cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3390/cells10081910

Two Sides to Every Question: Attempts to Activate Chicken Innate Immunity in 2D and 3D Hepatic Cell Cultures
Cited by: 5
Author(s): Csilla Sebők, Patrik Tráj, Júlia Vörösházi, Máté Mackei, Márton Papp, P. Gálfi, Zsuzsanna Neogrády, Gábor Mátis
Software Mentions: 1
Published: over 3 years ago

10.1002/jia2.25044

Inequality in outcomes for adolescents living with perinatally acquired <scp>HIV</scp> in sub‐Saharan Africa: a Collaborative Initiative for Paediatric <scp>HIV</scp> Education and Research (<scp>CIPHER</scp>) Cohort Collaboration analysis
Cited by: 17
Author(s):
Software Mentions: 1
Published: almost 7 years ago

10.3390/cells9051284

In Vitro-Generated Hypertrophic-Like Adipocytes Displaying PPARG Isoforms Unbalance Recapitulate Adipocyte Dysfunctions In Vivo
Cited by: 14
Author(s): Marianna Aprile, Simona Cataldi, Caterina Perfetto, Maria Rosaria Ambrosio, Paola Italiani, Rosarita Taté, Matthias Blüher, Alfredo Ciccodicola, Valerio Costa
Software Mentions: 1
Published: over 4 years ago

10.3390/cells8091022

Discordant Effects of Putative Lysine Acetyltransferase Inhibitors in Biochemical and Living Systems
Cited by: 3
Author(s): Ryan A. Henry, Yin-Ming Kuo, Zarek S. Siegel, Timothy Yen, Jennifer Rhodes, Erika A. Taylor, Andrew J. Andrews
Software Mentions: 1
Published: over 5 years ago

10.3390/cells9020499

High Levels of Class I Major Histocompatibility Complex mRNA Are Present in Epstein–Barr Virus-Associated Gastric Adenocarcinomas
Cited by: 16
Author(s): Farhad Ghasemi, Steven F. Gameiro, Tanner M. Tessier, Allison H. Maciver, Joe S. Mymryk
Software Mentions: 1
Published: almost 5 years ago

10.3390/cells8060556

gga-miRNA-18b-3p Inhibits Intramuscular Adipocytes Differentiation in Chicken by Targeting the ACOT13 Gene
Cited by: 29
Author(s): Guirong Sun, Fang Li, Xiangfei Ma, Junwei Sun, Ruirui Jiang, Yadong Tian, Ruili Han, Guoxi Li, Yanbin Wang, Zhuanjian Li, Xin Kang, Wenting Li
Software Mentions: 1
Published: over 5 years ago

10.3390/cells9040922

Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline
Cited by: 5
Author(s): Pavel A Komarov, Olesya Sokolova, Natalia Akulenko, Emilie Brasset, Silke Jensen, Alla Kalmykova
Software Mentions: 1
Published: over 4 years ago

10.1155/2020/9602942

Temporal Trends in X-Ray Exposure during Coronary Angiography and Percutaneous Coronary Intervention
Cited by: 6
Author(s): Cedric Davidsen, Kirsten Bolstad, Ellisif Nygaard, Kjell Vikenes, Svein Rotevatn, Vegard Tuseth
Software Mentions: 1
Published: over 4 years ago

10.1194/jlr.M092486

Comparative quantitative systems pharmacology modeling of anti-PCSK9 therapeutic modalities in hypercholesterolemia
Cited by: 17
Author(s): В. В. Соколов, Gabriel Helmlinger, Carin Nilsson, Kirill Zhudenkov, Stanko Skrtic, Bengt Hamrén, Kirill Peskov, Eva Hurt-Camejo, Rasmus Jansson‐Löfmark
Software Mentions: 1
Published: over 5 years ago

10.1186/s12936-018-2475-2

An expanded global inventory of allelic variation in the most extremely polymorphic region of Plasmodium falciparum merozoite surface protein 1 provided by short read sequence data
Cited by: 6
Author(s): Harvey Aspeling-Jones, David J. Conway
Software Mentions: 1
Published: about 6 years ago

10.1007/s10911-020-09461-4

Protocol: Adeno-Associated Virus-Mediated Gene Transfer in Ex Vivo Cultured Embryonic Mammary Gland
Cited by: 3
Author(s): Qiang Lan, Marja L. Mikkola
Software Mentions: 1
Published: about 4 years ago

10.1155/2017/5724046

Differential Regulation of Cardiac Function and Intracardiac Cytokines by Rapamycin in Healthy and Diabetic Rats
Cited by: 21
Author(s): Christian Lück, Vincent G. DeMarco, Abuzar Mahmood, Madhavi P. Gavini, Lakshmi Pulakat
Software Mentions: 1
Published: almost 8 years ago

10.1128/JVI.00571-18

Real-Time Visualization and Quantification of Human Cytomegalovirus Replication in Living Cells Using the ANCHOR DNA Labeling Technology
Cited by: 43
Author(s): Bernard Mariamé, Sandrine Kappler-Gratias, Martin Kappler, Stéphanie Balor, Franck Gallardo, Kerstin Bystricky
Software Mentions: 1
Published: about 6 years ago

10.5195/jmla.2018.306

Defining data librarianship: a survey of competencies, skills, and training
Cited by: 42
Author(s): Lisa Federer
Software Mentions: 1
Published: over 6 years ago

10.1099/jmm.0.000792

Accuracy of a commercial multiplex PCR for the diagnosis of bacterial vaginosis
Cited by: 22
Author(s): Charlotte van der Veer, Robin van Houdt, Alje P. van Dam, Henry De Vries, Sylvia M. Bruisten
Software Mentions: 1
Published: over 6 years ago

10.3390/cells10071736

In Silico Analysis of the Longevity and Timeline of Individual Germinal Center Reactions in a Primary Immune Response
Cited by: 1
Author(s): Theinmozhi Arulraj, Sebastian C. Binder, Michael Meyer–Hermann
Software Mentions: 1
Published: over 3 years ago

10.1186/s12936-018-2511-2

Dramatic decreases of malaria transmission intensities in Ifakara, south-eastern Tanzania since early 2000s
Cited by: 37
Author(s): Marceline Finda, Alex J. Limwagu, Halfan S. Ngowo, Nancy S. Matowo, Johnson Kyeba Swai, Emmanuel W. Kaindoa, Fredros O. Okumu
Software Mentions: 1
Published: about 6 years ago

10.1016/j.jmb.2017.03.014

Prediction and Reduction of the Aggregation of Monoclonal Antibodies
Cited by: 110
Author(s): Rob van der Kant, Anne R. Karow-Zwick, Joost Van Durme, Michaela Blech, Rodrigo Gallardo, Daniel Seeliger, Kerstin Aßfalg, Pieter Baatsen, Griet Compernolle, Ann Gils, Joey Studts, Patrick Schulz, Patrick Garidel, Joost Schymkowitz, Frédéric Rousseau
Software Mentions: 1
Published: over 7 years ago

10.3390/cells9010095

Angiogenic Activity of Cytochalasin B-Induced Membrane Vesicles of Human Mesenchymal Stem Cells
Cited by: 25
Author(s): Marina O. Gomzikova, Margarita Zhuravleva, V. V. Vorobev, И. И. Салафутдинов, Alexander Laikov, Sevindzh K. Kletukhina, Е. В. Мартынова, Leysan G. Tazetdinova, Atara Ntekim, Svetlana Khaiboullina, Albert A. Rizvanov
Software Mentions: 1
Published: almost 5 years ago

10.3390/cells9102199

HbF Levels in Sickle Cell Disease Are Associated with Proportion of Circulating Hematopoietic Stem and Progenitor Cells and CC-Chemokines
Cited by: 0
Author(s): Caterina P. Minniti, Seda S. Tolu, Kai Wang, Zi Yan, Karl Robert, Shouping Zhang, Andrew Crouch, Joan Uehlinger, Deepa Manwani, Eric E. Bouhassira
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms20194784

Gene Expression of Haloferax volcanii on Intermediate and Abundant Sources of Fixed Nitrogen
Cited by: 4
Author(s): Sungmin Hwang, Nikita E. Chavarria, Rylee K Hackley, Amy K. Schmid, Julie A. Maupin-Furlow
Software Mentions: 1
Published: about 5 years ago

10.3390/cells10030664

Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in Ostreococcus tauri
Cited by: 3
Author(s): Julie Thomy, Frédéric Sanchez, Marta Gut, Fernando Cruz, Tyler Alioto, Gwenaël Piganeau, Nigel Grimsley, Sheree Yau
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms20215513

ZmRAD51C Is Essential for Double-Strand Break Repair and Homologous Recombination in Maize Meiosis
Cited by: 14
Author(s): Juli Jing, Ting Zhang, Yazhong Wang, Zhenhai Cui, Yan He
Software Mentions: 1
Published: about 5 years ago

10.3390/cells9102159

Characterization of Hematopoiesis in Sickle Cell Disease by Prospective Isolation of Stem and Progenitor Cells
Cited by: 11
Author(s): Seda S. Tolu, Kai Wang, Zi Yan, Shouping Zhang, Karl Roberts, Andrew Crouch, Gracy Sebastian, Mark Chaitowitz, Eric D. Fornari, Evan M. Schwechter, Joan Uehlinger, Deepa Manwani, Caterina P. Minniti, Eric E. Bouhassira
Software Mentions: 1
Published: about 4 years ago

10.3390/cells10082081

Ewing Sarcoma-Derived Extracellular Vesicles Impair Dendritic Cell Maturation and Function
Cited by: 13
Author(s): Hendrik Gassmann, Kira Schneider, Valentina Evdokimova, Peter Ruzanov, Sebastian Johannes Schober, Busheng Xue, Kristina von Heyking, Melanie Thiede, G. Richter, Michael W. Pfaffl, Elfriede Noeßner, Lincoln Stein, Poul H. Sorensen, Stefan Burdach, Uwe Thiel
Software Mentions: 1
Published: over 3 years ago

10.1016/j.celrep.2017.09.092

Fumarate Hydratase Loss Causes Combined Respiratory Chain Defects
Cited by: 59
Author(s): Petros A. Tyrakis, Marie E. Yurkovich, Marco Sciacovelli, Evangelia K. Papachristou, Hannah R. Bridges, Edoardo Gaude, A. Schreiner, Clive S. D’Santos, Judy Hirst, Juan R. Hernández-Fernaud, Roger Springett, John R. Griffiths, Christian Frezza
Software Mentions: 1
Published: about 7 years ago

10.1186/s12936-020-03395-2

Is Anopheles gambiae attraction to floral and human skin-based odours and their combination modulated by previous blood meal experience?
Cited by: 2
Author(s): ELISON ELIEZA KEMIBALA, Agenor Mafra‐Neto, Jesse Saroli, Rodrigo Silva, Anitha Philbert, Kija Ng’habi, Woodbridge A. Foster, Teun Dekker, Leonard E. G. Mboera
Software Mentions: 1
Published: over 4 years ago

10.1111/cpr.12724

Rbm14 maintains the integrity of genomic DNA during early mouse embryogenesis via mediating alternative splicing
Cited by: 7
Author(s): Jing Li, Chenxin Wang, Guihai Feng, Linlin Zhang, Guilai Chen, Hao Sun, Jiaqiang Wang, Ying Zhang, Qi Zhou, Wei Li
Software Mentions: 1
Published: almost 5 years ago

10.1007/s00018-020-03597-6

The functional characteristics of optogenetic gene therapy for vision restoration
Cited by: 8
Author(s): Moritz Lindner, Michael James Gilhooley, Stuart N. Peirson, Steven Hughes, Mark W. Hankins
Software Mentions: 1
Published: over 4 years ago

10.1186/s11658-021-00261-0

β-elemene alleviates airway stenosis via the ILK/Akt pathway modulated by MIR143HG sponging miR-1275
Cited by: 6
Author(s): Guoying Zhang, Cheng Xue, Yiming Zeng
Software Mentions: 1
Published: over 3 years ago

10.1016/j.cmet.2017.09.003

Citrobacter rodentium Subverts ATP Flux and Cholesterol Homeostasis in Intestinal Epithelial Cells In Vivo
Cited by: 59
Author(s): Cédric N. Berger, Valérie F. Crepin, Theodoros I. Roumeliotis, James C. Wright, Danielle Carson, Meirav Pevsner‐Fischer, R. Christopher D. Furniss, Gordon Dougan, Mally Dori-Bachash, Lu Yu, Abigail Clements, James W. Collins, Eran Elinav, Gérald Larrouy-Maumus, Jyoti S. Choudhary, Gad Frankel
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms21020553

Molecular Profile of Phage Infection: A Novel Approach for the Characterization of Erwinia Phages through qPCR
Cited by: 8
Author(s): Michael Parcey, Steven Gayder, Alan J. Castle, A. M. Svircev
Software Mentions: 1
Published: almost 5 years ago

10.1155/2018/6362716

Distinct Nasopharyngeal and Oropharyngeal Microbiota of Children with Influenza A Virus Compared with Healthy Children
Cited by: 37
Author(s): Wen Zhou, Guoli Xie, Qian Zhou, Chuangzhao Qiu, Jing Li, Qian-Nan Hu, Wenkui Dai, Dongfang Li, Yuejie Zheng, Feiqiu Wen
Software Mentions: 1
Published: about 6 years ago

10.1186/s40364-021-00310-y

Epidemiological trends of women’s cancers from 1990 to 2019 at the global, regional, and national levels: a population-based study
Cited by: 49
Author(s): Ming Yi, Tianye Li, Mengke Niu, Suxia Luo, Qian Chu, Zeyu Wu
Software Mentions: 1
Published: over 3 years ago

10.1186/s40364-020-00236-x

Assessment of serum macrophage migration inhibitory factor (MIF), adiponectin, and other adipokines as potential markers of proteinuria and renal dysfunction in lupus nephritis: a cross-sectional study
Cited by: 9
Author(s): Jorge I. Gámez-Nava, Valeria Díaz-Rizo, Edsaúl Emilio Pérez-Guerrero, José Francisco Muñóz-Valle, Ana Miriam Saldaña-Cruz, Nicte Selene Fajardo-Robledo, Heriberto Jacobo-Cuevas, César Arturo Nava-Valdivia, Miriam Fabiola Alcaraz-López, Xóchitl Trujillo, Miguel Huerta, Ernesto Germán Cardona-Muñóz, Laura González-López
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0155046

A European Mitochondrial Haplotype Identified in Ancient Phoenician Remains from Carthage, North Africa
Cited by: 23
Author(s): Elizabeth Matisoo-Smith, Anna L. Gosling, James Boocock, Olga Kardailsky, Yara Kurumilian, Sihem Roudesli‐Chebbi, Leila Badre, Jean-Paul Morel, Leïla Ladjimi Sebaï, Pierre Zalloua
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms21051550

In Silico Insights into Protein–Protein Interaction Disruptive Mutations in the PCSK9-LDLR Complex
Cited by: 13
Author(s): William R. Martin, Felice C. Lightstone, Feixiong Cheng
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms21051580

Disparity between Inter-Patient Molecular Heterogeneity and Repertoires of Target Drugs Used for Different Types of Cancer in Clinical Oncology
Cited by: 16
Author(s): Marianna Zolotovskaia, Maxim Sorokin, Ivan Petrov, Elena Poddubskaya, Alexey Moiseev, Marina Sekacheva, Nicolas Borisov, Victor Tkachev, Andrew Garazha, А. Д. Каприн, Peter Shegay, Alf Giese, Ella Kim, S. A. Rumyantsev, Anton Buzdin
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0227199

Transgenic overexpression of endogenous FLOWERING LOCUS T-like gene MeFT1 produces early flowering in cassava
Cited by: 24
Author(s): John Odipio, Getu Beyene, Raj Deepika Chauhan, Titus Alicai, Rebecca Bart, Dmitri A. Nusinow
Software Mentions: 1
Published: almost 5 years ago

10.3390/biology10090832

The Regulatory Mechanism of Feeding a Diet High in Rice Grain on the Growth and microRNA Expression Profiles of the Spleen, Taking Goats as an Artiodactyl Model
Cited by: 2
Author(s): Qiongxian Yan, Kaijun Wang, Xuefeng Han, Zhiliang Tan
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0174534

The microRNA repertoire of Tibetan naked carp Gymnocypris przewalskii: A case study in Schizothoracinae fish on the Tibetan Plateau
Cited by: 15
Author(s): Chao Tong, Fei Tian, Cunfang Zhang, Kai Zhao
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0146104

Statistical Evaluation of HTS Assays for Enzymatic Hydrolysis of β-Keto Esters
Cited by: 11
Author(s): O. Buß, Sven Jäger, Sarah‐Marie Dold, Sarah C. Zimmermann, Kay Hamacher, Katja Schmitz, Jens Rudat
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0256342

Plant strategies for maximizing growth during water stress and subsequent recovery in Solanum melongena L. (eggplant)
Cited by: 13
Author(s): E. F. Delfin, Sarah Tepler Drobnitch, Louise H. Comas
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms21093088

Genome-Wide Identification and Characterization of UTR-Introns of Citrus sinensis
Cited by: 4
Author(s): Xiaobao Shi, Junwei Wu, Raphael Anue Mensah, Na Tian, Jiapeng Liu, Fan Liu, Jialan Chen, Jing-Ru Che, Yifeng Guo, Binghua Wu, Guoqiang Zhong, Chunzhen Cheng
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0182730

Quantifying immediate and delayed effects of anthelmintic exposure on ecosystem functioning supported by a common dung beetle species
Cited by: 17
Author(s): Paul Manning, Sarah A. Beynon, Owen T. Lewis
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0170658

Using spatio-temporal surveillance data to test the infectious environment of children before type 1 diabetes diagnosis
Cited by: 6
Author(s): Pierre Bougnères, Sophie Le Fur, Sophie Valtat, Yoichiro Kamatani, Mark Lathrop, Alain‐Jacques Valleron
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0222610

Cardiac resynchronization therapy-heart failure (CRT-HF) clinic: A novel model of care
Cited by: 18
Author(s): Eiran Z. Gorodeski, Christina Magnelli-Reyes, Laurie Ann Moennich, Adam Grimaldi, John Rickard
Software Mentions: 1
Published: about 5 years ago

10.3390/biology10080819

Artificial Plantation Responses to Periodic Submergence in Massive Dam and Reservoir Riparian Zones: Changes in Soil Properties and Bacterial Community Characteristics
Cited by: 19
Author(s): Jiajia Li, Lijuan Li, Muhammad Arif, Dongdong Ding, Xin Hu, Jie Zheng, Zuoqiang Yuan, Changxiao Li
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0176541

Environmental DNA method for estimating salamander distribution in headwater streams, and a comparison of water sampling methods
Cited by: 46
Author(s): Izumi Katano, Ken Harada, Rio Souma, Toshifumi Minamoto
Software Mentions: 1
Published: over 7 years ago

10.3390/biology10090892

Qualitative and Quantitative Resistance against Early Blight Introgressed in Potato
Cited by: 11
Author(s): Pieter J. Wolters, Doret Wouters, Emil J. Kromhout, D. J. Huigen, R.G.F. Visser, Vivianne G. A. A. Vleeshouwers
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0206512

Immune diversity sheds light on missing variation in worldwide genetic diversity panels
Cited by: 53
Author(s): Laurent Abi-Rached, Philippe Gouret, Jung-Hua Yeh, Julie Di Cristofaro, Pierre Pontarotti, Christophe Picard, Julien Paganini
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0253440

Evaluating coverage bias in next-generation sequencing of Escherichia coli
Cited by: 6
Author(s): Samantha Gunasekera, Sam Abraham, Marc Stegger, Stanley Pang, Penghao Wang, Shafi Sahibzada, Mark O’Dea
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0241373

Variations in the Circle of Willis in a large population sample using 3D TOF angiography: The Tromsø Study
Cited by: 28
Author(s): Lars B. Hindenes, Asta Håberg, Liv Hege Johnsen, Ellisiv B. Mathiesen, David Robben, Torgil Vangberg
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0149813

Effects of Invasive-Plant Management on Nitrogen-Removal Services in Freshwater Tidal Marshes
Cited by: 21
Author(s): Mary Alldred, Stephen B. Baines, Stuart Findlay
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0181371

Effects of health risk assessment and counselling on physical activity in older people: A pragmatic randomised trial
Cited by: 12
Author(s): Anna Marie Herghelegiu, André Moser, Gabriel Ioan Prada, Stephan Born, Matthias Wilhelm, Andreas E. Stuck
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0257800

Enhanced copper-resistance gene repertoire in Alteromonas macleodii strains isolated from copper-treated marine coatings
Cited by: 4
Author(s): Kathleen D. Cusick, Ane Iturbide, Pratima Gautam, Amelia Price, Shawn W. Polson, Madolyn L. MacDonald, Ivan Erill
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0255421

Urban children’s connections to nature and environmental behaviors differ with age and gender
Cited by: 13
Author(s): Ryan J. Keith, Lisa M. Given, John M. Martin, Dieter F. Hochuli
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0243578

Novel computer-based assessments of everyday visual function in people with age-related macular degeneration
Cited by: 5
Author(s): Bethany E. Higgins, D. Wayne Taylor, Wei Bi, Alison Binns, David P. Crabb
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pone.0149458

Anatomical Grading for Metabolic Activity of Brown Adipose Tissue
Cited by: 20
Author(s): Anton S. Becker, Hannes W. Nagel, Christian Wolfrum, Irene A. Burger
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0190884

Allene oxide synthase, allene oxide cyclase and jasmonic acid levels in Lotus japonicus nodules
Cited by: 8
Author(s): Anna Zdyb, Marco Salgado, Kirill N. Demchenko, Wolfram G. Brenner, Małgorzata Płaszczyca, Michael Stumpe, Cornelia Herrfurth, Ivo Feußner, Katharina Pawlowski
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0200792

Lead content in wild game shot with lead or non-lead ammunition – Does “state of the art consumer health protection” require non-lead ammunition?
Cited by: 43
Author(s): Antje Gerofke, Ellen Ulbig, Annett Martin, Christine Müller‐Graf, Thomas Selhorst, Carl Gremse, Markus Spolders, Helmut Schafft, Gerhard Heinemeyer, Matthias Greiner, Monika Lahrssen‐Wiederholt, Andreas Hensel
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0203800

Alternative package leaflets improve people’s understanding of drug side effects—A randomized controlled exploratory survey
Cited by: 9
Author(s): Viktoria Mühlbauer, Roman Prinz, Ingrid Mühlhauser, Odette Wegwarth
Software Mentions: 1
Published: about 6 years ago

10.3390/biology10090899

Development of a Quantitative PCR Assay for Four Salmon Species Inhabiting the Yangyangnamdae River Using Environmental DNA
Cited by: 1
Author(s): Muhammad Hilman Fu'adil Amin, Ji‐Hyun Lee, Ah Ran Kim, Ju-Kyoung Kim, Chung Il Lee, Hyun Woo Kim
Software Mentions: 1
Published: about 3 years ago

10.3390/ijms21165784

Predicting the Development of Anti-Drug Antibodies against Recombinant alpha-Galactosidase A in Male Patients with Classical Fabry Disease
Cited by: 7
Author(s): Sanne J. van der Veen, Wytze J. Vlietstra, Laura van Dussen, André B. P. Kuilenburg, Marcel G. W. Dijkgraaf, Malte Lenders, Eva Brand, Christoph Wanner, Derralynn Hughes, Perry Elliott, Carla E. M. Hollak, Mirjam Langeveld
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0224491

Optimizing the procedure of grain nutrient predictions in barley via hyperspectral imaging
Cited by: 13
Author(s): Mathias Wiegmann, Andreas Backhaus, Udo Seiffert, William Thomas, Andrew J. Flavell, Klaus Pillen, Andreas Maurer
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms21176222

Enantiomerization of Axially Chiral Biphenyls: Polarizable MD Simulations in Water and Butylmethylether
Cited by: 4
Author(s): Veronika Zeindlhofer, Phillip S. Hudson, Ádám Márk Pálvölgyi, M. Welsch, Mazin Almarashi, H. Lee Woodcock, Bernard R. Brooks, Katharina Bica-Schröder, Christian Schröder
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0206044

Predictive models for codend size selectivity for four commercially important species in the Mediterranean bottom trawl fishery in spring and summer: Effects of codend type and catch size
Cited by: 12
Author(s): Jure Brčić, Bent Herrmann, Antonello Sala
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0253720

A normative database of A-scan data using the Heidelberg Spectralis Spectral Domain Optical Coherence Tomography machine
Cited by: 9
Author(s): Joos Meyer, Roshan Karri, Helen V. Danesh‐Meyer, Kate Drummond, R. C. Andrew Symons
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0254678

Integrative bioinformatics approaches to map key biological markers and therapeutic drugs in Extramammary Paget’s disease of the scrotum
Cited by: 12
Author(s): Nosheen Fatima, Muhammad Hamzah Saleem, Jen‐Tsung Chen, Muhammad Rizwan Javed, Wafa Abdullah I. Al-Megrin, Sidra Aslam
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0148266

Simvastatin Sodium Salt and Fluvastatin Interact with Human Gap Junction Gamma-3 Protein
Cited by: 3
Author(s): Andrew Marsh, Katherine Casey-Green, Fay Probert, David M. Withall, Daniel A. Mitchell, Suzanne J. Dilly, Sean James, Wade R. Dimitri, Sweta Ladwa, Paul C. Taylor, Donald R. J. Singer
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijms21186872

Systematic Analysis of Cold Stress Response and Diurnal Rhythm Using Transcriptome Data in Rice Reveals the Molecular Networks Related to Various Biological Processes
Cited by: 7
Author(s): Woo‐Jong Hong, Jiang Xu, Hye Ryun Ahn, Juyoung Choi, Seong-Ryong Kim, Ki‐Hong Jung
Software Mentions: 1
Published: about 4 years ago

10.3390/biology10090821

Comparison of Behavior and Space Use of the European Bullhead Cottus gobio and the Round Goby Neogobius melanostomus in a Simulated Natural Habitat
Cited by: 2
Author(s): Sara Roje, Bořek Drozd, Luise Richter, Jan Kubec, Z. Polívka, Susanne Worischka, Miloš Buřič
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0221689

Reference values for psychoacoustic tests on Polish school children 7–10 years old
Cited by: 5
Author(s): Elżbieta Włodarczyk, Agata Szkiełkowska, Henryk Skarżyńśki, Beata Miaśkiewicz, Henryk Skarżyńśki
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21218218

Defining Metaniches in the Oral Cavity According to Their Microbial Composition and Cytokine Profile
Cited by: 15
Author(s): Corinna L Seidel, Roman G. Gerlach, Patrick Wiedemann, Matthias Weider, Gabriele Rodrian, Michael Häder, Benjamin Frey, Udo S. Gaipl, Aline Bözec, Fabian Cieplik, Christian Kirschneck, Christian Bogdan, Lina Gölz
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0256862

Pharmacokinetics of tulathromycin in pregnant ewes (Ovis aries) challenged with Campylobacter jejuni
Cited by: 5
Author(s): Michael J. Yaeger, Jonathan P. Mochel, Zhongliang Wu, Paul J. Plummer, Orhan Şahin, Joseph Wayne Smith, Melda Meral Öcal, Ashenafi Feyisa Beyi, Changyun Xu, Qijing Zhang, Ronald W. Griffith
Software Mentions: 1
Published: over 3 years ago

10.3390/biology9100316

Systematic Ancient DNA Species Identification Fails to Find Late Holocene Domesticated Cattle in Southern Africa
Cited by: 3
Author(s): K. Ann Horsburgh, Anna L. Gosling
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms21228578

Succinic Semialdehyde Dehydrogenase Deficiency: In Vitro and In Silico Characterization of a Novel Pathogenic Missense Variant and Analysis of the Mutational Spectrum of ALDH5A1
Cited by: 3
Author(s): Heiko Brennenstuhl, Miroslava Didiášová, Birgit Assmann, Mariarita Bertoldi, Gianluca Molla, Sabine Jung-Klawitter, Oya Kuseyri Hübschmann, Julian Schröter, Thomas Opladen, Ritva Tikkanen
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0186499

Determinants of site of tuberculosis disease: An analysis of European surveillance data from 2003 to 2014
Cited by: 28
Author(s): Giovanni Sotgiu, Dennis Falzon, Vahur Hollo, Csaba Ködmön, Nicolas Lefèbvre, Andrei Dadu, Marieke van der Werf
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0252580

Genetically modified food and consumer risk responsibility: The effect of regulatory design and risk type on cognitive information processing
Cited by: 2
Author(s): Ashkan Pakseresht, Anna Kristina Edenbrandt, Carl Johan Lagerkvist
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0195510

Emergence of highly prevalent CA-MRSA ST93 as an occupational risk in people working on a pig farm in Australia
Cited by: 13
Author(s): Shafi Sahibzada, Marta Hernández‐Jover, David Jordan, Peter Thomson, Jane Heller
Software Mentions: 1
Published: over 6 years ago

10.1016/j.biopsych.2019.06.011

White Matter Microstructure and Its Relation to Longitudinal Measures of Depressive Symptoms in Mid- and Late Life
Cited by: 26
Author(s): Xueyi Shen, Mark J. Adams, Tuula E. Ritakari, Simon R. Cox, Andrew M. McIntosh, Heather C. Whalley
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0197760

Multiple recombination events between two cytochrome P450 loci contribute to global pyrethroid resistance in Helicoverpa armigera
Cited by: 49
Author(s): Tom Walsh, Nicole Joußen, Kai Tian, Angela McGaughran, C. A. Anderson, Xinghui Qiu, Seung‐Joon Ahn, Lisa J. Bird, Nena Pavlidi, John Vontas, Jaeeun Ryu, Akhtar Rasool, Isabella Barony Macedo, Wee Tek Tay, Yongjun Zhang, Mary Whitehouse, Pierre Silvie, Sharon Downes, Lori Nemec, David G. Heckel
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21238950

Exploring the Interaction between the SWI/SNF Chromatin Remodeling Complex and the Zinc Finger Factor CTCF
Cited by: 11
Author(s): Mariangela Valletta, Rosita Russo, Ilaria Baglivo, Veronica Russo, Sara Ragucci, Annamaria Sandomenico, Emanuela Iaccarino, Menotti Ruvo, Italia De Feis, Claudia Angelini, Sara Iachettini, Annamaria Biroccio, Paolo V. Pedone, Angela Chambery
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0203048

1H-NMR and MALDI-TOF MS as metabolomic quality control tests to classify platelet derived medium additives for GMP compliant cell expansion procedures
Cited by: 2
Author(s): Francesco Agostini, Marta Ruzza, Davide Corpillo, Luca Biondi, Elena Acquadro, Barbara Canepa, Alessandra Viale, Monica Battiston, Fabrizio Serra, Silvio Aime, M. Mazzucato
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0202756

Comparisons between context-specific and beverage-specific quantity frequency instruments to assess alcohol consumption indices: Individual and sample level analysis
Cited by: 4
Author(s): Polathep Vichitkunakorn, Karnsunaphat Balthip, Alan Geater, Sawitri Assanangkornchai
Software Mentions: 1
Published: over 6 years ago

10.1186/s12575-019-0115-z

Analytical Validation of Telomere Analysis Technology® for the High-Throughput Analysis of Multiple Telomere-Associated Variables
Cited by: 22
Author(s): Nuria de Pedro, Maria José Díez, Irene Lobón García, Jorge A. García, Lissette Otero, Luís Fernández, B. Garcia, Rut González, Sara Rincón, Diego Pérez, Estefanía Rodríguez, Enrique Segovia, Pilar Najarro
Software Mentions: 1
Published: almost 5 years ago

10.1371/annotation/f6708258-1101-40f2-9a91-be36b1b1afd8

Correction: Identifying Issue Frames in Text
Cited by: 0
Author(s): Eyal Sagi, Daniel Diermeier, Stefan Kaufmann
Software Mentions: 1
Published: almost 11 years ago

10.1155/2020/3589497

Picroside II Improves Severe Acute Pancreatitis-Induced Intestinal Barrier Injury by Inactivating Oxidative and Inflammatory TLR4-Dependent PI3K/AKT/NF-κB Signaling and Improving Gut Microbiota
Cited by: 25
Author(s): Xuehua Piao, Baohai Liu, Xiaodan Sui, Shuangdi Li, Wei Niu, Qingyu Zhang, Xuan Song, Shusheng Cai, Yuxin Fan
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0082186

The Efficient Method for Simultaneous Monitoring of the Culturable as Well as Nonculturable Airborne Microorganisms
Cited by: 18
Author(s): Barbara Hubad, Aleš Lapanje
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pcbi.1008119

Ten simple rules to increase computational skills among biologists with Code Clubs
Cited by: 5
Author(s): Ada K. Hagan, Nicholas A. Lesniak, Marcy J. Balunas, Lucas Bishop, William L. Close, Matthew K. Doherty, Amanda G. Elmore, Kaitlin J. Flynn, Geoffrey D. Hannigan, Charlie C. Koumpouras, Matthew L. Jenior, Ariangela J. Kozik, Kathryn McBride, Samara Rifkin, Joshua M. A. Stough, Kelly L Sovacool, Marc A. Sze, Sarah Tomkovich, Begüm D. Topçuoğlu, Patrick D. Schloss
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22020539

Inflammation in the Human Periodontium Induces Downregulation of the α1- and β1-Subunits of the sGC in Cementoclasts
Cited by: 3
Author(s): Yüksel Korkmaz, Behrus Puladi, Kerstin M. Galler, Peer W. Kämmerer, Agnes Schröder, Lina Gölz, Tim Sparwasser, Wilhelm Bloch, Andreas Friebe, James Deschner
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pcbi.1006468

Wrangling distributed computing for high-throughput environmental science: An introduction to HTCondor
Cited by: 10
Author(s): Richard A. Erickson, Michael N. Fienen, S. Grace McCalla, Emily L. Weiser, Melvin L. Bower, Jonathan M. Knudson, Greg Thain
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1003638

Are Current Atomistic Force Fields Accurate Enough to Study Proteins in Crowded Environments?
Cited by: 117
Author(s): Dražen Petrov, Bojan Žagrović
Software Mentions: 1
Published: over 10 years ago

10.1155/2020/1805418

An Integrated Fecal Microbiome and Metabolomics in T2DM Rats Reveal Antidiabetes Effects from Host-Microbial Metabolic Axis of EtOAc Extract from Sophora flavescens
Cited by: 29
Author(s): Jing Shao, Yi Liu, Huan Wang, Yun Luo, Lei Chen
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pcbi.1006360

ggsashimi: Sashimi plot revised for browser- and annotation-independent splicing visualization
Cited by: 137
Author(s): Diego Garrido-Martín, Emilio Palumbo, Roderic Guigó, Alessandra Breschi
Software Mentions: 1
Published: over 6 years ago

10.1242/bio.012138

Fluorescent proteins function as a prey attractant: experimental evidence from the hydromedusa Olindias formosus and other marine organisms
Cited by: 46
Author(s): Steven H. D. Haddock, Casey W. Dunn
Software Mentions: 1
Published: over 9 years ago

10.3390/ijms22041830

Exploitation of Tolerance of Wheat Kernel Weight and Shape-Related Traits from Aegilops tauschii under Heat and Combined Heat-Drought Stresses
Cited by: 10
Author(s): Gamila Mohamed Idris Elhadi, Nasrein Mohamed Kamal, Yasir Serag Alnor Gorafi, Yuji Yamasaki, Kanenori Takata, Izzat S. A. Tahir, Michael Itam, Hiroyuki Tanaka, Hisashi Tsujimoto
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pcbi.1004890

A Crowdsourcing Approach to Developing and Assessing Prediction Algorithms for AML Prognosis
Cited by: 29
Author(s): David Noren, Byron L. Long, Raquel Norel, Kahn Rrhissorrakrai, Kenneth R. Hess, Chenyue W. Hu, Alex Bisberg, André Schultz, Erik Engquist, Li Liu, Xihui Lin, Gregory M. Chen, Honglei Xie, Geoffrey A. M. Hunter, Paul C. Boutros, О. А. Степанов, Thea Norman, Stephen H. Friend, Gustavo Stolovitzky, Steven M. Kornblau, Amina A. Qutub
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pcbi.1006991

Neurogranin stimulates Ca2+/calmodulin-dependent kinase II by suppressing calcineurin activity at specific calcium spike frequencies
Cited by: 16
Author(s): Lu Li, Massimo Lai, S P Cole, Nicolas Le Novère, Stuart J. Edelstein
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pcbi.1004723

Evolutionary Genomics Suggests That CheV Is an Additional Adaptor for Accommodating Specific Chemoreceptors within the Chemotaxis Signaling Complex
Cited by: 33
Author(s): Davi R. Ortega, Igor B. Zhulin
Software Mentions: 1
Published: almost 9 years ago

Projects: cran: ggplot2

Papers Mentioning ggplot2 11,441