cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1038/s41598-017-07546-5

Clinical metagenomics of bone and joint infections: a proof of concept study
Cited by: 74
Author(s): Étienne Ruppé, Vladimir Lazarević, Myriam Girard, William Mouton, Tristan Ferry, François Laurent, Jacques Schrenzel
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0254031

Anemia design effects in cluster surveys of women and young children in refugee settings
Cited by: 0
Author(s): Erin Hulland, Eva Leidman, Caroline Wilkinson, Mélody Tondeur, Oleg Bilukha
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms22147412

Butyrate Feeding Reverses CypD-Related Mitoflash Phenotypes in Mouse Myofibers
Cited by: 5
Author(s): Ang Li, Xuejun Li, Jianxun Yi, Jianjie Ma, Jingsong Zhou
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-017-09503-8

BIRC3 is a biomarker of mesenchymal habitat of glioblastoma, and a mediator of survival adaptation in hypoxia-driven glioblastoma habitats
Cited by: 20
Author(s): Dapeng Wang, Anders Berglund, Rajappa S. Kenchappa, Robert J.B. Macaulay, James J. Mulé, Arnold B. Etame
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-11095-2

N-P Fertilization Stimulates Anaerobic Selenium Reduction in an End-Pit Lake
Cited by: 10
Author(s): Andreas Luek, David J. Rowan, Joseph B. Rasmussen
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms22147578

Haplotype Analysis of BADH1 by Next-Generation Sequencing Reveals Association with Salt Tolerance in Rice during Domestication
Cited by: 8
Author(s): Myeong-Hyeon Min, Thant Zin Maung, Cheng Yuan, Rungnapa Phitaktansakul, Gang-Seob Lee, Sang-Ho Chu, Kyu‐Won Kim, Yong‐Jin Park
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-019-44761-8

Relationship between the weights of seed beetles of the genus Megacerus Fåhraeus, 1839 (Coleoptera: Chrysomelidae: Bruchinae) and their host seeds of the family Convolvulaceae
Cited by: 3
Author(s): Azucena Canto, Rosalina Soler Rodríguez, Enrique Reyes‐Novelo
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0049406

A Generic Model to Simulate Air-Borne Diseases as a Function of Crop Architecture
Cited by: 13
Author(s): Pierre Casadebaig, Gauthier Quesnel, Michel Langlais, Robert Faivre
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0149035

Heterologous Expression Screens in Nicotiana benthamiana Identify a Candidate Effector of the Wheat Yellow Rust Pathogen that Associates with Processing Bodies
Cited by: 63
Author(s): Benjamin Pêtre, Diane G. O. Saunders, Jan Sklenář, Cécile Lorrain, Ksenia V. Krasileva, Joe Win, Sébastien Duplessis, Sophien Kamoun
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0178274

Reprimo tissue-specific expression pattern is conserved between zebrafish and human
Cited by: 9
Author(s): Ricardo J. Figueroa, Gonzalo Carrasco-Aviño, Ignacio A. Wichmann, Martin Lange, Gareth I. Owen, Arndt F. Siekmann, Alejandro Corvalán, Juan C. Opazo, Julio D. Amigo
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0053608

Taxonomic Classification of Bacterial 16S rRNA Genes Using Short Sequencing Reads: Evaluation of Effective Study Designs
Cited by: 266
Author(s): Orna Mizrahi-Man, Emily Davenport, Yoav Gilad
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0232770

Colonization of Beauveria bassiana 08F04 in root-zone soil and its biocontrol of cereal cyst nematode (Heterodera filipjevi)
Cited by: 8
Author(s): Jie Zhang, Bo Fu, Qitong Lin, I. T. Riley, Shengli Ding, Linlin Chen, Jiangkuan Cui, Lirong Yang, Honglian Li
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0218943

Stable isotope and dental caries data reveal abrupt changes in subsistence economy in ancient China in response to global climate change
Cited by: 27
Author(s): Christina Cheung, Hua Zhang, Joseph C. Hepburn, Dongya Yang, Michael P. Richards
Software Mentions: 1
Published: over 5 years ago

10.1136/bmjgh-2018-000955

Sources of social support and sexual behaviour advice for young adults in rural South Africa
Cited by: 12
Author(s): Guy Harling, Dumile Gumede, Maryam Shahmanesh, Deenan Pillay, Till Bärnighausen, Frank Tanser
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0081663

Modulation of Malaria Infection in Anopheles gambiae Mosquitoes Exposed to Natural Midgut Bacteria
Cited by: 55
Author(s): Majoline T. Tchioffo, Anne Boissière, Thomas S. Churcher, Luc Abate, Geoffrey Gimonneau, Sandrine E. Nsango, Parfait Awono-Ambene, Richard Christen, Antoine Berry, Isabelle Morlais
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0154457

Complementary Hand Responses Occur in Both Peri- and Extrapersonal Space
Cited by: 3
Author(s): Tim Faber, Michiel van Elk, Kai J. Jonas
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0237818

Genome-wide association study for mammary structure in Canadian Angus cows
Cited by: 7
Author(s): Kajal Devani, Graham Plastow, Karin Orsel, Tiago S. Valente
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0249739

The effects of maturity matched and un-matched opposition on physical performance and spatial exploration behavior during youth basketball matches
Cited by: 7
Author(s): Jorge Arede, Sean P. Cumming, David M. Johnson, Nuno Leite
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-019-46750-3

An intronic variant in the GCKR gene is associated with multiple lipids
Cited by: 28
Author(s): Lilian Fernandes Silva, Jagadish Vangipurapu, Teemu Kuulasmaa, Markku Laakso
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0195433

Effects of different slipping methods on the mortality of sardine, Sardina pilchardus, after purse-seine capture off the Portuguese Southern coast (Algarve)
Cited by: 16
Author(s): Ana Marçalo, Pedro M. Guerreiro, Luís Bentes, Mafalda Rangel, Pedro Monteiro, Frederico Oliveira, Carlos M.L. Afonso, Pedro Pousão-Ferreira, Hugues P. Benoît, Mike Breen, Karim Erzini, Jorge M. S. Gonçalves
Software Mentions: 1
Published: over 6 years ago

10.1136/bmjgh-2021-005512

Can health information through mobile phones close the divide in health behaviours among the marginalised? An equity analysis of Kilkari in Madhya Pradesh, India
Cited by: 11
Author(s): Diwakar Mohan, Kerry Scott, Neha Shah, Jean Juste Harrisson Bashingwa, Arpita Chakraborty, Osama Ummer, Anna Godfrey, Priyanka Dutt, Sara Chamberlain, Amnesty LeFevre
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-019-46808-2

Improved detection of common variants in coronary artery disease and blood pressure using a pleiotropy cFDR method
Cited by: 0
Author(s): Xiangjie Mao, Qiang Zhou, Fei Xu, Pan Gao, Ning Sun, Bo Wang, Qingxin Tang, Yibin Hao, Changqing Sun
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0188085

Steps to achieve quantitative measurements of microRNA using two step droplet digital PCR
Cited by: 26
Author(s): Elizabeth Stein, David L. Duewer, Natalia Farkas, Erica L. Romsos, Lili Wang, Kenneth D. Cole
Software Mentions: 1
Published: about 7 years ago

10.1136/bmjgh-2019-002187

Patient pathways of tuberculosis care-seeking and treatment: an individual-level analysis of National Health Insurance data in Taiwan
Cited by: 10
Author(s): Chu-Chang Ku, Chien‐Chou Chen, Simon Dixon, Hsien Ho Lin, Peter J. Dodd
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-019-47528-3

5-hydroxymethylcytosine Marks Mammalian Origins Acting as a Barrier to Replication
Cited by: 7
Author(s): Terézia Přikrylová, J. H. Robertson, Pier Francesco Ferrucci, Dorota Konorska, Håvard Aanes, Adeel Manaf, Beibei Zhang, Cathrine Broberg Vågbø, Anna Kuśnierczyk, Karin M. Gilljam, Caroline Løvkvam-Køster, Marit Otterlei, John Arne Dahl, Jorrit M. Enserink, Arne Klungland, Adam B. Robertson
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0069202

Genome-Wide Association Mapping for Identification of Quantitative Trait Loci for Rectal Temperature during Heat Stress in Holstein Cattle
Cited by: 86
Author(s): Serdal Dikmen, J.B. Cole, D.J. Null, Peter J. Hansen
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-019-47989-6

Terrestrial locomotion of the Svalbard rock ptarmigan: comparing field and laboratory treadmill studies
Cited by: 5
Author(s): Andres Marmol-Guijarro, Robert L. Nudds, John C. Marrin, Lars P. Folkow, Jonathan R. Codd
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0209431

Evaluating the bio-economic performance of a Callo de hacha (Atrina maura, Atrina tuberculosa & Pinna rugosa) fishery restoration plan in La Paz, Mexico
Cited by: 4
Author(s): Juliano Palacios‐Abrantes, Juliana Herrera-Correal, Salvador Estrada, Jacy Brunkow, Renato Molina
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-019-48152-x

SMARCA2-deficiency confers sensitivity to targeted inhibition of SMARCA4 in esophageal squamous cell carcinoma cell lines
Cited by: 25
Author(s): Katharina Ehrenhöfer-Wölfer, Teresa Puchner, Cornelia Schwarz, Janine Rippka, Silvia Blaha-Ostermann, Ursula Strobl, Alexandra Hörmann, Gerd Bader, Stefan Kornigg, Stephan K. Zahn, Wolfgang Sommergruber, Norbert Schweifer, Thomas Zichner, Andreas Schlattl, Ralph A. Neumüller, Junwei Shi, Christopher R. Vakoc, Manfred Kögl, Mark Petronczki, Norbert Kraut, Mark Pearson, Simon Wöhrle
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-48341-8

The NRON complex controls circadian clock function through regulated PER and CRY nuclear translocation
Cited by: 23
Author(s): Yool Lee, Yang Shen, Lauren J. Francey, Chidambaram Ramanathan, Amita Sehgal, Andrew C. Liu, John B. Hogenesch
Software Mentions: 1
Published: over 5 years ago

10.1186/s12862-018-1249-3

Three new Diplozoidae mitogenomes expose unusual compositional biases within the Monogenea class: implications for phylogenetic studies
Cited by: 25
Author(s): Dong Zhang, Hong Zou, Shan Wu, Ming Li, Ivan Jakovlić, Jin Zhang, Rong Chen, Wen X. Li, Gui T. Wang
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-48400-0

Microridges are apical epithelial projections formed of F-actin networks that organize the glycan layer
Cited by: 29
Author(s): Clyde Savio Pinto, Ameya Khandekar, Rajasekaran Bhavna, Petra Kiesel, Gaia Pigino, Mahendra Sonawane
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0177536

The Global Fund in China: Multidrug-resistant tuberculosis nationwide programmatic scale-up and challenges to transition to full country ownership
Cited by: 17
Author(s): Lixia Wang, Renzhong Li, Cheng Xu, Hui Zhang, Yunzhou Ruan, Ming-Ting Chen, Dongmei Wang, Emilio Dirlikov, Xin Du, Jian Zhao, Yanlin Zhao, Sheng Fen Wang, Yuhong Liu, Liang Li, Dennis Falzon, Yiyuan Sun, Yu Wang, Bernhard Schwärtlander, Fabio Scano
Software Mentions: 1
Published: over 7 years ago

10.1186/s12862-018-1314-y

Two’s company, three’s a crowd: co-occurring pollinators and parasite species in Breynia oblongifolia (Phyllanthaceae)
Cited by: 6
Author(s): Jonathan T. D. Finch, Sally A. Power, Justin A. Welbergen, James M. Cook
Software Mentions: 1
Published: about 6 years ago

10.1136/bmjgh-2019-001755

The inverse relationship between national food security and annual cholera incidence: a 30-country analysis
Cited by: 8
Author(s): Aaron Richterman, Andrew S. Azman, Georgery Constant, Louise C Ivers
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-48706-z

Combining ZooMS and zooarchaeology to study Late Pleistocene hominin behaviour at Fumane (Italy)
Cited by: 39
Author(s): Virginie Sinet‐Mathiot, Geoff Smith, Matteo Romandini, Arndt Wilcke, Marco Peresani, Jean‐Jacques Hublin, Frido Welker
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms22158140

Monitoring Human Milk β-Casein Phosphorylation and O-Glycosylation Over Lactation Reveals Distinct Differences between the Proteome and Endogenous Peptidome
Cited by: 18
Author(s): Kelly A. Dingess, Inge Gazi, Henk W. P. van den Toorn, Marko Mank, Bernd Stahl, Karli R. Reiding, Albert J. R. Heck
Software Mentions: 1
Published: over 3 years ago

10.1136/bmj.h4708

Frequency of discrepancies in retracted clinical trial reports versus unretracted reports: blinded case-control study
Cited by: 9
Author(s): Graham D. Cole, Alexandra N. Nowbar, Michael Mielewczik, Matthew Shun-Shin, Dárrel P. Francis
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-019-49702-z

Evaluation of (−)-epicatechin metabolites as recovery biomarker of dietary flavan-3-ol intake
Cited by: 18
Author(s): Javier I. Ottaviani, Reedmond Y. Fong, Jennifer Kimball, Jodi L. Ensunsa, Nicola Gray, Anna Vogiatzoglou, Abigail Britten, Debora Lucarelli, Robert Luben, Philip B. Grace, Deborah H. Mawson, Amy Tym, Antonia Wierzbicki, A. D. Smith, Nicholas J. Wareham, Nita G. Forouhi, Kay‐Tee Khaw, Hagen Schroeter, Gunter Georg Kuhnle
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-49497-z

The effect of 2′-fucosyllactose on simulated infant gut microbiome and metabolites; a pilot study in comparison to GOS and lactose
Cited by: 58
Author(s): Krista Salli, Heli Anglenius, Johanna Hirvonen, Ashley A. Hibberd, Ilmari Ahonen, Markku Saarinen, Kirsti Tiihonen, Johanna Maukonen, Arthur C. Ouwehand
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0251562

Locomotor illusions are generated by perceptual body-environment organization
Cited by: 1
Author(s): Martin Dobricki, David Weibel, Leonardo Angelini, Elena Mugellini, Fred W. Mast
Software Mentions: 1
Published: over 3 years ago

10.3390/nu13093101

The Orexigenic Force of Olfactory Palatable Food Cues in Rats
Cited by: 8
Author(s): Fiona Peris‐Sampedro, Iris Stoltenborg, Marie V. Le May, Pol Solé-Navais, Roger A.H. Adan, Suzanne L. Dickson
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0196051

Complications and risk management in the use of the reaming-irrigator-aspirator (RIA) system: RIA is a safe and reliable method in harvesting autologous bone graft
Cited by: 27
Author(s): Patrick Haubruck, Julian Ober, Raban Arved Heller, Matthias Miska, Gerhard Schmidmaier, Michael C. Tanner
Software Mentions: 1
Published: over 6 years ago

10.1155/2021/8899274

Proteomic Analysis Revealed the Characteristics of Key Proteins Involved in the Regulation of Inflammatory Response, Leukocyte Transendothelial Migration, Phagocytosis, and Immune Process during Early Lung Blast Injury
Cited by: 4
Author(s): Yunen Liu, Changci Tong, Peifang Cong, Ying Liu, Xiuyun Shi, Lin Shi, Shun Mao, Yan Zhao, Hongxu Jin, Mingxiao Hou
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0211544

Understanding the prevalence of bear part consumption in Cambodia: A comparison of specialised questioning techniques
Cited by: 25
Author(s): Elizabeth Davis, Brian Crudge, Thona Lim, D.A. O'Connor, Vichet Roth, Matt Hunt, Jenny Anne Glikman
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0032146

Human Platelet-Rich Plasma- and Extracellular Matrix-Derived Peptides Promote Impaired Cutaneous Wound Healing In Vivo
Cited by: 56
Author(s): Tatiana N. Demidova-Rice, Lindsey N. Wolf, Jeffry Deckenback, Michael R. Hamblin, Ira M. Herman
Software Mentions: 1
Published: almost 13 years ago

10.1038/s41598-019-50763-3

Investigation of the Guinea fowl and domestic fowl hybrids as potential surrogate hosts for avian cryopreservation programmes
Cited by: 8
Author(s): Mariann Molnár, Bence Lázár, Nikoletta Sztán, Barbara Végi, Árpád Drobnyák, Roland Tóth, Krisztina Liptói, Miklós Marosán, Elen Gócza, Sunil Nandi, Michael J. McGrew, Eszter Patakiné Várkonyi
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0221200

Covariates of diarrhoea among under-five children in India: Are they level dependent?
Cited by: 8
Author(s): Mala Ramanathan, Bevin Vijayan
Software Mentions: 1
Published: over 5 years ago

10.1186/s12917-020-2273-2

TeamMate: a longitudinal study of New Zealand working farm dogs. I. Methods, population characteristics and health on enrolment
Cited by: 4
Author(s): Katja Elisabeth Isaksen, Lori Linney, Helen Williamson, Nick Cave, Ngaio J. Beausoleil, Norman Espinosa, Naomi Cogger
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-019-51240-7

Functional analysis and development of a CRISPR/Cas9 allelic series for a CPR5 ortholog necessary for proper growth of soybean trichomes
Cited by: 21
Author(s): Ben Campbell, Jacob W. Hoyle, Bruna Bucciarelli, Adrian O. Stec, Deborah A. Samac, W. A. Parrott, Robert M. Stupar
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-51612-z

Tracking genome-editing and associated molecular perturbations by SWATH mass spectrometry
Cited by: 9
Author(s): Qifeng Lin, Larry W. L. Low, Adam Lau, Chua Wee Ling Esther, Yuji Matsuoka, Yilong Lian, Antόnia Monteiro, Stephen Tate, Jayantha Gunaratne, Thomas J. Carney
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-51990-4

Functional connectivity of music-induced analgesia in fibromyalgia
Cited by: 17
Author(s): Victor Pando‐Naude, Fernando A. Barrios, Sarael Alcauter, Erick H. Pasaye, Lene Vase, Elvira Brattico, Peter Vuust, Eduardo A. Garza‐Villarreal
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0239492

Evaluation of pooled sample analysis strategy in expediting case detection in areas with emerging outbreaks of COVID-19: A pilot study
Cited by: 15
Author(s): Anirudh Singh, Ram Kumar Nema, Ankur Joshi, Prem Shankar, Shashwati Nema, Arun Raghuwanshi, Chitra Patankar, Bijina J. Mathew, Arti Shrivas, Ritu Pandey, Ranu Tripathi, Debasis Biswas, Sarman Singh
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-019-52473-2

Synergistic Antibacterial Effects of Metallic Nanoparticle Combinations
Cited by: 132
Author(s): Claire Bankier, Mohan Edirisinghe, Yuen-Ki Cheong, Guogang Ren, Elaine Cloutman-Green, Lena Ciric
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-019-6248-2

Promising prospects of nanopore sequencing for algal hologenomics and structural variation discovery
Cited by: 11
Author(s): Thomas Sauvage, William E. Schmidt, Hwan Su Yoon, Valerie J. Paul, Suzanne Fredericq
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-53554-y

Membrane-bound Gaussia luciferase as a tool to track shedding of membrane proteins from the surface of extracellular vesicles
Cited by: 16
Author(s): Mikołaj Zaborowski, Pike See Cheah, Xuan Zhang, Isabella Bushko, Kyungheon Lee, Alessandro Sammarco, Valentina Zappulli, Sybren L. N. Maas, Ryan M. Allen, Purva Rumde, Bence György, Massimo Aufiero, Markus Schweiger, Charles P. Lai, Ralph Weissleder, Hakho Lee, Kasey C. Vickers, Bakhos A. Tannous, Xandra O. Breakefield
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0214013

Zooplankters’ nightmare: The fast and efficient catching basket of larval phantom midges (Diptera: Chaoborus)
Cited by: 11
Author(s): Sebastian Kruppert, Lisa Deussen, Linda C. Weiss, Martin Horstmann, Jonas Wolff, Thomas Kleinteich, Stanislav N. Gorb, Ralph Tollrian
Software Mentions: 1
Published: over 5 years ago

10.3390/nu13082688

Flavonoid-Modifying Capabilities of the Human Gut Microbiome—An In Silico Study
Cited by: 17
Author(s): Tobias Goris, Rafael R. C. Cuadrat, Annett Braune
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0187933

Relationship between fine particulate matter, weather condition and daily non-accidental mortality in Shanghai, China: A Bayesian approach
Cited by: 22
Author(s): Xin Fang, Bo Fang, Chunfang Wang, Tian Xia, Matteo Bottai, Fang Fang, Yang Cao
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-019-53853-4

Geography is essential for reproductive isolation between florally diversified morning glory species from Amazon canga savannahs
Cited by: 2
Author(s): Elena Babiychuk, Juliana Galaschi Teixeira, Lourival Tyski, José Tasso Felix Guimarães, Luiza Araújo Romeiro, Edilson Freitas da Silva, Jorge Filipe dos Santos, Santelmo Vasconcelos, Delmo Fonseca da Silva, Alexandre Castilho, José Oswaldo Siqueira, Vera Lúcia Imperatriz-Fonseca, Sergeï Kushnir
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-54968-4

Vocal individuality of Holstein-Friesian cattle is maintained across putatively positive and negative farming contexts
Cited by: 23
Author(s): Alexandra Green, Cameron Clark, Livio Favaro, Sabrina Lomax, David Reby
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-019-55026-9

Improved Visualization of the Necrotic Zone after Microwave Ablation Using Computed Tomography Volume Perfusion in an In Vivo Porcine Model
Cited by: 5
Author(s): Keno K. Bressem, Janis L. Vahldiek, Christoph Erxleben, Seyd Shnayien, Franz Poch, Beatrice Geyer, Kai S. Lehmann, Bernd Hamm, Stefan M. Niehues
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12864-020-07170-0

A multi-breed GWAS for morphometric traits in four Beninese indigenous cattle breeds reveals loci associated with conformation, carcass and adaptive traits
Cited by: 20
Author(s): Sèyi Fridaïus Ulrich Vanvanhossou, Carsten Scheper, Luc Hippolyte Dossa, Tongming Yin, Kerstin Brügemann, Sven König
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0239613

Associations between individual variations in visual attention at 9 months and behavioral competencies at 18 months in rural Malawi
Cited by: 3
Author(s): Juha Pyykkö, Per Ashorn, Eletina Chilora, Kenneth Maleta, Per Ashorn, Jukka Leppänen
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0236489

Incubating parents serve as visual cues to predators in Kentish plover (Charadrius alexandrinus)
Cited by: 6
Author(s): Noémie Engel, Zsolt Végvári, Romy Rice, Vojtěch Kubelka, Tamás Székely
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-019-55574-0

Spatially Adjusted Time-varying Reproductive Numbers: Understanding the Geographical Expansion of Urban Dengue Outbreaks
Cited by: 19
Author(s): Ta-Chou Ng, Tzai‐Hung Wen
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-019-55825-0

Supplementation of live yeast based feed additive in early life promotes rumen microbial colonization and fibrolytic potential in lambs
Cited by: 25
Author(s): Frédérique Chaucheyras‐Durand, Aurélie Ameilbonne, Pauline Auffret, Mickaël Bernard, Marie-Madeleine Mialon, Lysiane Dunière, Evelyne Forano
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-019-55644-3

High Levels of Oxidative Stress and Skin Microbiome are Critical for Initiation and Development of Chronic Wounds in Diabetic Mice
Cited by: 41
Author(s): Jane H. Kim, Benjamin Yang, Amanda Tedesco, Elyson Gavin D. Lebig, Paul Ruegger, Karen Xu, James Borneman, Manuela Martins‐Green
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-019-55464-5

Insight into the biology of Mycobacterium mucogenicum and Mycobacterium neoaurum clade members
Cited by: 11
Author(s): Phani Rama Krishna Behra, B. M. Fredrik Pettersson, Malavika Ramesh, Santanu Dasgupta, Leif A. Kirsebom
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-019-55741-3

Sensitivity and specificity of metatranscriptomics as an arbovirus surveillance tool
Cited by: 23
Author(s): Jana Batovska, Peter T Mee, Stacey E. Lynch, Tim Sawbridge, Brendan Rodoni
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-82472-1

Neuroendocrine prostate cancer has distinctive, non-prostatic HOX code that is represented by the loss of HOXB13 expression
Cited by: 9
Author(s): Siyuan Cheng, Shu Yang, Yunfan Shi, Runhua Shi, Yunshin Yeh, Xiuping Yu
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-82295-0

Lsr2, a nucleoid-associated protein influencing mycobacterial cell cycle
Cited by: 14
Author(s): Marta Kołodziej, Damian Trojanowski, Katarzyna Bury, Joanna Hołówka, Weronika Matysik, Hanna Kąkolewska, Helge Feddersen, Giacomo Giacomelli, Igor Konieczny, Marc Bramkamp, Jolanta Zakrzewska‐Czerwińska
Software Mentions: 1
Published: almost 4 years ago

10.1523/ENEURO.0076-20.2020

diceCT: A Valuable Technique to Study the Nervous System of Fish
Cited by: 13
Author(s): Victoria Camilieri-Asch, Jeremy Shaw, Andrew Mehnert, Kara E. Yopak, Julian C. Partridge, Shaun P. Collin
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0088419

Bayesian Model Comparison and Parameter Inference in Systems Biology Using Nested Sampling
Cited by: 38
Author(s): Nick Pullen, Richard J. Morris
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12862-016-0837-3

PhyInformR: phylogenetic experimental design and phylogenomic data exploration in R
Cited by: 38
Author(s): Alex Dornburg, Jeffrey Nicholas Fisk, Jules A. Tamagnan, Jeffrey P. Townsend
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0101685

Genetic Variation in DNA Repair Pathways and Risk of Non-Hodgkin's Lymphoma
Cited by: 20
Author(s): Justin Rendleman, Yevgeniy Antipin, Boris Reva, Christina Adaniel, Jennifer A. Przybylo, Ana Dutra-Clarke, Nichole Hansen, Adriana Heguy, Kety Huberman, Laetitia Borsu, Ora Paltiel, Dina Ben‐Yehuda, Jennifer R. Brown, Arnold S. Freedman, Chris Sander, Andrew D. Zelenetz, Robert J. Klein, Yongzhao Shao, Mortimer J. Lacher, Joseph Vijai, Kenneth Offit, Tomas Kirchhoff
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0208829

Complex spatio-temporal distribution and genomic ancestry of mitochondrial DNA haplogroups in 24,216 Danes
Cited by: 5
Author(s): Jonas Bybjerg‐Grauholm, Christian Munch Hagen, Vanessa F. Gonçalves, Marie Bækvad‐Hansen, Christine Hansen, Paula L. Hedley, Jørgen K. Kanters, Jimmi Nielsen, Michael Theisen, Ole Mors, James L. Kennedy, Thomas Damm Als, Alfonso Buil Demur, Merete Nordentoft, Anders D. Børglum, Preben Bo Mortensen, Thomas Werge, David M. Hougaard, Michael Christiansen
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0146538

Knowledge of Bovine Tuberculosis, Cattle Husbandry and Dairy Practices amongst Pastoralists and Small-Scale Dairy Farmers in Cameroon
Cited by: 38
Author(s): Robert F. Kelly, Saidou M. Hamman, K. L. Morgan, Egbe Franklyn Nkongho, Victor Ngu Ngwa, Vincent N. Tanya, Walters N. Andu, Melissa Sander, Lucy Ndip, Ian Handel, Stella Mazeri, Adrian Muwonge, Barend M. deC. Bronsvoort
Software Mentions: 1
Published: almost 9 years ago

10.1038/s41598-021-83823-8

High diversity, inbreeding and a dynamic Pleistocene demographic history revealed by African buffalo genomes
Cited by: 8
Author(s): Deon de Jager, Brigitte Glanzmann, Marlo Möller, Eileen G. Hoal, Paul van Helden, Cindy Kim Harper, Paulette Bloomer
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12864-016-2669-3

High-specificity detection of rare alleles with Paired-End Low Error Sequencing (PELE-Seq)
Cited by: 19
Author(s): Jessica L. Preston, Ariel Royall, Melissa A Randel, Kristin L. Sikkink, Patrick C. Phillips, Eric A. Johnson
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0099782

Human Coronaviruses Associated with Upper Respiratory Tract Infections in Three Rural Areas of Ghana
Cited by: 63
Author(s): Michael Owusu, Augustina Annan, Victor M. Corman, Richard Larbi, Priscilla Anti, Jan Felix Drexler, Olivia Agbenyega, Yaw Adu‐Sarkodie, Christian Drosten
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-021-84914-2

Long-term monitoring of SARS-CoV-2 RNA in wastewater of the Frankfurt metropolitan area in Southern Germany
Cited by: 92
Author(s): Shelesh Agrawal, Laura Orschler, Susanne Lackner
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0098076

Genome-Wide Analysis of Cold Adaptation in Indigenous Siberian Populations
Cited by: 119
Author(s): Alexia Cardona, Luca Pagani, Tiago Antão, Daniel J. Lawson, Christina A. Eichstaedt, Bryndís Yngvadóttir, Ma Than Than Shwe, Joseph Wee, Irene Gallego Romero, Srilakshmi M. Raj, Mait Metspalu, Richard Villems, Eske Willerslev, Chris Tyler‐Smith, B. A. Malyarchuk, Miroslava Derenko, Toomas Kivisild
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0205429

Tool making cockatoos adjust the lengths but not the widths of their tools to function
Cited by: 14
Author(s): Alice M. I. Auersperg, Celeste de Kock, Mark O’Hara, Ludwig Huber
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-021-84911-5

ABA signalling and metabolism are not essential for dark-induced stomatal closure but affect response speed
Cited by: 11
Author(s): Ashley J. Pridgeon, Alistair M. Hetherington
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0179172

Trends in food insecurity for adults with cardiometabolic disease in the United States: 2005-2012
Cited by: 96
Author(s): Seth A. Berkowitz, Theodore S Z Berkowitz, James B. Meigs, Deborah J. Wexler
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0257583

Racial and ethnic disparities in HIV diagnoses among heterosexually active persons in the United States nationally and by state, 2018
Cited by: 4
Author(s): Erika G. Martin, Bahareh Ansari, Rachel Hart-Malloy, Dawn K. Smith, Kevin P. Delaney, Thomas L. Gift, Andrés A. Berruti, Monica Trigg, Eli S. Rosenberg
Software Mentions: 1
Published: about 3 years ago

10.1186/s12864-020-6565-5

Complete genome sequence and annotation of the laboratory reference strain Shigella flexneri serotype 5a M90T and genome-wide transcriptional start site determination
Cited by: 8
Author(s): Ramón Cervantes-Rivera, Sophie Tronnet, Andrea Puhar
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-85367-3

Vaginal microbiome and serum metabolite differences in late gestation commercial sows at risk for pelvic organ prolapse
Cited by: 9
Author(s): Zoë E Kiefer, Lucas R Koester, Lucas Showman, Jamie M Studer, Amanda Chipman, Aileen F. Keating, Stephan Schmitz‐Esser, Jason W. Ross
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0247783

Transcriptome analysis of the role of autophagy in plant response to heat stress
Cited by: 4
Author(s): Yan Zhang, Haoxuan Min, Chengchen Shi, Xia Gao, Zhibing Lai
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-84827-0

A multi-scale pipeline linking drug transcriptomics with pharmacokinetics predicts in vivo interactions of tuberculosis drugs
Cited by: 11
Author(s): Joseph M. Cicchese, Awanti Sambarey, Denise E. Kirschner, Jennifer J. Linderman, Sriram Chandrasekaran
Software Mentions: 1
Published: over 3 years ago

10.1523/ENEURO.0024-16.2016

Transcriptional Profiling of Newly Generated Dentate Granule Cells Using TU Tagging Reveals Pattern Shifts in Gene Expression during Circuit Integration
Cited by: 20
Author(s): Christina Chatzi, Yingyu Zhang, Rongkun Shen, Gary L. Westbrook, Richard H. Goodman
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0230141

Design of composite measure schemes for comparative severity assessment in animal-based neuroscience research: A case study focussed on rat epilepsy models
Cited by: 15
Author(s): Roelof Maarten van Dijk, Ines Koska, André Bleich, René Tolba, Isabel Seiffert, Christina Möller, Valentina Di Liberto, Steven R. Talbot, Heidrun Potschka
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-86244-9

Finding Nemo’s clock reveals switch from nocturnal to diurnal activity
Cited by: 7
Author(s): Gregor Schalm, Kristina Bruns, Nina Drachenberg, Nathalie Geyer, Nicholas S. Foulkes, Cristiano Bertolucci, Gabriele Gerlach
Software Mentions: 1
Published: over 3 years ago

10.7717/peerj.5315

Touch-screen-guided task reveals a prosocial choice tendency by chimpanzees (Pan troglodytes)
Cited by: 4
Author(s): Renata S. Mendonça, Christoph D. Dahl, Susana Carvalho, Tetsuro Matsuzawa, Ikuma Adachi
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.11608

Scaling the effects of ocean acidification on coral growth and coral–coral competition on coral community recovery
Cited by: 4
Author(s): Nicolas R. Evensen, Yves‐Marie Bozec, Peter J. Edmunds, Peter J. Mumby
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-86590-8

Dynamic bacterial community response to Akashiwo sanguinea (Dinophyceae) bloom in indoor marine microcosms
Cited by: 9
Author(s): Seung Won Jung, JunSu Kang, Joon‐Sang Park, Hyoung Min Joo, Sung-Suk Suh, Di Kang, Taek-Kyun Lee, Hyun-Jung Kim
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-86304-0

A novel causality-centrality-based method for the analysis of the impacts of air pollutants on PM2.5 concentrations in China
Cited by: 1
Author(s): Bo-Cheng Wang
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-021-86369-x

Integrating buccal and occlusal dental microwear with isotope analyses for a complete paleodietary reconstruction of Holocene populations from Hungary
Cited by: 5
Author(s): Raquel Hernando, Beatriz Gamarra, Ashley McCall, Olivia Cheronet, Daniel Fernandes, Kendra Sirak, Ryan Schmidt, Marina Lozano, Tamás Szeniczey, Tamás Hajdu, Annamária Bárány, András Kalli, Eszter K Tutkovics, Kitti Köhler, Krisztián Kiss, Judit Koós, Piroska Csengeri, Ágnes Király, Antónia Horváth, Melinda L Hajdu, K. Tóth, R Patay, Robin N. M. Feeney, Ron Pinhasi
Software Mentions: 1
Published: over 3 years ago

10.1523/ENEURO.0300-19.2019

Characterization of Auditory and Binaural Spatial Hearing in a Fragile X Syndrome Mouse Model
Cited by: 11
Author(s): Elizabeth A. McCullagh, Shani Poleg, Nathaniel T. Greene, Molly M. Huntsman, Daniel J. Tollin, Achim Klug
Software Mentions: 1
Published: almost 5 years ago

Projects: cran: ggplot2

Papers Mentioning ggplot2 11,441