cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3389/fimmu.2020.00033

Molecular Signatures of Neuroinflammation Induced by αSynuclein Aggregates in Microglial Cells
Cited by: 47
Author(s): Satyapriya Sarkar, Eric B. Dammer, Emir Malovic, Abby L. Olsen, Syed Ali Raza, Tianwen Gao, Hailian Xiao, Danielle Oliver, Duc M. Duong, Valerie Joers, Nicholas T. Seyfried, Meixiang Huang, Thomas Kukar, Malú G. Tansey, Anumantha G. Kanthasamy, Srikant Rangaraju
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2021.615102

Functional Profiling of Antibody Immune Repertoires in Convalescent Zika Virus Disease Patients
Cited by: 12
Author(s): Ahmed S. Fahad, Morgan R. Timm, Bharat Madan, Katherine E. Burgomaster, Kimberly A. Dowd, Erica Normandin, Matías Gutiérrez-González, Joseph M. Pennington, Matheus Oliveira de Souza, Amy R. Henry, Farida Laboune, Lingshu Wang, David R. Ambrozak, Ingelise J. Gordon, Daniel C. Douek, Julie E. Ledgerwood, Barney S. Graham, Leda R. Castilho, Theodore C. Pierson, John R. Mascola, Brandon J. DeKosky
Software Mentions: 2
Published: over 5 years ago

10.1172/jci.insight.149217

A map of metabolic phenotypes in patients with myalgic encephalomyelitis/chronic fatigue syndrome
Cited by: 15
Author(s): Fredrik Hoel, August Hoel, Ina Katrine Nitschke Pettersen, Ingrid Gurvin Rekeland, Kristin Risa, Kine Alme, Kari Sørland, Alexander Fosså, Katarina Lien, Ingrid Herder, Hanne Thürmer, Merethe Otelie Eide Gotaas, Christoph Schäfer, Rolf K. Berge, Kristian Sommerfelt, Hans-Peter Marti, Olav Dahl, Olav Mella, Øystein Fluge, Karl Johan Tronstad
Software Mentions: 2
Published: almost 5 years ago

10.3390/foods9020119

Growth Behavior of Listeria monocytogenes in a Traditional Norwegian Fermented Fish Product (Rakfisk), and Its Inhibition through Bacteriophage Addition
Cited by: 17
Author(s): Lars Axelsson, Guro alette Bjerke, Anette McLeod, Ingunn Berget, Askild Lorentz Holck
Software Mentions: 2
Published: over 6 years ago

10.3389/fimmu.2020.02085

The Immunologic Effect of Early Intravenous Two and Four Gram Bolus Dosing of Tranexamic Acid Compared to Placebo in Patients With Severe Traumatic Bleeding (TAMPITI): A Randomized, Double-Blind, Placebo-Controlled, Single-Center Trial
Cited by: 20
Author(s): Philip C. Spinella, Kimberly A. Thomas, Isaiah R. Turnbull, Anja Fuchs, Kelly Bochicchio, Douglas Schuerer, Stacey Reese, Adrian A Coleoglou Centeno, Christopher B. Horn, Jack Baty, Susan M. Shea, Michael Adam Meledeo, Anthony E. Pusateri, Jerrold H. Levy, P. Andrew, Grant V. Bochicchio, Tampiti Investigators
Software Mentions: 2
Published: almost 6 years ago

10.1172/jci.insight.140364

Lenvatinib halts aortic aneurysm growth by restoring smooth muscle cell contractility
Cited by: 11
Author(s): Albert Busch, Jessica Pauli, Greg Winski, Sonja Bleichert, Ekaterina Chernogubova, Susanne Metschl, Hanna Winter, Matthias Trenner, Armin Wiegering, Christoph Otto, Johannes Fischer, Judith Reiser, Julia Werner, Joy Roy, Christine Brostjan, Christoph Knappich, Hans‐Henning Eckstein, Valentina Paloschi, Lars Maegdefessel
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-021-84984-2

Telomere attrition rates are associated with weather conditions and predict productive lifespan in dairy cattle
Cited by: 12
Author(s): Luise A. Seeker, Sarah Underwood, Rachael V. Wilbourn, Jennifer Dorrens, Hannah Froy, Rebecca Holland, Joanna J. Ilska, Androniki Psifidi, Ainsley Bagnall, Bruce Whitelaw, Mike Coffey, Georgios Banos, Daniel H. Nussey
Software Mentions: 2
Published: over 5 years ago

10.3390/foods10081904

Application of Raw and Defatted by Supercritical CO2 Hemp Seed Press-Cake and Sweet Grass Antioxidant Extract in Pork Burger Patties
Cited by: 6
Author(s): Kristi Kerner, Ivi Jõudu, A. Tänavots, Petras Rimantas Venskutonis
Software Mentions: 2
Published: almost 5 years ago

10.3389/fimmu.2021.617316

Evaluation of Combination Strategies for the A2AR Inhibitor AZD4635 Across Tumor Microenvironment Conditions via a Systems Pharmacology Model
Cited by: 9
Author(s): Veronika Voronova, Kirill Peskov, Yuri Kosinsky, Gabriel Helmlinger, Lulu Chu, Alexandra Borodovsky, Richard Woessner, Kris F. Sachsenmeier, Wenlin Shao, Rakesh Kumar, Gayle P. Pouliot, Melinda S. Merchant, Holly Kimko, Ganesh Mugundu
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pntd.0005420

Single locus genotyping to track Leishmania donovani in the Indian subcontinent: Application in Nepal
Cited by: 16
Author(s): Keshav Rai, Narayan Bhattarai, Manu Vanaerschot, Hideo Imamura, Gebreyohans Gebru, Basudha Khanal, Suman Rijal, Marleen Boelaert, Chiranjib Pal, Prahlad Karki, Jean‐Claude Dujardin
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-021-85825-y

Time spent outdoors in childhood is associated with reduced risk of myopia as an adult
Cited by: 32
Author(s): Gareth Lingham, Seyhan Yazar, Robyn Lucas, Elizabeth Milne, Alex W. Hewitt, Christopher J Hammond, Stuart MacGregor, Kathryn A. Rose, Fred K. Chen, Mingguang He, Jeremy A. Guggenheim, Michael Clarke, Seang Mei Saw, Cathy Williams, Minas T. Coroneo, Leon Straker, David A. Mackey
Software Mentions: 2
Published: over 5 years ago

10.1016/j.jaci.2017.08.044

Biallelic interferon regulatory factor 8 mutation: A complex immunodeficiency syndrome with dendritic cell deficiency, monocytopenia, and immune dysregulation
Cited by: 56
Author(s): Venetia Bigley, Sheetal Maisuria, Urszula Cytlak, Laura Jardine, Matthew A. Care, Kile Green, Merry Gunawan, Paul Milne, Rachel Dickinson, Sarah Wiscombe, David Parry, Rainer Döffinger, Arian Laurence, Claudia Fonseca, Oda Stoevesandt, Andrew R. Gennery, Andrew J. Cant, Reuben Tooze, A. John Simpson, Sophie Hambleton, Sinisa Savic, Gina M. Doody, Matthew Collin
Software Mentions: 2
Published: about 8 years ago

10.1016/j.cell.2018.02.030

Multiplexed Proteome Dynamics Profiling Reveals Mechanisms Controlling Protein Homeostasis
Cited by: 174
Author(s): Mikhail M. Savitski, Nico Zinn, Maria Faelth-Savitski, Daniel Poeckel, Stephan Gade, Isabelle Becher, Marcel Muelbaier, Anne J. Wagner, Katrin Strohmer, Thilo Werner, Stephanie Melchert, Massimo Petretich, Anna Rutkowska, Johanna Vappiani, Holger Franken, Michael Steidel, Gavain Sweetman, Omer Gilan, Enid Y.N. Lam, Mark A. Dawson, Rab K. Prinjha, Paola Grandi, Giovanna Bergamini, Marcus Bantscheff
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pntd.0005347

Dispersal of male and female Culex quinquefasciatus and Aedes albopictus mosquitoes using stable isotope enrichment
Cited by: 61
Author(s): Matthew C. I. Medeiros, Emily Cale Boothe, E. Brendan Roark, Gabriel L. Hamer
Software Mentions: 2
Published: over 9 years ago

10.7554/eLife.63907

A cell atlas of the chick retina based on single-cell transcriptomics
Cited by: 66
Author(s): Masahito Yamagata, Wenjun Yan, Joshua R. Sanes
Software Mentions: 2
Published: over 5 years ago

10.7554/eLife.54097

A survey-based analysis of the academic job market
Cited by: 29
Author(s): Jason D Fernandes, Sarvenaz Sarabipour, Christopher T. Smith, Natalie M. Niemi, Nafisa M. Jadavji, Ariangela J. Kozik, Alex S. Holehouse, Vikas Pejaver, Orsolya Symmons, Alexandre W. Bisson‐Filho, Amanda Haage
Software Mentions: 2
Published: about 6 years ago

10.1186/s12879-021-06142-3

A case report of endocarditis and spondylitis caused by Brucella melitensis biovar 3
Cited by: 5
Author(s): Huan Zhang, Sheng‐Xue Xie, Yue-Li Wang, Xiaoli Zhao, Jihai Yi, Zhen Wang, Qi Liu, Xiaoyu Deng, Bingjie Li, Buyun Cui, Yuanzhi Wang, Chuangfu Chen
Software Mentions: 2
Published: about 5 years ago

10.1007/s13361-015-1269-9

High Resolution Mass Spectrometry of Polyfluorinated Polyether-Based Formulation
Cited by: 36
Author(s): Ian Ken D. Dimzon, Xenia Trier, Tobias Frömel, Rick Helmus, Thomas P. Knepper, P. de Voogt
Software Mentions: 2
Published: over 10 years ago

10.3390/biology10060460

Bone Diagenesis in Short Timescales: Insights from an Exploratory Proteomic Analysis
Cited by: 11
Author(s): Noemi Procopio, Caley Mein, Sefora Starace, Andrea Bonicelli, Anna Williams
Software Mentions: 2
Published: about 5 years ago

10.3390/cancers11020172

Potential Applications of DNA, RNA and Protein Biomarkers in Diagnosis, Therapy and Prognosis for Colorectal Cancer: A Study from Databases to AI-Assisted Verification
Cited by: 24
Author(s): Xueli Zhang, Xiao‐Feng Sun, Bairong Shen, Hong Zhang
Software Mentions: 2
Published: over 7 years ago

10.3389/fimmu.2021.665442

Gene Expression Profiles Analyzed Using Integrating RNA Sequencing, and Microarray Reveals Increased Inflammatory Response, Proliferation, and Osteoclastogenesis in Pigmented Villonodular Synovitis
Cited by: 7
Author(s): Yang Zhao, Jiaoyun Lv, Hongwei Zhang, Jiawei Xie, Hui Dai, Xin Zhang
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-021-86217-y

Protein cleavage influences surface protein presentation in Mycoplasma pneumoniae
Cited by: 4
Author(s): Iain J. Berry, Michael Widjaja, Veronica M. Jarocki, Joel R. Steele, Matthew P. Padula, Steven P. Djordjevic
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-021-85993-x

Mining The Cancer Genome Atlas gene expression data for lineage markers in distinguishing bladder urothelial carcinoma and prostate adenocarcinoma
Cited by: 2
Author(s): Ewe Seng Ch’ng
Software Mentions: 2
Published: about 5 years ago

10.3390/cancers12113361

A Pilot Study Comparing the Efficacy of Lactate Dehydrogenase Levels Versus Circulating Cell-Free microRNAs in Monitoring Responses to Checkpoint Inhibitor Immunotherapy in Metastatic Melanoma Patients
Cited by: 21
Author(s): Matías A. Bustos, Rebecca Groß, Negin Rahimzadeh, Hunter Cole, Linh Thanh Tran, Kevin Tran, Ling Takeshima, Stacey L. Stern, Steven O’Day, Dave S. B. Hoon
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pntd.0007570

Dramatic changes in gene expression in different forms of Crithidia fasciculata reveal potential mechanisms for insect-specific adhesion in kinetoplastid parasites
Cited by: 13
Author(s): John N. Filosa, Corbett T. Berry, Gordon Ruthel, Stephen M. Beverley, Wesley C. Warren, Chad Tomlinson, Peter J. Myler, Elizabeth A. Dudkin, Megan L. Povelones, Michael Povelones
Software Mentions: 2
Published: almost 7 years ago

10.3390/foods9060797

Effect of Biofilm Formation by Lactobacillus plantarum on the Malolactic Fermentation in Model Wine
Cited by: 16
Author(s): Gianfranco Pannella, Silvia Jane Lombardi, Francesca Coppola, Franca Vergalito, Massimo Iorizzo, Mariantonietta Succi, Patrizio Tremonte, C. Iannini, Elena Sorrentino, Raffaele Coppola
Software Mentions: 2
Published: about 6 years ago

10.1186/s40104-020-0427-5

Dynamic alterations in early intestinal development, microbiota and metabolome induced by in ovo feeding of L-arginine in a layer chick model
Cited by: 24
Author(s): Dong Dai, Shu‐geng Wu, Haijun Zhang, Guang‐hai Qi, Jing Wang
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-021-86349-1

Genome-wide transcriptome study in skin biopsies reveals an association of E2F4 with cadasil and cognitive impairment
Cited by: 5
Author(s): Elena Muiño, Olga Maisterra, Joan Jiménez-Baladó, Natàlia Cullell, Caty Carrera, Nuria P. Torres-Águila, Jara Cárcel‐Márquez, Cristina Gallego-Fábrega, Miquel Lledós, Jonathan González-Sánchez, Ferran Olmos‐Alpiste, Eva Espejo, Álvaro March, Ramón M. Pujol, Ana Rodríguez-Campello, Gemma Romeral, Jurek Krupinski, Joan Martí‐Fàbregas, Joan Montaner, Jaume Roquer, Israel Fernández‐Cadenas
Software Mentions: 2
Published: about 5 years ago

10.3389/fimmu.2015.00606

DNP-KLH Yields Changes in Leukocyte Populations and Immunoglobulin Isotype Use with Different Immunization Routes in Zebrafish
Cited by: 10
Author(s): Heather Weir, Patricia L. Chen, Thaddeus C. Deiss, Natalie Jacobs, Mary B. Nabity, Matt Young, Michael F. Criscitiello
Software Mentions: 2
Published: over 10 years ago

10.3390/bs11040051

Cognition across the Lifespan: Investigating Age, Sex, and Other Sociodemographic Influences
Cited by: 8
Author(s): Emily S. Nichols, Conor Wild, Adrian M. Owen, Andrea Soddu
Software Mentions: 2
Published: about 5 years ago

10.1093/bioinformatics/bty614

Approximate, simultaneous comparison of microbial genome architectures via syntenic anchoring of quiver representations
Cited by: 5
Author(s): Alex N. Salazar, Thomas Abeel
Software Mentions: 2
Published: almost 8 years ago

10.3389/fcell.2020.629030

Dynamic Expression of m6A Regulators During Multiple Human Tissue Development and Cancers
Cited by: 8
Author(s): Ya Zhang, Sicong Xu, Gang Xu, Yueying Gao, Si Li, Ke Zhang, Zhanyu Tian, Jing Guo, Xia Li, Juan Xu, Yongsheng Li
Software Mentions: 2
Published: over 5 years ago

10.3390/foods10040864

Phenolic Content and Antioxidant Activity in Seeds of Common Bean (Phaseolus vulgaris L.)
Cited by: 23
Author(s): Roberto Rodríguez Madrera, Ana Čampa, Belén Suárez Valles, Juan José Ferreira Fernández
Software Mentions: 2
Published: about 5 years ago

10.1038/ja.2017.78

Insight into synergetic mechanisms of tetracycline and the selective serotonin reuptake inhibitor, sertraline, in a tetracycline-resistant strain of Escherichia coli
Cited by: 24
Author(s): Lili Li, Sofie Kromann, John Elmerdahl Olsen, Søren Wedel Svenningsen, Rikke Heidemann Olsen
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pgen.1006993

Fibroblast growth factor signaling is required for early somatic gonad development in zebrafish
Cited by: 53
Author(s): Dena M. Leerberg, Kōkichi Sano, Bruce W. Draper
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-021-86667-4

The dynamic association between body mass index and cognition from midlife through late-life, and the effect of sex and genetic influences
Cited by: 13
Author(s): Ida Karlsson, Margaret Gatz, Thalida Em Arpawong, Anna K. Dahl Aslan, Chandra A. Reynolds
Software Mentions: 2
Published: about 5 years ago

10.3758/s13428-020-01527-9

Samply: A user-friendly smartphone app and web-based means of scheduling and sending mobile notifications for experience-sampling research
Cited by: 9
Author(s): Yury Shevchenko, Tim Kuhlmann, Ulf‐Dietrich Reips
Software Mentions: 2
Published: over 5 years ago

10.1093/bioinformatics/btw325

GenVisR: Genomic Visualizations in R
Cited by: 220
Author(s): Zachary L. Skidmore, Alex H. Wagner, Robert Lesurf, Katie M. Campbell, Jason Kunisaki, Obi L. Griffith
Software Mentions: 2
Published: about 10 years ago

10.1007/s10646-019-02128-9

Historical control data for the interpretation of ecotoxicity data: are we missing a trick?
Cited by: 15
Author(s): Amy Brooks, Manousos Foudoulakis, Hanna S. Schuster, James R. Wheeler
Software Mentions: 2
Published: over 6 years ago

10.1186/1471-2334-14-136

How should social mixing be measured: comparing web-based survey and sensor-based methods
Cited by: 62
Author(s): Timo Smieszek, Victoria C Barclay, Indulaxmi Seeni, Jeanette J. Rainey, Hongjiang Gao, Amra Uzicanin, Marcel Salathé
Software Mentions: 2
Published: over 12 years ago

10.1038/s41598-021-86578-4

DNMT3.1 controls trade-offs between growth, reproduction, and life span under starved conditions in Daphnia magna
Cited by: 4
Author(s): Nhan Duc Nguyen, Tomoaki Matsuura, Yasuhiko Kato, Hidenobu Watanabe
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pgen.1002525

Mixed Effects Modeling of Proliferation Rates in Cell-Based Models: Consequence for Pharmacogenomics and Cancer
Cited by: 29
Author(s): Hae Kyung Im, Eric R. Gamazon, Amy L. Stark, R. Stephanie Huang, Nancy J. Cox, M. Eileen Dolan
Software Mentions: 2
Published: over 14 years ago

10.3390/cancers11101485

Unraveling the Heterogeneous Mutational Signature of Spontaneously Developing Tumors in MLH1−/− Mice
Cited by: 7
Author(s): Yvonne Saara Gladbach, Leonie Wiegele, Mohamed Hamed, Anna-Marie Merkenschläger, Georg Fuellen, Christian Junghanß, Claudia Maletzki
Software Mentions: 2
Published: over 6 years ago

10.1002/ecy.2568

Comparison of large‐scale citizen science data and long‐term study data for phenology modeling
Cited by: 28
Author(s): Shawn D. Taylor, Joan M. Meiners, Kristina Riemer, Michael C. Orr, Ethan White
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-34267-0

Genome-wide patterns of local adaptation in Western European Drosophila melanogaster natural populations
Cited by: 20
Author(s): Lídia Mateo, Gabriel E. Rech
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-35074-3

Geographical and temporal distribution of the residual clusters of human leptospirosis in China, 2005–2016
Cited by: 16
Author(s): Pandji Wibawa Dhewantara, Abdullah Al Mamun, Wenyi Zhang, Wenwu Yin, Fan Ding, Danhuai Guo, Wenbiao Hu, Ricardo J. Soares Magalhães
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pgen.1008125

The evolution of hybrid fitness during speciation
Cited by: 53
Author(s): Andrius J. Dagilis, Mark Kirkpatrick, Daniel I. Bolnick
Software Mentions: 2
Published: about 7 years ago

10.1002/ece3.7735

The impact of climate change on western Plethodon salamanders’ distribution
Cited by: 9
Author(s): Sir Nottingham, Tara A. Pelletier
Software Mentions: 2
Published: almost 5 years ago

10.1098/rsos.210140

Characterization of the RNA-interference pathway as a tool for reverse genetic analysis in the nascent phototrophic endosymbiosis, Paramecium bursaria
Cited by: 5
Author(s): Benjamin H. Jenkins, Finlay Maguire, Guy Leonard, Joshua D. Eaton, Steven West, Benjamin E. Housden, David S. Milner, Thomas A. Richards
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pgen.1009082

Disentangling the determinants of transposable elements dynamics in vertebrate genomes using empirical evidences and simulations
Cited by: 14
Author(s): Yann Bourgeois, Robert P. Ruggiero, Imtiyaz Hariyani, Stéphane Boissinot
Software Mentions: 2
Published: over 5 years ago

10.3390/cancers11071031

GNAQ Q209R Mutations Are Highly Specific for Circumscribed Choroidal Hemangioma
Cited by: 13
Author(s): Claudia H D Le Guin, K. Metz, Stefan Kreis, Nikolaos E. Bechrakis, Norbert Bornfeld, Michael Zeschnigk, Dietmar Lohmann
Software Mentions: 2
Published: almost 7 years ago

10.3389/fbioe.2019.00236

Identification of Ixodid Tick-Specific Aquaporin-1 Potential Anti-tick Vaccine Epitopes: An in-silico Analysis
Cited by: 12
Author(s): Christian Ndekezi, Joseph Nkamwesiga, Sylvester Ochwo, Magambo Phillip Kimuda, Frank Norbert Mwiine, Robert Tweyongyere, Wilson Amanyire, Dennis Muhanguzi
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-021-87480-9

Humans rely more on algorithms than social influence as a task becomes more difficult
Cited by: 24
Author(s): Eric Bogert, Aaron Schecter, Richard T. Watson
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-021-87542-y

The application of ozonated water rearranges the Vitis vinifera L. leaf and berry transcriptomes eliciting defence and antioxidant responses
Cited by: 8
Author(s): Ana Campayo, Stefania Savoi, Charles Romieu, Alberto José López-Jiménez, Kortes Serrano de la Hoz, M. Rosario Salinas, Laurent Torregrosa, Gonzalo L. Alonso
Software Mentions: 2
Published: about 5 years ago

10.1093/bioinformatics/bty832

A systematic method for surveying data visualizations and a resulting genomic epidemiology visualization typology: GEViT
Cited by: 11
Author(s): Anamaria Crisan, Jennifer L. Gardy, Tamara Munzner
Software Mentions: 2
Published: over 7 years ago

10.1093/beheco/arw119

Exploration is dependent on reproductive state, not social state, in a cooperatively breeding bird
Cited by: 5
Author(s): Hannah A. Edwards, Hannah L. Dugdale, David S. Richardson, Jan Komdeur, Terry Burke
Software Mentions: 2
Published: almost 10 years ago

10.1038/s41598-021-87464-9

Levels of pathogen virulence and host resistance both shape the antibody response to an emerging bacterial disease
Cited by: 2
Author(s): Daisy Gates, Molly Staley, Luc Tardy, Mathieu Giraudeau, Geoffrey E. Hill, Kevin J. McGraw, Camille Bonneaud
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-021-87681-2

High-throughput enrichment and isolation of megakaryocyte progenitor cells from the mouse bone marrow
Cited by: 5
Author(s): Lucas M. Bush, Connor P. Healy, James Marvin, Tara L. Deans
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.5951

Butterfly phenology in Mediterranean mountains using space‐for‐time substitution
Cited by: 7
Author(s): Konstantina Zografou, Andrea Grill, Robert J. Wilson, John M. Halley, George C. Adamidis, Vassiliki Kati
Software Mentions: 2
Published: over 6 years ago

10.3390/cancers13092061

Structural Bases for the Synergistic Inhibition of Human Thymidylate Synthase and Ovarian Cancer Cell Growth by Drug Combinations
Cited by: 1
Author(s): Cecilia Pozzi, Matteo Santucci, Gaetano Marverti, Domenico D’Arca, Lorenzo Tagliazucchi, Stefania Ferrari, Gaia Gozzi, Lorena Losi, Giusy Tassone, Stefano Mangani, Glauco Ponterini, Maria Paola Costi
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.8005

Sublethal effects of a rapidly spreading native alga on a key herbivore
Cited by: 1
Author(s): Daniel Bradley, Jordi Boada, William Ewart Gladstone, Tim M. Glasby, Paul E. Gribben
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-018-36575-x

Analysis of genetic diversity of Xanthomonas oryzae pv. oryzae populations in Taiwan
Cited by: 10
Author(s): Chih‐Cheng Chien, Mei-Yi Chou, Chun-Yi Chen, Ming-Che Shih
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-36518-6

Forming social impressions from voices in native and foreign languages
Cited by: 23
Author(s): Cristina Baus, Phil McAleer, Katherine Marcoux, Pascal Belin, Albert Costa
Software Mentions: 2
Published: over 7 years ago

10.3390/cancers13061237

Mast Cell-Derived SAMD14 Is a Novel Regulator of the Human Prostate Tumor Microenvironment
Cited by: 9
Author(s): Linda Teng, Brooke A. Pereira, Shivakumar Keerthikumar, Cheng Huang, Birunthi Niranjan, Sophie N. Lee, Michelle Richards, Ralf B. Schittenhelm, Luc Furic, David Goode, Mitchell G. Lawrence, Renea A. Taylor, Stuart John Ellem, Gail P. Risbridger, Natalie Lister
Software Mentions: 2
Published: over 5 years ago

10.1098/rsos.210163

Past thermal conditions affect hunting behaviour in larval antlions
Cited by: 7
Author(s): Krzysztof Miler, Marcin Czarnołęski
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.4098

Insights from modeling studies on how climate change affects invasive alien species geography
Cited by: 112
Author(s): Céline Bellard, Jonathan M. Jeschke, Boris Leroy, Georgina M. Mace
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pgen.1004438

Introgression from Domestic Goat Generated Variation at the Major Histocompatibility Complex of Alpine Ibex
Cited by: 80
Author(s): Christine Grossen, Lukas F. Keller, Iris Biebach, Daniel Croll
Software Mentions: 2
Published: about 12 years ago

10.1038/s41598-021-87999-x

Transcriptome analysis of upland cotton revealed novel pathways to scavenge reactive oxygen species (ROS) responding to Na2SO4 tolerance
Cited by: 5
Author(s): Qinqin Wang, Xuke Lu, Xiugui Chen, Waqar Afzal Malik, Delong Wang, Lingxia Zhao, Junjuan Wang, Shuai Wang, Lixue Guo, Ruifeng Cui, Mingge Han, Cun Rui, Yuexin Zhang, Yapeng Fan, Chao Chen, Wuwei Ye
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-37294-z

STAT3 is activated in multicellular spheroids of colon carcinoma cells and mediates expression of IRF9 and interferon stimulated genes
Cited by: 7
Author(s): Elin Edsbäcker, Jason T. Serviss, Iryna Kolosenko, Caroline Palm-Apergi, Angelo De Milito, Katja Pokrovskaja Tamm
Software Mentions: 2
Published: over 7 years ago

10.3389/fbioe.2020.00607

High-Throughput Screen for Cell Wall Synthesis Network Module in Mycobacterium tuberculosis Based on Integrated Bioinformatics Strategy
Cited by: 1
Author(s): Xizi Luo, Jiahui Pan, Qingyu Meng, Juanjuan Huang, Wenfang Wang, Nan Zhang, Guoqing Wang
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-021-88171-1

Projected effects of ocean warming on an iconic pelagic fish and its fishery
Cited by: 1
Author(s): Vicenç Moltó, Miquel Palmer, Andrés Ospina-Álvarez, Sílvia Pérez-Mayol, Amina Besbes Benseddik, Mark Gatt, Beatriz Morales‐Nin, Francisco Alemany, Ignacio Alberto Catalán
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pgen.1005096

Examining the Evolution of the Regulatory Circuit Controlling Secondary Metabolism and Development in the Fungal Genus Aspergillus
Cited by: 65
Author(s): Abigail Lind, Jennifer H. Wisecaver, Timothy D. Smith, Xuehuan Feng, Ana M. Calvo, Antonis Rokas
Software Mentions: 2
Published: over 11 years ago

10.3389/fimmu.2017.01227

IFNγ Enhances CD64-Potentiated Phagocytosis of Treponema pallidum Opsonized with Human Syphilitic Serum by Human Macrophages
Cited by: 30
Author(s): Kelly L. Hawley, Adriana R. Cruz, Sarah Benjamin, Carson J. La Vake, Jorge Cervantes, Morgan LeDoyt, Lady G. Ramirez, Daniza Mandich, Mary Fiel-Gan, Melissa J. Caimano, Justin D. Radolf, Juan C. Salazar
Software Mentions: 1
Published: over 8 years ago

10.1007/s10811-015-0631-4

Light and temperature effects on bioactivity in diatoms
Cited by: 83
Author(s): Richard Andre Ingebrigtsen, Espen Hansen, Jeanette Hammer Andersen, Hans Christian Eilertsen
Software Mentions: 1
Published: about 11 years ago

10.1007/s10803-019-04222-7

The Relation Between Autistic Traits, the Degree of Synaesthesia, and Local/Global Visual Perception
Cited by: 7
Author(s): Floor Burghoorn, Mark Dingemanse, Rob van Lier, Tessa M. van Leeuwen
Software Mentions: 1
Published: almost 7 years ago

10.1128/JB.00827-16

Growth Trade-Offs Accompany the Emergence of Glycolytic Metabolism in Shewanella oneidensis MR-1
Cited by: 13
Author(s): Lon M. Chubiz, Christopher J. Marx
Software Mentions: 1
Published: about 9 years ago

10.3390/biology10090821

Comparison of Behavior and Space Use of the European Bullhead Cottus gobio and the Round Goby Neogobius melanostomus in a Simulated Natural Habitat
Cited by: 2
Author(s): Sara Roje, Bořek Drozd, Luise Richter, Jan Kubec, Z. Polívka, Susanne Worischka, Miloš Buřič
Software Mentions: 1
Published: almost 5 years ago

10.1074/jbc.RA119.007730

Cross-reactivity of a rice NLR immune receptor to distinct effectors from the rice blast pathogen Magnaporthe oryzae provides partial disease resistance
Cited by: 27
Author(s): Freya A. Varden, Hiromasa Saitoh, Kae Yoshino, Marina Franceschetti, Sophien Kamoun, Ryohei Terauchi, Mark J. Banfield
Software Mentions: 1
Published: almost 7 years ago

10.3389/fimmu.2021.722027

Occurrence of COVID-19 Symptoms During SARS-CoV-2 Infection Defines Waning of Humoral Immunity
Cited by: 8
Author(s): Jun Wu, Boyun Liang, Yaohui Fang, Hua Wang, Xiaoli Yang, Shū Shěn, Liangkai Chen, Sumeng Li, Sihong Lu, Tiandan Xiang, Jia Liu, Vu Thuy Khanh Le‐Trilling, Mengji Lu, Dongliang Yang, Fei Deng, Ulf Dittmer, Mirko Trilling, Xin Zheng
Software Mentions: 1
Published: almost 5 years ago

10.1016/j.jbc.2021.100780

Genome-wide CRISPR screening reveals nucleotide synthesis negatively regulates autophagy
Cited by: 8
Author(s): Kaito Mimura, Jun-Ichi Sakamaki, Hideaki Morishita, Masahito Kawazu, Hiroyuki Mano, Noboru Mizushima
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jbc.2021.101175

Deamidation drives molecular aging of the SARS-CoV-2 spike protein receptor-binding motif
Cited by: 3
Author(s): Ramiro Lorenzo, Lucas A. Defelipe, Lucio Aliperti, Stephan Niebling, Tânia F. Custódio, Christian Löw, Jennifer Schwarz, Kim Remans, Patricio O. Craig, Lisandro H. Otero, S. Klinke, María García-Alai, Ignacio E. Sánchez, Leonardo G. Alonso
Software Mentions: 1
Published: over 4 years ago

10.1186/s40709-021-00133-w

Long‐term monitoring of common spadefoot toad activity in a European steppe using barn owl pellets
Cited by: 0
Author(s): Lukas Landler, Katharina Stefke
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2018.02133

Anaphylatoxin Receptors C3aR and C5aR1 Are Important Factors That Influence the Impact of Ethanol on the Adipose Secretome
Cited by: 20
Author(s): Rebecca L. McCullough, Megan R. McMullen, Kyle L. Poulsen, Adam Kim, M. Edward Medof, Laura E. Nagy
Software Mentions: 1
Published: over 7 years ago

10.1002/jbmr.3803

Mendelian Randomization Analysis Reveals a Causal Influence of Circulating Sclerostin Levels on Bone Mineral Density and Fractures
Cited by: 22
Author(s): Jie Zheng, Winfried Maerz, Ingrid Gergei, Marcus E. Kleber, Christiane Drechsler, Christoph Wanner, Vincent Brandenburg, Sjur Reppe, Kaare M. Gautvik, Carolina Medina‐Gomez, Enisa Shevroja, Arthur Gilly, Young‐Chan Park, George Dedoussis, Eleftheria Zeggini, Mattias Lorentzon, Petra Henning, Ulf H. Lerner, Karin Nilsson, Sofia Movérare‐Skrtic, Denis Baird, Benjamin Elsworth, Louise Falk, Alix Groom, Terence D. Capellini, Elin Grundberg, Maria Nethander, Claes Ohlsson, George Davey Smith, Jonathan H Tobias
Software Mentions: 1
Published: almost 7 years ago

10.18632/oncotarget.12705

ALK FISH patterns and the detection of ALK fusions by next generation sequencing in lung adenocarcinoma
Cited by: 58
Author(s): Sanja Đačić, Liza C. Villaruz, Shira Abberbock, Alyssa L. Mahaffey, Pimpin Incharoen, Marina N. Nikiforova
Software Mentions: 1
Published: over 9 years ago

10.7150/jca.35308

Circulating tumor cells as a new predictive and prognostic factor in patients with small cell lung cancer
Cited by: 33
Author(s): Peipei Wang, Sihong Liu, Cunte Chen, Lin Lv, Dan Li, Qiong-Yao Liu, Guo-Long Liu, Yong Wu
Software Mentions: 1
Published: over 6 years ago

10.7150/jca.40673

EXO1 Plays a Carcinogenic Role in Hepatocellular Carcinoma and is related to the regulation of FOXP3
Cited by: 11
Author(s): Guang Yang, Kai Dong, Zunyi Zhang, Erlei Zhang, Benjia Liang, Xiaoping Chen, Zhiyong Huang
Software Mentions: 1
Published: over 6 years ago

10.3390/biology9100316

Systematic Ancient DNA Species Identification Fails to Find Late Holocene Domesticated Cattle in Southern Africa
Cited by: 3
Author(s): K. Ann Horsburgh, Anna L. Gosling
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.652466

And Then There Were Three…: Extreme Regeneration Ability of the Solitary Chordate Polycarpa mytiligera
Cited by: 14
Author(s): Tal Gordon, Arnav Kumar Upadhyay, Lucia Manni, Dorothée Huchon, Noa Shenkar
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2020.618598

Secreted Phosphoprotein 1 Expression in Retinal Mononuclear Phagocytes Links Murine to Human Choroidal Neovascularization
Cited by: 20
Author(s): Anja Schlecht, Peipei Zhang, Julian Wolf, Adrian Thien, Dennis-Dominik Rosmus, Stefaniya Boneva, Günther Schlunck, Clemens Lange, Peter Wieghofer
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2020.601502

Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer
Cited by: 5
Author(s): Hantao Wang, Junjie Xing, Wei Wang, Gui‐Fen Lv, Haiyan He, Yeqing Lu, Mei Sun, Haiyan Chen, Xu Li
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.632183

Transcriptome and DNA Methylation Profiles of Mouse Fetus and Placenta Generated by Round Spermatid Injection
Cited by: 4
Author(s): Haibo Zhu, Hao Sun, Daren Yu, Tianda Li, Hai Tang, Chao Liu, Ying Zhang, Yurong Chen, Xiangpeng Dai, Ziyi Li, Wei Li, Ruizhi Liu, Guihai Feng, Qi Zhou
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.41279

Synthetic and genomic regulatory elements reveal aspects of cis-regulatory grammar in mouse embryonic stem cells
Cited by: 50
Author(s): Dana King, Clarice Kit Yee Hong, James Shepherdson, David M Granas, Brett Maricque, Barak A. Cohen
Software Mentions: 1
Published: over 6 years ago

10.3389/fcell.2020.616332

Genome-Scale CRISPR-Cas9 Transcriptional Activation Screening in Metformin Resistance Related Gene of Prostate Cancer
Cited by: 8
Author(s): Jiahong Chen, Yaqiang Huang, Zhenfeng Tang, Maozhang Li, Xuemei Ling, Jinxian Liao, Xiaobo Zhou, Shumin Fang, Haibo Zhao, Weide Zhong, Xia Yuan
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.660069

Zebrafish Cancer Predisposition Models
Cited by: 11
Author(s): Kim Kobar, Keon Collett, Sergey V. Prykhozhij, Jason N. Berman
Software Mentions: 1
Published: about 5 years ago

10.7150/jca.53115

ApoM is an important potential protective factor in the pathogenesis of primary liver cancer
Cited by: 9
Author(s): Yaping Bai, Wenjun Pei, Xiao Zhang, Hui-hao Zheng, Hua Chen, Min Jiao, HU Li-sheng, Shuangqiu Du, Zuyue Gong, Jialin Gao, Yao Zhang
Software Mentions: 1
Published: over 5 years ago

10.3389/fcvm.2021.650278

Metabolism and Chronic Inflammation: The Links Between Chronic Heart Failure and Comorbidities
Cited by: 23
Author(s): Zhiwei Li, Hongmei Zhao, Jing Wang
Software Mentions: 1
Published: about 5 years ago

10.7150/jca.57082

CMTM3 Overexpression Predicts Poor Survival and Promotes Proliferation and Migration in Pancreatic Cancer
Cited by: 11
Author(s): Zixuan Zhou, Zuyi Ma, Zhenchong Li, Hongkai Zhuang, Chunsheng Liu, Yuanfeng Gong, Shanzhou Huang, Chuanzhao Zhang, Baohua Hou
Software Mentions: 1
Published: over 5 years ago

10.3389/fcvm.2021.697737

Aortography Keypoint Tracking for Transcatheter Aortic Valve Implantation Based on Multi-Task Learning
Cited by: 3
Author(s): Viacheslav V. Danilov, K. Yu. Klyshnikov, Olga Gerget, Igor P. Skirnevsky, Anton G. Kutikhin, А. А. Шилов, Vladimir Ganyukov, Е. А. Овчаренко
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12968-019-0531-x

Kidney transplantation is associated with reduced myocardial fibrosis. A cardiovascular magnetic resonance study with native T1 mapping
Cited by: 13
Author(s): Mariana Moraes Contti, M. P. Barbosa, Alejandra Del Carmen Villanueva Maurício, Hong Si Nga, Mariana Farina Valiatti, Henrique Mochida Takase, Ariane Moysés Bravin, Luís Gustavo Modelli de Andrade
Software Mentions: 1
Published: about 7 years ago

Projects: cran: ggplot2

Enhanced Analysis

Science Score: 100/100

Bonuses:

Papers Mentioning ggplot2 11,441