Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: about 1 year ago
4,921 dependent packages
2,865,232 downloads last month

Papers Mentioning ggplot2 11,441

10.3390/cancers11081129
High Level Expression of MHC-II in HPV+ Head and Neck Cancers Suggests that Tumor Epithelial Cells Serve an Important Role as Accessory Antigen Presenting Cells
Cited by: 17
Author(s): Steven F. Gameiro, Farhad Ghasemi, John W. Barrett, Anthony C. Nichols, Joe S. Mymryk
Software Mentions: 1
Published: over 5 years ago
10.1136/bmjopen-2017-016866
Effect of weekend admission on process of care and clinical outcomes for the management of acute coronary syndromes: a retrospective analysis of three UK centres
Cited by: 13
Author(s): Glen P. Martin, Tim Kinnaird, Matthew Sperrin, Richard Anderson, Amr Gamal, Avais Jabbar, Chun Shing Kwok, Diane Barker, Grant Heatlie, Azfar Zaman, Mamas A. Mamas
Software Mentions: 1
Published: over 7 years ago
10.3389/fpsyt.2021.687487
Every Night and Every Morn: Effect of Variation in CLOCK Gene on Depression Depends on Exposure to Early and Recent Stress
Cited by: 5
Author(s): D. Győrik, Nóra Eszlári, Zsófia Gál, Dóra Török, Dániel Baksa, Zsüliet Kristóf, Sára Sütöri, Péter Petschner, Gabriella Juhász, György Bagdy, Xénia Gonda
Software Mentions: 1
Published: over 3 years ago
10.3389/fpls.2016.00804
Natural Allelic Variations in Highly Polyploidy Saccharum Complex
Cited by: 24
Author(s): Song Jiang, Xiping Yang, Marcio F. R. Resende, Leandro G. Neves, James Todd, Jisen Zhang, Jack C. Comstock, Jianping Wang
Software Mentions: 1
Published: over 8 years ago
10.1186/s13000-018-0750-8
PD1hi cells associate with clusters of proliferating B-cells in marginal zone lymphoma
Cited by: 4
Author(s): Katherine Wickenden, Nadia Nawaz, Sami Mamand, Deevia Kotecha, Amy L. Wilson, Simon D. Wagner, Matthew J. Ahearne
Software Mentions: 1
Published: about 6 years ago
10.1128/mBio.02716-18
The Polar Organizing Protein PopZ Is Fundamental for Proper Cell Division and Segregation of Cellular Content in <i>Magnetospirillum gryphiswaldense</i>
Cited by: 16
Author(s): Daniel Pfeiffer, Mauricio Toro-Nahuelpan, Marc Bramkamp, Jürgen M. Plitzko, Dirk Schüler
Software Mentions: 1
Published: over 5 years ago
10.3389/fpls.2016.01071
Salt Induces Features of a Dormancy-Like State in Seeds of Eutrema (Thellungiella) salsugineum, a Halophytic Relative of Arabidopsis
Cited by: 15
Author(s): Yana Kazachkova, Asif Ali Khan, Tania Acuña, Isabel López‐Díaz, Esther Carrera, Inna Khozin‐Goldberg, Aaron Fait, Simon Barak
Software Mentions: 1
Published: over 8 years ago
10.3389/fpls.2020.00239
Root Skewing-Associated Genes Impact the Spaceflight Response of Arabidopsis thaliana
Cited by: 25
Author(s): Brandon Califar, Natasha Sng, Agata K. Zupanska, Anna‐Lisa Paul, Robert J. Ferl
Software Mentions: 1
Published: over 4 years ago
10.3389/fpls.2020.609600
Regulation of Exocyst Function in Pollen Tube Growth by Phosphorylation of Exocyst Subunit EXO70C2
Cited by: 4
Author(s): Antonietta Saccomanno, Martin Potocký, Přemysl Pejchar, Michal Hála, Hiromasa Shikata, Claus Schwechheimer, Viktor Žárský
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12864-017-3484-1
Diet, gonadal sex, and sex chromosome complement influence white adipose tissue miRNA expression
Cited by: 38
Author(s): Jenny Link, Yehudit Hasin-Brumshtein, Rita M. Cantor, Xuqi Chen, Arthur P. Arnold, Aldons J. Lusis, Karen Reue
Software Mentions: 1
Published: almost 8 years ago
10.1128/mBio.01224-19
Investigation of Genetic Susceptibility to Blastomycosis Reveals Interleukin-6 as a Potential Susceptibility Locus
Cited by: 30
Author(s): Richard M. Merkhofer, Mary O’Neill, Donny Xiong, Nydiaris Hernández-Santos, Hannah E. Dobson, J. Scott Fites, Abigail C. Shockey, Marcel Wuethrich, Caitlin S. Pepperell, Bruce S. Klein
Software Mentions: 1
Published: over 5 years ago
10.1186/s13024-021-00478-9
Functional microRNA targetome undergoes degeneration-induced shift in the retina
Cited by: 10
Author(s): Joshua Chu-Tan, Adrian V. Cioanca, Zhiping Feng, Yvette Wooff, Ulrike Schümann, Riemke Aggio-Bruce, Hardip R. Patel, Matt Rutar, Katherine M. Hannan, Kostya I. Panov, Jan Provis, Riccardo Natoli
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pntd.0006627
Systematic literature review of Rift Valley fever virus seroprevalence in livestock, wildlife and humans in Africa from 1968 to 2016
Cited by: 60
Author(s): M. L. Clark, George M. Warimwe, Antonello Di Nardo, Nicholas A. Lyons, Simon Gubbins
Software Mentions: 1
Published: over 6 years ago
10.1155/2017/5724046
Differential Regulation of Cardiac Function and Intracardiac Cytokines by Rapamycin in Healthy and Diabetic Rats
Cited by: 21
Author(s): Christian Lück, Vincent G. DeMarco, Abuzar Mahmood, Madhavi P. Gavini, Lakshmi Pulakat
Software Mentions: 1
Published: almost 8 years ago
10.3389/fpls.2020.00601
Soil Sickness in Aged Tea Plantation Is Associated With a Shift in Microbial Communities as a Result of Plant Polyphenol Accumulation in the Tea Gardens
Cited by: 47
Author(s): Yasir Arafat, Israr Ud Din, Muhammad Tayyab, Yuhang Jiang, Ting Cui, Zhaoying Cai, Hao Zhao, Xiangmin Lin, Wenxiong Lin, Shan Lin
Software Mentions: 1
Published: over 4 years ago
10.1128/mBio.01678-19
A Protein Antagonist of Activation-Induced Cytidine Deaminase Encoded by a Complex Mouse Retrovirus
Cited by: 8
Author(s): Gurvani B. Singh, Hyewon Byun, Almas F. Ali, Frank Medina, Dennis Wylie, Haridha Shivram, Andrea K. Nash, Mary M. Lozano, Jaquelin P. Dudley
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0222610
Cardiac resynchronization therapy-heart failure (CRT-HF) clinic: A novel model of care
Cited by: 18
Author(s): Eiran Z. Gorodeski, Christina Magnelli-Reyes, Laurie Ann Moennich, Adam Grimaldi, John Rickard
Software Mentions: 1
Published: about 5 years ago
10.1038/s42003-021-01803-0
smiFISH and embryo segmentation for single-cell multi-gene RNA quantification in arthropods
Cited by: 19
Author(s): Llilians Calvo, Matthew Ronshaugen, Tom Pettini
Software Mentions: 1
Published: over 3 years ago
10.1128/mBio.01516-19
Hydrodynamic Shape Changes Underpin Nuclear Rerouting in Branched Hyphae of an Oomycete Pathogen
Cited by: 5
Author(s): Édouard Evangelisti, Liron Shenhav, T. S. Yunusov, Marie Le Naour—Vernet, Philipp Rink, Sebastián Schornack
Software Mentions: 1
Published: about 5 years ago
10.1128/mBio.02321-19
Identification of Key Determinants of Staphylococcus aureus Vaginal Colonization
Cited by: 28
Author(s): Liwen Deng, Katrin Schilcher, Lindsey R. Burcham, Jakub Kwieciński, Paige Johnson, Steven R. Head, David E. Heinrichs, Alexander R. Horswill, Kelly S. Doran
Software Mentions: 1
Published: almost 5 years ago
10.18632/oncotarget.19926
Mitochondrial genome variation and prostate cancer: a review of the mutational landscape and application to clinical management
Cited by: 25
Author(s): Anton M.F. Kalsbeek, Eva Chan, Niall M. Corcoran, Christopher M. Hovens, Vanessa M. Hayes
Software Mentions: 1
Published: over 7 years ago
10.18632/oncotarget.18032
Transcriptome analysis reveals a role for the endothelial ANP-GC-A signaling in interfering with pre-metastatic niche formation by solid cancers
Cited by: 3
Author(s): Takashi Nojiri, Miki Arai, Yutaka Suzuki, Motofumi Kumazoe, Takeshi Tokudome, Koichi Miura, Jun Hino, Hiroshi Hosoda, Minoru Miyazato, Meinoshin Okumura, Shinpei Kawaoka, Kenji Kangawa
Software Mentions: 1
Published: over 7 years ago
10.1128/mBio.03243-19
Influenza Virus Infection Induces a Narrow Antibody Response in Children but a Broad Recall Response in Adults
Cited by: 46
Author(s): Philip Meade, Guillermina Kuan, Shirin Strohmeier, Hannah E. Maier, Fatima Amanat, Ángel Balmaseda, Kimihito Ito, Ericka Kirkpatrick, Andres Javier, Lionel Gresh, Raffael Nachbagauer, Aubree Gordon, Florian Krammer
Software Mentions: 1
Published: almost 5 years ago
10.1136/bmjgh-2018-000955
Sources of social support and sexual behaviour advice for young adults in rural South Africa
Cited by: 12
Author(s): Guy Harling, Dumile Gumede, Maryam Shahmanesh, Deenan Pillay, Till Bärnighausen, Frank Tanser
Software Mentions: 1
Published: about 6 years ago
10.1186/s12864-019-6355-0
A ligation-based single-stranded library preparation method to analyze cell-free DNA and synthetic oligos
Cited by: 46
Author(s): Christopher J. Troll, Joshua D. Kapp, Varsha Rao, Kelly M. Harkins, Charles N. Cole, Colin Naughton, Joe P. Morgan, Beth Shapiro, Edward Green
Software Mentions: 1
Published: about 5 years ago
10.3389/fonc.2021.715794
SARS-CoV-2 Viral Load Is Correlated With the Disease Severity and Mortality in Patients With Cancer
Cited by: 2
Author(s): Maha Al-Mozaini, Abu Shadat Mohammod Noman, Jawaher Alotaibi, Mohammad Rezaul Karim, Asm Zahed, A Karim, Khaldoun Alromiah, Shariful Islam
Software Mentions: 1
Published: over 3 years ago
10.1136/bmjgh-2021-005512
Can health information through mobile phones close the divide in health behaviours among the marginalised? An equity analysis of Kilkari in Madhya Pradesh, India
Cited by: 11
Author(s): Diwakar Mohan, Kerry Scott, Neha Shah, Jean Juste Harrisson Bashingwa, Arpita Chakraborty, Osama Ummer, Anna Godfrey, Priyanka Dutt, Sara Chamberlain, Amnesty LeFevre
Software Mentions: 1
Published: over 3 years ago
10.3389/fonc.2019.01577
Factors Influencing Delivery of Cancer Survivorship Care Plans: A National Patterns of Care Study
Cited by: 6
Author(s): Joseph L. Benci, Carolyn Vachani, Margaret K. Hampshire, Christina Bach, Karen Arnold‐Korzeniowski, James M. Metz, Christine Hill‐Kayser
Software Mentions: 1
Published: almost 5 years ago
10.1038/s42003-020-1052-8
SAMHD1 is a key regulator of the lineage-specific response of acute lymphoblastic leukaemias to nelarabine
Cited by: 20
Author(s): Tamara Rothenburger, Katie-May McLaughlin, Tobias Herold, C. Schneider, Thomas Oellerich, Florian Rothweiler, Andrew Feber, Tim R. Fenton, Mark N. Wass, Oliver T. Keppler, Martin Michaelis, Jindrich Cinatl
Software Mentions: 1
Published: over 4 years ago
10.1002/1878-0261.12605
ZNF281/Zfp281 is a target of miR‐1 and counteracts muscle differentiation
Cited by: 12
Author(s): Sara Nicolai, Marco Pieraccioli, Artem Smirnov, Consuelo Pitolli, Lucia Anemona, Alessandro Mauriello, Eleonora Candi, Margherita Annicchiarico-Petruzzelli, Yufang Shi, Ying Wang, Gerry Melino, Giuseppe Raschellà
Software Mentions: 1
Published: almost 5 years ago
10.1038/s42003-021-02609-w
Phylogeographic reconstruction of the marbled crayfish origin
Cited by: 6
Author(s): Julian Gutekunst, Olena Maiakovska, Katharina Hanna, Panagiotis Provataris, Hannes Horn, Stephan Wolf, Christopher E. Skelton, Nathan J. Dorn, Frank Lyko
Software Mentions: 1
Published: about 3 years ago
10.1136/bmjgh-2019-002187
Patient pathways of tuberculosis care-seeking and treatment: an individual-level analysis of National Health Insurance data in Taiwan
Cited by: 10
Author(s): Chu-Chang Ku, Chien‐Chou Chen, Simon Dixon, Hsien Ho Lin, Peter J. Dodd
Software Mentions: 1
Published: over 4 years ago
10.3389/fonc.2021.665388
Comprehensive Analysis of GLUT1 Immune Infiltrates and ceRNA Network in Human Esophageal Carcinoma
Cited by: 20
Author(s): Xusheng Liu, Yan Gao, Libing Wu, Huabing Wan, Yan Peng, Jin Yang, Shikong Guo, Yalan Wang, Xueqin Chen, Lu-Meng Zhou, Jian-Wei Yang, Xue-Yan Kui, Xiaoyu Liu, Zhijun Pei
Software Mentions: 1
Published: over 3 years ago
10.1111/omi.12323
Modified SHI medium supports growth of a disease‐state subgingival polymicrobial community in vitro
Cited by: 8
Author(s): Eleanor I. Lamont, Archita Gadkari, Kristopher A. Kerns, Thao T. To, Diane M. Daubert, Georgios A. Kotsakis, Batbileg Bor, Xuesong He, Jeffrey S. McLean
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12864-016-3081-8
Exome genotyping, linkage disequilibrium and population structure in loblolly pine (Pinus taeda L.)
Cited by: 43
Author(s): Mi Lu, Konstantin V. Krutovsky, C. Dana Nelson, Tomasz E. Koralewski, Thomas D. Byram, Carol A. Loopstra
Software Mentions: 1
Published: about 8 years ago
10.1136/bmjgh-2019-001755
The inverse relationship between national food security and annual cholera incidence: a 30-country analysis
Cited by: 8
Author(s): Aaron Richterman, Andrew S. Azman, Georgery Constant, Louise C Ivers
Software Mentions: 1
Published: over 5 years ago
10.1186/s13000-015-0383-0
On the representation of cells in bone marrow pathology by a scalar field: propagation through serial sections, co-localization and spatial interaction analysis
Cited by: 3
Author(s): Cleo–Aron Weis, Benedict Walter Grießmann, Christoph Scharff, Caecilia Detzner, Eva Doreen Pfister, Alexander Marx, Frank G. Zoellner
Software Mentions: 1
Published: over 9 years ago
10.1186/s13000-021-01102-6
Chronic cholestasis detection by a novel tool: automated analysis of cytokeratin 7-stained liver specimens
Cited by: 6
Author(s): Nelli Sjöblom, Sonja Boyd, Anniina Manninen, Anna Knuuttila, Sami Blom, Martti Färkkilä, Johanna Arola
Software Mentions: 1
Published: over 3 years ago
10.7554/eLife.65420
A common 1.6 mb Y-chromosomal inversion predisposes to subsequent deletions and severe spermatogenic failure in humans
Cited by: 14
Author(s): Pille Hallast, Laura Kibena, Margus Punab, Elena Arciero, Siiri Rootsi, Marina Grigorova, Rodrigo Flores, Mark A. Jobling, Olev Poolamets, Kristjan Pomm, Paul Korrovits, Kristiina Rull, Yali Xue, Chris Tyler‐Smith, Maris Laan
Software Mentions: 1
Published: over 3 years ago
10.1111/jfd.13361
Effect of water temperature on the morbidity of <i>Tetracapsuloides bryosalmonae</i> (Myxozoa) to brown trout (<i>Salmo trutta</i>) under laboratory conditions
Cited by: 7
Author(s): Karoline Waldner, Martin Borkovec, Florian Borgwardt, Günther Unfer, Mansour El-Matbouli
Software Mentions: 1
Published: almost 4 years ago
10.1002/ijc.31063
Histological subtypes of ovarian cancer associated with parity and breastfeeding in the prospective Million Women Study
Cited by: 44
Author(s): Kezia Gaitskell, Jane Green, Kirstin Pirie, Isobel Barnes, C Hermon, Gillian Reeves, Valerie Beral
Software Mentions: 1
Published: about 7 years ago
10.3389/fonc.2021.671047
Association of the 12-Gene Breast DCIS Score® Assay With Local Recurrence in Patients With Ductal Carcinoma In Situ Treated on Accelerated Partial Breast Radiotherapy Protocols
Cited by: 0
Author(s): Charles E. Leonard, Shannon Tole, Michelle Turner, John P. Bennett, Kathryn Howell, Dennis L. Carter
Software Mentions: 1
Published: over 3 years ago
10.1007/s10554-015-0659-1
Defining the real-world reproducibility of visual grading of left ventricular function and visual estimation of left ventricular ejection fraction: impact of image quality, experience and accreditation
Cited by: 55
Author(s): Graham D. Cole, Niti M. Dhutia, Matthew Shun-Shin, Keith Willson, James Harrison, Claire E. Raphael, Massoud Zolgharni, Jamil Mayet, Dárrel P. Francis
Software Mentions: 1
Published: over 9 years ago
10.1155/2019/9151394
Inhibition of TGF-<i>β</i>1 Signaling by IL-15: A Novel Role for IL-15 in the Control of Renal Epithelial-Mesenchymal Transition: IL-15 Counteracts TGF-<i>β</i>1-Induced EMT in Renal Fibrosis
Cited by: 16
Author(s): Aurore Devocelle, Lola Lecru, H. François, Christophe Desterke, Cindy Gallerne, Pierre Eid, Estelle Oberlin, Bruno Azzarone, Julien Giron‐Michel
Software Mentions: 1
Published: over 5 years ago
10.5005/jp-journals-10005-1470
Conscious Sedation with Nitrous Oxide to control Stress during Dental Treatment in Patients with Cerebral Palsy: An Experimental Clinical Trial
Cited by: 7
Author(s): Fernando Martins Baeder, Daniel F. Silva, Ana Cl de Albuquerque, Maria Tbr Santos
Software Mentions: 1
Published: almost 8 years ago
10.1136/bmj.h4708
Frequency of discrepancies in retracted clinical trial reports versus unretracted reports: blinded case-control study
Cited by: 9
Author(s): Graham D. Cole, Alexandra N. Nowbar, Michael Mielewczik, Matthew Shun-Shin, Dárrel P. Francis
Software Mentions: 1
Published: about 9 years ago
10.1111/mpp.12900
Single gene enables plant pathogenic <i>Pectobacterium</i> to overcome host‐specific chemical defence
Cited by: 18
Author(s): Tijs J. M. van den Bosch, Outi Niemi, Cornelia U. Welte
Software Mentions: 1
Published: almost 5 years ago
10.3389/fonc.2021.674731
Lung Function After Stereotactic Body Radiation Therapy for Early-Stage Non-Small Cell Lung Cancer, Changes and Predictive Markers
Cited by: 7
Author(s): Janna Berg, Christina Ramberg, Jon Olav Sulheim Haugstvedt, May‐Bente Bengtson, Anne-Marie Gabrielsen, Odd Terje Brustugun, Ann Rita Halvorsen, Åslaug Helland
Software Mentions: 1
Published: over 3 years ago
10.3389/fonc.2021.608641
Correlation Between Prognostic Biomarker SLC1A5 and Immune Infiltrates in Various Types of Cancers Including Hepatocellular Carcinoma
Cited by: 17
Author(s): Junsheng Zhao, Zhongli Yang, Mingmin Tu, Meng Wang, Hainv Gao, Ming D. Li, Lanjuan Li
Software Mentions: 1
Published: over 3 years ago
10.1186/s13047-015-0074-9
Let me Google that for you: a time series analysis of seasonality in internet search trends for terms related to foot and ankle pain
Cited by: 37
Author(s): Scott Telfer, James Woodburn
Software Mentions: 1
Published: over 9 years ago
10.3389/fonc.2019.00575
Impact of Taxanes, Endocrine Therapy, and Deleterious Germline BRCA Mutations on Anti-müllerian Hormone Levels in Early Breast Cancer Patients Treated With Anthracycline- and Cyclophosphamide-Based Chemotherapy
Cited by: 38
Author(s): Matteo Lambertini, Nathalie Olympios, Justine Lequesne, Céline Calbrix, Maxime Fontanilles, Agnès Loeb, Marianne Leheurteur, Isabelle Demeestere, Frédéric Di Fiore, A. Perdrix, Florian Clatot
Software Mentions: 1
Published: over 5 years ago
10.15252/msb.20209469
Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder
Cited by: 66
Author(s): Lovisa Stenström, Diana Mahdessian, Christian Gnann, Anthony J. Cesnik, Wei Ouyang, Manuel D. Leonetti, Mathias Uhlén, Sara Cuylen-Haering, Peter Thul, Emma Lundberg
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0170658
Using spatio-temporal surveillance data to test the infectious environment of children before type 1 diabetes diagnosis
Cited by: 6
Author(s): Pierre Bougnères, Sophie Le Fur, Sophie Valtat, Yoichiro Kamatani, Mark Lathrop, Alain‐Jacques Valleron
Software Mentions: 1
Published: almost 8 years ago
10.1007/s00125-018-4680-5
Magnesium deficiency prevents high-fat-diet-induced obesity in mice
Cited by: 14
Author(s): Steef Kurstjens, Janna A. van Diepen, Caro Bos, Wynand Alkema, René J. M. Bindels, Frances M. Ashcroft, Cees J. Tack, Joost G. J. Hoenderop, Jeroen H. F. de Baaij
Software Mentions: 1
Published: over 6 years ago
10.3390/jof6040227
Hmg1 Gene Mutation Prevalence in Triazole-Resistant Aspergillus fumigatus Clinical Isolates
Cited by: 10
Author(s): Agustin Reséndiz-Sharpe, Margriet W.J. Hokken, Toine Mercier, Rita Merckx, Kamiel Verhagen, Lisa Dewitte, Willem J. G. Melchers, Paul E. Verweij, Johan Maertens, Katrien Lagrou
Software Mentions: 1
Published: about 4 years ago
10.3389/fonc.2021.626605
Transcriptome Analysis of Ivosidenib-Mediated Inhibitory Functions on Non-Small Cell Lung Cancer
Cited by: 1
Author(s): Juan Wu, Ru Chen, Huiqing Shen, Ting Yan, Yu Qian, Yaping Zhang, Zhuo-Ya Huang, Ping Kong, Min Pang, Xinri Zhang
Software Mentions: 1
Published: over 3 years ago
10.1016/j.omtn.2021.04.019
Construction of a Myc-associated ceRNA network reveals a prognostic signature in hepatocellular carcinoma
Cited by: 10
Author(s): Dandan Zhang, Yi Shi, Ji‐Bin Liu, Xiaoli Yang, Rui Xin, Huimin Wang, Pei‐Yao Wang, Chengyou Jia, Wenjie Zhang, Yu‐Shui Ma, Da Fu
Software Mentions: 1
Published: over 3 years ago
10.3390/jof6040368
Investigating the Smuts: Common Cues, Signaling Pathways, and the Role of MAT in Dimorphic Switching and Pathogenesis
Cited by: 13
Author(s): Teeratas Kijpornyongpan, M. Catherine Aime
Software Mentions: 1
Published: almost 4 years ago
10.1155/2020/3589497
Picroside II Improves Severe Acute Pancreatitis-Induced Intestinal Barrier Injury by Inactivating Oxidative and Inflammatory TLR4-Dependent PI3K/AKT/NF-<i>κ</i>B Signaling and Improving Gut Microbiota
Cited by: 25
Author(s): Xuehua Piao, Baohai Liu, Xiaodan Sui, Shuangdi Li, Wei Niu, Qingyu Zhang, Xuan Song, Shusheng Cai, Yuxin Fan
Software Mentions: 1
Published: over 4 years ago
10.1186/s12917-020-2273-2
TeamMate: a longitudinal study of New Zealand working farm dogs. I. Methods, population characteristics and health on enrolment
Cited by: 4
Author(s): Katja Elisabeth Isaksen, Lori Linney, Helen Williamson, Nick Cave, Ngaio J. Beausoleil, Norman Espinosa, Naomi Cogger
Software Mentions: 1
Published: almost 5 years ago
10.3390/jof7040292
Triazole-Resistance in Environmental Aspergillus fumigatus in Latin American and African Countries
Cited by: 12
Author(s): Agustin Reséndiz-Sharpe, Klaas Dewaele, Rita Merckx, Beatriz Bustamante, Maria Celeste Vega-Gomez, Míriam Rolón, Jan Jacobs, Paul E. Verweij, Johan Maertens, Katrien Lagrou
Software Mentions: 1
Published: over 3 years ago
10.1016/j.omto.2020.09.003
Exploring the Role of TRIP-Brs in Human Breast Cancer: An Investigation of Expression, Clinicopathological Significance, and Prognosis
Cited by: 5
Author(s): Raj Kumar Mongre, Chandra Bhushan Mishra, Samil Jung, Beom Suk Lee, Nguyen Thi Ngoc Quynh, Nguyen Hai Anh, Davaajragal Myagmarjav, Taeyeon Jo, Myeong‐Sok Lee
Software Mentions: 1
Published: about 4 years ago
10.1016/j.omto.2020.12.009
Negative allosteric modulators of metabotropic glutamate receptor 3 target the stem-like phenotype of glioblastoma
Cited by: 2
Author(s): Hans-Georg Wirsching, Manuela Silginer, Elisa Ventura, Will Macnair, Isabel Burghardt, Manfred Claassen, Silvia Gatti, Jürgen Wichmann, Claus Riemer, Hannah Schneider, Michael Weller
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0112572
Metabolomic Analysis Using Ultra-Performance Liquid Chromatography-Quadrupole-Time of Flight Mass Spectrometry (UPLC-Q-TOF MS) Uncovers the Effects of Light Intensity and Temperature under Shading Treatments on the Metabolites in Tea
Cited by: 68
Author(s): Qunfeng Zhang, Yuanzhi Shi, Lei Ma, Xiaoyun Yi, Jianyun Ruan
Software Mentions: 1
Published: about 10 years ago
10.3390/jof7070565
Assessing Genotypic and Environmental Effects on Endophyte Communities of Fraxinus (Ash) Using Culture Dependent and Independent DNA Sequencing
Cited by: 5
Author(s): Anindita Lahiri, Brian R. Murphy, Trevor R. Hodkinson
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0182730
Quantifying immediate and delayed effects of anthelmintic exposure on ecosystem functioning supported by a common dung beetle species
Cited by: 17
Author(s): Paul Manning, Sarah A. Beynon, Owen T. Lewis
Software Mentions: 1
Published: over 7 years ago
10.1007/s00125-019-04980-0
Circulating metabolites in progression to islet autoimmunity and type 1 diabetes
Cited by: 29
Author(s): Santosh Lamichhane, Esko Kemppainen, Kajetan Trošt, Heli Siljander, Heikki Hyöty, Jorma Ilonen, Jorma Toppari, Riitta Veijola, Tuulia Hyötyläinen, Mikael Knip, Matej Orešič
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0137640
Deciphering Seed Sequence Based Off-Target Effects in a Large-Scale RNAi Reporter Screen for E-Cadherin Expression
Cited by: 8
Author(s): Robert A. Adams, Barbara Nicke, Hans‐Dieter Pohlenz, Florian Sohler
Software Mentions: 1
Published: about 9 years ago
10.1186/s12879-019-4093-1
In vitro activities of Eravacycline against 336 isolates collected from 2012 to 2016 from 11 teaching hospitals in China
Cited by: 15
Author(s): Chunjiang Zhao, Xiaojuan Wang, Yawei Zhang, Ruobing Wang, Qi Wang, Henan Li, Hui Wang
Software Mentions: 1
Published: over 5 years ago
10.1242/dev.165068
Hedgehog signaling regulates cell motility and optic fissure and stalk formation during vertebrate eye morphogenesis
Cited by: 31
Author(s): Hannah B. Gordon, Sarah Lusk, Keith R. Carney, Emily O. Wirick, Brooke Froelich Murray, Kristen M. Kwan
Software Mentions: 1
Published: almost 7 years ago
10.1186/s40462-020-00200-2
Living la Vida T-LoCoH: site fidelity of Florida ranched and wild white-tailed deer (Odocoileus virginianus) during the epizootic hemorrhagic disease virus (EHDV) transmission period
Cited by: 3
Author(s): Emily T. N. Dinh, Allison Cauvin, Jeremy P. Orange, Rebecca M. Shuman, Samantha M. Wisely, Jason K. Blackburn
Software Mentions: 1
Published: over 4 years ago
10.3389/fonc.2020.00521
Pharmacogenomic Testing to Guide Personalized Cancer Medicine Decisions in Private Oncology Practice: A Case Study
Cited by: 8
Author(s): George Astras, Christos Papagiannopoulos, Konstantinos Kyritsis, Constantina Markitani, Ioannis S. Vizirianakis
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0156147
Near-Bottom Hypoxia Impacts Dynamics of Bacterioplankton Assemblage throughout Water Column of the Gulf of Finland (Baltic Sea)
Cited by: 8
Author(s): Peeter Laas, Elina Šatova, Inga Lips, Urmas Lips, Jaak Simm, Veljo Kisand, Madis Metsis
Software Mentions: 1
Published: over 8 years ago
10.1186/s12879-015-1072-z
Syphilis in the economic center of South China: results from a real-time, web-based surveillance program
Cited by: 8
Author(s): Wangjian Zhang, Zhicheng Du, Shaokai Tang, Pi Guo, Xingdong Ye
Software Mentions: 1
Published: over 9 years ago
10.1242/dev.181420
Optic cup morphogenesis requires neural crest-mediated basement membrane assembly
Cited by: 40
Author(s): Chase D. Bryan, Macaulie A. Casey, Rebecca L. Pfeiffer, Bryan W. Jones, Kristen M. Kwan
Software Mentions: 1
Published: almost 5 years ago
10.3389/fonc.2020.522332
Integrated Analysis Reveals ENDOU as a Biomarker in Head and Neck Squamous Cell Carcinoma Progression
Cited by: 5
Author(s): Changshui Xu, Yunbin Zhang, Yimin Shen, Yong Shi, Ming Zhang, Liang Zhou
Software Mentions: 1
Published: almost 4 years ago
10.18632/oncotarget.15236
Stat5 deficiency decreases transcriptional heterogeneity and supports emergence of hematopoietic sub-populations
Cited by: 2
Author(s): Zhengqi Wang, Kevin D. Bunting
Software Mentions: 1
Published: almost 8 years ago
10.7717/peerj.11803
Identification of consistent post-translational regulatory triplets related to oncogenic and tumour suppressive modulators in childhood acute lymphoblastic leukemia
Cited by: 0
Author(s): YongKiat Wee, Yining Liu, Min Zhao
Software Mentions: 1
Published: over 3 years ago
10.1186/s12939-020-1131-y
Prolonged health worker strikes in Kenya- perspectives and experiences of frontline health managers and local communities in Kilifi County
Cited by: 39
Author(s): Dennis Waithaka, Nancy Kagwanja, Jacinta Nzinga, Benjamin Tsofa, Hassan Leli, Christine Mataza, Amek Nyaguara, Philip Bejon, Lucy Gilson, Edwine Barasa, Sassy Molyneux
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0256342
Plant strategies for maximizing growth during water stress and subsequent recovery in Solanum melongena L. (eggplant)
Cited by: 13
Author(s): E. F. Delfin, Sarah Tepler Drobnitch, Louise H. Comas
Software Mentions: 1
Published: over 3 years ago
10.1155/2020/1805418
An Integrated Fecal Microbiome and Metabolomics in T2DM Rats Reveal Antidiabetes Effects from Host-Microbial Metabolic Axis of EtOAc Extract from <i>Sophora flavescens</i>
Cited by: 29
Author(s): Jing Shao, Yi Liu, Huan Wang, Yun Luo, Lei Chen
Software Mentions: 1
Published: over 4 years ago
10.3389/fonc.2020.00887
Preoperative Prediction Power of Imaging Methods for Microvascular Invasion in Hepatocellular Carcinoma: A Systemic Review and Meta-Analysis
Cited by: 23
Author(s): Jiacheng Huang, Wuwei Tian, Lele Zhang, Qiang Huang, Shigang Lin, Yong Ding, Wenjie Liang, Shusen Zheng
Software Mentions: 1
Published: over 4 years ago
10.18632/oncotarget.11392
Association mining of mutated cancer genes in different clinical stages across 11 cancer types
Cited by: 9
Author(s): Wangxiong Hu, Xiaofen Li, Tingzhang Wang, Shu Zheng
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0146104
Statistical Evaluation of HTS Assays for Enzymatic Hydrolysis of β-Keto Esters
Cited by: 11
Author(s): O. Buß, Sven Jäger, Sarah‐Marie Dold, Sarah C. Zimmermann, Kay Hamacher, Katja Schmitz, Jens Rudat
Software Mentions: 1
Published: almost 9 years ago
10.1242/dev.167031
Basal epithelial tissue folding is mediated by differential regulation of microtubules
Cited by: 4
Author(s): Mike R Visetsouk, Elizabeth J. Falat, Ryan J. Garde, Jennifer Wendlick, Jennifer H. Gutzman
Software Mentions: 1
Published: almost 7 years ago
10.7717/peerj.10155
Conflicting phylogenetic signals in plastomes of the tribe Laureae (Lauraceae)
Cited by: 23
Author(s): Tian‐Wen Xiao, Yong Xu, Lu Jin, Tong-Jian Liu, Hai‐Fei Yan, Xue‐Jun Ge
Software Mentions: 1
Published: about 4 years ago
10.7717/peerj.10476
Determinants of behavioural and biological risk factors for cardiovascular diseases from state level STEPS survey (2017–19) in Madhya Pradesh
Cited by: 2
Author(s): Arun Kokane, Rajnish Joshi, Ashwin Kotnis, Anirban Chatterjee, Krishna Kumar Yadav, G Revadi, Ankur Joshi, Abhijit Pakhare
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0174534
The microRNA repertoire of Tibetan naked carp Gymnocypris przewalskii: A case study in Schizothoracinae fish on the Tibetan Plateau
Cited by: 15
Author(s): Chao Tong, Fei Tian, Cunfang Zhang, Kai Zhao
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pntd.0007874
Immune responses to O-specific polysaccharide (OSP) in North American adults infected with Vibrio cholerae O1 Inaba
Cited by: 11
Author(s): Md. Imam Hossain, Kamrul Islam, Meagan Kelly, Leslie M. Smith, Richelle C. Charles, Ana A. Weil, Taufiqur Rahman Bhuiyan, Pavol Kòváč, Peng Xu, Stephen B. Calderwood, Jakub K. Simon, Wilbur H. Chen, Michael Lock, Caroline E. Lyon, Beth D. Kirkpatrick, Mitchell B. Cohen, Myron M. Levine, Marc Gurwith, Daniel T. Leung, Andrew S. Azman, Jason B. Harris, Firdausi Qadri, Edward T. Ryan
Software Mentions: 1
Published: about 5 years ago
10.1186/s10194-019-1035-7
Identifying menstrual migraine– improving the diagnostic criteria using a statistical method
Cited by: 13
Author(s): Mathias Barra, Fredrik A. Dahl, Anne MacGregor, Kjersti Grøtta Vetvik
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0192277
Distribution of triclosan-resistant genes in major pathogenic microorganisms revealed by metagenome and genome-wide analysis
Cited by: 14
Author(s): Raees Khan, Nazish Roy, Kihyuck Choi, Seon-Woo Lee
Software Mentions: 1
Published: almost 7 years ago
10.1186/1471-2334-14-460
The frequency of tetracycline resistance genes co-detected with respiratory pathogens: a database mining study uncovering descriptive trends throughout the United States
Cited by: 1
Author(s): Matthew Huff, David Weisman, John S. Adams, Song Li, Jessica Green, Leslie Malone, Scott Clemmons
Software Mentions: 1
Published: over 10 years ago
10.7717/peerj.7341
Epidemiological analysis of respiratory and intestinal infectious diseases in three counties of Sichuan: the baseline survey of Disaster Mitigation Demonstration Area in western China
Cited by: 3
Author(s): Zhiqiang Xue, Zongrui Yang, Huanhuan Sun, Ren JingHuan, Mengzi Sun, Jiagen Li, Anning Zhang, Pingping Zheng, Pan Pan, Jing Dou, Li Shen, Chen Yang, Kexin Li, Tianyu Feng, Yaogai Lv, Chunli Bi, Lina Jin, Zhe Wang, Yan Yao
Software Mentions: 1
Published: over 5 years ago
10.1186/s12879-018-3248-9
Prevalence of human anelloviruses in Romanian healthy subjects and patients with common pathologies
Cited by: 22
Author(s): Sonia Spandole-Dinu, Dănuţ Cimponeriu, Anne-Marie Crăciun, I Radu, Silvia Nica, Mihai Toma, Oana Andrada Alexiu, Corneliu Sorin Iorga, Lavinia-Mariana Berca, Remus Nica
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.11791
Associations of individual and joint expressions of ERCC6 and ERCC8 with clinicopathological parameters and prognosis of gastric cancer
Cited by: 2
Author(s): Jing Chen, Liang Li, Liping Sun, Yuan Yuan, Jingjing Jing
Software Mentions: 1
Published: over 3 years ago
10.3390/ijms20174216
Phenotype-Specific Therapeutic Effect of Rhodiola wallichiana var. cholaensis Combined with Dexamethasone on Experimental Murine Asthma and Its Comprehensive Pharmacological Mechanism
Cited by: 7
Author(s): Zhiqiang Pang, Nan Ran, Yuze Yuan, Cuizhu Wang, Guoqiang Wang, Hongqiang Lin, Alan Hsu, Jinping Liu, Fang Wang
Software Mentions: 1
Published: over 5 years ago
10.1155/2012/542727
Rapamycin Augments the NMDA-Mediated TNF Suppression of MRSA-Stimulated RAW264.7 Murine Macrophages
Cited by: 3
Author(s): Thomas Spentzas, Rebekah Shappley, Fabio Savorgnan, Elizabeth Meals, B. Keith English
Software Mentions: 1
Published: almost 13 years ago
10.3390/ijms20174168
Wnt Binding Affinity Prediction for Putative Frizzled-Type Cysteine-Rich Domains
Cited by: 13
Author(s): Mark Agostino, Sebastian Pöhl
Software Mentions: 1
Published: over 5 years ago
10.1038/s41421-020-00223-4
Integrated decoding hematopoiesis and leukemogenesis using single-cell sequencing and its medical implication
Cited by: 22
Author(s): Pengfei Qin, Yakun Pang, Wenhong Hou, Ruiqing Fu, Yingchi Zhang, Xuefei Wang, Guofeng Meng, Qifa Liu, Xiaofan Zhu, Ni Hong, Tao Cheng, Wenfei Jin
Software Mentions: 1
Published: almost 4 years ago
10.7717/peerj.858
Capsules of the diatom<i>Achnanthidium minutissimum</i>arise from fibrillar precursors and foster attachment of bacteria
Cited by: 11
Author(s): Katrin Leinweber, Peter G. Kroth
Software Mentions: 1
Published: over 9 years ago