Maxime Meylan, Clémence Granier, Hélène Péré, Antonin Saldmann, Bastien Rance, Anne Sophie Jannot, Stéphanie Baron, M. Chebbi, Antoine Fayol, Nathalie Josseaume, Claire Rives‐Lange, Pierre‐Louis Tharaux, Bernard Cholley, Jean‐Luc Diehl, Jean‐Benoît Arlet, Michel Azizi, Alexandre Karras, Sébastien Czernichow, David Smadja, Jean‐Sébastien Hulot, Isabelle Cremer, Éric Tartour, Élie Mousseaux, Franck Pagès
Software Mentions: 4
Published: over 3 years ago
10.3390/ani11072107
Activity Budget Comparisons Using Long-Term Observations of a Group of Bottlenose Dolphins (Tursiops truncatus) under Human Care: Implications for Animal Welfare
Cited by: 9
Author(s): Tim Huettner, Sandra Dollhaeupl, Ralph Simon, Katrin Baumgärtner, Lorenzo von Fersen
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0248759
Impact of elevated air temperature and drought on pollen characteristics of major agricultural grass species
Cited by: 6
Author(s): Stephan Jung, Nicole Estrella, Michael W. Pfaffl, Stephan Hartmann, Franziska Ewald, Annette Menzel
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0193958
Grass pollen production and group V allergen content of agriculturally relevant species and cultivars
Cited by: 20
Author(s): Stephan Jung, Nicole Estrella, Michael W. Pfaffl, Stephan Hartmann, Ellinor Handelshauser, Annette Menzel
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pone.0226193
Ultra-deep massively parallel sequencing with unique molecular identifier tagging achieves comparable performance to droplet digital PCR for detection and quantification of circulating tumor DNA from lung cancer patients
Cited by: 15
Author(s): Le Son Tran, Hong-Anh Thi Pham, Van Thi Thanh Tran, Thuy Thi Thu Tran, Anh-Thu Huynh Dang, Dinh-Thong Vu Le, Son-Lam Nguyen, Ngoc-Vu Nguyen, Tuan S. Nguyen, Binh Thanh Vo, Hong-Thuy Thi Dao, Nguyen Huu Nguyen, Thuy Tran, Chu Van Nguyen, Phuong Cam Pham, Anh Tuan Dang-Mai, Thien Kim Dinh-Nguyen, Vu Hien Phan, Thanh-Thuy Thi, Kiet Truong Dinh, Han Ngoc, Minh-Duy Phan, Hoa Giang, Hoai-Nghia Nguyen
Software Mentions: 4
Published: almost 5 years ago
10.3389/fphar.2021.653525
CYP3A5 and UGT1A9 Polymorphisms Influence Immunosuppressive Therapy in Pediatric Kidney Transplant Recipients
Cited by: 6
Author(s): Paola Krall, Dominique Yáñez, Angélica Rojo, Ángela Delucchi, Miguel Córdova, Jorge Morales, Pía Boza, Alonso de la Rivera, Natalie Espinoza, Natalia Armijo, Luis E. Castañeda, Mauricio J. Farfán, Carolina Salas
Software Mentions: 4
Published: over 3 years ago
10.3389/fphys.2020.00311
Exercise Reverses the Alterations in Gut Microbiota Upon Cold Exposure and Promotes Cold-Induced Weight Loss
Cited by: 8
Author(s): Yan Meng, Lina Chen, Lin Wei, Hongjuan Wang, Guangming Xu, Xiquan Weng
Software Mentions: 4
Published: over 4 years ago
10.3389/fpls.2021.650400
Characterization and Mapping of Spot Blotch in Triticum durum–Aegilops speltoides Introgression Lines Using SNP Markers
Cited by: 6
Author(s): Jashanpreet Kaur, Jaspal Kaur, G. S. Dhillon, Harmandeep Kaur, Jasvir Singh, Ritu Bala, Puja Srivastava, Satinder Kaur, Achla Sharma, Parveen Chhuneja
Software Mentions: 4
Published: over 3 years ago
10.3389/fpls.2020.588739
Temperature Shift Between Vineyards Modulates Berry Phenology and Primary Metabolism in a Varietal Collection of Wine Grapevine
Cited by: 16
Author(s): Kelem Gashu, Noga Sikron Persi, Elyashiv Drori, Eran Harcavi, Nurit Agam, Amnon Bustan, Aaron Fait
Software Mentions: 4
Published: almost 4 years ago
10.1155/2020/3275315
Next-Generation Sequencing Characterizes the Landscape of Somatic Mutations and Pathways in Metastatic Bile Tract Carcinoma
Cited by: 1
Author(s): Qi Li, Qifan Zhang, Xiangdong Cheng, Xie Weng, Mian Chen, Xiaoyun Hu, Jing Huang, Jinzhang Chen
Software Mentions: 4
Published: about 4 years ago
10.3389/fvets.2020.519601
Management Practices Associated With Prevalence of Lameness in Lambs in 2012–2013 in 1,271 English Sheep Flocks
Cited by: 3
Author(s): Katharine E. Lewis, Laura Green
Software Mentions: 4
Published: about 4 years ago
10.2217/fvl-2020-0256
Epidemiologic features and clinical course of COVID-19: a retrospective analysis of 19 patients in Germany
Cited by: 1
Author(s): Sara Elgamasy, Eman El-Sayed Sakr, Mohamed Gomaa Kamel, Sherief Ghozy, Ghadeer Gamal Elsayed, Mostafa Mahmoud Fahmy, Ahmed Ghazy, Mohamed M. Ibrahim, Mostafa Ebraheem Morra
Software Mentions: 4
Published: over 3 years ago
10.3390/genes11070794
Co-Expression Networks for Causal Gene Identification Based on RNA-Seq Data of Corynebacterium pseudotuberculosis
Cited by: 3
Author(s): Edian F. Franco, Pratip Rana, Ana Lídia Queiroz Cavalcante, Artur da Costa da Luiz Silva, Anne Cybelle Pinto Gomide, Adriana Ribeiro Carneiro Folador, Vasco Azevedo, Preetam Ghosh, Rommel Thiago Jucá Ramos
Software Mentions: 4
Published: over 4 years ago
10.3390/genes11080838
Insights into the Genetic Architecture of Bran Friability and Water Retention Capacity, Two Important Traits for Whole Grain End-Use Quality in Winter Wheat
Cited by: 3
Author(s): Sviatoslav Navrotskyi, Vikas Belamkar, P. S. Baenziger, Devin J. Rose
Software Mentions: 4
Published: over 4 years ago
10.3390/genes12030332
Application of Genomics to Understand Salt Tolerance in Lentil
Cited by: 7
Author(s): D. R. R. P. Dissanayake, Noel O. I. Cogan, K. F. Smith, Sukhjiwan Kaur
Software Mentions: 4
Published: over 3 years ago
10.18632/aging.203049
Construction of a novel mRNA-miRNA-lncRNA network and identification of potential regulatory axis associated with prognosis in colorectal cancer liver metastases
Cited by: 8
Author(s): Lu Chen, Xiaochun Luo, Xing Cheng, Yonghuan Mao, Yuting Xu, Wenjie Gao, Wulin Wang, Tian Zhan, Guoguang Wang, Zhengxia Liu, Chang-Feng Yu
Software Mentions: 4
Published: over 3 years ago
10.3390/genes12091375
N6-Methyladenosine-Related lncRNA Signature Predicts the Overall Survival of Colorectal Cancer Patients
Cited by: 12
Author(s): Wei Song, Jun Ren, Wenzheng Yuan, Rensheng Xiang, Yuhang Ge, Tao Fu
Software Mentions: 4
Published: about 3 years ago
10.1007/s00401-020-02218-7
Molecular characterization of CNS paragangliomas identifies cauda equina paragangliomas as a distinct tumor entity
Cited by: 17
Author(s): Leonille Schweizer, Felix Thierfelder, Christian Thomas, Patrick Soschinski, Abigail K Suwala, Damian Stichel, Annika K. Wefers, Lars Wessels, Martin Misch, Hee-Yeong Kim, Ruben Jödicke, Daniel Teichmann, David Kaul, Johannes Kahn, Michael Bockmayr, Martin Hasselblatt, Alexander Younsi, Andreas Unterberg, Bettina Knie, Jan Walter, Diaa Al Safatli, Sven-Axel May, Andreas Jödicke, Georgios Ntoulias, Dag Moskopp, Peter Vajkoczy, Frank L. Heppner, David Capper, Wolfgang Hartmann, Christian Hartmann, Andreas von Deimling, David Reuß, Anne Schöler, Arend Koch
Software Mentions: 4
Published: about 4 years ago
10.3390/plants10040810
LED and HPS Supplementary Light Differentially Affect Gas Exchange in Tomato Leaves
Cited by: 9
Author(s): Onofrio Davide Palmitessa, Aina E. Prinzenberg, Elias Kaiser, E. Heuvelink
Software Mentions: 4
Published: over 3 years ago
10.1093/gbe/evab053
The Genome of the Margined White Butterfly (<i>Pieris macdunnoughii</i>): Sex Chromosome Insights and the Power of Polishing with PoolSeq Data
Cited by: 4
Author(s): Rachel Steward, Yu Okamura, Carol L. Boggs, Heiko Vogel, Christopher W. Wheat
Software Mentions: 4
Published: over 3 years ago
10.1186/s13073-021-00826-w
Comprehensive molecular characterization of gastric cancer patients from phase II second-line ramucirumab plus paclitaxel therapy trial
Cited by: 16
Author(s): Seung Tae Kim, K. Jason, Sung Yong Oh, Kyung Kim, Jung Yong Hong, Won Ki Kang, Jeeyun Lee
Software Mentions: 4
Published: almost 4 years ago
10.1186/s13007-020-00605-5
High-throughput method for detection and quantification of lesions on leaf scale based on trypan blue staining and digital image analysis
Cited by: 14
Author(s): Emina Mulaosmanovic, Tobias U. T. Lindblom, Marie Bengtsson, Sofia Windstam, Lars Mogren, Salla Marttila, Hartmut Stützel, Beatrix Alsanius
Software Mentions: 4
Published: over 4 years ago
10.1098/rstb.2019.0808
Genetic sexing strains for the population suppression of the mosquito vector <i>Aedes aegypti</i>
Cited by: 22
Author(s): Panagiota Koskinioti, Antonios A. Augustinos, Danilo O. Carvalho, Muhammad Misbah-ul-Haq, Gulizar Pillwax, Lucia Duran de la Fuente, Gustavo Salvador-Herranz, Rafael Argilés Herrero, Kostas Bourtzis
Software Mentions: 4
Published: almost 4 years ago
10.7717/peerj.8938
Diffusion tubes: a method for the mass culture of ctenophores and other pelagic marine invertebrates
Cited by: 11
Author(s): Wyatt L. Patry, MacKenzie M Bubel, Cypress Hansen, Thomas Knowles
Software Mentions: 4
Published: over 4 years ago
10.7717/peerj.11286
Intraspecific morphological variation of <i>Bellidiastrum michelii</i> (Asteraceae) along a 1,155 m elevation gradient in the Tatra Mountains
Cited by: 3
Author(s): Piotr Kiełtyk
Software Mentions: 4
Published: over 3 years ago
10.3390/insects11060390
Ecological Drivers and Sex-Based Variation in Body Size and Shape in the Queensland Fruit Fly, Bactrocera tryoni (Diptera: Tephritidae)
Cited by: 3
Author(s): Yufei Zhou, Juanita Rodríguez, Nicole Fisher, Renee A. Catullo
Software Mentions: 4
Published: over 4 years ago
10.3390/insects11100664
Chronic High Glyphosate Exposure Delays Individual Worker Bee (Apis mellifera L.) Development under Field Conditions
Cited by: 18
Author(s): Richard Odemer, Abdulrahim Alkassab, Gabriela Bischoff, Malte Frommberger, Anna Wernecke, Ina Wirtz, Jens Pistorius, Franziska Odemer
Software Mentions: 4
Published: about 4 years ago
10.7717/peerj.11948
Quantifying bite force in coexisting tayassuids and feral suids: a comparison between morphometric functional proxies and in vivo measurements
Cited by: 1
Author(s): Fernando Lencastre Sicuro, Luiz Flamarion B. Oliveira, Carla Deonísia Hendges, Carlos Fonseca
Software Mentions: 4
Published: over 3 years ago
10.1186/s40635-020-00335-x
Alkaline phosphatase in pulmonary inflammation—a translational study in ventilated critically ill patients and rats
Cited by: 6
Author(s): Jenny Juschten, Sarah A. Ingelse, Lieuwe D. J. Bos, Armand R. J. Girbes, Nicole P. Juffermans, Tom van der Poll, Marcus J. Schultz, Pieter R. Tuinman
Software Mentions: 4
Published: almost 4 years ago
10.1172/jci.insight.151621
Combinatorial transcription factor profiles predict mature and functional human islet α and β cells
Cited by: 21
Author(s): Shristi Shrestha, Diane Saunders, John T. Walker, Joan Camunas-Soler, Xiao-Qing Dai, Rachana Haliyur, Radhika Aramandla, Greg Poffenberger, Nripesh Prasad, Rita Bottino, Roland Stein, Jean‐Philippe Cartailler, Stephen C. J. Parker, Patrick E. MacDonald, Shawn Levy, Alvin C. Powers, Marcela Briššová
Software Mentions: 4
Published: about 3 years ago
10.1016/j.isci.2021.102889
LiquidCNA: Tracking subclonal evolution from longitudinal liquid biopsies using somatic copy number alterations
Cited by: 5
Author(s): Eszter Lakatos, Helen Hockings, Maximilian Mossner, Weini Huang, Michelle Lockley, Trevor A. Graham
Software Mentions: 4
Published: over 3 years ago
10.7717/peerj.11598
Effects of short-term grazing prohibition on soil physical and chemical properties of meadows in Southwest China
Cited by: 6
Author(s): Guiqing Zhu, Chaoxiang Yuan, Hede Gong, Yanling Peng, Changjiang Huang, Chuansheng Wu, Huachao Duan
Software Mentions: 4
Published: over 3 years ago
10.3390/nu12113450
Metabolomic and Metataxonomic Fingerprinting of Human Milk Suggests Compositional Stability over a Natural Term of Breastfeeding to 24 Months
Cited by: 7
Author(s): Natalie Shenker, Alvaro Perdones‐Montero, Adam Burke, Sarah Stickland, Julie A. K. McDonald, Kate Alexander-Hardiman, James M. Flanagan, Zoltan Takáts, Simon Cameron
Software Mentions: 4
Published: about 4 years ago
10.1111/jcmm.15505
Asiaticoside might attenuate bleomycin‐induced pulmonary fibrosis by activating cAMP and Rap1 signalling pathway assisted by A2AR
Cited by: 18
Author(s): Jing Luo, Ting Zhang, Ce Zhu, Junwei Sun, Wenjing Zhu, Wenxiu Ai, Xiaoying Huang, Xiaobing Wang
Software Mentions: 4
Published: over 4 years ago
10.7717/peerj.11820
Clinical and prognostic relevance of <i>CXCL12</i> expression in acute myeloid leukemia
Cited by: 2
Author(s): Shi-sen Wang, Zi‐jun Xu, Yue Jin, Ji‐chun Ma, Pei‐hui Xia, Xiang‐mei Wen, Zhen-wei Mao, Lin Jiang, Jun Qian
Software Mentions: 4
Published: over 3 years ago
10.3390/jcm9072036
Multimodal Approach to Assessment of Fecal Microbiota Donors based on Three Complementary Methods
Cited by: 2
Author(s): Jarosław Biliński, Mikołaj Dziurzyński, Paweł Grzesiowski, Edyta Podsiadły, Anna Stelmaszczyk-Emmel, Tomasz Dzieciątkowski, Łukasz Dziewit, Grzegorz W. Basak
Software Mentions: 4
Published: over 4 years ago
10.1111/1365-2745.13370
Plant ontogeny determines strength and associated plant fitness consequences of plant‐mediated interactions between herbivores and flower visitors
Cited by: 12
Author(s): Quint Rusman, Dani Lucas‐Barbosa, Kamrul Hassan, Erik H. Poelman
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.ppat.1008154
Disrupting MLV integrase:BET protein interaction biases integration into quiescent chromatin and delays but does not eliminate tumor activation in a MYC/Runx2 mouse model
Cited by: 10
Author(s): Lorenz M. Loyola, Vasudevan Achuthan, Kathryn Gilroy, Gillian Borland, Anna Kilbey, Nancy MacKay, Margaret Bell, Jodie Hay, Sriram Aiyer, Dylan Fingerman, Rodrigo A. Villanueva, Ewan R. Cameron, Christine A. Kozak, Alan Engelman, James C. Neil, Monica J. Roth
Software Mentions: 4
Published: almost 5 years ago
10.1002/ece3.6989
Effects of maternal genotypic identity and genetic diversity of the red mangrove <i>Rhizophora mangle</i> on associated soil bacterial communities: A field‐based experiment
Cited by: 9
Author(s): Hayley Craig, John Paul Kennedy, Donna J. Devlin, Richard D. Bardgett, Jennifer K. Rowntree
Software Mentions: 4
Published: about 4 years ago
10.1098/rsos.191024
Variation in life-history traits among <i>Daphnia</i> and its relationship to species-level responses to phosphorus limitation
Cited by: 8
Author(s): Rachel Hartnett
Software Mentions: 4
Published: over 5 years ago
10.1186/s12931-021-01755-3
Dysregulation of COVID-19 related gene expression in the COPD lung
Cited by: 22
Author(s): Alastair Watson, Lisa Öberg, B. Angermann, Cosma Spalluto, Michael Hühn, Hannah Burke, Doriana Cellura, Anna Freeman, Daniel Muthas, Damla Etal, Graham Belfield, Fredrik Karlsson, Karl Nordström, Kris Ostridge, Karl Staples, André Freitas
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-020-61659-y
Short and long period growth markers of enamel formation distinguish European Pleistocene hominins
Cited by: 16
Author(s): Mario Modesto‐Mata, MC Dean, Rodrigo S. Lacruz, Timothy Bromage, Cecilia García‐Campos, Marina Martínez de Pinillos, Laura Martín‐Francés, María Martinón‐Torres, Eudald Carbonell, Juan Luís Arsuaga, José Marı́a Bermúdez de Castro
Software Mentions: 4
Published: over 4 years ago
10.1038/s41598-020-62848-5
Optimization of cell viability assays to improve replicability and reproducibility of cancer drug sensitivity screens
Cited by: 89
Author(s): Peter Larsson, Hanna Engqvist, Jana Biermann, Elisabeth Werner Rönnerman, Eva Forssell-Aronsson, Anikó Kovács, Per Karlsson, Khalil Helou, Toshima Z. Parris
Software Mentions: 4
Published: over 4 years ago
10.3390/molecules24193629
Level of Biogenic Amines in Red and White Wines, Dietary Exposure, and Histamine-Mediated Symptoms upon Wine Ingestion
Cited by: 27
Author(s): Francesco Esposito, Paolo Montuori, M. Schettino, Salvatore Velotto, Tommaso Stasi, Raffaele Romano, Teresa Cirillo
Software Mentions: 4
Published: about 5 years ago
10.1021/acs.jproteome.0c00992
Human Bone Proteomes before and after Decomposition: Investigating the Effects of Biological Variation and Taphonomic Alteration on Bone Protein Profiles and the Implications for Forensic Proteomics
Cited by: 21
Author(s): Hayley L. Mickleburgh, Ed C. Schwalbe, Andrea Bonicelli, Haruka Mizukami, Federica Sellitto, Sefora Starace, Daniel J. Wescott, David Carter, Noemi Procopio
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-020-69830-1
Clinical outcomes and prognostic factors of robotic assisted rectal cancer resection alone versus robotic rectal cancer resection with natural orifice extraction: a matched analysis
Cited by: 7
Author(s): Dongning Liu, Rui Luo, Zhikai Wan, Weiquan Zhu, Peng He, Shanping Ye, Cheng Tang, Lei Xiong, Taiyuan Li
Software Mentions: 4
Published: over 4 years ago
10.3390/molecules25102353
Sexual Dimorphism in Energy Metabolism of Wistar Rats Using Data Analysis
Cited by: 12
Author(s): Andrea Leškaničová, Olga Chovancova, Marián Babinčák, Ľudmila Verbóová, Zuzana Benetinová, Denisa Maceková, Jozef Kostolny, B Smajda, Terézia Kisková
Software Mentions: 4
Published: over 4 years ago
10.3390/microorganisms7110516
The Signature Microbiota Drive Rumen Function Shifts in Goat Kids Introduced to Solid Diet Regimes
Cited by: 34
Author(s): Xiaokang Lv, Jianmin Chai, Qiyu Diao, Wenqin Huang, Yan Zhuang, Naifeng Zhang
Software Mentions: 4
Published: about 5 years ago
10.18632/aging.103227
MiR-1908/EXO1 and MiR-203a/FOS, regulated by scd1, are associated with fracture risk and bone health in postmenopausal diabetic women
Cited by: 27
Author(s): Yisheng Chen, Xueran Kang, Zun-Qiang Zhou, Yang Jiang, Xin Qi, Chenting Ying, Yunpeng Zhang, Jie Tao
Software Mentions: 4
Published: over 4 years ago
10.1038/s41598-021-84886-3
Listener’s personality traits predict changes in pupil size during auditory language comprehension
Cited by: 6
Author(s): Isabell Hubert Lyall, Juhani Järvikivi
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-021-84774-w
Culture and differentiation of rabbit intestinal organoids and organoid-derived cell monolayers
Cited by: 8
Author(s): Egi Kardia, Michael Frese, Elena Smertina, Tanja Strive, Xi‐Lei Zeng, Mary K. Estes, Robyn N. Hall
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-021-87069-2
White matter abnormalities in adults with bipolar disorder type-II and unipolar depression
Cited by: 6
Author(s): Anna Manelis, Adriane M. Soehner, Yaroslav Halchenko, Skye Satz, Rachel Ragozzino, Mora M. Lucero, Holly A. Swartz, Mary L. Phillips, Amelia Versace
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-021-90198-3
Association of Candida albicans and Cbp+ Streptococcus mutans with early childhood caries recurrence
Cited by: 25
Author(s): Bruna Albuquerque Garcia, Natalia Acosta, Scott L. Tomar, Luiz Fernando Würdig Roesch, José A. Lemos, Leda Mugayar, Jacqueline Abranches
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-021-92912-7
MYD88, NFKB1, and IL6 transcripts overexpression are associated with poor outcomes and short survival in neonatal sepsis
Cited by: 12
Author(s): Nouran B. AbdAllah, Eman A. Toraih, Essam Al Ageeli, Hala F. Elhagrasy, Nawal S. Gouda, Manal S. Fawzy, Ghada M. Helal
Software Mentions: 4
Published: over 3 years ago
10.1099/mgen.0.000266
Caribbean multi-centre study of Klebsiella pneumoniae: whole-genome sequencing, antimicrobial resistance and virulence factors
Cited by: 18
Author(s): Eva Heinz, Richard Brindle, Andrina Morgan-McCalla, Keisha Peters, Nicholas R. Thomson
Software Mentions: 4
Published: over 5 years ago
10.1038/s41598-021-97909-w
Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation
Cited by: 7
Author(s): Siv Anita Hegre, Helle Samdal, Antonin Klima, Endre Bakken Stovner, Kristin G. Nørsett, Nina Beate Liabakk, Lene Christin Olsen, Konika Chawla, Per Arne, Pål Sætrom
Software Mentions: 4
Published: about 3 years ago
10.1128/mBio.01937-21
Mucosal Bacteria Modulate Candida albicans Virulence in Oropharyngeal Candidiasis
Cited by: 16
Author(s): Martinna Bertolini, Roberto Vázquez-Muñoz, Linda Archambault, Siddharth Shah, João Gabriel Silva Souza, Raphael Cavalcante Costa, Angela Thompson, Yanjiao Zhou, Takanori Sobue, Anna Dongari-Bagtzoglou
Software Mentions: 4
Published: about 3 years ago
10.1128/mSystems.00150-18
Marine Sponges as <i>Chloroflexi</i> Hot Spots: Genomic Insights and High-Resolution Visualization of an Abundant and Diverse Symbiotic Clade
Cited by: 61
Author(s): Kristina Bayer, Martin T. Jahn, Beate M. Slaby, Lucas Moitinho‐Silva, Ute Hentschel
Software Mentions: 4
Published: about 6 years ago
10.1186/s12967-020-02527-1
Development and validation of a cancer stem cell-related signature for prognostic prediction in pancreatic ductal adenocarcinoma
Cited by: 15
Author(s): Zengyu Feng, Minmin Shi, Kexian Li, Yang Ma, Lingxi Jiang, Hao Chen, Chenghong Peng
Software Mentions: 4
Published: about 4 years ago
10.1186/s12935-020-01281-0
Long noncoding RNAs as potential biomarkers in retinoblastoma: a systematic review and meta-analysis
Cited by: 8
Author(s): Jiali Wu, Dashi Qian, Xiaodong Sun
Software Mentions: 4
Published: over 4 years ago
10.1042/BSR20211280
Identification of hub genes in colorectal cancer based on weighted gene co-expression network analysis and clinical data from The Cancer Genome Atlas
Cited by: 23
Author(s): Yu Zhang, Jia Luo, Zhe Liu, Xudong Li, Ying Ma, Bohang Zhang, Yuxuan Chen, Xiaofeng Li, Zhi-Guo Feng, Ningning Yang, Dayun Feng, Lei Wang, Xiu–Peng Song
Software Mentions: 4
Published: over 3 years ago
10.1155/2021/6656943
Glial Cell-Derived Neurotrophic Factor Functions as a Potential Candidate Gene in Obstructive Sleep Apnea Based on a Combination of Bioinformatics and Targeted Capture Sequencing Analyses
Cited by: 3
Author(s): Yuanyuan Cao, Qing Zhu, Xintian Cai, Ting Wu, Xiayire Aierken, Ayguzal Ahmat, Shasha Li, Nanfang Li
Software Mentions: 4
Published: almost 4 years ago
10.3390/biology10080811
Polyploidy Improves Photosynthesis Regulation within the Ranunculus auricomus Complex (Ranunculaceae)
Cited by: 7
Author(s): Fuad Bahrul Ulum, Franz Hadaček, Elvira Hörandl
Software Mentions: 4
Published: over 3 years ago