cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3389/fmolb.2020.626595

Prevention and Control of Pathogens Based on Big-Data Mining and Visualization Analysis
Cited by: 0
Author(s): Cuixia Chen, Lina Sun, Xuexin Hou, Pengcheng Du, Xiaolong Wang, Xiaochen Du, Yu-Fei Yu, Ruikun Cai, Lei Yu, Tianjun Li, Minna Luo, Yue Shen, Chao Lu, Qian Li, Chuan Zhang, Huafang Gao, Xu Ma, Hao Lin, Zhen Cao
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12891-016-1324-0

Hyaline cartilage calcification of the first metatarsophalangeal joint is associated with osteoarthritis but independent of age and BMI
Cited by: 6
Author(s): Jan Hubert, Thelonius Hawellek, Sandra Hischke, Jessica Bertrand, Matthias Krause, Klaus Püschel, W. Rüther, Andreas Niemeier
Software Mentions: 2
Published: about 8 years ago

10.1186/s40168-019-0718-2

Contribution of gut microbiota to metabolism of dietary glycine betaine in mice and in vitro colonic fermentation
Cited by: 60
Author(s): Ville Koistinen, Olli Kärkkäinen, Klaudyna Borewicz, Iman Zarei, Jenna Jokkala, Valérie Micard, Natalia Rosa‐Sibakov, Seppo Auriola, Anna Marja Aura, Hauke Smidt, Kati Hanhineva
Software Mentions: 2
Published: over 5 years ago

10.3390/genes12071055

Signatures of Transcription Factor Evolution and the Secondary Gain of Red Algae Complexity
Cited by: 7
Author(s): Romy Petroll, Mona Schreiber, Hermann Finke, J. Mark Cock, Sven B. Gould, Stefan A. Rensing
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2018.00224

Transglycosylated Starch Modulates the Gut Microbiome and Expression of Genes Related to Lipid Synthesis in Liver and Adipose Tissue of Pigs
Cited by: 28
Author(s): Monica A. Newman, Renée M. Petri, Dietmar Grüll, Qendrim Zebeli, Barbara U. Metzler‐Zebeli
Software Mentions: 2
Published: almost 7 years ago

10.1186/s13054-016-1450-y

Utility of neuron-specific enolase in traumatic brain injury; relations to S100B levels, outcome, and extracranial injury severity
Cited by: 102
Author(s): Eric Peter Thelin, Emma Jeppsson, Arvid Frostell, Mikael Svensson, Stefania Mondello, Bo‐Michael Bellander, David W. Nelson
Software Mentions: 2
Published: about 8 years ago

10.3389/fmicb.2020.554051

Fungal Composition and Diversity of the Tobacco Leaf Phyllosphere During Curing of Leaves
Cited by: 28
Author(s): Qianli Chen, Lin Cai, Han-Cheng Wang, Lun Cai, Paul H. Goodwin, Ma Jun, Feng Wang, Li Zhong
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2020.608086

Size Matters: Biological and Food Safety Relevance of Leaf Damage for Colonization of Escherichia coli O157:H7 gfp+
Cited by: 1
Author(s): Emina Mulaosmanovic, Sofia Windstam, Ivar Vågsholm, Beatrix Alsanius
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-018-36575-x

Analysis of genetic diversity of Xanthomonas oryzae pv. oryzae populations in Taiwan
Cited by: 10
Author(s): Chih‐Cheng Chien, Mei-Yi Chou, Chun-Yi Chen, Ming-Che Shih
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-018-36518-6

Forming social impressions from voices in native and foreign languages
Cited by: 23
Author(s): Cristina Baus, Phil McAleer, Katherine Marcoux, Pascal Belin, Albert Costa
Software Mentions: 2
Published: almost 6 years ago

10.1186/s40168-018-0488-2

Insights into the ecology, evolution, and metabolism of the widespread Woesearchaeotal lineages
Cited by: 159
Author(s): Xiaobo Liu, Meng Li, Cindy J. Castelle, Alexander J. Probst, Zhichao Zhou, Jie Pan, Yang Liu, Jillian F. Banfield, Ji‐Dong Gu
Software Mentions: 2
Published: over 6 years ago

10.3390/genes10110860

Transcriptional Structure of Petunia Clock in Leaves and Petals
Cited by: 6
Author(s): Marta I. Terry, Marta Carrera-Alesina, Julia Weiß, Marcos Egea‐Cortines
Software Mentions: 2
Published: about 5 years ago

10.1186/s40168-021-01075-0

Holobiont nitrogen control and its potential for eutrophication resistance in an obligate photosymbiotic jellyfish
Cited by: 11
Author(s): Till Röthig, Giulia Puntin, Jane C. Y. Wong, Alfred Burian, Wendy McLeod, David M. Baker
Software Mentions: 2
Published: over 3 years ago

10.1186/s13054-020-2754-5

Cathelicidin preserves intestinal barrier function in polymicrobial sepsis
Cited by: 22
Author(s): Jeffery Ho, Hung Chan, Yonghao Liang, Xiao Dong Liu, Lin Zhang, Qing Li, Yuchen Zhang, Judeng Zeng, Felix N. Ugwu, Idy H. T. Ho, Wei Hu, Johnny Chung Wai Yau, Sunny H. Wong, Wai Tat Wong, Lowell Ling, Chi H. Cho, Richard L. Gallo, Tony Gin, Gary Tse, Jun Yu, Matthew T.V. Chan, Constant Leung, William Wu
Software Mentions: 2
Published: almost 5 years ago

10.1530/ERC-17-0442

The microbiome in PTEN hamartoma tumor syndrome
Cited by: 5
Author(s): Victoria Byrd, Ted M. Getz, Roshan Padmanabhan, Hans Arora, Charis Eng
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-018-37294-z

STAT3 is activated in multicellular spheroids of colon carcinoma cells and mediates expression of IRF9 and interferon stimulated genes
Cited by: 7
Author(s): Elin Edsbäcker, Jason T. Serviss, Iryna Kolosenko, Caroline Palm-Apergi, Angelo De Milito, Katja Pokrovskaja Tamm
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2015.00223

Transplant experiments uncover Baltic Sea basin-specific responses in bacterioplankton community composition and metabolic activities
Cited by: 56
Author(s): Markus V. Lindh, Daniela Figueroa, Johanna Sjöstedt, Federico Baltar, Daniel Lundin, Agneta Andersson, Catherine Legrand, Jarone Pinhassi
Software Mentions: 2
Published: over 9 years ago

10.1093/conphys/coy059

Thyroid hormone levels and temperature during development alter thermal tolerance and energetics ofXenopus laevislarvae
Cited by: 13
Author(s): Katharina Ruthsatz, Kathrin H. Dausmann, Myron A. Peck, Claudia Drees, Nikita M. Sabatino, Laura I. Becker, Janica Reese, Lisa Hartmann, Julian Glos
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0202211

How often do general practitioners use placebos and non-specific interventions? Systematic review and meta-analysis of surveys
Cited by: 39
Author(s): Klaus Linde, Oxana Atmann, Karin Meißner, Antonius Schneider, Richard Meister, Levente Kriston, Christoph Werner
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.02421

Characteristics of Microbial Communities and Their Correlation With Environmental Substrates and Sediment Type in the Gas-Bearing Formation of Hangzhou Bay, China
Cited by: 3
Author(s): Tao Yu, Meng Zhang, Da Kang, Shuang Zhao, Aqiang Ding, Qiujian Lin, Dongdong Xu, Yi Hong, Lizhong Wang, Ping Zheng
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2021.667944

Metagenomic Insights Into the Microbial Iron Cycle of Subseafloor Habitats
Cited by: 3
Author(s): Arkadiy I. Garber, Ashley B. Cohen, Kenneth H. Nealson, Gustavo A. Ramírez, Roman A. Barco, Tristan C. Enzingmüller‐Bleyl, Michelle M. Gehringer, Nancy Merino
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2013.00342

Functional gene pyrosequencing and network analysis: an approach to examine the response of denitrifying bacteria to increased nitrogen supply in salt marsh sediments
Cited by: 44
Author(s): Jennifer L. Bowen, Jarrett E. K. Byrnes, David Weisman, Cory Colaneri
Software Mentions: 2
Published: almost 12 years ago

10.1038/s41598-018-37547-x

Effects of defined gut microbial ecosystem components on virulence determinants of Clostridioides difficile
Cited by: 19
Author(s): Christian Carlucci, Carys S Jones, Kaitlyn Oliphant, Sandi Yen, Michelle Daigneault, Charley Carriero, Avery Robinson, Elaine O. Petrof, J. Scott Weese, Emma Allen‐Vercoe
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2021.738734

Penicillium simplicissimum NL-Z1 Induced an Imposed Effect to Promote the Leguminous Plant Growth
Cited by: 3
Author(s): Jiayao Zhuang, Chao Liu, Xiaoxue Wang, Tongxin Xu, Hao Yang
Software Mentions: 2
Published: about 3 years ago

10.3389/fmicb.2018.01260

Molecular Diagnosis of Brettanomyces bruxellensis’ Sulfur Dioxide Sensitivity Through Genotype Specific Method
Cited by: 38
Author(s): Marta Avramova, Amélie Vallet-Courbin, Julie Maupeu, Isabelle Masneuf‐Pomarède, Warren Albertin
Software Mentions: 2
Published: over 6 years ago

10.1186/s12879-015-1063-0

Analysis of cerebrospinal fluid protein concentrations of patients with cryptococcal meningitis treated with antifungal agents
Cited by: 6
Author(s): Lien‐Hung Huang, Hui Yang, Junyan Qu, Yanbin Liu, Chengliang Zhong, Guangmin Tang, Ying Liu, Yao Huang, Xiaoju Lv
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-018-36582-y

Spatial heterogeneity of heavy metal contamination in soils and plants in Hefei, China
Cited by: 31
Author(s): Qianjin Zhang, Ruoyun Yu, Songling Fu, Wu ZeMin, Han Y. H. Chen, Hua Liu
Software Mentions: 2
Published: almost 6 years ago

10.3389/fpls.2021.621954

Effect of Grafting on Viral Resistance of Non-transgenic Plum Scion Combined With Transgenic PPV-Resistant Rootstock
Cited by: 9
Author(s): Tatiana N. Sidorova, Dmitry Miroshnichenko, Ilya Kirov, Alexander Pushin, Sergey Dolgov
Software Mentions: 2
Published: almost 4 years ago

10.1093/g3journal/jkab267

A candidate chromosome inversion in Arctic charr (Salvelinus alpinus) identified by population genetic analysis techniques
Cited by: 4
Author(s): Matthew C. Hale, Matthew A. Campbell, Garrett J. McKinney
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2018.00079

Environmental Metagenomic Assemblies Reveal Seven New Highly Divergent Chlamydial Lineages and Hallmarks of a Conserved Intracellular Lifestyle
Cited by: 32
Author(s): Trestan Pillonel, Claire Bertelli, Gilbert Greub
Software Mentions: 2
Published: almost 7 years ago

10.1534/g3.120.401372

Genome-Wide Characterization and Comparative Analysis of MYB Transcription Factors in Ganoderma Species
Cited by: 8
Author(s): Lining Wang, Qinghua Huang, Liulian Zhang, Qingfu Wang, Lei Liang, Baosheng Liao
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0234771

A herbicide resistance risk assessment for weeds in wheat and barley crops in New Zealand
Cited by: 20
Author(s): Zachary Ngow, R. J. Chynoweth, Matilda Gunnarsson, M. P. Rolston, Christopher E. Buddenhagen
Software Mentions: 2
Published: over 4 years ago

10.1093/conphys/coaa100

Shifts in sensitivity of amphibian metamorphosis to endocrine disruption: the common frog (Rana temporaria) as a case study
Cited by: 13
Author(s): Katharina Ruthsatz, Kathrin H. Dausmann, Katharina Paesler, Patricia Babos, Nikita M. Sabatino, Myron A. Peck, Julian Glos
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2019.00273

Lactobacillus gasseri APC 678 Reduces Shedding of the Pathogen Clostridium difficile in a Murine Model
Cited by: 9
Author(s): Lisa Quigley, M. Coakley, Debebe Alemayehu, Mary C. Rea, Patrick G. Casey, Órla O’Sullivan, Eileen F. Murphy, Barry Kiely, Paul D. Cotter, Colin Hill, R. Paul Ross
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2018.02613

Different Selectivity in Fungal Communities Between Manure and Mineral Fertilizers: A Study in an Alkaline Soil After 30 Years Fertilization
Cited by: 20
Author(s): Ying Wang, Hongfei Ji, Yaxian Hu, Rui Wang, Junpeng Rui, Shengli Guo
Software Mentions: 2
Published: about 6 years ago

10.1111/jcmm.14071

Lnc <scp>RNA KCNQ</scp> 1 <scp>OT</scp> 1 enhanced the methotrexate resistance of colorectal cancer cells by regulating miR‐760/ <scp>PPP</scp> 1R1B via the <scp>cAMP</scp> signalling pathway
Cited by: 55
Author(s): Di Xian, Yu Zhao
Software Mentions: 2
Published: over 5 years ago

10.1093/conphys/cow053

Interactions between rates of temperature change and acclimation affect latitudinal patterns of warming tolerance
Cited by: 46
Author(s): Jessica L. Allen, Steven Loudon Chown, Charlene Janion‐Scheepers, Susana Clusella‐Trullas
Software Mentions: 2
Published: almost 9 years ago

10.1093/conphys/coaa049

Basal tolerance but not plasticity gives invasive springtails the advantage in an assemblage setting
Cited by: 16
Author(s): Laura M. Phillips, Ian J. Aitkenhead, Charlene Janion‐Scheepers, Catherine K. King, Melodie A. McGeoch, Uffe N. Nielsen, Aleks Terauds, W P Amy Liu, Steven L. Chown
Software Mentions: 2
Published: almost 5 years ago

10.1111/conl.12381

Native Seed Supply and the Restoration Species Pool
Cited by: 66
Author(s): Emma Ladouceur, Borja Jímenez‐Alfaro, María Susana Marín, Marcello De Vitis, Holly Abbandonato, Pietro P. M. Iannetta, Costantino Bonomi, Hugh W. Pritchard
Software Mentions: 2
Published: over 7 years ago

10.7554/eLife.54309

Caenorhabditis elegans nuclear RNAi factor SET-32 deposits the transgenerational histone modification, H3K23me3
Cited by: 28
Author(s): Lianna Schwartz-Orbach, Chenzhen Zhang, Simone Sidoli, Richa Amin, Diljeet Kaur, Anna Zhebrun, Julie Zhouli Ni, Sam Guoping Gu
Software Mentions: 2
Published: over 4 years ago

10.1111/cobi.12548

A meta‐analysis of functional group responses to forest recovery outside of the tropics
Cited by: 53
Author(s): Rebecca Spake, Thomas H. G. Ezard, Philip A. Martin, Adrian C. Newton, C. Patrick Doncaster
Software Mentions: 2
Published: over 9 years ago

10.1111/jcmm.15541

The ACE2 expression in Sertoli cells and germ cells may cause male reproductive disorder after SARS‐CoV‐2 infection
Cited by: 137
Author(s): Qiaoyan Shen, Xia Xiao, Aili Aierken, Wei Y, Xiaojie Wu, Mingzhi Liao, Jinlian Hua
Software Mentions: 2
Published: over 4 years ago

10.1186/s12935-018-0673-1

MicroRNA-218-5p inhibits cell growth and metastasis in cervical cancer via LYN/NF-κB signaling pathway
Cited by: 28
Author(s): Yunsheng Xu, Qiaojun He, Yiyi Lu, Fengxing Tao, Liang Zhao, Rongying Ou
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2020.00032

Metagenomic Characterization of Intestinal Regions in Pigs With Contrasting Feed Efficiency
Cited by: 43
Author(s): Jianping Quan, Zhenfang Wu, Yong Ye, Longlong Peng, Jie Wu, Donglin Ruan, Yibin Qiu, Rongrong Ding, Xingwang Wang, Enqin Zheng, Guangyan Cai, Wen Huang, Jie Yang
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2018.01582

3-NOP vs. Halogenated Compound: Methane Production, Ruminal Fermentation and Microbial Community Response in Forage Fed Cattle
Cited by: 55
Author(s): Gonzalo Martínez Fernández, S. Duval, Maik Kindermann, Horst Joachim Schirra, Stuart E. Denman, Christopher S. McSweeney
Software Mentions: 2
Published: over 6 years ago

10.3389/fpls.2020.587528

Phenotypic Selection on Flower Color and Floral Display Size by Three Bee Species
Cited by: 12
Author(s): Johanne Brunet, Andrew J Flick, Austin A. Bauer
Software Mentions: 2
Published: almost 4 years ago

10.3389/fmicb.2021.707786

Effects of Heavy Metals/Metalloids and Soil Properties on Microbial Communities in Farmland in the Vicinity of a Metals Smelter
Cited by: 37
Author(s): Xiao-Min Hu, Jianlei Wang, Ying Liu, Xingyu Liu, Juan Zhong, Xinglan Cui, Mingjiang Zhang, Ding Ma, Yan Xiao, Xuezhe Zhu
Software Mentions: 2
Published: over 3 years ago

10.1186/s12866-017-1055-x

16S rRNA gene-based association study identified microbial taxa associated with pork intramuscular fat content in feces and cecum lumen
Cited by: 45
Author(s): Shouguo Fang, Xingwei Xiong, Ying Su, Lusheng Huang, Congying Chen
Software Mentions: 2
Published: over 7 years ago

10.3390/genes12081182

Set1 Targets Genes with Essential Identity and Tumor-Suppressing Functions in Planarian Stem Cells
Cited by: 2
Author(s): Prince Verma, Courtney K. M. Waterbury, Elizabeth M. Duncan
Software Mentions: 2
Published: over 3 years ago

10.1186/s12935-021-01878-z

Knockdown of GTF2E2 inhibits the growth and progression of lung adenocarcinoma via RPS4X in vitro and in vivo
Cited by: 10
Author(s): Guoshu Bi, Donglin Zhu, Yunyi Bian, Yiwei Huang, Cheng Zhan, Yong Yang, Qun Wang
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-019-39284-1

Vegetation-fire feedback reduces projected area burned under climate change
Cited by: 71
Author(s): Matthew D. Hurteau, Shuang Liang, A. L. Westerling, Christine Wiedinmyer
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0235222

Advantages of an easy-to-use DNA extraction method for minimal-destructive analysis of collection specimens
Cited by: 12
Author(s): Franziska Patzold, Alberto Zilli, Anna K. Hundsdoerfer
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2019.01018

Actinobacteria and Cyanobacteria Diversity in Terrestrial Antarctic Microenvironments Evaluated by Culture-Dependent and Independent Methods
Cited by: 43
Author(s): Adriana Rego, Francisco Raio, Teresa P. Martins, Hugo Leonardo Coelho Ribeiro, António G G Sousa, Joana Séneca, Mafalda S. Baptista, Charles K. Lee, S. Craig Cary, Vítor Ramos, Maria de Fátima Carvalho, Pedro N. Leão, Catarina Magalhães
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2019.02952

Trophic Selective Pressures Organize the Composition of Endolithic Microbial Communities From Global Deserts
Cited by: 24
Author(s): Evan B Qu, Christopher R. Omelon, Aharon Oren, Victoria Meslier, Don A. Cowan, Gillian Maggs‐Kölling, Jocelyne DiRuggiero
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2017.00949

Nutrient Stoichiometry Shapes Microbial Community Structure in an Evaporitic Shallow Pond
Cited by: 53
Author(s): Zarraz M.-P. Lee, Amisha T. Poret-Peterson, Janet L. Siefert, Drishti Kaul, Ahmed Moustafa, Andrew E. Allen, Chris L. Dupont, Luis E. Eguiarte, Valeria Souza, James J. Elser
Software Mentions: 2
Published: over 7 years ago

10.3389/fpls.2020.562001

Functional Allium fistulosum Centromeres Comprise Arrays of a Long Satellite Repeat, Insertions of Retrotransposons and Chloroplast DNA
Cited by: 5
Author(s): Ilya Kirov, Sergey Odintsov, Murad Omarov, Sofya Gvaramiya, Pavel Merkulov, Maxim Dudnikov, Aleksey Ermolaev, Katrijn Van Laere, A. A. Soloviev, Ludmila Khrustaleva
Software Mentions: 2
Published: about 4 years ago

10.3389/fmicb.2021.725612

The Binary Toxin of Clostridioides difficile Alters the Proteome and Phosphoproteome of HEp-2 Cells
Cited by: 8
Author(s): Florian Stieglitz, Ralf Gerhard, Andreas Pich
Software Mentions: 2
Published: about 3 years ago

10.1038/s41598-019-39239-6

Integrated single-base resolution maps of transcriptome, sRNAome and methylome of Tomato yellow leaf curl virus (TYLCV) in tomato
Cited by: 22
Author(s): Álvaro Piedra-Aguilera, Chen Jiao, Ana P. Luna, Francisco Villanueva, Marc Dabad, Anna Esteve‐Codina, Juan Antonio Díaz-Pendón, Zhangjun Fei, Eduardo R. Bejarano, Araceli G. Castillo
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2016.01812

Rapid Fermentable Substance Modulates Interactions between Ruminal Commensals and Toll-Like Receptors in Promotion of Immune Tolerance of Goat Rumen
Cited by: 21
Author(s): Hong Shen, Zhongyan Lu, Zhan Chen, Yufeng Wu, Zongzhuan Shen
Software Mentions: 2
Published: about 8 years ago

10.3389/fmicb.2020.01890

Comparative Microbiomics of Tephritid Frugivorous Pests (Diptera: Tephritidae) From the Field: A Tale of High Variability Across and Within Species
Cited by: 20
Author(s): Maarten De Cock, M. Virgilio, Peter Vandamme, Kostas Bourtzis, M. De Meyer, Anne Willems
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2020.577268

Infection of Ophiocordyceps sinensis Fungus Causes Dramatic Changes in the Microbiota of Its Thitarodes Host
Cited by: 14
Author(s): Hua Wu, Zhongchen Rao, Li Cao, Patrick De Clercq, Richou Han
Software Mentions: 2
Published: about 4 years ago

10.3389/fpls.2021.665745

Genome-Wide Association Mapping of Mixed Linkage (1,3;1,4)-β-Glucan and Starch Contents in Rice Whole Grain
Cited by: 5
Author(s): Rahele Panahabadi, Asadollah Ahmadikhah, Lauren S. McKee, Pär K. Ingvarsson, Naser Farrokhi
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2020.01889

Cross-Species Transmission and Evolution of SIV Chimpanzee Progenitor Viruses Toward HIV-1 in Humanized Mice
Cited by: 7
Author(s): Kimberly Schmitt, James Curlin, Leila Remling‐Mulder, Ryan V. Moriarty, Kelly Goff, Shelby L. O’Connor, Mark D. Stenglein, Preston A. Marx, Ramesh Akkina
Software Mentions: 2
Published: over 4 years ago

10.7554/eLife.55744

Host-induced spermidine production in motile Pseudomonas aeruginosa triggers phagocytic uptake
Cited by: 5
Author(s): Sebastian Felgner, Matthias Preuße, Ulrike Beutling, Stephanie Stahnke, Vinay Pawar, Manfred Rohde, Mark Brönstrup, Theresia E. B. Stradal, Susanne Häußler
Software Mentions: 2
Published: about 4 years ago

10.3389/fpls.2021.687434

Evaluating the Aqueous Phase From Hydrothermal Carbonization of Cow Manure Digestate as Possible Fertilizer Solution for Plant Growth
Cited by: 15
Author(s): Silvia Celletti, Maximilian Lanz, Alex Bergamo, Vittoria Benedetti, Daniele Basso, Marco Baratieri, Stefano Cesco, Tanja Mimmo
Software Mentions: 2
Published: over 3 years ago

10.1172/jci.insight.139032

Pathogenic, glycolytic PD-1+ B cells accumulate in the hypoxic RA joint
Cited by: 36
Author(s): Achilleas Floudas, Nuno Neto, Viviana Marzaioli, Kieran Murray, Barry Moran, Michael G. Monaghan, Candice Low, Ronan Mullan, Navin Rao, Vinod Krishna, Sunil Nagpal, Douglas J. Veale, Ursula Fearon
Software Mentions: 2
Published: about 4 years ago

10.1523/ENEURO.0092-18.2018

Key Brain Network Nodes Show Differential Cognitive Relevance and Developmental Trajectories during Childhood and Adolescence
Cited by: 26
Author(s): Knut-Kristian Kolskår, Dag Alnæs, Tobias Kaufmann, Geneviève Richard, Anne-Marthe Sanders, Kristine M. Ulrichsen, Torgeir Moberget, Ole A. Andreassen, Jan Egil Nordvik, Lars T. Westlye
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2021.640408

Genotypic Characterization of Clinical Klebsiella spp. Isolates Collected From Patients With Suspected Community-Onset Sepsis, Sweden
Cited by: 12
Author(s): Patricia Saxenborn, John D. Baxter, Andreas Tilevik, Magnus Fagerlind, Fredrik Dyrkell, Anna-Karin Pernestig, Helena Enroth, Diana Tilevik
Software Mentions: 2
Published: over 3 years ago

10.3390/genes10110891

Intermediate-Salinity Systems at High Altitudes in the Peruvian Andes Unveil a High Diversity and Abundance of Bacteria and Viruses
Cited by: 10
Author(s): Hugo G Castelán-Sánchez, Paola Elorrieta, Pedro Romoacca, Arturo Liñan-Torres, José Luis Sierra, Ingrid Vera, Ramón Alberto Batista-García, Silvia Tenorio-Salgado, Gabriel Lizama-Uc, Ernesto Pérez‐Rueda, María Antonieta Quispe-Ricalde, Sonia Dávila-Ramos
Software Mentions: 2
Published: about 5 years ago

10.1007/s10120-018-0859-1

E-cadherin-deficient cells have synthetic lethal vulnerabilities in plasma membrane organisation, dynamics and function
Cited by: 25
Author(s): Tanis Godwin, S. Thomas Kelly, Tom P. Brew, Nicola Bougen-Zhukov, Andrew Single, Augustine Chen, Cassie E. Stylianou, Lawrence D. Harris, Sophie K. Currie, Bryony J. Telford, Henry Beetham, Gary B. Evans, Michael A. Black, Parry Guilford
Software Mentions: 2
Published: over 6 years ago

10.7554/eLife.03613

TAF4, a subunit of transcription factor II D, directs promoter occupancy of nuclear receptor HNF4A during post-natal hepatocyte differentiation
Cited by: 29
Author(s): Daniel Alpern, Diana Langer, Benoît Ballester, Stéphanie Le Gras, Christophe Romier, Gabrielle Mengus, Irwin Davidson
Software Mentions: 2
Published: about 10 years ago

10.3389/fmicb.2021.660237

A Virus Infecting Hibiscus rosa-sinensis Represents an Evolutionary Link Between Cileviruses and Higreviruses
Cited by: 14
Author(s): Alejandro Olmedo-Velarde, John Hu, Michael Melzer
Software Mentions: 2
Published: over 3 years ago

10.1038/s41416-018-0108-8

Mendelian randomisation study of age at menarche and age at menopause and the risk of colorectal cancer
Cited by: 15
Author(s): Sonja Neumeyer, Barbara L. Banbury, Volker Arndt, Sonja I. Berndt, Stéphane Bézieau, Stephanie A. Bien, Daniel D. Buchanan, Katja Butterbach, Bette J. Caan, Peter T. Campbell, Graham Casey, Andrew T. Chan, Stephen J. Chanock, Jiyan Dai, Steven Gallinger, Edward Giovannucci, Graham G. Giles, William M. Grady, Jochen Hampe, Michael Hoffmeister, John L. Hopper, Li Hsu, Mark A. Jenkins, Amit D. Joshi, Susanna C. Larsson, Loı̈c Le Marchand, Annika Lindblom, Vı́ctor Moreno, Mathieu Lemire, Li Li, Yi Lin, Kenneth Offit, Polly A. Newcomb, Paul D.P. Pharaoh, John D. Potter, Lihong Qi, Gad Rennert, Clemens Schafmayer, Robert E. Schoen, Martha L. Slattery, Mingyang Song, Cornelia M. Ulrich, Aung Ko Win, Emily White, Alicja Wolk, Michael O. Woods, Anna H. Wu, Stephen B. Gruber, Hermann Brenner, Ulrike Peters, Jenny Chang‐Claude
Software Mentions: 2
Published: over 6 years ago

10.1186/s13072-018-0229-6

The methylome of the marbled crayfish links gene body methylation to stable expression of poorly accessible genes
Cited by: 54
Author(s): Fanny Gatzmann, Cassandra Falckenhayn, Julian Gutekunst, Katharina Hanna, Günter Raddatz, Vitor Coutinho Carneiro, Frank Lyko
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2018.01905

Adhesion of Salmonella to Pancreatic Secretory Granule Membrane Major Glycoprotein GP2 of Human and Porcine Origin Depends on FimH Sequence Variation
Cited by: 17
Author(s): Rafał Kolenda, Michał Burdukiewicz, Juliane Schiebel, Stefan Rödiger, Lysann Sauer, István Szabó, Aleksandra Orłowska, Jörg Weinreich, Jörg Nitschke, Alexander Böhm, Ulrike Gerber, Dirk Roggenbuck, Peter Schierack
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.01930

Cas9 Contributes to Group B Streptococcal Colonization and Disease
Cited by: 35
Author(s): Brady L. Spencer, Liwen Deng, Kathryn A. Patras, Zachary M. Burcham, Glenda F. Sanches, Prescilla Emy Nagao, Kelly S. Doran
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-40766-5

Effects of species traits and environmental predictors on performance and transferability of ecological niche models
Cited by: 59
Author(s): Adrián Regos, Laura Gagne, Domingo Alcaraz‐Segura, João P. Honrado, Jesús Domínguez
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0061301

Sex-Specific Effect of Juvenile Diet on Adult Disease Resistance in a Field Cricket
Cited by: 27
Author(s): Clint D. Kelly, Brittany R. Tawes
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-019-38654-z

Imaging object-scene relations processing in visible and invisible natural scenes
Cited by: 22
Author(s): Nathan Faivre, Julien Dubois, Naama Schwartz, Liad Mudrik
Software Mentions: 2
Published: over 5 years ago

10.3389/fpls.2020.00472

Flavor-Related Quality Attributes of Ripe Tomatoes Are Not Significantly Affected Under Two Common Household Conditions
Cited by: 14
Author(s): Larissa Kanski, Marcel Naumann, Elke Pawelzik
Software Mentions: 2
Published: over 4 years ago

10.3389/fpls.2019.00234

The Rpv3-3 Haplotype and Stilbenoid Induction Mediate Downy Mildew Resistance in a Grapevine Interspecific Population
Cited by: 42
Author(s): S. Vezzulli, G. Malacarne, Domenico Masuero, A. Vecchione, C. Dolzani, Vadim V. Goremykin, Zeraye Mehari Haile, Elisa Banchi, Riccardo Velasco, M. Stefanini, Urška Vrhovšek, L. Zulini, Pietro Franceschi, C. Moser
Software Mentions: 2
Published: over 5 years ago

10.1111/ejn.15199

White matter microstructure of the neural emotion regulation circuitry in mild traumatic brain injury
Cited by: 3
Author(s): Harm Jan van der Horn, Namrata R. Mangina, Sandra E. Rakers, J G M Kok, Marieke E. Timmerman, Alexander Leemans, Jacoba M. Spikman, Joukje van der Naalt
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2017.00264

A Few Pseudomonas Oligotypes Dominate in the Meat and Dairy Processing Environment
Cited by: 63
Author(s): Giuseppina Stellato, Daniel R. Utter, Andy Voorhis, Maria De Angelis, A. Murat Eren, Danilo Ercolini
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12935-021-02180-8

LINC01605, regulated by the EP300-SMYD2 complex, potentiates the binding between METTL3 and SPTBN2 in colorectal cancer
Cited by: 9
Author(s): Meng Yue, Tao Liu, Guoqiang Yan, Xiaofan Luo, Lei Wang
Software Mentions: 2
Published: about 3 years ago

10.3389/fmicb.2020.581387

Preserving Microbial Community Integrity in Oilfield Produced Water
Cited by: 4
Author(s): Natalie M. Rachel, Lisa M. Gieg
Software Mentions: 2
Published: about 4 years ago

10.1186/s12916-021-02116-z

Activated gut-homing CD8+ T cells for coeliac disease diagnosis on a gluten-free diet
Cited by: 3
Author(s): Fernando Fernández‐Bañares, Natalia López-Palacios, María Corzo, Beatriz Arau, Mercedes Rubio, Marta Fernández-Prieto, Eva Tristán, Mar Pujals, Sergio Farrais, Saúl Horta, J. Hernández, Marta Gómez-Perosanz, Pedro A. Reche, María Esteve, Concepción Núñez
Software Mentions: 2
Published: about 3 years ago

10.3389/fmicb.2020.548607

Total Arsenic, pH, and Sulfate Are the Main Environmental Factors Affecting the Microbial Ecology of the Water and Sediments in Hulun Lake, China
Cited by: 13
Author(s): Yongquan Shang, Xiaoyang Wu, Qinguo Wei, Huashan Dou, Xibao Wang, Jun Chen, Huanxin Zhang, Shengchao Ma, Honghai Zhang
Software Mentions: 2
Published: about 4 years ago

10.1038/s42003-021-02319-3

Joint control of visually guided actions involves concordant increases in behavioural and neural coupling
Cited by: 7
Author(s): David R. Painter, Jeffrey Kim, Angela I. Renton, Jason B. Mattingley
Software Mentions: 2
Published: over 3 years ago

10.3389/fpls.2021.656657

Identification of Small RNAs During High Light Acclimation in Arabidopsis thaliana
Cited by: 10
Author(s): Bhavika Tiwari, Kristin Habermann, Muhammad Arif, Oguz Top, Wolfgang Frank
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-019-41160-x

Endophytic Bacterial Communities Associated with Roots and Leaves of Plants Growing in Chilean Extreme Environments
Cited by: 57
Author(s): Qian Zhang, Jacquelinne J. Acuña, Nitza G. Inostroza, Marı́a de la Luz Mora, Sergio Radic, Michael J. Sadowsky, Milko A. Jorquera
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-41551-0

A genome-wide association study on photic sneeze reflex in the Chinese population
Cited by: 4
Author(s): Mengqiao Wang, Xinghan Sun, Yang Shi, Xiaojun Song, Hao Mi
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0242021

Perturbation of the human gastrointestinal tract microbial ecosystem by oral drugs to treat chronic disease results in a spectrum of individual specific patterns of extinction and persistence of dominant microbial strains
Cited by: 7
Author(s): Hyunmin Koo, Casey D. Morrow
Software Mentions: 2
Published: about 4 years ago

10.1172/jci.insight.146707

Hedgehog-induced PD-L1 on tumor-associated macrophages is critical for suppression of tumor-infiltrating CD8+ T cell function
Cited by: 42
Author(s): Amy J. Petty, Rui Dai, Rosa Lapalombella, Robert A. Baiocchi, Don M. Benson, Zihai Li, Xin Huang, Yiping Yang
Software Mentions: 2
Published: over 3 years ago

10.3389/fgene.2019.00417

Multi-Phenotype Association Decomposition: Unraveling Complex Gene-Phenotype Relationships
Cited by: 17
Author(s): Deborah Weighill, Piet Jones, Carissa Bleker, Priya Ranjan, Manesh Shah, Nan Zhao, Madhavi Z. Martin, Stephen P. DiFazio, David Macaya‐Sanz, Jeremy Schmutz, Avinash Sreedasyam, Timothy J. Tschaplinski, Gerald A. Tuskan, Daniel Jacobson
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-41582-7

Highly Mutable Linker Regions Regulate HIV-1 Rev Function and Stability
Cited by: 12
Author(s): Bhargavi Jayaraman, Jason D Fernandes, Sen Yang, Cynthia L. Smith, Alan D. Frankel
Software Mentions: 2
Published: over 5 years ago

10.1007/s00429-016-1279-9

The effect of unilateral disruption of the centrifugal visual system on normal eye development in chicks raised under constant light conditions
Cited by: 7
Author(s): Christopher M. Dillingham, Jeremy A. Guggenheim, Jonathan Thor Erichsen
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0166147

SLC7A5 Functions as a Downstream Target Modulated by CRKL in Metastasis Process of Gastric Cancer SGC-7901 Cells
Cited by: 13
Author(s): Junqing Wang, Xiaochun Fei, Wenjun Wu, Xuehua Chen, Liping Su, Zhenggang Zhu, Yunyun Zhou
Software Mentions: 2
Published: about 8 years ago

10.3389/fpls.2020.596000

Nutraceutical Profiles of Two Hydroponically Grown Sweet Basil Cultivars as Affected by the Composition of the Nutrient Solution and the Inoculation With Azospirillum brasilense
Cited by: 16
Author(s): Šimun Kolega, Begoña Miras-Moreno, Valentina Buffagni, Luigi Lucini, Fabio Valentinuzzi, Mauro Maver, Tanja Mimmo, Marco Trevisan, Youry Pii, Stefano Cesco
Software Mentions: 2
Published: about 4 years ago

10.1186/s12866-021-02270-7

WGS based analysis of acquired antimicrobial resistance in human and non-human Acinetobacter baumannii isolates from a German perspective
Cited by: 9
Author(s): Gamal Wareth, Christian Brandt, Lisa D. Sprague, Heinrich Neubauer, Mathias W. Pletz
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0233945

The transcriptome of Listeria monocytogenes during co-cultivation with cheese rind bacteria suggests adaptation by induction of ethanolamine and 1,2-propanediol catabolism pathway genes
Cited by: 14
Author(s): Justin M. Anast, Stephan Schmitz‐Esser
Software Mentions: 2
Published: over 4 years ago

Projects: cran: ggplot2

Papers Mentioning ggplot2 11,441