cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3390/antibiotics9040177

Genomic Characterization of Antimicrobial Resistance, Virulence, and Phylogeny of the Genus Ochrobactrum
Cited by: 9
Author(s): Yael Yagel, S Ruth Sestito, Yair Motro, Anat Shnaiderman‐Torban, Boris Khalfin, Orly Sagi, Shiri Navon-Venezia, Amir Steinman, Jacob Moran-Gilad
Software Mentions: 1
Published: over 6 years ago

10.3390/v13081649

Serological Detection of SARS-CoV-2 Antibodies in Naturally-Infected Mink and Other Experimentally-Infected Animals
Cited by: 6
Author(s): Francisco J. Berguido, Peter D. Burbelo, Alessio Bortolami, Francesco Bonfante, Kerstin Wernike, Donata Hoffmann, Anne Balkema‐Buschmann, Martin Beer, William G. Dundon, Charles Euloge Lamien, Giovanni Cattoli
Software Mentions: 1
Published: about 5 years ago

10.1136/bmjgh-2019-002187

Patient pathways of tuberculosis care-seeking and treatment: an individual-level analysis of National Health Insurance data in Taiwan
Cited by: 10
Author(s): Chu-Chang Ku, Chien‐Chou Chen, Simon Dixon, Hsien Ho Lin, Peter J. Dodd
Software Mentions: 1
Published: over 6 years ago

10.1136/bmjgh-2019-001755

The inverse relationship between national food security and annual cholera incidence: a 30-country analysis
Cited by: 8
Author(s): Aaron Richterman, Andrew S. Azman, Georgery Constant, Louise C Ivers
Software Mentions: 1
Published: about 7 years ago

10.3390/v13061118

Estimates and Determinants of SARS-Cov-2 Seroprevalence and Infection Fatality Ratio Using Latent Class Analysis: The Population-Based Tirschenreuth Study in the Hardest-Hit German County in Spring 2020
Cited by: 22
Author(s): Ralf Wagner, David Peterhoff, Stephanie Beileke, Felix Günther, Melanie Berr, Sebastian Einhauser, Alexander Schütz, Hans Helmut Niller, Philipp Steininger, Antje Knöll, Matthias Tenbusch, Clara Maier, Klaus Korn, Klaus Stark, André Gessner, Ralph Burkhardt, Michael Kabesch, Holger Schedl, Helmut Küchenhoff, Annette Pfahlberg, Iris M. Heid, Olaf Gefeller, Klaus Überla
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2020.631643

Interaction Between the SNARE SYP121 and the Plasma Membrane Aquaporin PIP2;7 Involves Different Protein Domains
Cited by: 6
Author(s): Timothée Laloux, Irwin Matyjaszczyk, Simon Beaudelot, Charles Hachez, François Chaumont
Software Mentions: 1
Published: almost 6 years ago

10.1136/bmj.h4708

Frequency of discrepancies in retracted clinical trial reports versus unretracted reports: blinded case-control study
Cited by: 9
Author(s): Graham D. Cole, Alexandra N. Nowbar, Michael Mielewczik, Matthew Shun-Shin, Dárrel P. Francis
Software Mentions: 1
Published: about 11 years ago

10.3390/antibiotics10050488

The Link between Occurrence of Class I Integron and Acquired Aminoglycoside Resistance in Clinical MRSA Isolates
Cited by: 13
Author(s): Ahmed M. El-Baz, Galal Yahya, Basem Mansour, Mohamed Mohamed Adel El‐Sokkary, Reem Alshaman, Abdullah Alattar, Amira M. El-Ganiny
Software Mentions: 1
Published: over 5 years ago

10.3390/v13061043

Evaluation of Production Lots of a Rapid Point-of-Care Lateral Flow Serological Test Intended for Identification of IgM and IgG against the N-Terminal Part of the Spike Protein (S1) of SARS-CoV-2
Cited by: 3
Author(s): Tove Hoffman, Linda Kolstad, Bengt Rönnberg, Åke Lundkvist
Software Mentions: 1
Published: over 5 years ago

10.3390/v13061110

Fos Facilitates Gallid Alpha-Herpesvirus 1 Infection by Transcriptional Control of Host Metabolic Genes and Viral Immediate Early Gene
Cited by: 7
Author(s): Zhitao Wang, Yangyang Qiao, Zhijie Chen, Yumeng Liang, Lü Cui, Yanhui Zhang, Xuefeng Li, Li Xu, Ping Wei, Shengwang Liu, Hai Li
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0188085

Steps to achieve quantitative measurements of microRNA using two step droplet digital PCR
Cited by: 26
Author(s): Elizabeth Stein, David L. Duewer, Natalia Farkas, Erica L. Romsos, Lili Wang, Kenneth D. Cole
Software Mentions: 1
Published: almost 9 years ago

10.3390/v13040536

Dengue Virus Infection and Associated Risk Factors in Africa: A Systematic Review and Meta-Analysis
Cited by: 23
Author(s): Gaspary O. Mwanyika, Leonard E. G. Mboera, Sima Rugarabamu, Baraka Laurian Ngingo, Calvin Sindato, Julius J. Lutwama, Janusz T. Pawęska, Gerald Misinzo
Software Mentions: 1
Published: over 5 years ago

10.3389/fgene.2021.726211

Genome Size Doubling Arises From the Differential Repetitive DNA Dynamics in the Genus Heloniopsis (Melanthiaceae)
Cited by: 7
Author(s): Jaume Pellicer, P. Fernández, Michael F. Fay, Ester Michálková, Ilia J. Leitch
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-25708-x

Emotional reactivity and perspective-taking in individuals with and without severe depressive symptoms
Cited by: 5
Author(s): Constance Imbault, Victor Kuperman
Software Mentions: 1
Published: over 8 years ago

10.1186/s12861-018-0171-7

Cell cycle accumulation of the proliferating cell nuclear antigen PCN-1 transitions from continuous in the adult germline to intermittent in the early embryo of C. elegans
Cited by: 7
Author(s): Zuzana Kocsisova, Kerry Kornfeld, Tim Schedl
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2017.01690

Management of Fruit Species in Urban Home Gardens of Argentina Atlantic Forest as an Influence for Landscape Domestication
Cited by: 6
Author(s): Violeta Furlan, María Lelia Pochettino, Norma I. Hilgert
Software Mentions: 1
Published: about 9 years ago

10.1186/s12917-020-2273-2

TeamMate: a longitudinal study of New Zealand working farm dogs. I. Methods, population characteristics and health on enrolment
Cited by: 4
Author(s): Katja Elisabeth Isaksen, Lori Linney, Helen Williamson, Nick Cave, Ngaio J. Beausoleil, Norman Espinosa, Naomi Cogger
Software Mentions: 1
Published: over 6 years ago

10.3390/v13010114

Studies on the Efficacy, Potential Cardiotoxicity and Monkey Pharmacokinetics of GLP-26 as a Potent Hepatitis B Virus Capsid Assembly Modulator
Cited by: 13
Author(s): Selwyn J. Hurwitz, Noreen McBrearty, Alla Arzumanyan, Eugene Bichenkov, Sijia Tao, Leda Bassit, Zhe Chen, James J. Kohler, Franck Amblard, Mark A. Feitelson, Raymond F. Schinazi
Software Mentions: 1
Published: almost 6 years ago

10.3389/fnbeh.2020.612313

The PEDtracker: An Automatic Staging Approach for Drosophila melanogaster Larvae
Cited by: 6
Author(s): Isabell Schumann, Tilman Triphan
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12879-019-4093-1

In vitro activities of Eravacycline against 336 isolates collected from 2012 to 2016 from 11 teaching hospitals in China
Cited by: 15
Author(s): Chunjiang Zhao, Xiaojuan Wang, Yawei Zhang, Ruobing Wang, Qi Wang, Henan Li, Hui Wang
Software Mentions: 1
Published: over 7 years ago

10.1186/s12859-021-04324-z

LLAMA: a robust and scalable machine learning pipeline for analysis of large scale 4D microscopy data: analysis of cell ruffles and filopodia
Cited by: 1
Author(s): James G. Lefevre, Yvette W. H. Koh, Adam A. Wall, Nicholas D. Condon, Jennifer L. Stow, Nicholas A. Hamilton
Software Mentions: 1
Published: about 5 years ago

10.3390/antibiotics10060677

Colistin Selection of the Mcr-1 Gene in Broiler Chicken Intestinal Microbiota
Cited by: 1
Author(s): Pedro Miguela-Villoldo, Miguel A. Moreno, Agustín Rebollada‐Merino, Antonio Rodríguez‐Bertos, Marta Hernández, David Rodrı́guez-Làzaro, Alejandro Gallardo, Alberto Quesada, J. Goyache, Lucas Domı́nguez, María Ugarte‐Ruiz
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0129506

Biomedical Data Sharing and Reuse: Attitudes and Practices of Clinical and Scientific Research Staff
Cited by: 67
Author(s): Lisa Federer, Ya-Ling Lu, Douglas Joubert, Judith A. Welsh, Barbara Brandys
Software Mentions: 1
Published: over 11 years ago

10.3390/v12111343

High-Throughput Method for Detection of Arbovirus Infection of Saliva in Mosquitoes Aedes aegypti and Ae. albopictus
Cited by: 4
Author(s): Nildimar Alves Honório, Daniel Cardoso Portela Câmara, Keenan Wiggins, Bradley Eastmond, Barry W. Alto
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2019.00279

Applications of Unmanned Aerial Vehicle Based Imagery in Turfgrass Field Trials
Cited by: 33
Author(s): Jing Zhang, Simerjeet Virk, Wesley Porter, Kevin E. Kenworthy, D. G. Sullivan, Brian M. Schwartz
Software Mentions: 1
Published: over 7 years ago

10.1186/s12879-015-1072-z

Syphilis in the economic center of South China: results from a real-time, web-based surveillance program
Cited by: 8
Author(s): Wangjian Zhang, Zhicheng Du, Shaokai Tang, Pi Guo, Xingdong Ye
Software Mentions: 1
Published: about 11 years ago

10.1038/cddis.2017.14

ID2 promotes survival of glioblastoma cells during metabolic stress by regulating mitochondrial function
Cited by: 22
Author(s): Zhonghua Zhang, Gilbert J. Rahme, Pranam Chatterjee, Matthew C. Havrda, Mark A. Israel
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.05357

Dynamic subcellular localization of a respiratory complex controls bacterial respiration
Cited by: 25
Author(s): François Alberge, Léon Espinosa, Farida Seduk, Léa Sylvi, René Toci, Anne Walburger, Axel Magalon
Software Mentions: 1
Published: over 11 years ago

10.3390/antibiotics10060690

An Assessment of the Impact of Coronavirus Disease (COVID-19) Pandemic on National Antimicrobial Consumption in Jordan
Cited by: 22
Author(s): Sayer Al‐Azzam, Nizar M. Mhaidat, Hayaa Abdallah Banat, Mohammad Alfaour, Dana Samih Ahmad, A. Müller, Adi Al-Nuseirat, Elizabeth A. Lattyak, Barbara R. Conway, Mamoon A. Aldeyab
Software Mentions: 1
Published: over 5 years ago

10.3390/v12090950

Molecular Characterization of Hovenia Dulcis-Associated Virus 1 (HDaV1) and 2 (HDaV2): New Tentative Species within the Order Picornavirales
Cited by: 4
Author(s): Flávia Milene Barros Nery, Fernando Lucas Melo, L. S. Boiteux, S. G. Ribeiro, Renato O. Resende, Anelise F. Orílio, J. G. Batista, M. F. Lima, R. C. Pereira–Carvalho
Software Mentions: 1
Published: about 6 years ago

10.3389/fpls.2019.00527

Uncovering Genomic Regions Associated With 36 Agro-Morphological Traits in Indian Spring Wheat Using GWAS
Cited by: 48
Author(s): Sonia Sheoran, Sarika Jaiswal, Dhiraj Kumar, Nishu Raghav, Ruchika Sharma, Sushma Pawar, Surinder Paul, Mir Asif Iquebal, Akanksha Jaiswar, Pradeep Sharma, Rajender Singh, Chanpreet Singh, Arun Kumar Gupta, Neeraj Kumar, U. B. Angadi, Anil Rai, Gyanendra Singh, Dinesh Kumar, Ruchi Tiwari
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2016.00223

Development and Identification of SSR Markers Associated with Starch Properties and β-Carotene Content in the Storage Root of Sweet Potato (Ipomoea batatas L.)
Cited by: 19
Author(s): Kai Zhang, Zhengdan Wu, Daobin Tang, Changwen Lv, Kai Luo, Yong Zhao, Xun Liu, Huang Yuanxin, Jichun Wang
Software Mentions: 1
Published: over 10 years ago

10.1186/s12859-015-0477-4

BACA: bubble chArt to compare annotations
Cited by: 16
Author(s): Vittorio Fortino, Harri Alenius, Dario Greco
Software Mentions: 1
Published: over 11 years ago

10.3390/v12091042

Divergent Influenza-Like Viruses of Amphibians and Fish Support an Ancient Evolutionary Association
Cited by: 20
Author(s): Rhys Parry, Michelle Wille, Olivia M. H. Turnbull, Jemma L. Geoghegan, Edward C. Holmes
Software Mentions: 1
Published: about 6 years ago

10.1186/s12885-018-5254-0

Programmed cell death ligand 1 (PD-L1, CD274) in cholangiocarcinoma – correlation with clinicopathological data and comparison of antibodies
Cited by: 28
Author(s): Mark Kriegsmann, Stephanie Roessler, Katharina Kriegsmann, Marcus Renner, Rémi Longuespée, Thomas Albrecht, M. Loeffler, Stephan Singer, Arianeb Mehrabi, Monika Vogel, Anita Pathil, Bruno Köhler, Christoph Springfeld, Christian Rupp, Karl Heinz Weiss, Benjamin Goeppert
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.47155

Evolution of neuronal anatomy and circuitry in two highly divergent nematode species
Cited by: 49
Author(s): Ray L. Hong, Metta Riebesell, Daniel J. Bumbarger, Steven J. Cook, Heather R Carstensen, Tahmineh Sarpolaki, Luisa Cochella, Jessica Castrejon, Eduardo Moreno, Bogdan Sieriebriennikov, Oliver Hobert, Ralf J. Sommer
Software Mentions: 1
Published: about 7 years ago

10.3389/fpls.2021.714066

Loss of Function of OsFBX267 and OsGA20ox2 in Rice Promotes Early Maturing and Semi-Dwarfism in γ-Irradiated IWP and Genome-Edited Pusa Basmati-1
Cited by: 2
Author(s): M. T. Andrew‐Peter‐Leon, Ramchander Selvaraj, K. K. Kumar, Mehanathan Muthamilarasan, Jeshima Khan Yasin, M. Arumugam Pillai
Software Mentions: 1
Published: about 5 years ago

10.3389/fgene.2019.00782

Controlled Reduction of Genomic Heterozygosity in an Industrial Yeast Strain Reveals Wide Cryptic Phenotypic Variation
Cited by: 9
Author(s): Nádia Sampaio, Ruth A. Watson, Juan Lucas Argueso
Software Mentions: 1
Published: about 7 years ago

10.3389/fimmu.2018.01011

Monitoring Extracellular Vesicle Cargo Active Uptake by Imaging Flow Cytometry
Cited by: 44
Author(s): Yifat Ofir-Birin, Paula Abou Karam, Ariel Rudik, Tal Giladi, Ziv Porat, Neta Regev‐Rudzki
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2019.00317

Portable X-Ray Fluorescence Spectroscopy for Rapid and Cost-Effective Determination of Elemental Composition of Ground Forage
Cited by: 16
Author(s): John R. White, Louis M. McDonald, Thomas C. Griggs, Thomas J. Basden, Lee Drake
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-27785-4

Spatiotemporal disturbance characteristics determine functional stability and collapse risk of simulated microbial ecosystems
Cited by: 13
Author(s): Sara König, Anja Worrich, Thomas Banitz, Florian Centler, Hauke Harms, Matthias Kästner, Anja Miltner, Lukas Y. Wick, Martin Thullner, Karin Frank
Software Mentions: 1
Published: over 8 years ago

10.1186/s12885-021-07837-1

Novel immune-related genes in the tumor microenvironment with prognostic value in breast cancer
Cited by: 7
Author(s): Wen Tan, Maomao Liu, Liangshan Wang, Yang Guo, Chunhong Wei, Shuqi Zhang, Chengyu Luo, Nan Liu
Software Mentions: 1
Published: over 5 years ago

10.3390/nu11020337

Autism Spectrum Disorder (ASD) with and without Mental Regression is Associated with Changes in the Fecal Microbiota
Cited by: 61
Author(s): Julio Plaza‐Díaz, Antonio Gómez-Fernández, Natalia Chueca, María José de la Torre-Aguilar, Ángel Gil, Juan Luis Pérez‐Navero, Katherine Flores-Rojas, Pilar Martín-Borreguero, Patricio Solís-Urra, Francisco Javier Ruiz‐Ojeda, Féderico García, Mercedes Gil-Campos
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.05864

MorphoGraphX: A platform for quantifying morphogenesis in 4D
Cited by: 352
Author(s): Pierre Barbier de Reuille, Anne-Lise Routier-Kierzkowska, Daniel Kierzkowski, George W. Bassel, Thierry Schüpbach, Gerardo Tauriello, Namrata Bajpai, Soeren Strauss, Alain Weber, Annamária Kiss, Agata Burian, Hugo Hofhuis, Aleksandra Sapala, Marcin Lipowczan, Maria B. Heimlicher, Sarah Robinson, Emmanuelle Bayer, Konrad Basler, Petros Koumoutsakos, Adrienne Roeder, Tinri Aegerter-Wilmsen, Naomi Nakayama, Miltos Tsiantis, Angela Hay, Dorota Kwiatkowska, Ioannis Xénarios, Cris Kuhlemeier, Richard S. Smith
Software Mentions: 1
Published: over 11 years ago

10.3389/fbioe.2020.566984

Identification and Characterization of Circular RNA as a Novel Regulator and Biomarker in Preterm Birth
Cited by: 7
Author(s): Yuxin Ran, Ning Yin, Dongni Huang, Yangyu Zhao, Jing Yang, Hanwen Zhang, Hongbo Qi
Software Mentions: 1
Published: almost 6 years ago

10.3390/v11040332

Experimental Infection of Sand Flies by Massilia Virus and Viral Transmission by Co-Feeding on Sugar Meal
Cited by: 9
Author(s): Magdalena Jancarova, Laurence Bichaud, Jana Hlaváčová, Stéphane Priet, Nazlı Ayhan, Tatiana Spitzová, Petr Volf, Rémi N. Charrel
Software Mentions: 1
Published: over 7 years ago

10.1128/mSystems.01041-20

Genomes of the “ Candidatus Actinomarinales” Order: Highly Streamlined Marine Epipelagic Actinobacteria
Cited by: 16
Author(s): Mario López‐Pérez, Jose M. Haro‐Moreno, Jaime Iranzo, Francisco Rodrı́guez-Valera
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-018-28349-2

The epidemiological characteristics and molecular phylogeny of the dengue virus in Guangdong, China, 2015
Cited by: 11
Author(s): Jiufeng Sun, Huan Zhang, Qiqi Tan, Huiqiong Zhou, Dawei Guan, Xin Zhang, Duan Jinhua, Shumin Cai, Zhiqiang Peng, Jianfeng He, Changwen Ke, Junfen Lin, Tao Liu, De Wu
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2020.00012

The Genetic Architecture for Phenotypic Plasticity of the Rice Grain Ionome
Cited by: 18
Author(s): Yan‐Xi Tan, Jin Zhou, Jiurong Wang, Liang Sun
Software Mentions: 1
Published: over 6 years ago

10.3390/v7020456

In Search of Pathogens: Transcriptome-Based Identification of Viral Sequences from the Pine Processionary Moth (Thaumetopoea pityocampa)
Cited by: 14
Author(s): Agata Jakubowska, Remziye Nalçacıoğlu, Anabel Millán-Leiva, Alejandro Sanz-Carbonell, Hacer Muratoğlu, Salvador Herrero, Zihni Demirbağ
Software Mentions: 1
Published: almost 12 years ago

10.1093/ve/veab069

The ongoing evolution of variants of concern and interest of SARS-CoV-2 in Brazil revealed by convergent indels in the amino (N)-terminal domain of the spike protein
Cited by: 29
Author(s): Paola Cristina Resende, Felipe Gomes Naveca, Roberto D. Lins, Filipe Zimmer Dezordi, Matheus Ferraz, Emerson G. Moreira, Danilo F. Coêlho, Fernando Couto Motta, Ariane Gomes Paixão, Luciana Appolinario, Renata Serrano Lopes, Ana Carolina da Fonseca Mendonça, Alice Sampaio Barreto da Rocha, Valdinete Alves do Nascimento, Victor Costa de Souza, George Silva, Fernanda Nascimento, Lídio Gonçãlves Lima Neto, Fabiano Vieira da Silva, Irina Nastassja Riediger, Maria do Carmo Debur, Anderson Brandão Leite, Tirza Mattos, Cristiano Fernandes da Costa, Felicidade Mota Pereira, Cliomar Alves dos Santos, Darcita Büerger Rovaris, Sandra Bianchini Fernandes, Adriano Abbud, Cláudio Tavares Sacchi, Ricardo Khouri, André Felipe Leal Bernardes, Edson Delatorre, Tiago Gräf, Marilda Mendonça Siqueira, Gonzalo Bello, Gabriel Luz Wallau
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-28116-3

Complex ecological interactions of Staphylococcus aureus in tampons during menstruation
Cited by: 13
Author(s): Isaline Jacquemond, Anaëlle Muggeo, G. Lamblin, Anne Tristan, Yves Gillet, Pierre Adrien Bolze, Michèle Bes, Claude Alexandre Gustave, Jean-Philippe Rasigade, François Golfier, Tristan Ferry, Audrey Dubost, Danis Abrouk, Samuel Barreto, Claire Prigent‐Combaret, Jean Thioulouse, Gérard Lina, Daniel Müller
Software Mentions: 1
Published: over 8 years ago

10.1093/ve/vey005

Private collection: high correlation of sample collection and patient admission date in clinical microbiological testing complicates sharing of phylodynamic metadata
Cited by: 6
Author(s): Ryan C. Shean, Alexander L. Greninger
Software Mentions: 1
Published: almost 9 years ago

10.1093/ve/vex011

Viral coinfection is shaped by host ecology and virus–virus interactions across diverse microbial taxa and environments
Cited by: 59
Author(s): Samuel L. Díaz‐Muñoz
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12885-021-08108-9

Multi gene mutation signatures in colorectal cancer patients: predict for the diagnosis, pathological classification, staging and prognosis
Cited by: 19
Author(s): Yan Zhuang, Hailong Wang, Da Jiang, Ying Liu, Lixia Feng, Caijuan Tian, Mingyu Pu, Xiaowei Wang, Jiangyan Zhang, Y. Hu, Pengfei Liu
Software Mentions: 1
Published: over 5 years ago

10.1186/s12885-021-08171-2

Comparison of breast cancer surrogate subtyping using a closed-system RT-qPCR breast cancer assay and immunohistochemistry on 100 core needle biopsies with matching surgical specimens
Cited by: 7
Author(s): Slavica Janeva, Toshima Z. Parris, Salmir Nasic, Shahin De Lara, Karin Larsson, Riccardo A. Audisio, Roger Olofsson Bagge, Anikó Kovács
Software Mentions: 1
Published: over 5 years ago

10.1186/s12985-021-01655-4

Genomic and functional characterization of five novel Salmonella-targeting bacteriophages
Cited by: 10
Author(s): Marta Kuźmińska-Bajor, Paulina Śliwka, Maciej Ugorski, Paweł Korzeniowski, Aneta Skaradzińska, Maciej Kuczkowski, Magdalena Narajaczyk, Alina Wieliczko, Rafał Kolenda
Software Mentions: 1
Published: about 5 years ago

10.3389/fgene.2021.658241

Comprehensive Analysis of the Expression Characteristics of the Enhancer of the Zeste Homolog 2 Gene in Pan-Cancer
Cited by: 3
Author(s): Yuanyuan Kang, Ying Zhang, Yan Sun
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2334-14-460

The frequency of tetracycline resistance genes co-detected with respiratory pathogens: a database mining study uncovering descriptive trends throughout the United States
Cited by: 1
Author(s): Matthew Huff, David Weisman, John S. Adams, Song Li, Jessica Green, Leslie Malone, Scott Clemmons
Software Mentions: 1
Published: about 12 years ago

10.3389/fpls.2018.01166

Genetic Diversity and Population Structure of the USDA Sweetpotato (Ipomoea batatas) Germplasm Collections Using GBSpoly
Cited by: 50
Author(s): Phillip A. Wadl, Bode A. Olukolu, Sandra Branham, Robert L. Jarret, G. Craig Yencho, D. Michael Jackson
Software Mentions: 1
Published: about 8 years ago

10.1038/s41419-021-03448-7

CHBP induces stronger immunosuppressive CD127+ M-MDSC via erythropoietin receptor
Cited by: 6
Author(s): Jiawei Li, Guo-Wei Tu, Weitao Zhang, Yi Zhang, Xuepeng Zhang, Yue Qiu, Jiyan Wang, Tianle Sun, Tongyu Zhu, Cheng Yang, Ruiming Rong
Software Mentions: 1
Published: over 5 years ago

10.1093/annweh/wxaa080

Evaluation of Methods for Sampling of Staphylococcus aureus and Other Staphylococcus Species from Indoor Surfaces
Cited by: 8
Author(s): Anne Mette Madsen, Hoang U.T. Phan, Mathias Laursen, John Kerr White, Katrine Uhrbrand
Software Mentions: 1
Published: about 6 years ago

10.3389/fpls.2018.00270

AtHMA4 Drives Natural Variation in Leaf Zn Concentration of Arabidopsis thaliana
Cited by: 18
Author(s): Zi-Ru Chen, Lu Kong, Yi-Qun Gao, Yaling Wang, David E. Salt, Dai‐Yin Chao
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2021.682453

Mutations of the Genomes Uncoupled 4 Gene Cause ROS Accumulation and Repress Expression of Peroxidase Genes in Rice
Cited by: 9
Author(s): Ruiqing Li, Meng Jiang, Jianzhong Huang, Ian Max Møller, Qingyao Shu
Software Mentions: 1
Published: over 5 years ago

10.1186/s12879-018-3248-9

Prevalence of human anelloviruses in Romanian healthy subjects and patients with common pathologies
Cited by: 22
Author(s): Sonia Spandole-Dinu, Dănuţ Cimponeriu, Anne-Marie Crăciun, I Radu, Silvia Nica, Mihai Toma, Oana Andrada Alexiu, Corneliu Sorin Iorga, Lavinia-Mariana Berca, Remus Nica
Software Mentions: 1
Published: over 8 years ago

10.1245/s10434-018-6396-7

A Population-based Study on Lymph Node Retrieval in Patients with Esophageal Cancer: Results from the Dutch Upper Gastrointestinal Cancer Audit
Cited by: 38
Author(s): Leonie R. van der Werf, Johan L. Dikken, Mark I. van Berge Henegouwen, Valery Lemmens, G. Nieuwenhuijzen, Bas P. L. Wijnhoven
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-29559-4

Methodological bias associated with soluble protein recovery from soil
Cited by: 14
Author(s): Lucy M. Greenfield, Paul W. Hill, Eric Paterson, Elizabeth M. Baggs, Davey L. Jones
Software Mentions: 1
Published: over 8 years ago

10.1186/s12985-018-1095-3

Virome analyses of Hevea brasiliensis using small RNA deep sequencing and PCR techniques reveal the presence of a potential new virus
Cited by: 9
Author(s): Paula Luize Camargos Fonseca, Fernanda Badotti, Tatiana Flávia Pinheiro de Oliveira, Antônio Augusto Fonseca, Aline B. M. Vaz, Luiz Marcelo Ribeiro Tomé, Jônatas Santos Abrahão, João Trindade Marques, Giliane S. Trindade, Priscila Chaverri, Eric Roberto Guimarães Rocha Aguiar, Aristóteles Goés-Neto
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2020.607869

A Comparative Study for Assessing the Drought-Tolerance of Chickpea Under Varying Natural Growth Environments
Cited by: 21
Author(s): Anjuman Arif, Najma Parveen, Muhammad Qandeel Waheed, Rana Muhammad Atif, Irem Waqar, Tariq Shah
Software Mentions: 1
Published: over 5 years ago

10.1186/1743-422X-10-62

Mutation Reporter Tool: An online tool to interrogate loci of interest, with its utility demonstrated using hepatitis B virus
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Author(s): Trevor Graham Bell, Anna Kramvis
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2172-12-11

Ketamine inhibits tumor necrosis factor secretion by RAW264.7 murine macrophages stimulated with antibiotic-exposed strains of community-associated, methicillin-resistant Staphylococcus aureus
Cited by: 17
Author(s): Thomas Spentzas, Rebekah K H Shapley, Carlos Acuna Aguirre, Elizabeth Meals, Linda F. Lazar, Mark Rayburn, Brett S. Walker, B. Keith English
Software Mentions: 1
Published: almost 16 years ago

10.3389/fpls.2021.680545

Combinations of Blue and Red LEDs Increase the Morphophysiological Performance and Furanocoumarin Production of Brosimum gaudichaudii Trécul in vitro
Cited by: 3
Author(s): Érica Letícia Gomes Costa, Fernanda dos Santos Farnese, Thales Caetano de Oliveira, Márcio Rosa, Aline Sueli de Lima Rodrigues, Erika Crispim Resende, Ana Helena Januário, Fabiano Guimarães Silva
Software Mentions: 1
Published: over 5 years ago

10.1007/s00428-021-03100-x

CD73 expression in normal, hyperplastic, and neoplastic thyroid: a systematic evaluation revealing CD73 overexpression as a feature of papillary carcinomas
Cited by: 3
Author(s): Inês Monteiro, Edoardo Missiaglia, Amedeo Sciarra, João Vasco Santos, Justine Bouilly, Pedro Romero, Christine Sempoux, Laurence de Leval
Software Mentions: 1
Published: over 5 years ago

10.18632/aging.103465

Systems biology approach to exploring the effect of cyclic stretching on cardiac cell physiology
Cited by: 0
Author(s): Chien Cheng Chen, Tai‐Chee Wong, Tzu Yun Chin, Wen Hsien Lee, Chan Yen Kuo, Yi Chiung Hsu
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-29825-5

Skeletal muscle cutoff values for sarcopenia diagnosis using T10 to L5 measurements in a healthy US population
Cited by: 259
Author(s): Brian A. Derstine, Sven A. Holcombe, Brian E. Ross, Nicholas Wang, Grace L. Su, Stewart C. Wang
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2017.01272

A Soil-Plate Based Pipeline for Assessing Cereal Root Growth in Response to Polyethylene Glycol (PEG)-Induced Water Deficit Stress
Cited by: 12
Author(s): Sven K. Nelson, Melvin J. Oliver
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0232965

The double-edged sword role of fibroblasts in the interaction with cancer cells; an agent-based modeling approach
Cited by: 8
Author(s): Zarifeh Heidary, Jafar Ghaisari, Shiva Moein, Shaghayegh Haghjooy Javanmard
Software Mentions: 1
Published: over 6 years ago

10.1590/s0102-865020200050000008

Differences in lipidomics may be potential biomarkers for early diagnosis of pancreatic cancer
Cited by: 8
Author(s): Dehua Zhou, Di Mu, Ming Cheng, Yuting Dou, Xianwei Zhang, Zhensheng Feng, Guangyu Qiu, Hua Yu, Yang Chen, Hong Xu, Jian Sun, Ling Zhou
Software Mentions: 1
Published: almost 7 years ago

10.18632/aging.103509

Circadian clock is associated with tumor microenvironment in kidney renal clear cell carcinoma
Cited by: 20
Author(s): Liangcheng Zhou, Zundu Luo, Zuwei Li, Qinying Huang
Software Mentions: 1
Published: over 6 years ago

10.3390/nu13041369

Global Trends (1961–2017) in Human Dietary Potassium Supplies
Cited by: 13
Author(s): Diriba B. Kumssa, Edward J. M. Joy, Martin R. Broadley
Software Mentions: 1
Published: over 5 years ago

10.1186/s12885-015-1909-2

Inhibiting inducible miR-223 further reduces viable cells in human cancer cell lines MCF-7 and PC3 treated by celastrol
Cited by: 25
Author(s): Lu Cao, Xue Zhang, Fanfan Cao, Ying Wang, Yu-fan Shen, Chen Yang, Georges Uzan, Bin Peng, Denghai Zhang
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12877-020-01850-y

Cross-sectoral inter-rater reliability of the clinical frailty scale – a Danish translation and validation study
Cited by: 23
Author(s): Søren Kabell Nissen, Anders Vestergaard Fournaise, Jørgen Lauridsen, Jesper Ryg, Christian H. Nickel, Claire Gudex, Mikkel Brabrand, Karen Andersen‐Ranberg
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-018-30500-y

The Gpr1-regulated Sur7 family protein Sfp2 is required for hyphal growth and cell wall stability in the mycoparasite Trichoderma atroviride
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Author(s): Lea Atanasova, Sabine Gruber, Alexander Lichius, Theresa Radebner, Leoni Abendstein, Martin Münsterkötter, Nancy Stralis‐Pavese, Paweł P. Łabaj, David P. Kreil, Susanne Zeilinger
Software Mentions: 1
Published: about 8 years ago

10.1128/mSystems.01292-20

Mycobacteria Tolerate Carbon Monoxide by Remodeling Their Respiratory Chain
Cited by: 5
Author(s): Katherine Bayly, Paul R. F. Cordero, Ashleigh Kropp, Cheng Huang, Ralf B. Schittenhelm, Rhys Grinter, Chris Greening
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-017-4283-4

Phylogenetic and recombination analysis of the herpesvirus genus varicellovirus
Cited by: 26
Author(s): Aaron W. Kolb, Andrew C. Lewin, Ralph Trane, Gillian J. McLellan, Curtis R. Brandt
Software Mentions: 1
Published: almost 9 years ago

10.3389/fpls.2021.641890

Presence of the Weakly Pathogenic Fusarium poae in the Fusarium Head Blight Disease Complex Hampers Biocontrol and Chemical Control of the Virulent Fusarium graminearum Pathogen
Cited by: 16
Author(s): Junjun Tan, Noémie De Zutter, Sarah De Saeger, Marthe De Boevre, Trang Minh Tran, Théo van der Lee, C. Waalwijk, Anne Willems, Peter Vandamme, Maarten Ameye, Kris Audenaert
Software Mentions: 1
Published: over 5 years ago

10.1186/s13567-014-0090-y

Phylodynamic reconstruction of O CATHAY topotype foot-and-mouth disease virus epidemics in the Philippines
Cited by: 20
Author(s): Antonello Di Nardo, Nick J. Knowles, Jemma Wadsworth, Daniel T. Haydon, Donald P. King
Software Mentions: 1
Published: about 12 years ago

10.1038/s41598-019-55800-9

Not all birds have a single dominantly expressed MHC-I gene: Transcription suggests that siskins have many highly expressed MHC-I genes
Cited by: 10
Author(s): Anna Drews, Helena Westerdahl
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12885-020-07523-8

microRNA-451a promoter methylation regulated by DNMT3B expedites bladder cancer development via the EPHA2/PI3K/AKT axis
Cited by: 10
Author(s): Beibei Liu, Wei Sun, Wuyue Gao, Liqiang Li, Zhenxue Cao, Xiaohuai Yang, Jianmin Liu, Yuanyuan Guo
Software Mentions: 1
Published: about 6 years ago

10.1186/s12864-015-2155-3

High transcript abundance, RNA editing, and small RNAs in intergenic regions within the massive mitochondrial genome of the angiosperm Silene noctiflora
Cited by: 36
Author(s): Zhiqiang Wu, James D. Stone, Helena Štorchová, Daniel B. Sloan
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0215665

Epidemiological and clinical features of Kawasaki disease in Spain over 5 years and risk factors for aneurysm development. (2011-2016): KAWA-RACE study group
Cited by: 38
Author(s): Elisa Fernández-Cooke, Ana Barrios Tascón, Judith Sánchez-Manubens, Jordi Antón, Carlos Grasa, Javier Aracil Santos, Enrique Villalobos Pinto, Daniel Clemente Garulo, Beatriz Mercader Rodríguez, Matilde Bustillo-Alonso, Esmeralda Núñez-Cuadros, María Luisa Navarro Gómez, Sara Domínguez‐Rodríguez, Cristina Calvo
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.47460

A distinct cardiopharyngeal mesoderm genetic hierarchy establishes antero-posterior patterning of esophagus striated muscle
Cited by: 17
Author(s): Glenda Comai, Églantine Heude, Sébastien Mella, Sylvain Paisant, Francesca Pala, Mirialys Gallardo, Francina Langa, Gabrielle Kardon, Swetha Gopalakrishnan, Shahragim Tajbakhsh
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-56476-x

High MAST2 mRNA expression and its role in diagnosis and prognosis of liver cancer
Cited by: 9
Author(s): Yan Jiao, Yanqing Li, Peiqiang Jiang, Zhuo Fu, Yahui Liu
Software Mentions: 1
Published: almost 7 years ago

10.3389/fpls.2018.01399

The Phytogeographic History of Common Walnut in China
Cited by: 32
Author(s): Xiaojia Feng, Huijuan Zhou, Saman Zulfiqar, Xiang Luo, Yiheng Hu, Li Feng, Maria Emilia Malvolti, Keith Woeste, Peng Zhao
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0069202

Genome-Wide Association Mapping for Identification of Quantitative Trait Loci for Rectal Temperature during Heat Stress in Holstein Cattle
Cited by: 86
Author(s): Serdal Dikmen, J.B. Cole, D.J. Null, Peter J. Hansen
Software Mentions: 1
Published: over 13 years ago

10.3389/fpls.2017.00372

In silico MCMV Silencing Concludes Potential Host-Derived miRNAs in Maize
Cited by: 18
Author(s): Muhammad Shahzad Iqbal, Basit Jabbar, Muhammad Nauman Sharif, Qurban Ali, Tayyab Husnain, Idrees Ahmad Nasir
Software Mentions: 1
Published: over 9 years ago

10.1186/s12896-019-0558-y

Standardized mounting method of (zebrafish) embryos using a 3D-printed stamp for high-content, semi-automated confocal imaging
Cited by: 9
Author(s): David Simon Kleinhans, Virginie Lecaudey
Software Mentions: 1
Published: about 7 years ago

10.3389/fpls.2021.649204

Growing in Mixed Stands Increased Leaf Photosynthesis and Physiological Stress Resistance in Moso Bamboo and Mature Chinese Fir Plantations
Cited by: 7
Author(s): Chunju Peng, Song YanDong, Chong Li, Tingting Mei, Zhen Wu, Yongjun Shi, Yongqiang Zhou, Guomo Zhou
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-021-07779-9

Amino acid transporter (AAT) gene family in foxtail millet (Setaria italica L.): widespread family expansion, functional differentiation, roles in quality formation and response to abiotic stresses
Cited by: 8
Author(s): Yang Yang, Yongmao Chai, Jiayi Liu, Jie Zheng, Zhangchen Zhao, Aduragbemi Amo, Chunge Cui, Qiumei Lu, Liang Chen, Yin‐Gang Hu
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2019.01265

Phytochemical and Ecological Analysis of Two Varieties of Hemp (Cannabis sativa L.) Grown in a Mountain Environment of Italian Alps
Cited by: 84
Author(s): Radmila Pavlović, Sara Panseri, Luca Giupponi, Valeria Leoni, Cinzia Citti, Chiara Cattaneo, Maria Cavaletto, Annamaria Giorgi
Software Mentions: 1
Published: about 7 years ago

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