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Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: almost 3 years ago
4,921 dependent packages
2,865,232 downloads last month

Enhanced Analysis
Educational Contributors: wilke@austin.utexas.edu diggsb@ohsu.edu ruderman@usc.edu joran.elias@umontana.edu rjc2003@qatar-med.cornell.edu skopf@caltech.edu m.colombo@ed.ac.uk i.kosmidis@ucl.ac.uk melimore86@ufl.edu amurray@vt.edu nick.kennedy@ed.ac.uk dongzhuoer@mail.nankai.edu.cn benjamin.reisman@vanderbilt.edu briandk@umd.edu hye@ucsd.edu thiyanga.talagala@monash.edu brenstsr@miamioh.edu saladi@caltech.edu buyske@stat.rutgers.edu rjake@sas.upenn.edu mcmurdie@stanford.edu paul@stat.auckland.ac.nz claire.mcwhite@utexas.edu luke.mcguinness@bristol.ac.uk mdlama@wm.edu hjeppson@iastate.edu
Repository Activity:
Repository Owner: tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses
  • +520 Educational commit emails
    26 contributors with educational email addresses
  • +18 Science terms in README
    9 scientific terms found in README
Very Likely Science (100)

Papers Mentioning ggplot2 11,441

10.3389/fpls.2019.00279
Applications of Unmanned Aerial Vehicle Based Imagery in Turfgrass Field Trials
Cited by: 33
Author(s): Jing Zhang, Simerjeet Virk, Wesley Porter, Kevin E. Kenworthy, D. G. Sullivan, Brian M. Schwartz
Software Mentions: 1
Published: over 7 years ago
10.18632/oncotarget.23687
Inferring modes of evolution from colorectal cancer with residual polyp of origin
Cited by: 2
Author(s): Min‐Soo Kim, Brooke R. Druliner, Nikolaos Vasmatzis, Taejeong Bae, Nicholas Chia, Alexej Abyzov, Lisa A. Boardman
Software Mentions: 1
Published: over 8 years ago
10.3389/fpls.2017.01690
Management of Fruit Species in Urban Home Gardens of Argentina Atlantic Forest as an Influence for Landscape Domestication
Cited by: 6
Author(s): Violeta Furlan, María Lelia Pochettino, Norma I. Hilgert
Software Mentions: 1
Published: almost 9 years ago
10.3389/fpls.2020.631643
Interaction Between the SNARE SYP121 and the Plasma Membrane Aquaporin PIP2;7 Involves Different Protein Domains
Cited by: 6
Author(s): Timothée Laloux, Irwin Matyjaszczyk, Simon Beaudelot, Charles Hachez, François Chaumont
Software Mentions: 1
Published: over 5 years ago
10.1186/s12903-021-01838-z
Morphometry and displacement analysis of the upper lips following maxillary full-arch implant-supported fixed prostheses: a 3D morphometric study
Cited by: 0
Author(s): Ke-Yi Hao, Jing Luo, Ping Di, Yu Zhang, Ye Lin
Software Mentions: 1
Published: almost 5 years ago
10.3389/fpls.2017.00138
Genetic Diversity and Population Structure of Two Tomato Species from the Galapagos Islands
Cited by: 32
Author(s): Yveline Pailles, Shwen Ho, Inês S. Pires, Mark Tester, Sónia Negrão, Sandra M. Schmöckel
Software Mentions: 1
Published: over 9 years ago
10.3389/fpls.2020.536507
Holocentric Karyotype Evolution in Rhynchospora Is Marked by Intense Numerical, Structural, and Genome Size Changes
Cited by: 11
Author(s): Paula Burchardt, Christopher E. Buddenhagen, Marcos Letaif Gaeta, Murilo D Souza, André Marques, André Luís Laforga Vanzela
Software Mentions: 1
Published: almost 6 years ago
10.1007/s00125-018-4680-5
Magnesium deficiency prevents high-fat-diet-induced obesity in mice
Cited by: 14
Author(s): Steef Kurstjens, Janna A. van Diepen, Caro Bos, Wynand Alkema, René J. M. Bindels, Frances M. Ashcroft, Cees J. Tack, Joost G. J. Hoenderop, Jeroen H. F. de Baaij
Software Mentions: 1
Published: about 8 years ago
10.1038/s41419-021-03895-2
H2A.Z acetylation by lincZNF337-AS1 via KAT5 implicated in the transcriptional misregulation in cancer signaling pathway in hepatocellular carcinoma
Cited by: 8
Author(s): Yuan Yin, Wen Cao, Hua-Fu Zhou, Haixin Qian, Honggang Wang
Software Mentions: 1
Published: about 5 years ago
10.3389/fpls.2019.01763
Parallel Microbial Ecology of Pasteuria and Nematode Species in Scottish Soils
Cited by: 5
Author(s): Jamie Orr, Roy Neilson, Thomas E. Freitag, David M. Roberts, Keith Davies, Vivian C. Blok, Peter J. A. Cock
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.11803
Identification of consistent post-translational regulatory triplets related to oncogenic and tumour suppressive modulators in childhood acute lymphoblastic leukemia
Cited by: 0
Author(s): YongKiat Wee, Yining Liu, Min Zhao
Software Mentions: 1
Published: about 5 years ago
10.1186/s12936-018-2511-2
Dramatic decreases of malaria transmission intensities in Ifakara, south-eastern Tanzania since early 2000s
Cited by: 37
Author(s): Marceline Finda, Alex J. Limwagu, Halfan S. Ngowo, Nancy S. Matowo, Johnson Kyeba Swai, Emmanuel W. Kaindoa, Fredros O. Okumu
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0247783
Transcriptome analysis of the role of autophagy in plant response to heat stress
Cited by: 4
Author(s): Yan Zhang, Haoxuan Min, Chengchen Shi, Xia Gao, Zhibing Lai
Software Mentions: 1
Published: over 5 years ago
10.3389/fpls.2019.00691
A Large-Scale Genome-Wide Association Analyses of Ethiopian Sorghum Landrace Collection Reveal Loci Associated With Important Traits
Cited by: 49
Author(s): Gezahegn Girma, Habte Nida, Amare Seyoum, Moges Mekonen, Amare Nega, Dagnachew Lule, Kebede Dessalegn, Alemnesh Bekele, A Gebre-Yohannes, Adedayo Adeyanju, Alemu Tirfessa, Getachew Ayana, Taye Taddese, Firew Mekbib, Ketema Belete, Tesfaye Tesso, Gebisa Ejeta, Tesfaye Mengiste
Software Mentions: 1
Published: about 7 years ago
10.3389/fpls.2016.00105
Effect of Light Acclimation on the Organization of Photosystem II Super- and Sub-Complexes in Arabidopsis thaliana
Cited by: 47
Author(s): Ludwik W. Bielczynski, Gert Schansker, Roberta Croce
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0146538
Knowledge of Bovine Tuberculosis, Cattle Husbandry and Dairy Practices amongst Pastoralists and Small-Scale Dairy Farmers in Cameroon
Cited by: 38
Author(s): Robert F. Kelly, Saidou M. Hamman, K. L. Morgan, Egbe Franklyn Nkongho, Victor Ngu Ngwa, Vincent N. Tanya, Walters N. Andu, Melissa Sander, Lucy Ndip, Ian Handel, Stella Mazeri, Adrian Muwonge, Barend M. deC. Bronsvoort
Software Mentions: 1
Published: over 10 years ago
10.7717/peerj.10155
Conflicting phylogenetic signals in plastomes of the tribe Laureae (Lauraceae)
Cited by: 23
Author(s): Tian‐Wen Xiao, Yong Xu, Lu Jin, Tong-Jian Liu, Hai‐Fei Yan, Xue‐Jun Ge
Software Mentions: 1
Published: almost 6 years ago
10.7717/peerj.10476
Determinants of behavioural and biological risk factors for cardiovascular diseases from state level STEPS survey (2017–19) in Madhya Pradesh
Cited by: 2
Author(s): Arun Kokane, Rajnish Joshi, Ashwin Kotnis, Anirban Chatterjee, Krishna Kumar Yadav, G Revadi, Ankur Joshi, Abhijit Pakhare
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0099782
Human Coronaviruses Associated with Upper Respiratory Tract Infections in Three Rural Areas of Ghana
Cited by: 63
Author(s): Michael Owusu, Augustina Annan, Victor M. Corman, Richard Larbi, Priscilla Anti, Jan Felix Drexler, Olivia Agbenyega, Yaw Adu‐Sarkodie, Christian Drosten
Software Mentions: 1
Published: about 12 years ago
10.7717/peerj.7341
Epidemiological analysis of respiratory and intestinal infectious diseases in three counties of Sichuan: the baseline survey of Disaster Mitigation Demonstration Area in western China
Cited by: 3
Author(s): Zhiqiang Xue, Zongrui Yang, Huanhuan Sun, Ren JingHuan, Mengzi Sun, Jiagen Li, Anning Zhang, Pingping Zheng, Pan Pan, Jing Dou, Li Shen, Chen Yang, Kexin Li, Tianyu Feng, Yaogai Lv, Chunli Bi, Lina Jin, Zhe Wang, Yan Yao
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0185762
The common oncogenomic program of NOTCH1 and NOTCH3 signaling in T-cell acute lymphoblastic leukemia
Cited by: 29
Author(s): Sung Hee Choi, Eric Allan Severson, Warren S. Pear, Xiaole S. Liu, Jon C. Aster, Stephen C. Blacklow
Software Mentions: 1
Published: almost 9 years ago
10.7717/peerj.11791
Associations of individual and joint expressions of ERCC6 and ERCC8 with clinicopathological parameters and prognosis of gastric cancer
Cited by: 2
Author(s): Jing Chen, Liang Li, Liping Sun, Yuan Yuan, Jingjing Jing
Software Mentions: 1
Published: about 5 years ago
10.1186/s12903-020-01255-8
Accuracy of remote diagnoses using intraoral scans captured in approximate true color: a pilot and validation study in teledentistry
Cited by: 17
Author(s): Sabrina Jenny Steinmeier, Daniel B. Wiedemeier, Christoph H. F. Hämmerle, Sven Mühlemann
Software Mentions: 1
Published: almost 6 years ago
10.7717/peerj.858
Capsules of the diatom<i>Achnanthidium minutissimum</i>arise from fibrillar precursors and foster attachment of bacteria
Cited by: 11
Author(s): Katrin Leinweber, Peter G. Kroth
Software Mentions: 1
Published: over 11 years ago
10.1038/s41396-019-0445-5
Pyrethroid exposure alters internal and cuticle surface bacterial communities in Anopheles albimanus
Cited by: 39
Author(s): Nsa Dada, Juan C. Lol, Ana Cristina Benedict, Francisco López, Mili Sheth, Nicole Dzuris, Norma Padilla, Audrey Lenhart
Software Mentions: 1
Published: about 7 years ago
10.7717/peerj.11996
A highly effective and self-transmissible CRISPR antimicrobial for elimination of target plasmids without antibiotic selection
Cited by: 8
Author(s): Panjaporn Wongpayak, Orapan Meesungnoen, Somchai Saejang, Pakpoom Subsoontorn
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12936-020-03395-2
Is Anopheles gambiae attraction to floral and human skin-based odours and their combination modulated by previous blood meal experience?
Cited by: 2
Author(s): ELISON ELIEZA KEMIBALA, Agenor Mafra‐Neto, Jesse Saroli, Rodrigo Silva, Anitha Philbert, Kija Ng’habi, Woodbridge A. Foster, Teun Dekker, Leonard E. G. Mboera
Software Mentions: 1
Published: almost 6 years ago
10.7717/peerj.7378
Rapid response to anthropogenic climate change by<i>Thuja occidentalis</i>: implications for past climate reconstructions and future climate predictions
Cited by: 11
Author(s): Rebekah Stein, Nathan D. Sheldon, Selena Y. Smith
Software Mentions: 1
Published: about 7 years ago
10.1016/j.csbj.2019.03.001
Evolution of Genomic Base Composition: From Single Cell Microbes to Multicellular Animals
Cited by: 24
Author(s): Jon Bohlin, John H.‐O. Pettersson
Software Mentions: 1
Published: over 7 years ago
10.7717/peerj.1278
Development, factor structure and application of the Dog Obesity Risk and Appetite (DORA) questionnaire
Cited by: 33
Author(s): Eleanor Raffan, Stephen Smith, Stephen O’Rahilly, Jane Wardle
Software Mentions: 1
Published: almost 11 years ago
10.3389/fmicb.2018.02415
Conversion of Methionine to Cysteine in Lactobacillus paracasei Depends on the Highly Mobile cysK-ctl-cysE Gene Cluster
Cited by: 8
Author(s): Daniel Wüthrich, Stefan Irmler, Hélène Berthoud, Barbara Guggenbühl, Elisabeth Eugster, Rémy Bruggmann
Software Mentions: 1
Published: almost 8 years ago
10.1186/s12870-019-1781-3
Genetic architecture of grain yield in bread wheat based on genome-wide association studies
Cited by: 134
Author(s): Faji Li, Weie Wen, Jindong Liu, Yong Zhang, Shuanghe Cao, Zhonghu He, Awais Rasheed, Hui Jin, Chi Zhang, Jun Yan, Pingzhi Zhang, Yat-wah Wan, Xianchun Xia
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2019.00487
Detection of Aminoglycoside Resistant Bacteria in Sludge Samples From Norwegian Drinking Water Treatment Plants
Cited by: 15
Author(s): Ingvild Falkum Ullmann, Hege Smith Tunsjø, Monica Andreassen, Kaare Magne Nielsen, Vidar Lund, Colin Charnock
Software Mentions: 1
Published: over 7 years ago
10.1155/2020/3589497
Picroside II Improves Severe Acute Pancreatitis-Induced Intestinal Barrier Injury by Inactivating Oxidative and Inflammatory TLR4-Dependent PI3K/AKT/NF-<i>κ</i>B Signaling and Improving Gut Microbiota
Cited by: 25
Author(s): Xuehua Piao, Baohai Liu, Xiaodan Sui, Shuangdi Li, Wei Niu, Qingyu Zhang, Xuan Song, Shusheng Cai, Yuxin Fan
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2019.02502
Microbiome Response to Hot Water Treatment and Potential Synergy With Biological Control on Stored Apples
Cited by: 47
Author(s): Birgit Wassermann, Peter Kusstatscher, Gabriele Berg
Software Mentions: 1
Published: almost 7 years ago
10.3390/cancers12051080
YM155-Adapted Cancer Cell Lines Reveal Drug-Induced Heterogeneity and Enable the Identification of Biomarker Candidates for the Acquired Resistance Setting
Cited by: 4
Author(s): Martin Michaelis, Mark N. Wass, Ian Reddin, Yvonne Voges, Florian Rothweiler, Stephanie Hehlgans, Jaroslav Činátl, Marco Mernberger, Andrea Nist, Thorsten Stiewe, Franz Rödel, Jindřich Činátl
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.10775
Systematics of ‘lithistid’ tetractinellid demosponges from the Tropical Western Atlantic—implications for phylodiversity and bathymetric distribution
Cited by: 8
Author(s): Astrid Schuster, Shirley A. Pomponi, Andrzej Pisera, Paco Cárdenas, Michelle Kelly, Gert Wörheide, Dirk Erpenbeck
Software Mentions: 1
Published: over 5 years ago
10.3389/fmicb.2021.684092
Complete Genome Sequence of Xylella taiwanensis and Comparative Analysis of Virulence Gene Content With Xylella fastidiosa
Cited by: 6
Author(s): Ling-Wei Weng, Yuchen Lin, Chiou-Chu Su, Cheng Tung Huang, Shu-Ting Cho, Aiping Chen, Shu‐Jen Chou, Chang‐Her Tsai, Chih-Horng Kuo
Software Mentions: 1
Published: over 5 years ago
10.18632/oncotarget.19926
Mitochondrial genome variation and prostate cancer: a review of the mutational landscape and application to clinical management
Cited by: 25
Author(s): Anton M.F. Kalsbeek, Eva Chan, Niall M. Corcoran, Christopher M. Hovens, Vanessa M. Hayes
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0137139
Exploring a Tomato Landraces Collection for Fruit-Related Traits by the Aid of a High-Throughput Genomic Platform
Cited by: 71
Author(s): Adriana Sacco, Valentino Ruggieri, Mario Parisi, Giovanna Festa, Maria Manuela Rigano, Maurizio Enea Picarella, Andrea Mazzucato, Amalia Barone
Software Mentions: 1
Published: almost 11 years ago
10.18632/oncotarget.18032
Transcriptome analysis reveals a role for the endothelial ANP-GC-A signaling in interfering with pre-metastatic niche formation by solid cancers
Cited by: 3
Author(s): Takashi Nojiri, Miki Arai, Yutaka Suzuki, Motofumi Kumazoe, Takeshi Tokudome, Koichi Miura, Jun Hino, Hiroshi Hosoda, Minoru Miyazato, Meinoshin Okumura, Shinpei Kawaoka, Kenji Kangawa
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0066151
Optical Coherence Tomography Reveals Distinct Patterns of Retinal Damage in Neuromyelitis Optica and Multiple Sclerosis
Cited by: 149
Author(s): Eric Schneider, Hanna Zimmermann, Timm Oberwahrenbrock, Falko Kaufhold, Ella Maria Kadas, Axel Petzold, F Bilger, Nadja Borisow, Sven Jarius, Brigitte Wildemann, Klemens Ruprecht, Alexander U. Brandt, Friedemann Paul
Software Mentions: 1
Published: about 13 years ago
10.3390/cancers12010070
Integrated Analysis of Structural Variation and RNA Expression of FGFR2 and Its Splicing Modulator ESRP1 Highlight the ESRP1amp-FGFR2norm-FGFR2-IIIchigh Axis in Diffuse Gastric Cancer
Cited by: 12
Author(s): Sara Pinto Teles, Patrícia Oliveira, Marta Ferreira, Joana Carvalho, Pedro Ferreira, Carla Oliveíra
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.8786
Identification of core genes associated with prostate cancer progression and outcome via bioinformatics analysis in multiple databases
Cited by: 14
Author(s): Yutao Wang, Jianfeng Wang, Kexin Yan, Jiaxing Lin, Zhenhua Zheng, Jianbin Bi
Software Mentions: 1
Published: over 6 years ago
10.1186/s12917-021-02883-0
Fetal hypoxia and apoptosis following maternal porcine reproductive and respiratory syndrome virus (PRRSV) infection
Cited by: 8
Author(s): Carolina Maciel Malgarin, Fiona Moser, J. Alex Pasternak, Glenn Hamonic, Susan E. Detmer, Daniel J. MacPhee, John C. S. Harding
Software Mentions: 1
Published: over 5 years ago
10.3389/fmicb.2019.00493
Characterization of the Interactive Effects of Labile and Recalcitrant Organic Matter on Microbial Growth and Metabolism
Cited by: 10
Author(s): Lauren N. M. Quigley, Abigail Edwards, Andrew D. Steen, Alison Buchan
Software Mentions: 1
Published: over 7 years ago
10.1038/ismej.2017.88
Nitrogen cost minimization is promoted by structural changes in the transcriptome of N-deprived Prochlorococcus cells
Cited by: 25
Author(s): Robert W. Read, Paul M. Berube, Steven J. Biller, Iva Neveux, Andrés Cubillos-Ruiz, Sallie W. Chisholm, Joseph J. Grzymski
Software Mentions: 1
Published: about 9 years ago
10.1007/s00125-019-04980-0
Circulating metabolites in progression to islet autoimmunity and type 1 diabetes
Cited by: 29
Author(s): Santosh Lamichhane, Esko Kemppainen, Kajetan Trošt, Heli Siljander, Heikki Hyöty, Jorma Ilonen, Jorma Toppari, Riitta Veijola, Tuulia Hyötyläinen, Mikael Knip, Matej Orešič
Software Mentions: 1
Published: almost 7 years ago
10.1016/j.chembiol.2017.03.001
A Ratiometric Sensor for Imaging Insulin Secretion in Single β Cells
Cited by: 12
Author(s): Martina Schifferer, Dmytro A. Yushchenko, Frank Stein, Andrey Bolbat, Carsten Schultz
Software Mentions: 1
Published: over 9 years ago
10.1242/dev.165068
Hedgehog signaling regulates cell motility and optic fissure and stalk formation during vertebrate eye morphogenesis
Cited by: 31
Author(s): Hannah B. Gordon, Sarah Lusk, Keith R. Carney, Emily O. Wirick, Brooke Froelich Murray, Kristen M. Kwan
Software Mentions: 1
Published: over 8 years ago
10.7717/peerj.7752
Transcriptome analysis of the induction of somatic embryogenesis in <i>Coffea canephora</i> and the participation of ARF and Aux/IAA genes
Cited by: 22
Author(s): Ana O. Quintana-Escobar, Geovanny I. Nic-Can, Rosa María Galaz Avalos, Víctor M. Loyola‐Vargas, Elsa Góngora-Castillo
Software Mentions: 1
Published: almost 7 years ago
10.1242/dev.181420
Optic cup morphogenesis requires neural crest-mediated basement membrane assembly
Cited by: 40
Author(s): Chase D. Bryan, Macaulie A. Casey, Rebecca L. Pfeiffer, Bryan W. Jones, Kristen M. Kwan
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2021.698970
Antibiotic Breakdown by Susceptible Bacteria Enhances the Establishment of β-Lactam Resistant Mutants
Cited by: 8
Author(s): Manja Saebelfeld, Suman Das, Jorn Brink, Arno Hagenbeek, Joachim Krug, Jaap Visser
Software Mentions: 1
Published: about 5 years ago
10.1038/s41396-018-0325-4
Nitric oxide production and antioxidant function during viral infection of the coccolithophore Emiliania huxleyi
Cited by: 19
Author(s): Brittany Schieler, Megha V. Soni, Christopher M. Brown, Marco J. L. Coolen, Helen F. Fredricks, Benjamin A. S. Van Mooy, Donald J. Hirsh, Kay D. Bidle
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2018.03360
Exploiting the Richness of Environmental Waterborne Bacterial Species to Find Natural Legionella pneumophila Competitors
Cited by: 22
Author(s): Marie Hélène Corre, Vincent Delafont, Anasthasia Legrand, Jean‐Marc Berjeaud, Julien Verdon
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2019.00160
Diversity and Distribution of Sulfur Oxidation-Related Genes in Thioalkalivibrio, a Genus of Chemolithoautotrophic and Haloalkaliphilic Sulfur-Oxidizing Bacteria
Cited by: 43
Author(s): Tom Berben, Lex Overmars, Dimitry Y. Sorokin, Gerard Muyzer
Software Mentions: 1
Published: over 7 years ago
10.7717/peerj.12147
Exosomal hsa-miR-21-5p is a biomarker for breast cancer diagnosis
Cited by: 24
Author(s): Min Liu, Fei Mo, Xiaohan Song, Yun He, Yan Yuan, Jiaoyan Yan, Ye Yang, Jian Huang, Shu Zhang
Software Mentions: 1
Published: almost 5 years ago
10.7717/peerj.2593
Who’s your mama? Riverine hybridisation of threatened freshwater Trout Cod and Murray Cod
Cited by: 16
Author(s): Alan J Couch, Peter J. Unmack, Fiona Dyer, Mark Lintermans
Software Mentions: 1
Published: almost 10 years ago
10.1186/s12966-020-00944-5
Recent changes in the Dutch foodscape: socioeconomic and urban-rural differences
Cited by: 33
Author(s): Maria Gabriela Matias de Pinho, Joreintje D. Mackenbach, Nicolette R. den Braver, Joline W.J. Beulens, Johannes Brug, Jeroen Lakerveld
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2017.01726
In Silico Screening of the Human Gut Metaproteome Identifies Th17-Promoting Peptides Encrypted in Proteins of Commensal Bacteria
Cited by: 18
Author(s): Claudio Hidalgo-Cantabrana, Marco Antonio Moro-García, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Anália Lourenço, Rebeca Alonso-Arias, Borja Sánchez
Software Mentions: 1
Published: almost 9 years ago
10.7717/peerj.3645
A comparison of two common sample preparation techniques for lipid and fatty acid analysis in three different coral morphotypes reveals quantitative and qualitative differences
Cited by: 26
Author(s): Jessica A. Conlan, Melissa M. Rocker, David S. Francis
Software Mentions: 1
Published: about 9 years ago
10.1155/2020/1805418
An Integrated Fecal Microbiome and Metabolomics in T2DM Rats Reveal Antidiabetes Effects from Host-Microbial Metabolic Axis of EtOAc Extract from <i>Sophora flavescens</i>
Cited by: 29
Author(s): Jing Shao, Yi Liu, Huan Wang, Yun Luo, Lei Chen
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0213293
Potential role of weather, soil and plant microbial communities in rapid decline of apple trees
Cited by: 22
Author(s): Jugpreet Singh, Katchen Julliany Pereira Silva, Marc Fuchs, Awais Khan
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2020.578115
Transcriptome Profiling Provides Insights Into Potential Antagonistic Mechanisms Involved in Chaetomium globosum Against Bipolaris sorokiniana
Cited by: 16
Author(s): K Darshan, Rashmi Aggarwal, Bishnu Maya Bashyal, Jagmohan Singh, V. Shanmugam, Malkhan Singh Gurjar, Amolkumar U. Solanke
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0154807
Virtual Hand Feedback Reduces Reaction Time in an Interactive Finger Reaching Task
Cited by: 9
Author(s): Johannes Brand, Marco Piccirelli, Marie-Claude Hepp-Reymond, Manfred Morari, Lars Michels, Kynan Eng
Software Mentions: 1
Published: over 10 years ago
10.3389/fmed.2021.663396
HLA Variants and Inhibitor Development in Hemophilia A: A Retrospective Case-Controlled Study Using the ATHNdataset
Cited by: 4
Author(s): Joseph R. McGill, Vijaya L. Simhadri, Zuben E. Sauna
Software Mentions: 1
Published: over 5 years ago
10.1186/s13046-016-0317-z
Pancreatic cancer cell-derived IGFBP-3 contributes to muscle wasting
Cited by: 37
Author(s): Xiuyan Huang, Zili Huang, Juhong Yang, Yingbin Xu, Jiusong Sun, Qi Zheng, Chunyao Wei, Wei Song, Yuan Zhang
Software Mentions: 1
Published: over 10 years ago
10.1242/dev.167031
Basal epithelial tissue folding is mediated by differential regulation of microtubules
Cited by: 4
Author(s): Mike R Visetsouk, Elizabeth J. Falat, Ryan J. Garde, Jennifer Wendlick, Jennifer H. Gutzman
Software Mentions: 1
Published: over 8 years ago
10.3389/fmed.2020.00064
Immune and Stroma Related Genes in Breast Cancer: A Comprehensive Analysis of Tumor Microenvironment Based on the Cancer Genome Atlas (TCGA) Database
Cited by: 42
Author(s): Ming Xu, Li Yu, Wenhui Li, Qiu Zhao, Qiulei Zhang, Kehao Le, Ziwei Huang, Pengfei Yi
Software Mentions: 1
Published: over 6 years ago
10.3389/fmed.2021.699706
Laboratory Testing Implications of Risk-Stratification and Management of COVID-19 Patients
Cited by: 2
Author(s): Caidong Liu, Ziyu Wang, Wei Wu, Changgang Xiang, Lingxiang Wu, Jie Li, Weiye Hou, Huiling Sun, Youli Wang, Zhenling Nie, Yingdong Gao, Ruisheng Zhang, Hong Tang, Qianghu Wang, Kening Li, Xinyi Xia, Pengping Li, Shukui Wang
Software Mentions: 1
Published: about 5 years ago
10.3390/cancers11040511
LC/MS-Based Polar Metabolite Profiling Identified Unique Biomarker Signatures for Cervical Cancer and Cervical Intraepithelial Neoplasia Using Global and Targeted Metabolomics
Cited by: 31
Author(s): Imran Khan, Miso Nam, Minji Kwon, Seung‐Woo Seo, Sunhee Jung, Jiyou Han, Geum‐Sook Hwang, Mi Kyung Kim
Software Mentions: 1
Published: over 7 years ago
10.1186/s13046-019-1384-8
Hypoxic exosomes facilitate angiogenesis and metastasis in esophageal squamous cell carcinoma through altering the phenotype and transcriptome of endothelial cells
Cited by: 82
Author(s): Yu Mao, Yimin Wang, Dong Liu, Yunjie Zhang, Yanqiu Zhang, Chao Wang, Qiang Zhang, Shuanying Yang, Liyan Cao, Mengjie Zhang, Xin Li, Zhanzhao Fu
Software Mentions: 1
Published: almost 7 years ago
10.18632/oncotarget.15236
Stat5 deficiency decreases transcriptional heterogeneity and supports emergence of hematopoietic sub-populations
Cited by: 2
Author(s): Zhengqi Wang, Kevin D. Bunting
Software Mentions: 1
Published: over 9 years ago
10.1186/s13104-019-4734-x
A 9-year longitudinal study on trajectories of aggressive and depressive symptoms in male and female children with overweight
Cited by: 5
Author(s): Luca Cerniglia, Silvia Cimino, Michela Erriu, Stanislav Ježek, Carlos A. Almenara, Renata Tambelli
Software Mentions: 1
Published: almost 7 years ago
10.3389/fnint.2016.00013
Attentional Resource Allocation in Visuotactile Processing Depends on the Task, But Optimal Visuotactile Integration Does Not Depend on Attentional Resources
Cited by: 27
Author(s): Basil Wahn, Peter König
Software Mentions: 1
Published: over 10 years ago
10.1186/s13046-020-01718-4
Mir-20a-5p induced WTX deficiency promotes gastric cancer progressions through regulating PI3K/AKT signaling pathway
Cited by: 31
Author(s): Jian Li, Danli Ye, Peng Shen, Xiaorong Liu, Peirong Zhou, Gangjie Zhu, Yangwei Xu, Yun Fu, Xuanqi Li, Jingbo Sun, Jian Xu, Qingling Zhang
Software Mentions: 1
Published: almost 6 years ago
10.1016/j.devcel.2017.12.003
CRISPR Screens Uncover Genes that Regulate Target Cell Sensitivity to the Morphogen Sonic Hedgehog
Cited by: 93
Author(s): Ganesh V. Pusapati, Jennifer H. Kong, Bansari Patel, Arunkumar Krishnan, Andreas Sagner, Maia Kinnebrew, James Briscoe, L. Aravind, Rajat Rohatgi
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0251625
Effects of experimental warming on Betula nana epidermal cell growth tested over its maximum climatological growth range
Cited by: 4
Author(s): Fabian E.Z. Ercan, Juha Mikola, Tarja Silfver, Kristiina Myller, Elina Vainio, Sandra Słowińska, Michael Słowiński, Mariusz Lamentowicz, Daan Blok, Friederike Wagner-Cremer
Software Mentions: 1
Published: over 5 years ago
10.1186/s13046-021-01848-3
Overexpression of NELFE contributes to gastric cancer progression via Wnt/β-catenin signaling-mediated activation of CSNK2B expression
Cited by: 10
Author(s): Shijun Yu, Li Li, Hui Cai, Bin He, Yong Gao, Yandong Li
Software Mentions: 1
Published: over 5 years ago
10.3389/fimmu.2019.00085
Cell Type-Specific Roles of NF-κB Linking Inflammation and Thrombosis
Cited by: 344
Author(s): Marion Mußbacher, Manuel Salzmann, Christine Brostjan, Bastian Hoesel, Christian Schoergenhofer, Hannes Datler, Philipp J. Hohensinner, José Basílio, Peter Petzelbauer, Alice Assinger, Johannes A. Schmid
Software Mentions: 1
Published: over 7 years ago
10.3390/cancers13010028
High Risk α-HPV E6 Impairs Translesion Synthesis by Blocking POLη Induction
Cited by: 6
Author(s): Sebastian O. Wendel, Jazmine A. Snow, Tyler Bastian, Laura Brown, Candy Hernandez, Emily Burghardt, Andrew Kahn, Vaibhav Murthy, Daniel Neill, Zachary C Smith, Kevin A. Ault, Ossama Tawfik, Cen Wu, Nicholas A. Wallace
Software Mentions: 1
Published: over 5 years ago
10.3389/fimmu.2020.614781
Plasma TNFSF13B and TNFSF14 Function as Inflammatory Indicators of Severe Adenovirus Pneumonia in Pediatric Patients
Cited by: 13
Author(s): Huifeng Fan, Bingtai Lu, Can Cao, Hui Li, Diyuan Yang, Li Huang, Tao Ding, Minhao Wu, Gen Liu
Software Mentions: 1
Published: over 5 years ago
10.1186/s12964-020-00615-9
SRSF1 regulates exosome microRNA enrichment in human cancer cells
Cited by: 19
Author(s): Yifan Xu, Xiaohui Xu, Amy Gin, Jean D. Nshimiyimana, Blaine H. M. Mooers, Massimo Caputi, Bethany N. Hannafon, Wei‐Qun Ding
Software Mentions: 1
Published: about 6 years ago
10.3389/fimmu.2020.584423
Tumor Infiltrating Effector Memory Antigen-Specific CD8+ T Cells Predict Response to Immune Checkpoint Therapy
Cited by: 37
Author(s): Nicola Principe, Joel Kidman, Siting Goh, Caitlin M. Tilsed, Scott Fisher, Vanessa S. Fear, Catherine A. Forbes, Rachael M. Zemek, Abha Chopra, Mark W. Watson, Ian M. Dick, Louis Boon, Robert A. Holt, Richard Lake, Anna K. Nowak, W. Joost Lesterhuis, Alison M. McDonnell, Jonathan Chee
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12870-021-02837-6
The genetics and physiology of seed dormancy, a crucial trait in common bean domestication
Cited by: 20
Author(s): Afshin Soltani, Katelynn Walter, Andrew T. Wiersma, James P. Santiago, Michelle Quiqley, Daniel H. Chitwood, Timothy G. Porch, Phillip N. Miklas, Phillip E. McClean, Juan M. Osorno, David B. Lowry
Software Mentions: 1
Published: over 5 years ago
10.3389/fimmu.2020.605170
Deep Sequencing of B Cell Receptor Repertoires From COVID-19 Patients Reveals Strong Convergent Immune Signatures
Cited by: 81
Author(s): Jacob D. Galson, Sebastian Schaetzle, Rachael Bashford-Rogers, Matthew I. J. Raybould, Aleksandr Kovaltsuk, Gavin J. Kilpatrick, Ralph Minter, Donna K. Finch, Jorge Amil Dias, Louisa K. James, Gavin Thomas, Wing-Yiu Jason Lee, Jason R. Betley, Olivia Cavlan, Alex Leech, Charlotte Deane, Joan Seoane, Carlos Caldas, Daniel J. Pennington, Paul Pfeffer, Jane Osbourn
Software Mentions: 1
Published: over 5 years ago
10.18632/oncotarget.11392
Association mining of mutated cancer genes in different clinical stages across 11 cancer types
Cited by: 9
Author(s): Wangxiong Hu, Xiaofen Li, Tingzhang Wang, Shu Zheng
Software Mentions: 1
Published: about 10 years ago
10.1186/s13104-020-4917-5
Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli
Cited by: 16
Author(s): Daniel W. Nielsen, Nicole Ricker, Nicolle Lima Barbieri, Heather K. Allen, Lisa K. Nolan, Catherine M. Logue
Software Mentions: 1
Published: over 6 years ago
10.1186/s13104-020-04980-z
Influence of storage conditions of small volumes of blood on immune transcriptomic profiles
Cited by: 2
Author(s): Rebecca Mathew, Mohammed Toufiq, Valentina Di Mattei, Muna Al Hashmi, Harshitha Shobha Manjunath, Basirudeen Syed Ahamed Kabeer, Rita Calzone, Chiara Cugno, Sara Deola, Sara Tomei
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0257583
Racial and ethnic disparities in HIV diagnoses among heterosexually active persons in the United States nationally and by state, 2018
Cited by: 4
Author(s): Erika G. Martin, Bahareh Ansari, Rachel Hart-Malloy, Dawn K. Smith, Kevin P. Delaney, Thomas L. Gift, Andrés A. Berruti, Monica Trigg, Eli S. Rosenberg
Software Mentions: 1
Published: almost 5 years ago
10.1016/j.dib.2020.106336
Data on draft genome sequence of Caldanaerobacter sp. strain 1523vc, a thermophilic bacterium, isolated from a hot spring of Uzon Caldera, (Kamchatka, Russia)
Cited by: 2
Author(s): Aleksei A. Korzhenkov, Stepan V. Toshchakov, Olga A. Podosokorskaya, М. В. Патрушев, Ilya V. Kublanov
Software Mentions: 1
Published: over 5 years ago
10.3389/fimmu.2021.738123
Characterising the Phenotypic Diversity of Antigen-Specific Memory B Cells Before and After Vaccination
Cited by: 6
Author(s): M. Christian Tjiam, Sonia Fernández, Martyn A. French
Software Mentions: 1
Published: almost 5 years ago
10.7554/eLife.38594
Privatisation rescues function following loss of cooperation
Cited by: 21
Author(s): Sandra Breum Andersen, Melanie Ghoul, Rasmus Lykke Marvig, Zhuo‐Bin Lee, Søren Molin, Helle Krogh Johansen, Ashleigh S. Griffin
Software Mentions: 1
Published: over 7 years ago
10.1016/j.dib.2021.106759
Application of one-, three-, and seven-day forecasts during early onset on the COVID-19 epidemic dataset using moving average, autoregressive, autoregressive moving average, autoregressive integrated moving average, and naïve forecasting methods
Cited by: 5
Author(s): Christopher J. Lynch, Ross Gore
Software Mentions: 1
Published: over 5 years ago
10.1186/s13104-019-4251-y
Zero-valent iron sand filtration reduces concentrations of virus-like particles and modifies virome community composition in reclaimed water used for agricultural irrigation
Cited by: 13
Author(s): Jessica Chopyk, Prachi Kulkarni, Daniel J. Nasko, Rhodel Bradshaw, Kalmia E. Kniel, Pei C. Chiu, Manan Sharma, Amy R. Sapkota
Software Mentions: 1
Published: over 7 years ago
10.7554/eLife.59614
Ubiquitin-dependent regulation of a conserved DMRT protein controls sexually dimorphic synaptic connectivity and behavior
Cited by: 15
Author(s): Emily A. Bayer, Rebecca C. Stecky, Lauren B. Neal, Phinikoula S. Katsamba, Göran Ahlsén, Vishnu Balaji, Thorsten Hoppe, Lawrence Shapiro, Meital Oren‐Suissa, Oliver Hobert
Software Mentions: 1
Published: almost 6 years ago
10.3389/fimmu.2019.00783
PD-1 Dynamically Regulates Inflammation and Development of Brain-Resident Memory CD8 T Cells During Persistent Viral Encephalitis
Cited by: 31
Author(s): .. Shwetank, Elizabeth Frost, Taryn E Mockus, Heather M. Ren, Mesut Toprak, Matthew D Lauver, Colleen S. Netherby, Ge Jin, Jennifer M. Cosby, Brian D Evavold, Aron E. Lukacher
Software Mentions: 1
Published: over 7 years ago
10.1016/j.dib.2019.103757
Data on draft genome sequence of Bacillus sp. strain VKPM B-3276 isolated from Culex pipiens larvae
Cited by: 3
Author(s): V.V. Zinina, Aleksei A. Korzhenkov, A.V. Tepliuk, A.A. Kanikovskaja, М. В. Патрушев, Ilya V. Kublanov, Stepan V. Toshchakov
Software Mentions: 1
Published: about 7 years ago
10.3389/fimmu.2019.02547
Phenotypic Analysis of Human Lymph Nodes in Subjects With New-Onset Type 1 Diabetes and Healthy Individuals by Flow Cytometry
Cited by: 7
Author(s): Jennie H.M. Yang, Leena Khatri, Marius Mickunas, Evangelia Williams, Danijela Tatović, Mohammad Alhadj Ali, Philippa Young, Penelope Moyle, Vishal Sahni, Ryan Wang, Rejbinder Kaur, Gillian M. Tannahill, Andrew R Beaton, Daniëlle M. Gerlag, Caroline . S. Savage, Antonella Napolitano Rosen, Frank Waldron‐Lynch, Colin Dayan, Timothy Tree
Software Mentions: 1
Published: almost 7 years ago
10.3389/fimmu.2017.01744
Efficacy Testing of H56 cDNA Tattoo Immunization against Tuberculosis in a Mouse Model
Cited by: 5
Author(s): Anouk C.M. Platteel, Natalie E. Nieuwenhuizen, Teresa Domaszewska, Stefanie Schürer, Ulrike Zedler, Volker Brinkmann, Alice J.A.M. Sijts, Stefan H. E. Kaufmann
Software Mentions: 1
Published: over 8 years ago