cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3390/cancers11040511

LC/MS-Based Polar Metabolite Profiling Identified Unique Biomarker Signatures for Cervical Cancer and Cervical Intraepithelial Neoplasia Using Global and Targeted Metabolomics
Cited by: 31
Author(s): Imran Khan, Miso Nam, Minji Kwon, Seung‐Woo Seo, Sunhee Jung, Jiyou Han, Geum‐Sook Hwang, Mi Kyung Kim
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2019.00160

Diversity and Distribution of Sulfur Oxidation-Related Genes in Thioalkalivibrio, a Genus of Chemolithoautotrophic and Haloalkaliphilic Sulfur-Oxidizing Bacteria
Cited by: 43
Author(s): Tom Berben, Lex Overmars, Dimitry Y. Sorokin, Gerard Muyzer
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-31085-2

Analysis By Deep Sequencing of Discontinued Neurotropic Yellow Fever Vaccine Strains
Cited by: 17
Author(s): Andrew S. Beck, Thomas G. Wood, Steven G. Widen, Jill C. Thompson, Alan D.T. Barrett
Software Mentions: 1
Published: almost 8 years ago

10.1038/s12276-018-0142-x

Extracellular vesicles from pluripotent stem cell-derived mesenchymal stem cells acquire a stromal modulatory proteomic pattern during differentiation
Cited by: 42
Author(s): Alejandro La Greca, Claudia Solari, Verónica Alejandra Furmento, Antonella Lombardi, M. C. Biani, Cyntia Abán, Lucía Moro, Marcela Nilda García, Alejandra Guberman, Gustavo Sevlever, Santiago Gabriel Miriuka, Carlos Luzzani
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.32822

Sci-Hub provides access to nearly all scholarly literature
Cited by: 89
Author(s): Daniel S. Himmelstein, Ariel Rodriguez Romero, Jacob Levernier, Thomas A. Munro, Stephen Reid McLaughlin, Bastian Greshake Tzovaras, Casey S. Greene
Software Mentions: 1
Published: over 8 years ago

10.1523/ENEURO.0009-19.2019

Critical Analysis of Particle Detection Artifacts in Synaptosome Flow Cytometry
Cited by: 13
Author(s): Benjamin D. Hobson, Peter A. Sims
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-31950-0

Natural variation among Arabidopsis thaliana accessions in tolerance to high magnesium supply
Cited by: 15
Author(s): Yaofang Niu, Ping Chen, Yu Zhang, Zhongwei Wang, Shikai Hu, Gulei Jin, Caixian Tang, Longbiao Guo
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2018.03360

Exploiting the Richness of Environmental Waterborne Bacterial Species to Find Natural Legionella pneumophila Competitors
Cited by: 22
Author(s): Marie Hélène Corre, Vincent Delafont, Anasthasia Legrand, Jean‐Marc Berjeaud, Julien Verdon
Software Mentions: 1
Published: over 7 years ago

10.3390/cancers12010070

Integrated Analysis of Structural Variation and RNA Expression of FGFR2 and Its Splicing Modulator ESRP1 Highlight the ESRP1amp-FGFR2norm-FGFR2-IIIchigh Axis in Diffuse Gastric Cancer
Cited by: 12
Author(s): Sara Pinto Teles, Patrícia Oliveira, Marta Ferreira, Joana Carvalho, Pedro Ferreira, Carla Oliveíra
Software Mentions: 1
Published: over 6 years ago

10.1186/s12937-015-0119-8

Body adiposity index performance in estimating body fat in a sample of severely obese Brazilian patients
Cited by: 16
Author(s): G. Belarmino, L.M. Horie, Priscila Sala, Raquel Susana Torrinhas, Steven B. Heymsfield, Dan Linetzky Waitzberg
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.48904

ZP4 confers structural properties to the zona pellucida essential for embryo development
Cited by: 27
Author(s): Ismael Lamas-Toranzo, Noelia Fonseca Balvís, Ana Querejeta-Fernández, María José Izquierdo-Rico, Leopoldo González-Brusi, P.L. Lorenzo, Pilar García-Rebollar, Manuel Avilés, Pablo Bermejo-Álvarez
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.698970

Antibiotic Breakdown by Susceptible Bacteria Enhances the Establishment of β-Lactam Resistant Mutants
Cited by: 8
Author(s): Manja Saebelfeld, Suman Das, Jorn Brink, Arno Hagenbeek, Joachim Krug, Jaap Visser
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12864-021-07779-9

Amino acid transporter (AAT) gene family in foxtail millet (Setaria italica L.): widespread family expansion, functional differentiation, roles in quality formation and response to abiotic stresses
Cited by: 8
Author(s): Yang Yang, Yongmao Chai, Jiayi Liu, Jie Zheng, Zhangchen Zhao, Aduragbemi Amo, Chunge Cui, Qiumei Lu, Liang Chen, Yin‐Gang Hu
Software Mentions: 1
Published: almost 5 years ago

10.3390/ma13173802

Margin Integrity of Bulk-Fill Composite Restorations in Primary Teeth
Cited by: 14
Author(s): Alina Paganini, Thomas Attin, Tobias T. Tauböck
Software Mentions: 1
Published: almost 6 years ago

10.3390/ma12233932

Biocompatibility Investigation of Hybrid Organometallic Polymers for Sub-Micron 3D Printing via Laser Two-Photon Polymerisation
Cited by: 6
Author(s): Evaldas Balčiūnas, Nadežda Dreižė, Monika Grubliauskaitė, Silvija Urnikytė, Egidijus Šimoliūnas, Virginija Bukelskienė, Mindaugas Valius, Sara J. Baldock, John G. Hardy, Daiva Baltriukienė
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers12051080

YM155-Adapted Cancer Cell Lines Reveal Drug-Induced Heterogeneity and Enable the Identification of Biomarker Candidates for the Acquired Resistance Setting
Cited by: 4
Author(s): Martin Michaelis, Mark N. Wass, Ian Reddin, Yvonne Voges, Florian Rothweiler, Stephanie Hehlgans, Jaroslav Činátl, Marco Mernberger, Andrea Nist, Thorsten Stiewe, Franz Rödel, Jindřich Činátl
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers13061471

Epithelial Mutant p53 Promotes Resistance to Anti-PD-1-Mediated Oral Cancer Immunoprevention in Carcinogen-Induced Mouse Models
Cited by: 4
Author(s): Jin Wang, Yuan Hu, Vicente Escamilla-Rivera, Cassandra L. Gonzalez, Lin Tang, Bingbing Wang, Adel K. El‐Naggar, Jeffrey N. Myers, Carlos Caulín
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-018-32338-w

Green microalgae in marine coastal waters: The Ocean Sampling Day (OSD) dataset
Cited by: 70
Author(s): Margot Tragin, Daniel Vaulot
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2019.03024

Comprehensive and Durable Modulation of Growth, Development, Lifespan and Fecundity in Anopheles stephensi Following Larval Treatment With the Stress Signaling Molecule and Novel Antimalarial Abscisic Acid
Cited by: 3
Author(s): Dean M Taylor, Cassandra Olds, Reagan S Haney, Brandi K. Torrevillas, Shirley Luckhart
Software Mentions: 1
Published: over 6 years ago

10.1038/s12276-019-0358-4

Altered platelet proteome in lupus anticoagulant (LA)-positive patients—protein disulfide isomerase and NETosis as new players in LA-related thrombosis
Cited by: 16
Author(s): Lena Hell, Kristina Lurger, Lisa-Marie Mauracher, Ella Grilz, Christina Maria Reumiller, Georg Schmidt, Huriye Ercan, Silvia Koder, Alice Assinger, José Basílio, Johanna Gebhart, Cihan Ay, Ingrid Pabinger, Maria Zellner
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2018.00591

The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species
Cited by: 13
Author(s): Clara Atterby, Evangelos Mourkas, Guillaume Méric, Ben Pascoe, Helen Wang, Jonas Waldenström, Samuel K. Sheppard, Björn Olsén, Josef D. Järhult, Patrik Ellström
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2019.00493

Characterization of the Interactive Effects of Labile and Recalcitrant Organic Matter on Microbial Growth and Metabolism
Cited by: 10
Author(s): Lauren N. M. Quigley, Abigail Edwards, Andrew D. Steen, Alison Buchan
Software Mentions: 1
Published: over 7 years ago

10.3390/md19050268

Diet Supplementation with Fish-Derived Extracts Suppresses Diabetes and Modulates Intestinal Microbiome in a Murine Model of Diet-Induced Obesity
Cited by: 4
Author(s): Konstantinos Axarlis, Maria Daskalaki, Sofia Michailidou, Nikolais Androulaki, Antiopi Tsoureki, Evangelia Mouchtaropoulou, Ourania Kolliniati, Ioanna Lapi, Eirini Dermitzaki, Maria Venihaki, Katerina Kousoulaki, Anagnostis Argiriou, Zouhir El Marsni, Christos Tsatsanis
Software Mentions: 1
Published: about 5 years ago

10.3390/cancers12082151

Germline Genetic Findings Which May Impact Therapeutic Decisions in Families with a Presumed Predisposition for Hereditary Breast and Ovarian Cancer
Cited by: 4
Author(s): Carolina Velázquez, Kim De Leeneer, Eva Esteban-Cardeñosa, Francisco Avila Cobos, Enrique Lastra, Luis E. Abella, Virginia de la Cruz, Carmen D. Lobatón, Kathleen Claes, Mercedes Durán, Mar Infante
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12859-021-04324-z

LLAMA: a robust and scalable machine learning pipeline for analysis of large scale 4D microscopy data: analysis of cell ruffles and filopodia
Cited by: 1
Author(s): James G. Lefevre, Yvette W. H. Koh, Adam A. Wall, Nicholas D. Condon, Jennifer L. Stow, Nicholas A. Hamilton
Software Mentions: 1
Published: almost 5 years ago

10.3390/cancers13061327

Integrated Metabolomics and Transcriptomics Analysis of Monolayer and Neurospheres from Established Glioblastoma Cell Lines
Cited by: 6
Author(s): Joana Peixoto, Sudha Janaki‐Raman, Lisa Schlicker, W. Schmitz, Susanne Walz, Alina M Winkelkotte, Christel Herold‐Mende, Paula Soares, Almut Schulze, Jorge Lima
Software Mentions: 1
Published: over 5 years ago

10.3390/md14030054

Comparison of Protein Phosphatase Inhibition Assay with LC-MS/MS for Diagnosis of Microcystin Toxicosis in Veterinary Cases
Cited by: 23
Author(s): Caroline E. Moore, Jeanette Juan, Yanping Lin, Cynthia L. Gaskill, Birgit Puschner
Software Mentions: 1
Published: over 10 years ago

10.3390/cancers12082000

Discovery of Prognostic Markers for Early-Stage High-Grade Serous Ovarian Cancer by Maldi-Imaging
Cited by: 11
Author(s): Hagen Kulbe, Oliver Klein, Zhiyang Wu, Eliane Tabea Taube, Wanja Kassuhn, David Horst, Silvia Darb‐Esfahani, Paul Jank, Salem Abobaker, Frauke Ringel, Andreas du Bois, Florian Heitz, Jalid Sehouli, Elena Ioana Braicu
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-018-32693-8

Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage
Cited by: 52
Author(s): Katarzyna Bachanek‐Bankowska, Antonello Di Nardo, Jemma Wadsworth, Valérie Mioulet, Giulia Pezzoni, Santina Grazioli, Emiliana Brocchi, Sharmila Chapagain Kafle, Ranjani Hettiarachchi, Pradeep Lakpriya Kumarawadu, Ibrahim Eldaghayes, Abdunaser Dayhum, Deodass Meenowa, Soufien Sghaier, Hafsa Madani, Nabil Abouchoaib, Bui H. Hoang, Pham P. Vu, Kinzang Dukpa, Ratna B. Gurung, Sangay Tenzin, Ulrich Wernery, Alongkorn Panthumart, Kingkarn Boonsuya Seeyo, Wilai Linchongsubongkoch, Anthony Relmy, Labib Bakkali‐Kassimi, A. V. Scherbakov, Donald P. King, Nick J. Knowles
Software Mentions: 1
Published: over 7 years ago

10.3390/md16100367

APS8 Delays Tumor Growth in Mice by Inducing Apoptosis of Lung Adenocarcinoma Cells Expressing High Number of α7 Nicotinic Receptors
Cited by: 6
Author(s): Sabina Berne, Maja Čemažar, Robert Frangež, Polona Juntes, Simona Kranjc, Marjana Grandič, Monika Savarin, Tom Turk
Software Mentions: 1
Published: over 7 years ago

10.1038/cddis.2017.14

ID2 promotes survival of glioblastoma cells during metabolic stress by regulating mitochondrial function
Cited by: 22
Author(s): Zhonghua Zhang, Gilbert J. Rahme, Pranam Chatterjee, Matthew C. Havrda, Mark A. Israel
Software Mentions: 1
Published: over 9 years ago

10.3390/cancers11091353

CYP2D6 Genotype Predicts Plasma Concentrations of Tamoxifen Metabolites in Ethiopian Breast Cancer Patients
Cited by: 13
Author(s): Jemal Hussien Ahmed, Eyasu Makonnen, Alan Fotoohi, Abraham Aseffa, Rawleigh Howe, Eleni Aklillu
Software Mentions: 1
Published: almost 7 years ago

10.3390/cancers12082045

Early Change in the Plasma Levels of Circulating Soluble Immune Checkpoint Proteins in Patients with Unresectable Hepatocellular Carcinoma Treated by Lenvatinib or Transcatheter Arterial Chemoembolization
Cited by: 10
Author(s): Naoshi Odagiri, Hai Hoang, Lê Thị Thanh Thủy, Minh Phuong Dong, Maito Suoh, Kohei Kotani, Atsushi Hagihara, Sawako Uchida‐Kobayashi, Masaru Enomoto, Norifumi Kawada
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers13184625

Targeting OLFML3 in Colorectal Cancer Suppresses Tumor Growth and Angiogenesis, and Increases the Efficacy of Anti-PD1 Based Immunotherapy
Cited by: 8
Author(s): Jimmy Stalin, Beat A. Imhof, Oriana Coquoz, Rachel Jeitziner, Pascal Hammel, Thomas Alexander Mckee, Stéphane Jemelin, Marine Poittevin, Marc Pocard, Thomas Matthes, Rachid Kaci, Mauro Delorenzi, Curzio Rüegg, Marijana Miljkovic‐Licina
Software Mentions: 1
Published: almost 5 years ago

10.1111/evo.12401

DETECTING CRYPTIC INDIRECT GENETIC EFFECTS
Cited by: 27
Author(s): Nathan W. Bailey, Jessica L. Hoskins
Software Mentions: 1
Published: about 12 years ago

10.1038/s41598-018-33357-3

Placental FKBP51 mediates a link between second trimester maternal anxiety and birthweight in female infants
Cited by: 10
Author(s): Katie L. Togher, Gerard W. O’Keeffe, Ali S. Khashan, Gerard Clarke, Louise C. Kenny
Software Mentions: 1
Published: over 7 years ago

10.1111/age.12181

Mutations in O vis aries TMEM 154 are associated with lower small ruminant lentivirus proviral concentration in one sheep flock
Cited by: 14
Author(s): Fahad Alshanbari, Michelle R. Mousel, James O. Reynolds, Lynn M. Herrmann‐Hoesing, Margaret A. Highland, Gregory S. Lewis, Stephen N. White
Software Mentions: 1
Published: about 12 years ago

10.3390/cancers13020275

Role of Omentin in Obesity Paradox in Lung Cancer
Cited by: 8
Author(s): S.C. Parida, Sumit Siddharth, Dipali Sharma
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-33525-5

E-cadherin loss induces targetable autocrine activation of growth factor signalling in lobular breast cancer
Cited by: 53
Author(s): K.L. Teo, Laura Gómez-Cuadrado, Milou Tenhagen, Adam Byron, Max A K Rätze, Miranda van Amersfoort, Jojanneke Renes, Eric Strengman, Amit Mandoli, Abhishek A. Singh, Joost H.A. Martens, Hendrik G. Stunnenberg, Paul J. van Diest, Valerie G. Brunton, Patrick W.B. Derksen
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2021.684092

Complete Genome Sequence of Xylella taiwanensis and Comparative Analysis of Virulence Gene Content With Xylella fastidiosa
Cited by: 6
Author(s): Ling-Wei Weng, Yuchen Lin, Chiou-Chu Su, Cheng Tung Huang, Shu-Ting Cho, Aiping Chen, Shu‐Jen Chou, Chang‐Her Tsai, Chih-Horng Kuo
Software Mentions: 1
Published: about 5 years ago

10.1007/s10456-018-9642-5

Activin receptor-like kinase 1 is associated with immune cell infiltration and regulates CLEC14A transcription in cancer
Cited by: 38
Author(s): Matteo Bocci, Jonas Sjölund, Ewa Kurzejamska, David Lindgren, Nour Al Dain Marzouka, Michael Bartoschek, Mattias Höglund, Kristian Pietras
Software Mentions: 1
Published: almost 8 years ago

10.1128/mBio.01053-16

Recombination in Streptococcus pneumoniae Lineages Increase with Carriage Duration and Size of the Polysaccharide Capsule
Cited by: 45
Author(s): Chrispin Chaguza, Cheryl P. Andam, Simon R. Harris, Jennifer Cornick, Marie Yang, Laura Bricio-Moreno, Arox W Kamng’ona, Julian Parkhill, Neil French, Robert S. Heyderman, Aras Kadioglu, Dean Everett, Stephen D. Bentley, William P. Hanage
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0220485

Toxicity and bioaccumulation of Cadmium, Copper and Zinc in a direct comparison at equitoxic concentrations in common carp (Cyprinus carpio) juveniles
Cited by: 36
Author(s): Vyshal Delahaut, Božidar Rašković, Marta Satorres Salvado, Lieven Bervoets, Ronny Blust, Gudrun De Boeck
Software Mentions: 1
Published: about 6 years ago

10.1007/s00216-018-01566-4

Toward an efficient workflow for the analysis of the human milk peptidome
Cited by: 19
Author(s): Kelly A. Dingess, Henk W. P. van den Toorn, Marko Mank, Bernd Stahl, Albert J. R. Heck
Software Mentions: 1
Published: over 7 years ago

10.3390/md18110582

Structural Similarities between Some Common Fluorophores Used in Biology, Marketed Drugs, Endogenous Metabolites, and Natural Products
Cited by: 7
Author(s): Steve O’Hagan, Douglas B. Kell
Software Mentions: 1
Published: over 5 years ago

10.3390/md18010066

Lipoxygenase Pathways in Diatoms: Occurrence and Correlation with Grazer Toxicity in Four Benthic Species
Cited by: 8
Author(s): Nadia Ruocco, Genoveffa Nuzzo, Giuliana d’Ippolito, Emiliano Manzo, Angela Sardo, Adrianna Ianora, Giovanna Romano, Antonella Iuliano, Valerio Zupo, Maria Costantini, Angelo Fontana
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-020-06825-2

RNA-sequencing reveals positional memory of multipotent mesenchymal stromal cells from oral and maxillofacial tissue transcriptomes
Cited by: 10
Author(s): Satoru Onizuka, Yasuharu Yamazaki, Sung‐Joon Park, Tomosada Sugimoto, Yoshitsugu Sone, Sebastian Sjöqvist, Michihiko Usui, Akiko Takeda, Kenta Nakai, Keisuke Nakashima, Takanori Iwata
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0183765

Association between statin use, the vaginal microbiome, and Gardnerella vaginalis vaginolysin-mediated cytotoxicity
Cited by: 18
Author(s): Abdallah A. Abdelmaksoud, Philippe H. Girerd, Erin M. Garcia, J. Paul Brooks, Lauren M. Leftwich, Nihar U. Sheth, Steven Bradley, Myrna G. Serrano, Jennifer M. Fettweis, Bernice Huang, Jerome F. Strauss, Gregory A. Buck, Kimberly K. Jefferson
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0229730

In silico analysis of the tryptophan hydroxylase 2 (TPH2) protein variants related to psychiatric disorders
Cited by: 11
Author(s): Gabriel Rodrigues Coutinho Pereira, Gustavo Duarte Bocayuva Tavares, Marta Costa de Freitas, Joelma Freire De Mesquita
Software Mentions: 1
Published: over 6 years ago

10.3399/bjgpopen18X101622

Family practitioners' top medical priorities when managing patients with multimorbidity: a cross-sectional study
Cited by: 6
Author(s): Lilli Herzig, Yolanda Müeller, Dagmar M. Haller, Andreas Zeller, Stefan Neuner-Jehle, Anouk Déruaz‐Luyet, Christine Cohidon, Sven Streit, Bernard Burnand, Jean-Christophe Zuchuat
Software Mentions: 1
Published: over 7 years ago

10.1186/s12936-020-03166-z

Clinical and laboratory features associated with serum phosphate concentrations in malaria and other febrile illnesses
Cited by: 3
Author(s): Ho-Ming E. Suen, Geoffrey Pasvol, Aubrey J. Cunnington
Software Mentions: 1
Published: over 6 years ago

10.18632/aging.103926

Identification of a competing endogenous RNA axis related to gastric cancer
Cited by: 9
Author(s): Fuqiang Zu, Hezhou Han, Weiwei Sheng, Jian Sun, Hui Zang, Yu Liang, Qingfeng Li
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0238381

Nystose regulates the response of rice roots to cold stress via multiple signaling pathways: A comparative proteomics analysis
Cited by: 3
Author(s): Zijie Zhang, Wenfei Xiao, Jieren Qiu, Ya Xin, Qinpo Liu, Huizhe Chen, Yaping Fu, Huiqin Ma, Wenyue Chen, Yuqin Huang, Songlin Ruan, Jianli Yan
Software Mentions: 1
Published: almost 6 years ago

10.1093/conphys/coab018

Plasma proteomics of green turtles (<i>Chelonia mydas</i>) reveals pathway shifts and potential biomarker candidates associated with health and disease
Cited by: 2
Author(s): David Marancik, Justin R. Perrault, Lisa M. Komoroske, Jamie Adkins Stoll, Kristina N Kelley, Charles A. Manire
Software Mentions: 1
Published: over 5 years ago

10.1186/s12936-018-2475-2

An expanded global inventory of allelic variation in the most extremely polymorphic region of Plasmodium falciparum merozoite surface protein 1 provided by short read sequence data
Cited by: 6
Author(s): Harvey Aspeling-Jones, David J. Conway
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-35460-x

The timing and widespread effects of the largest Holocene volcanic eruption in Antarctica
Cited by: 36
Author(s): Dermot Antoniades, Santiago Giralt, Adelina Geyer, Antonio M. Álvarez‐Valero, Sergi Pla-Rabés, Ignacio Granados, Emma Liu, Manuel Toro, John L. Smellie, Marc Oliva
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2019.02502

Microbiome Response to Hot Water Treatment and Potential Synergy With Biological Control on Stored Apples
Cited by: 47
Author(s): Birgit Wassermann, Peter Kusstatscher, Gabriele Berg
Software Mentions: 1
Published: over 6 years ago

10.3389/fmed.2021.699706

Laboratory Testing Implications of Risk-Stratification and Management of COVID-19 Patients
Cited by: 2
Author(s): Caidong Liu, Ziyu Wang, Wei Wu, Changgang Xiang, Lingxiang Wu, Jie Li, Weiye Hou, Huiling Sun, Youli Wang, Zhenling Nie, Yingdong Gao, Ruisheng Zhang, Hong Tang, Qianghu Wang, Kening Li, Xinyi Xia, Pengping Li, Shukui Wang
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-018-35834-1

Dorsolateral and medial prefrontal cortex mediate the influence of incidental priming on economic decision making in obesity
Cited by: 18
Author(s): Filip Morys, Stefan Bode, Annette Horstmann
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0232420

Comparison of self-report versus accelerometer – measured physical activity and sedentary behaviors and their association with body composition in Latin American countries
Cited by: 39
Author(s): Gérson Ferrari, Irina Kovalskys, Mauro Fisberg, Georgina Gómez, Attilio Rigotti, Lilia Yadira Cortés Sanabria, Martha Cecilia Yépez García, Rossina G. Pareja, Marianella Herrera-Cuenca, Ioná Zalcman Zimberg, Viviana Guajardo, Michael Pratt, Carlos Pires, Rachel C. Colley, Dírceu Solé
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-33252-x

The proton and metal binding sites responsible for the pH-dependent green-red bioluminescence color tuning in firefly luciferases
Cited by: 12
Author(s): Vadim R. Viviani, Gabriele Verônica de Mello Gabriel, Vanessa R. Bevilaqua, A. Simões, Takashi Hirano, Paulo Sérgio Lopes-de-Oliveira
Software Mentions: 1
Published: over 7 years ago

10.1007/s00216-016-0003-1

High-throughput and simultaneous quantitative analysis of homocysteine–methionine cycle metabolites and co-factors in blood plasma and cerebrospinal fluid by isotope dilution LC–MS/MS
Cited by: 66
Author(s): Seu Ping Guiraud, Ivan Montoliu, Laeticia Da Silva, Loı̈c Dayon, Antonio Núñez Galindo, John Corthésy, Martin Kussmann, François-Pierre Martin
Software Mentions: 1
Published: over 9 years ago

10.1007/s00216-021-03468-4

Optimization of a human milk–directed quantitative sIgA ELISA method substantiated by mass spectrometry
Cited by: 6
Author(s): Kelly A. Dingess, Pauline van Dam, Jing Zhu, Marko Mank, Karen Knipping, Albert J. R. Heck, Bernd Stahl
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2019.00487

Detection of Aminoglycoside Resistant Bacteria in Sludge Samples From Norwegian Drinking Water Treatment Plants
Cited by: 15
Author(s): Ingvild Falkum Ullmann, Hege Smith Tunsjø, Monica Andreassen, Kaare Magne Nielsen, Vidar Lund, Colin Charnock
Software Mentions: 1
Published: over 7 years ago

10.1128/mBio.02311-16

Nonselective Bottlenecks Control the Divergence and Diversification of Phase-Variable Bacterial Populations
Cited by: 13
Author(s): Jack Aidley, Shweta Rajopadhye, Nwanekka M. Akinyemi, Lea Lango-Scholey, Michael A. Jones, Christopher D. Bayliss
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0052746

Dried Whole Plant Artemisia annua as an Antimalarial Therapy
Cited by: 89
Author(s): Mostafa A. Elfawal, Melissa J. Towler, Nicholas G. Reich, Douglas T. Golenbock, Pamela J. Weathers, Stephen M. Rich
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0204778

Optimization of T-DNA architecture for Cas9-mediated mutagenesis in Arabidopsis
Cited by: 80
Author(s): Baptiste Castel, Laurence Tomlinson, Federica Locci, Ying Yang, Jonathan D. G. Jones
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0166854

Single Amino Acid Repeats in the Proteome World: Structural, Functional, and Evolutionary Insights
Cited by: 18
Author(s): Amitha Sampath Kumar, Divya Tej Sowpati, Rakesh Mishra
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-018-36248-9

The impact of cigarette smoke exposure, COPD, or asthma status on ABC transporter gene expression in human airway epithelial cells
Cited by: 31
Author(s): Jennifer A. Aguiar, Andrea Tamminga, Briallen Lobb, Ryan D. Huff, Julie T. Nguyen, Yechan Kim, Anna Dvorkin‐Gheva, Martin R. Stämpfli, Andrew C. Doxey, Jeremy A. Hirota
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-14-136

A Drosophila functional evaluation of candidates from human genome-wide association studies of type 2 diabetes and related metabolic traits identifies tissue-specific roles for dHHEX
Cited by: 38
Author(s): Jay Pendse, Prasanna Venkatesh Ramachandran, Jianbo Na, Narisu Narisu, Jill L. Fink, Ross L. Cagan, Francis S. Collins, Thomas J. Baranski
Software Mentions: 1
Published: over 13 years ago

10.3389/fmed.2020.00064

Immune and Stroma Related Genes in Breast Cancer: A Comprehensive Analysis of Tumor Microenvironment Based on the Cancer Genome Atlas (TCGA) Database
Cited by: 42
Author(s): Ming Xu, Li Yu, Wenhui Li, Qiu Zhao, Qiulei Zhang, Kehao Le, Ziwei Huang, Pengfei Yi
Software Mentions: 1
Published: over 6 years ago

10.1186/s12936-018-2511-2

Dramatic decreases of malaria transmission intensities in Ifakara, south-eastern Tanzania since early 2000s
Cited by: 37
Author(s): Marceline Finda, Alex J. Limwagu, Halfan S. Ngowo, Nancy S. Matowo, Johnson Kyeba Swai, Emmanuel W. Kaindoa, Fredros O. Okumu
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-36188-4

Deciphering the evolution of Deception Island’s magmatic system
Cited by: 28
Author(s): Adelina Geyer, Antonio M. Álvarez‐Valero, Guillem Gisbert, M. Aulinas, Daniel Hernández-Barreña, Agustín Lobo, Joan Martı́
Software Mentions: 1
Published: over 7 years ago

10.1186/s12885-015-1909-2

Inhibiting inducible miR-223 further reduces viable cells in human cancer cell lines MCF-7 and PC3 treated by celastrol
Cited by: 25
Author(s): Lu Cao, Xue Zhang, Fanfan Cao, Ying Wang, Yu-fan Shen, Chen Yang, Georges Uzan, Bin Peng, Denghai Zhang
Software Mentions: 1
Published: over 10 years ago

10.3389/fgene.2021.625246

System-Level Analysis of Alzheimer’s Disease Prioritizes Candidate Genes for Neurodegeneration
Cited by: 6
Author(s): Jeffrey L. Brabec, Montana Kay Lara, Anna L. Tyler, James Mahoney
Software Mentions: 1
Published: about 5 years ago

10.3389/fgene.2021.683668

Comparative Repeat Profiling of Two Closely Related Conifers (Larix decidua and Larix kaempferi) Reveals High Genome Similarity With Only Few Fast-Evolving Satellite DNAs
Cited by: 6
Author(s): Tony Heitkam, Luise Schulte, B. Weber, Susan Liedtke, Sarah Breitenbach, Anja Kögler, Kristin Morgenstern, Marie Brückner, Ute Tröber, Heino Wolf, Doris Krabel, Thomas Schmidt
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12936-020-03395-2

Is Anopheles gambiae attraction to floral and human skin-based odours and their combination modulated by previous blood meal experience?
Cited by: 2
Author(s): ELISON ELIEZA KEMIBALA, Agenor Mafra‐Neto, Jesse Saroli, Rodrigo Silva, Anitha Philbert, Kija Ng’habi, Woodbridge A. Foster, Teun Dekker, Leonard E. G. Mboera
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.58910

S-phase-independent silencing establishment in Saccharomyces cerevisiae
Cited by: 16
Author(s): Davis Goodnight, Jasper Rine
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0179713

Effects of iron supplementation on growth, gut microbiota, metabolomics and cognitive development of rat pups
Cited by: 21
Author(s): Erica E. Alexeev, Xuan He, Carolyn M. Slupsky, Bo Lönnerdal
Software Mentions: 1
Published: almost 9 years ago

10.1089/ast.2016.1615

Replication of Simulated Prebiotic Amphiphilic Vesicles in a Finite Environment Exhibits Complex Behavior That Includes High Progeny Variability and Competition
Cited by: 7
Author(s): Don Armstrong, Doron Lancet, Raphael Zidovetzki
Software Mentions: 1
Published: about 8 years ago

10.1007/s00216-020-03031-7

Development and validation of a sensitive liquid chromatography tandem mass spectrometry assay for the simultaneous determination of ten kinase inhibitors in human serum and plasma
Cited by: 26
Author(s): Fatemeh Aghai, Sebastian Zimmermann, Max Kurlbaum, Pius Jung, Theo Pelzer, Hartwig Klinker, Nora Isberner, Susan Oliver
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-016-3062-y

Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes
Cited by: 4
Author(s): Kátia de Paiva Lopes, Francisco J. Campos‐Laborie, Ricardo Assunção Vialle, José Miguel Ortega, Javier De Las Rivas
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-018-37768-0

Bioinformatics Analysis of Metabolism Pathways of Archaeal Energy Reserves
Cited by: 22
Author(s): Liang Wang, Qinghua Liu, Xiang Wu, Yue Huang, Michael J. Wise, Zhanzhong Liu, Wei Wang, Jian Hu, Qianqian Wang
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.62648

Distinct clonal evolution of B-cells in HIV controllers with neutralizing antibody breadth
Cited by: 10
Author(s): Deniz Cizmeci, Giuseppe Lofano, Evan Rossignol, Anne‐Sophie Dugast, Dongkyoon Kim, Guy Cavet, Ngan Thi Kim Nguyen, Yann Chong Tan, Michael S. Seaman, Galit Alter, Boris Jülg
Software Mentions: 1
Published: about 5 years ago

10.1186/s12936-019-2913-9

Using a miniaturized double-net trap (DN-Mini) to assess relationships between indoor–outdoor biting preferences and physiological ages of two malaria vectors, Anopheles arabiensis and Anopheles funestus
Cited by: 25
Author(s): Alex J. Limwagu, Emmanuel W. Kaindoa, Halfan S. Ngowo, Emmanuel E. Hape, Marceline Finda, Gustav Mkandawile, Japhet Kihonda, Khamis Kifungo, Rukiyah M. Njalambaha, Damaris Matoke-Muhia, Fredros O. Okumu
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-38274-z

IPSE, a urogenital parasite-derived immunomodulatory protein, ameliorates ifosfamide-induced hemorrhagic cystitis through downregulation of pro-inflammatory pathways
Cited by: 15
Author(s): Evaristus C. Mbanefo, Liu Le, Rebecca Zee, Nirad Banskota, Kenji Ishida, Luke F. Pennington, Justin I. Odegaard, Theodore S. Jardetzky, Abdulaziz Alouffi, Franco H. Falcone, Michael H. Hsieh
Software Mentions: 1
Published: over 7 years ago

10.1186/s12885-020-07523-8

microRNA-451a promoter methylation regulated by DNMT3B expedites bladder cancer development via the EPHA2/PI3K/AKT axis
Cited by: 10
Author(s): Beibei Liu, Wei Sun, Wuyue Gao, Liqiang Li, Zhenxue Cao, Xiaohuai Yang, Jianmin Liu, Yuanyuan Guo
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.02415

Conversion of Methionine to Cysteine in Lactobacillus paracasei Depends on the Highly Mobile cysK-ctl-cysE Gene Cluster
Cited by: 8
Author(s): Daniel Wüthrich, Stefan Irmler, Hélène Berthoud, Barbara Guggenbühl, Elisabeth Eugster, Rémy Bruggmann
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0189271

Transcriptional profiling of sugarcane leaves and roots under progressive osmotic stress reveals a regulated coordination of gene expression in a spatiotemporal manner
Cited by: 25
Author(s): Alejandro Pereira-Santana, Edyciel J. Alvarado-Robledo, Jesús Alejandro Zamora‐Briseño, Jorge Tonatiuh Ayala-Sumuano, Víctor M. González-Mendoza, Francisco Espadas-Gil, Luis David Alcaraz, Enrique Castaño, Miguel A. Keb-Llanes, Lorenzo Felipe Sánchez Teyer, Luis Carlos Rodríguez-Zapata
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-019-38538-2

The genetic and epigenetic association of LDL Receptor Related Protein 1B (LRP1B) gene with childhood obesity
Cited by: 7
Author(s): Suman Lee
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-38127-9

In-Depth Characterization of Monocyte-Derived Macrophages using a Mass Cytometry-Based Phagocytosis Assay
Cited by: 101
Author(s): Daniel Schulz, Yannik Severin, Vito Riccardo Tomaso Zanotelli, Bernd Bodenmiller
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-38713-5

Urinary proteome signature of Renal Cysts and Diabetes syndrome in children
Cited by: 15
Author(s): P Ricci, Pedro Magalhães, Magdalena Krochmal, Martin Pejchinovski, Erica Daina, Maria Rosa Caruso, Laura Goea, Iwona Belczacka, Giuseppe Remuzzi, Muriel Umbhauer, Jens Drube, Lars Pape, Harald Mischak, Stéphane Decramer, Franz Schaefer, Joost P. Schanstra, Silvia Cereghini, Petra Zürbig
Software Mentions: 1
Published: over 7 years ago

10.3389/fmed.2021.663396

HLA Variants and Inhibitor Development in Hemophilia A: A Retrospective Case-Controlled Study Using the ATHNdataset
Cited by: 4
Author(s): Joseph R. McGill, Vijaya L. Simhadri, Zuben E. Sauna
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0155046

A European Mitochondrial Haplotype Identified in Ancient Phoenician Remains from Carthage, North Africa
Cited by: 23
Author(s): Elizabeth Matisoo-Smith, Anna L. Gosling, James Boocock, Olga Kardailsky, Yara Kurumilian, Sihem Roudesli‐Chebbi, Leila Badre, Jean-Paul Morel, Leïla Ladjimi Sebaï, Pierre Zalloua
Software Mentions: 1
Published: about 10 years ago

10.1186/s12936-015-0710-7

In vivo efficacy of sulphadoxine-pyrimethamine for the treatment of asymptomatic parasitaemia in pregnant women in Machinga District, Malawi
Cited by: 11
Author(s): Julie Gutman, Dyson Mwandama, Ryan E. Wiegand, Joseph F. Abdallah, Nnaemeka C. Iriemenam, Ya Ping Shi, Don P. Mathanga, Jacek Skarbinski
Software Mentions: 1
Published: about 11 years ago

10.3390/nu11020300

Passive Commuting and Higher Sedentary Time Is Associated with Vitamin D Deficiency in Adult and Older Women: Results from Chilean National Health Survey 2016–2017
Cited by: 20
Author(s): Patricio Solís-Urra, Carlos Cristi-Montero, Javier Romero-Parra, Juan Pablo Zavala-Crichton, María José Sáez-Lara, Julio Plaza‐Díaz
Software Mentions: 1
Published: over 7 years ago

10.4269/ajtmh.18-0018

Impact of Ivermectin Mass Drug Administration for Lymphatic Filariasis on Scabies in Eight Villages in Kongwa District, Tanzania
Cited by: 19
Author(s): Diana L. Martin, Ryan E. Wiegand, Brook Goodhew, Patrick J. Lammie, Harran Mkocha, Mabula Kasubi
Software Mentions: 1
Published: over 7 years ago

10.1002/evl3.112

Response to Perrier and Charmantier: On the importance of time scales when studying adaptive evolution
Cited by: 1
Author(s): Mirte Bosse, Lewis G. Spurgin, Veronika N. Laine, Ella F. Cole, Josh A. Firth, Phillip Gienapp, Andrew Gosler, Keith McMahon, Jocelyn Poissant, Irene Verhagen, M.A.M. Groenen, Kees van Oers, Ben C. Sheldon, Marcel E. Visser, Jon Slate
Software Mentions: 1
Published: about 7 years ago

10.1242/dev.165068

Hedgehog signaling regulates cell motility and optic fissure and stalk formation during vertebrate eye morphogenesis
Cited by: 31
Author(s): Hannah B. Gordon, Sarah Lusk, Keith R. Carney, Emily O. Wirick, Brooke Froelich Murray, Kristen M. Kwan
Software Mentions: 1
Published: over 8 years ago

10.1186/s12936-016-1313-7

Diversity-oriented natural product platform identifies plant constituents targeting Plasmodium falciparum
Cited by: 4
Author(s): Jin Zhang, John J. Bowling, David C. Smithson, Julie Clark, Melissa R. Jacob, Shabana I. Khan, Babu L. Tekwani, Michele Connelly, Volodymyr Samoylenko, Mohamed A. Ibrahim, Mohamed A. Zaki, Mei Wang, John P. Hester, Ying Tu, Cynthia Jeffries, Nathaniel Twarog, Anang A. Shelat, Larry Walker, Ilias Muhammad, R. Kiplin Guy
Software Mentions: 1
Published: about 10 years ago

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