cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1186/s12915-021-01070-9

An engineered genetic circuit for lactose intolerance alleviation
Cited by: 2
Author(s): Mingyue Cheng, Zhangyu Cheng, Yiyan Yu, Wangjie Liu, Ruihao Li, Zhenyi Guo, Jiyue Qin, Zhi Zeng, Dong Lin, Yufeng Mo, Chunxiu Pan, Yuanhao Liang, Jinman Li, Yigang Tong, Yunjun Yan, Yi Zhan, Kang Ning
Software Mentions: 2
Published: over 3 years ago

10.1111/1749-4877.12468

High‐elevation hypoxia impacts perinatal physiology and performance in a potential montane colonizer
Cited by: 12
Author(s): Jérémie Souchet, Eric J. Gangloff, Gaëlle Micheli, Coralie Bossu, Audrey Trochet, Romain Bertrand, Jean Clobert, Olivier Calvez, Albert Martínez-Silvestre, Elodie Darnet, Hugo Le Chevalier, Olivier Guillaume, Marc Mossoll‐Torres, Laurent Barthe, Gilles Pottier, Hervé Piégay, Fabien Aubret
Software Mentions: 2
Published: over 4 years ago

10.1001/jamanetworkopen.2019.1313

Comparison of a Potential Hospital Quality Metric With Existing Metrics for Surgical Quality–Associated Readmission
Cited by: 18
Author(s): Laura A. Graham, Hillary J. Mull, Todd H. Wagner, Melanie S. Morris, Amy K. Rosen, Joshua Richman, Jeff Whittle, Edith Burns, Laurel A. Copeland, Kamal M.F. Itani, Mary T. Hawn
Software Mentions: 2
Published: over 5 years ago

10.1186/s12915-019-0686-9

Rapid identification of species, sex and maturity by mass spectrometric analysis of animal faeces
Cited by: 6
Author(s): Nicola B. Davidson, Natalie I Koch, Joscelyn Sarsby, Emrys A. Jones, Jane L. Hurst, Robert J. Beynon
Software Mentions: 2
Published: over 5 years ago

10.1001/jamanetworkopen.2019.7216

Association of US Medical Marijuana Laws With Nonmedical Prescription Opioid Use and Prescription Opioid Use Disorder
Cited by: 36
Author(s): Luís Segura, Christine Mauro, Natalie S. Levy, Nicole Khauli, Morgan M. Philbin, Pia M. Mauro, Sílvia S. Martins
Software Mentions: 2
Published: over 5 years ago

10.1001/jamanetworkopen.2019.14149

Epidemiologic Trends in Clostridioides difficile Infections in a Regional Community Hospital Network
Cited by: 22
Author(s): Nicholas Turner, Steven C. Grambow, Christopher W. Woods, Vance G. Fowler, Rebekah W. Moehring, Deverick J. Anderson, Sarah S. Lewis
Software Mentions: 2
Published: about 5 years ago

10.1001/jamanetworkopen.2020.0512

Assessment of Electronic Health Record Search Patterns and Practices by Practitioners in a Large Integrated Health Care System
Cited by: 17
Author(s): Halley Ruppel, Aashish Bhardwaj, R. Manickam, Julia Adler‐Milstein, Marc Flagg, Manuel A. Ballesca, Jean‐Louis Vincent
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12859-016-0917-9

Web-TCGA: an online platform for integrated analysis of molecular cancer data sets
Cited by: 135
Author(s): Mario C. Deng, Johannes Brägelmann, Joachim L. Schultze, Sven Perner
Software Mentions: 2
Published: almost 9 years ago

10.1002/jbm4.10372

Potential Biomarkers of the Turnover, Mineralization, and Volume Classification: Results Using <scp>NMR</scp> Metabolomics in Hemodialysis Patients
Cited by: 2
Author(s): Aline Lourenço Baptista, Kallyandra Padilha, Pamella Araujo Malagrino, Gabriela Venturini, Ana Cm Zeri, Luciene M. dos Reis, Janaina S. Martins, Vanda Jorgetti, Alexandre C. Pereira, Silvia Maria de Oliveira Titan, Rosa M.A. Moysés
Software Mentions: 2
Published: over 4 years ago

10.1172/jci.insight.121144

The TAB1-p38α complex aggravates myocardial injury and can be targeted by small molecules
Cited by: 15
Author(s): G.F. De Nicola, Rekha Bassi, C. Blake Nichols, Mariana Fernández-Caggiano, Pelin Golforoush, Dibesh Thapa, Rosaleen J. Anderson, Eva Denise Martin, Sharwari Verma, Jens Kleinjung, Adam Laing, Jonathan P. Hutchinson, Philip Eaton, James E. Clark, Michael Marber
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.ppat.1009112

Bacterial persisters in long-term infection: Emergence and fitness in a complex host environment
Cited by: 49
Author(s): Jennifer A. Bartell, David R. Cameron, Biljana Mojsoska, Janus Anders Juul Haagensen, Tacjana Pressler, Lea Mette Madsen Sommer, Kim Lewis, Søren Molin, Helle Krogh Johansen
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.ppat.1009368

The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface
Cited by: 32
Author(s): Juan Carlos De la Concepcion, Josephine HR Maidment, Apinya Longya, Gui Xiao, Marina Franceschetti, Mark J. Banfield
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.ppat.1009446

The herpesvirus accessory protein γ134.5 facilitates viral replication by disabling mitochondrial translocation of RIG-I
Cited by: 15
Author(s): Liu Xing, Yijie Ma, Kathleen Voss, Michiel van Gent, Ying Chan, Michaela U. Gack, Michael Gale, Bin He
Software Mentions: 2
Published: over 3 years ago

10.1186/s12859-016-1240-1

solveME: fast and reliable solution of nonlinear ME models
Cited by: 41
Author(s): Laurence T. Yang, Ding Ma, Ali Ebrahim, Colton J. Lloyd, Michael A. Saunders, Bernhard Ø. Palsson
Software Mentions: 2
Published: about 8 years ago

10.1186/s12859-021-04238-w

Performance of Web tools for predicting changes in protein stability caused by mutations
Cited by: 21
Author(s): Anna Marabotti, Eugenio Del Prete, Bernardina Scafuri, Angelo Facchiano
Software Mentions: 2
Published: over 3 years ago

10.1186/s12859-019-2622-y

Genome-wide tracts of homozygosity and exome analyses reveal repetitive elements with Barrets esophagus/esophageal adenocarcinoma risk
Cited by: 3
Author(s): Visanu Wanchai, Jing Jin, Emine Bircan, Charis Eng, Mohammed S. Orloff
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.ppat.1009589

Respiratory syncytial virus M2-1 protein associates non-specifically with viral messenger RNA and with specific cellular messenger RNA transcripts
Cited by: 6
Author(s): Molly R. Braun, Sarah L. Noton, Emmeline L. Blanchard, Afzaal Shareef, Philip J. Santangelo, W. Evan Johnson, Rachel Fearns
Software Mentions: 2
Published: over 3 years ago

10.1186/s12859-018-2373-1

Diverse dynamics features of novel protein kinase C (PKC) isozymes determine the selectivity of a fluorinated balanol analogue for PKCε
Cited by: 4
Author(s): Ari Hardianto, Varun Khanna, Fei Liu, Shoba Ranganathan
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.ppat.1009658

NleB2 from enteropathogenic Escherichia coli is a novel arginine-glucose transferase effector
Cited by: 8
Author(s): Cristina Giogha, Nichollas E. Scott, Tania Wong Fok Lung, Georgina L. Pollock, Marina Harper, Ethan D. Goddard‐Borger, Jaclyn S. Pearson, Elizabeth L. Hartland
Software Mentions: 2
Published: over 3 years ago

10.2196/12811

Identifying Attrition Phases in Survey Data: Applicability and Assessment Study
Cited by: 14
Author(s): Camille J. Hochheimer, Roy Sabo, Robert A. Perera, Nitai D. Mukhopadhyay, Alex H. Krist
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.ppat.1009802

Modern Acinetobacter baumannii clinical isolates replicate inside spacious vacuoles and egress from macrophages
Cited by: 17
Author(s): Gabriela Sycz, Gisela Di Venanzio, Jesús S. Distel, Mariana G. Sartorio, Nguyen-Hung Le, Nichollas E. Scott, Wandy L. Beatty, Mario F. Feldman
Software Mentions: 2
Published: over 3 years ago

10.1186/s12859-014-0372-4

A fixed-point algorithm for estimating amplification efficiency from a polymerase chain reaction dilution series
Cited by: 9
Author(s): Michael E. Jones, George C. Mayne, Tingting Wang, David I. Watson, Damian J. Hussey
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.ppat.1009886

A 3,000-year-old, basal S. enterica lineage from Bronze Age Xinjiang suggests spread along the Proto-Silk Road
Cited by: 7
Author(s): Xutong Wu, Chao Ning, Felix M. Key, Aida Andrades Valtueña, Aditya Kumar Lankapalli, Shizhu Gao, Yang Xuan, Fan Zhang, Linlin Liu, Zhongzhi Nie, Jian Ma, Johannes Krause, Alexander Herbig, Yinqiu Cui
Software Mentions: 2
Published: about 3 years ago

10.1186/s12859-021-04345-8

The regulatory pattern of target gene expression by aberrant enhancer methylation in glioblastoma
Cited by: 4
Author(s): Xiaoxiao Zhao, Jianghuai Ji, Wang Shi-jia, Rendong Wang, Qiuhong Yu, Dongguo Li
Software Mentions: 2
Published: about 3 years ago

10.1186/s40813-020-00166-y

Quantification, description and international comparison of antimicrobial use on Irish pig farms
Cited by: 14
Author(s): Lorcan O’Neill, Maria Rodrigues da Costa, Finola C. Leonard, J. F. Gibbons, Julia Adriana Calderón Díaz, Gerard McCutcheon, Edgar García Manzanilla
Software Mentions: 2
Published: about 4 years ago

10.1016/j.psj.2020.11.074

Effects of monobutyrin supplementation on egg production, biochemical indexes, and gut microbiota of broiler breeders
Cited by: 3
Author(s): Xin Feng, Fangang Kong, Liwei Zheng, Qien Qi, Lina Long, Li Gong, Weilong Huang, Huihua Zhang
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12859-019-3173-y

EvoFreq: visualization of the Evolutionary Frequencies of sequence and model data
Cited by: 15
Author(s): Chandler D. Gatenbee, Ryan O. Schenck, Rafael Bravo, Alexander R.A. Anderson
Software Mentions: 2
Published: about 5 years ago

10.1016/j.prevetmed.2017.12.007

Co-infection with Fasciola hepatica may increase the risk of Escherichia coli O157 shedding in British cattle destined for the food chain
Cited by: 10
Author(s): Alison Howell, Sue C. Tongue, Colin Currie, J. Evans, Diana Williams, Tom N. McNeilly
Software Mentions: 2
Published: almost 7 years ago

10.18632/aging.103362

Serum metabolites associate with physical performance among middle-aged adults: Evidence from the Bogalusa Heart Study
Cited by: 10
Author(s): Jovia L. Nierenberg, Jiang He, Changwei Li, Xiaoqing Gu, Mengyao Shi, Alexander C. Razavi, Xuenan Mi, Shengxu Li, Lydia A. Bazzano, Amanda H. Anderson, Hua He, Wei Chen, Jack M. Guralnik, Jason M. Kinchen, Tanika N. Kelly
Software Mentions: 2
Published: over 4 years ago

10.1186/1471-2105-15-15

OncomiRdbB: a comprehensive database of microRNAs and their targets in breast cancer
Cited by: 16
Author(s): Rimpi Khurana, Vinod Kumar Verma, Abdul Rawoof, Shrish Tiwari, Rekha A. Nair, Ganesh Mahidhara, Mohammed M. Idris, Alan R. Clarke, Lekha Dinesh Kumar
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12859-020-03589-0

imputeqc: an R package for assessing imputation quality of genotypes and optimizing imputation parameters
Cited by: 9
Author(s): Gennady V. Khvorykh, Andrey Khrunin
Software Mentions: 2
Published: over 4 years ago

10.1098/rspb.2018.0506

Low dose of neonicotinoid insecticide reduces foraging motivation of bumblebees
Cited by: 50
Author(s): Juho Lämsä, Erno Kuusela, Juha Tuomi, Sini Juntunen, Phillip C. Watts
Software Mentions: 2
Published: over 6 years ago

10.1098/rspb.2019.1867

Space–time dynamics of a triple epidemic: dengue, chikungunya and Zika clusters in the city of Rio de Janeiro
Cited by: 32
Author(s): Laís Picinini Freitas, Oswaldo Gonçalves Cruz, Rachel Lowe, Marília Sá Carvalho
Software Mentions: 2
Published: about 5 years ago

10.1186/s12859-015-0625-x

Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm
Cited by: 17
Author(s): Theodore Gibbons, Stephen M. Mount, Endymion D. Cooper, Charles F. Delwiche
Software Mentions: 2
Published: over 9 years ago

10.1098/rspb.2020.1184

Symbionts shape host innate immunity in honeybees
Cited by: 46
Author(s): Richard D. Horak, Sean P. Leonard, Nancy A. Moran
Software Mentions: 2
Published: over 4 years ago

10.1098/rspb.2020.1554

Familiarity breeds success: pairs that meet earlier experience increased breeding performance in a wild bird population
Cited by: 10
Author(s): Antica Culina, Josh A. Firth, Camilla A. Hinde
Software Mentions: 2
Published: almost 4 years ago

10.1098/rspb.2020.1684

Parasitic wasps avoid ant-protected hemipteran hosts via the detection of ant cuticular hydrocarbons
Cited by: 8
Author(s): Angelos Mouratidis, Sandra Vacas, Julieta Herrero, Vicente Navarro‐Llopis, Marcel Dicke, Alejandro Tena
Software Mentions: 2
Published: almost 4 years ago

10.1098/rspb.2021.0820

The Goldilocks effect: female geladas in mid-sized groups have higher fitness
Cited by: 3
Author(s): Elizabeth Tinsley Johnson, Jacob Feder, Thore J. Bergman, Amy Lu, Noah Snyder‐Mackler, Jacinta C. Beehner
Software Mentions: 2
Published: over 3 years ago

10.1186/s12871-018-0646-x

Prediction of postoperative mortality in elderly patient with hip fractures: a single-centre, retrospective cohort study
Cited by: 18
Author(s): Romain Niessen, Benoît Bihin, Maximilien Gourdin, Jean Cyr Yombi, Olivier Cornu, Patrice Forget
Software Mentions: 2
Published: about 6 years ago

10.1098/rspb.2021.0579

Lifetime reproductive benefits of cooperative polygamy vary for males and females in the acorn woodpecker ( Melanerpes formicivorus )
Cited by: 4
Author(s): Sahas Barve, Christina Riehl, Eric L. Walters, Joseph Haydock, Hannah L. Dugdale, Walter D. Koenig
Software Mentions: 2
Published: over 3 years ago

10.1073/pnas.1816964115

Fluctuating selection on migrant adaptive sodium transporter alleles in coastal Arabidopsis thaliana
Cited by: 44
Author(s): John Danku, Pirita Paajanen, Sarah Marburger, Sian Bray, Xin‐Yuan Huang, Charlotte Poschenrieder, Levi Yant, David E. Salt
Software Mentions: 2
Published: almost 6 years ago

10.1073/pnas.1814487116

Diversity partitioning in Phanerozoic benthic marine communities
Cited by: 19
Author(s): Richard Hofmann, Melanie Tietje, Martin Aberhan
Software Mentions: 2
Published: almost 6 years ago

10.1073/pnas.1911880116

Intrinsic elasticity of nucleosomes is encoded by histone variants and calibrated by their binding partners
Cited by: 37
Author(s): Daniël P. Melters, Mary Pitman, Tatini Rakshit, Emilios K. Dimitriadis, Minh Bui, Garegin A. Papoian, Yamini Dalal
Software Mentions: 2
Published: about 5 years ago

10.1073/pnas.2009053117

Male reproductive aging arises via multifaceted mating-dependent sperm and seminal proteome declines, but is postponable in Drosophila
Cited by: 35
Author(s): Irem Sepil, Ben R. Hopkins, Rebecca Dean, Eleanor Bath, Solomon Friedman, B.F. Swanson, Harrison J Ostridge, Lucy Harper, Norene A. Buehner, Mariana F. Wolfner, Rebecca Konietzny, Marie‐Laëtitia Thézénas, Elizabeth Sandham, P. David Charles, Román Fischer, Josefa Steinhauer, Benedikt M. Kessler, Stuart Wigby
Software Mentions: 2
Published: over 4 years ago

10.1259/bjrcr.20190122

Advanced multimodality MR imaging of a cerebral nocardiosis abscess in an immunocompetent patient with a focus on Amide Proton Transfer weighted imaging
Cited by: 3
Author(s): Elisabeth Sartoretti, Thomas Sartoretti, Annina Gutzwiller, Urs Karrer, Christoph A. Binkert, Arash Najafi, David Czell, Simon Beyeler, Sabine Sartoretti‐Schefer
Software Mentions: 2
Published: over 4 years ago

10.1073/pnas.2022928118

Signatures of immune dysfunction in HIV and HCV infection share features with chronic inflammation in aging and persist after viral reduction or elimination
Cited by: 16
Author(s): Cesar J. L. Angel, Edward A. Pham, Huixun Du, Francesco Vallania, Benjamin Fram, Kevin Pérez, Thai Nguyen, Yael Rosenberg-Hasson, Aijaz Ahmed, Cornelia L. Dekker, Philip Grant, Purvesh Khatri, Holden T. Maecker, Jeffrey S. Glenn, Mark M. Davis, David Furman
Software Mentions: 2
Published: over 3 years ago

10.1155/2018/9856910

Relationships among Antibodies against Extractable Nuclear Antigens, Antinuclear Antibodies, and Autoimmune Diseases in a Brazilian Public Hospital
Cited by: 12
Author(s): Fernanda Weyand Banhuk, Bruna Corrêa Pahim, Alex Sandro Jorge, Rafael Andrade Menolli
Software Mentions: 2
Published: about 6 years ago

10.1007/s13238-020-00740-8

Generation of a Hutchinson–Gilford progeria syndrome monkey model by base editing
Cited by: 44
Author(s): Fang Wang, Weiqi Zhang, Qiong Yang, Yu Kang, Yanling Fan, Jingkuan Wei, Zunpeng Liu, Shao‐Xing Dai, Hao Li, Zifan Li, Lizhu Xu, Chu Chu, Jing Qu, Chenyang Si, Weizhi Ji, Guanghui Liu, Chengzu Long, Yuyu Niu
Software Mentions: 2
Published: over 4 years ago

10.1002/aur.1886

Auditory brainstem response in infants and children with autism spectrum disorder: A meta-analysis of wave V
Cited by: 34
Author(s): Oren Miron, Andrew L. Beam, Isaac S. Kohane
Software Mentions: 2
Published: about 7 years ago

10.1002/advs.202003164

Temporarily Epigenetic Repression in Bergmann Glia Regulates the Migration of Granule Cells
Cited by: 2
Author(s): Shaoxuan Chen, Kunkun Zhang, Boxin Zhang, Mengyun Jiang, Xue Zhang, Yi Guo, Yingying Yu, Tianyu Qin, Hongda Li, Qiang Chen, Zhiyu Cai, Site Luo, Yi Huang, Haixia Jin, Wei Mo
Software Mentions: 2
Published: over 3 years ago

10.1002/art.40849

Prioritization of <scp>PLEC</scp> and <scp>GRINA</scp> as Osteoarthritis Risk Genes Through the Identification and Characterization of Novel Methylation Quantitative Trait Loci
Cited by: 30
Author(s): S.J. Rice, M. Tselepi, Antony K. Sorial, G. Aubourg, Colin Shepherd, David Almarza, Andrew Skelton, Ioanna Pangou, David J. Deehan, Louise N. Reynard, John Loughlin
Software Mentions: 2
Published: over 5 years ago

10.1002/art.41156

Polyfunctional, Proinflammatory, Tissue‐Resident Memory Phenotype and Function of Synovial Interleukin‐17A+ <scp>CD</scp> 8+ T Cells in Psoriatic Arthritis
Cited by: 73
Author(s): Kathryn J A Steel, Ushani Srenathan, Michael Ridley, Lucy E Durham, Soon‐Yi Wu, Sarah Ryan, Christopher R. Hughes, Estee Chan, Bruce Kirkham, Leonie S. Taams
Software Mentions: 2
Published: almost 5 years ago

10.3758/s13423-016-1124-4

Fixation durations in scene viewing: Modeling the effects of local image features, oculomotor parameters, and task
Cited by: 64
Author(s): Antje Nuthmann
Software Mentions: 2
Published: over 8 years ago

10.2196/26646

Future Medical Artificial Intelligence Application Requirements and Expectations of Physicians in German University Hospitals: Web-Based Survey
Cited by: 35
Author(s): Oliver Maaßen, Sebastian Fritsch, Julia Palm, Saskia Deffge, J. Kunze, Gernot Marx, Morris Riedel, Andreas Schuppert, Johannes Bickenbach
Software Mentions: 2
Published: almost 4 years ago

10.1186/s13075-021-02625-5

Integrative analysis of genome-wide DNA methylation and single-nucleotide polymorphism identified ACSM5 as a suppressor of lumbar ligamentum flavum hypertrophy
Cited by: 6
Author(s): Yanlin Cao, Ye-Nan Zhan, Sujun Qiu, Zhong Chen, Kaiqin Gong, Songjia Ni, Yang Duan
Software Mentions: 2
Published: about 3 years ago

10.1080/15476286.2019.1667741

Systematic assessment of commercially available low-input miRNA library preparation kits
Cited by: 26
Author(s): Fatima Heinicke, Xiao Zhong, Manuela Zucknick, Johannes Breidenbach, Arvind Sundaram, Siri Tennebø Flåm, Magnus Leithaug, Marianne Dalland, Andrew Farmer, Jordana M. Henderson, Melanie Hussong, Pamela Renate Moll, Lan Nguyễn, Amanda McNulty, James Shaffer, Sabrina Shore, Hoichong Karen Yip, Jana Vitkovska, Simon Rayner, Benedicte A. Lie, Gregor D. Gilfillan
Software Mentions: 2
Published: about 5 years ago

10.1186/s13075-019-1934-7

Expression analysis of the osteoarthritis genetic susceptibility mapping to the matrix Gla protein gene MGP
Cited by: 25
Author(s): Colin Shepherd, Abigail E. Reese, Louise N. Reynard, John Loughlin
Software Mentions: 2
Published: over 5 years ago

10.1038/srep14017

An isomorphous replacement method for efficient de novo phasing for serial femtosecond crystallography
Cited by: 51
Author(s): Keitaro Yamashita, Dongqing Pan, Tomohiko Okuda, Michihiro Sugahara, Atsushi Kodan, Tomohiro Yamaguchi, Taichi Murai, Keiko Gomi, Naoki Kajiyama, Eiichi Mizohata, Mamoru Suzuki, Eriko Nango, Kensuke Tono, Yasumasa Joti, Takashi Kameshima, Jaehyun Park, Changyong Song, Takaki Hatsui, Makina Yabashi, So Iwata, Hiroaki Kato, Hideo Ago, Masaki Yamamoto, Toru Nakatsu
Software Mentions: 2
Published: about 9 years ago

10.1038/srep14929

Specific binding of eukaryotic ORC to DNA replication origins depends on highly conserved basic residues
Cited by: 25
Author(s): Hironori Kawakami, Eiji Ohashi, Shota Kanamoto, Toshiki Tsurimoto, Tsutomu Katayama
Software Mentions: 2
Published: about 9 years ago

10.1038/srep16899

Quantifying the Impact of Scenic Environments on Health
Cited by: 69
Author(s): Chanuki Illushka Seresinhe, Tobias Preis, Helen Susannah Moat
Software Mentions: 2
Published: about 9 years ago

10.1038/srep20650

Feature co-localization landscape of the human genome
Cited by: 11
Author(s): Siu-Kin Ng, Taobo Hu, Xi Long, Colin Chan, Suk Ying Tsang, Hong Xue
Software Mentions: 2
Published: almost 9 years ago

10.2196/jmir.6533

Supervised Machine Learning Algorithms Can Classify Open-Text Feedback of Doctor Performance With Human-Level Accuracy
Cited by: 41
Author(s): Chris Gibbons, Suzanne H Richards, José M Valderas, John Campbell
Software Mentions: 2
Published: over 7 years ago

10.1038/srep23173

Spatiotemporal transcriptome provides insights into early fruit development of tomato (Solanum lycopersicum)
Cited by: 37
Author(s): Shuaibin Zhang, Meng Xu, Zhengkun Qiu, Ketao Wang, Yan Du, Lianfeng Gu, Xia Cui
Software Mentions: 2
Published: over 8 years ago

10.1038/srep22958

Bacterial communities of the cotton aphid Aphis gossypii associated with Bt cotton in northern China
Cited by: 42
Author(s): Yao Zhao, Shuai Zhang, Junyu Luo, Chunyi Wang, Limin Lv, Jinjie Cui
Software Mentions: 2
Published: over 8 years ago

10.1002/advs.201902295

Developmentally Engineered Callus Organoid Bioassemblies Exhibit Predictive In Vivo Long Bone Healing
Cited by: 86
Author(s): Gabriella Nilsson Hall, Luís Mendes, Charikleia Gklava, Liesbet Geris, Frank P. Luyten, Ioannis Papantoniou
Software Mentions: 2
Published: almost 5 years ago

10.1038/srep26371

The molecular spectrum and distribution of haemoglobinopathies in Cyprus: a 20-year retrospective study
Cited by: 33
Author(s): Petros Kountouris, Ioanna Kousiappa, Thessalia Papasavva, George Christopoulos, Eleni Pavlou, Miranda Petrou, Xenia Feleki, Eleni Karitzie, Marios Phylactides, Pavlos Fanis, Carsten W. Lederer, Andriani Kyrri, Eleni Kalogerou, Christiana Makariou, Christiana Ioannou, Loukas Kythreotis, Georgia Hadjilambi, Nicoletta Andreou, Evangelia Pangalou, Irene Savvidou, Michael Angastiniotis, Michael Hadjigavriel, Maria Sitarou, Annita Kolnagou, Marina Kleanthous, Soteroula Christou
Software Mentions: 2
Published: over 8 years ago

10.1038/srep26311

Respiratory Syncytial Virus whole-genome sequencing identifies convergent evolution of sequence duplication in the C-terminus of the G gene
Cited by: 70
Author(s): Seth Schobel, Karla M. Stucker, Martin L. Moore, Larry J. Anderson, Emma K. Larkin, Jyoti Shankar, Jayati Bera, Vinita Puri, Meghan H. Shilts, Christian Rosas‐Salazar, Rebecca Halpin, Nadia Fedorova, Susmita Shrivastava, Timothy B. Stockwell, R. Stokes Peebles, Tina V. Hartert, Suman Das
Software Mentions: 2
Published: over 8 years ago

10.2196/18234

A Rapid Electronic Cognitive Assessment Measure for Multiple Sclerosis: Validation of Cognitive Reaction, an Electronic Version of the Symbol Digit Modalities Test
Cited by: 7
Author(s): Rod Middleton, Owen Pearson, Gillian Ingram, Elaine Craig, Jeff Rodgers, Hannah Downing-Wood, Joseph Hill, Katie Tuite-Dalton, Christopher Roberts, Lynne Watson, David Ford, Richard Nicholas
Software Mentions: 2
Published: about 4 years ago

10.1038/srep30164

SCUBA divers as oceanographic samplers: The potential of dive computers to augment aquatic temperature monitoring
Cited by: 29
Author(s): Serena Wright, Tom Hull, D. B. Sivyer, David J. Pearce, John K. Pinnegar, Martin Sayer, Andrew O.M. Mogg, Elaine Azzopardi, Steve Gontarek, Kieran Hyder
Software Mentions: 2
Published: over 8 years ago

10.1038/srep31857

High-fat diet disrupts metabolism in two generations of rats in a parent-of-origin specific manner
Cited by: 35
Author(s): Thomas K. Chambers, Michael D. Morgan, Andreas Heger, Richard M. Sharpe, Amanda J. Drake
Software Mentions: 2
Published: over 8 years ago

10.1038/srep32027

Prognostic significance of nuclear expression of UMP-CMP kinase in triple negative breast cancer patients
Cited by: 12
Author(s): Ning Qing Liu, Tommaso De Marchi, Annemieke M. Timmermans, Anita M A C Trapman-Jansen, Renée Foekens, Maxime P. Look, Marcel Smid, Carolien H.M. van Deurzen, Paul N. Span, Fred C.G.J. Sweep, Julie Benedicte Brask, Vera Timmermans-Wielenga, John A. Foekens, John W.M. Martens, Arzu Umar
Software Mentions: 2
Published: over 8 years ago

10.1038/srep32598

Emergence and evolution of inter-specific segregating retrocopies in cynomolgus monkey (Macaca fascicularis) and rhesus macaque (Macaca mulatta)
Cited by: 2
Author(s): Xu Zhang, Zhilin Qu, Bing Su
Software Mentions: 2
Published: about 8 years ago

10.18632/oncotarget.9859

UCN-01 enhances cytotoxicity of irinotecan in colorectal cancer stem-like cells by impairing DNA damage response
Cited by: 16
Author(s): Michele Signore, Mariachiara Buccarelli, Emanuela Pilozzi, Gabriele De Luca, Marianna Cappellari, Maurizio Fanciulli, Frauke Goeman, Elisa Melucci, Mauro Biffoni, Lucia Ricci‐Vitiani
Software Mentions: 2
Published: over 8 years ago

10.1038/srep38302

Catalysis and Structure of Zebrafish Urate Oxidase Provide Insights into the Origin of Hyperuricemia in Hominoids
Cited by: 20
Author(s): Marialaura Marchetti, Anastasia Liuzzi, Beatrice Fermi, Romina Corsini, Claudia Folli, Valentina Speranzini, Francesco Gandolfi, Stefano Bettati, Luca Ronda, Laura Cendron, Rodolfo Berni, Giuseppe Zanotti, Riccardo Percudani
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep40519

Population expansions dominate demographic histories of endemic and widespread Pacific reef fishes
Cited by: 32
Author(s): Erwan Delrieu‐Trottin, Stefano Mona, Jeffrey Maynard, Valentina Neglia, Michel Veuille, Serge Planes
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep41748

Genome-wide association study for performance traits in chickens using genotype by sequencing approach
Cited by: 23
Author(s): Fábio Pértille, Gabriel Costa Monteiro Moreira, Ricardo Zanella, José de Ribamar da Silva Nunes, Clarissa Boschiero, Gregorí Alberto Rovadoscki, Gérson Barreto Mourão, Mônica Corrêa Ledur, Luiz Lehmann Coutinho
Software Mentions: 2
Published: almost 8 years ago

10.1002/aps3.1207

EyeChrom and CCDBcurator: Visualizing chromosome count data from plants
Cited by: 10
Author(s): Rodrigo Rivero, Emily B. Sessa, Rosana Zenil‐Ferguson
Software Mentions: 2
Published: almost 6 years ago

10.1038/srep43747

The genome of Leishmania adleri from a mammalian host highlights chromosome fission in Sauroleishmania
Cited by: 33
Author(s): Simone Coughlan, Peter O. Mulhair, Mandy Sanders, Gabriele Schönian, James A. Cotton, Tim Downing
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep43261

Prolonged high-fat diet induces gradual and fat depot-specific DNA methylation changes in adult mice
Cited by: 36
Author(s): Ramona A J Zwamborn, Roderick C. Slieker, Petra Mulder, Inge Zoetemelk, Lars Verschuren, H. Eka D. Suchiman, Karin Toet, S. Droog, P. Eline Slagboom, Teake Kooistra, Robert Kleemann, Bastiaan T. Heijmans
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep45365

Epigenome mapping highlights chromatin-mediated gene regulation in the protozoan parasite Trichomonas vaginalis
Cited by: 12
Author(s): Min Song, Mi-Kyoung Kim, Yun Young Choi, Myung‐hee Yi, Juri Kim, Soon‐Jung Park, Tai Soon Yong, Hyoung‐Pyo Kim
Software Mentions: 2
Published: over 7 years ago

10.2196/jmir.9738

Expert Coaching in Weight Loss: Retrospective Analysis
Cited by: 19
Author(s): Stefanie Painter, Rezwan Ahmed, Robert F. Kushner, James O. Hill, R R Lindquist, Scott Brunning, Amy Margulies
Software Mentions: 2
Published: over 6 years ago

10.1038/srep46148

An unbiased index to quantify participant’s phenotypic contribution to an open-access cohort
Cited by: 6
Author(s): Yingleong Chan, Michael Tung, Alexander S. Garruss, Sarah W. Zaranek, Ying Chan, Jeantine E. Lunshof, Alexander Wait Zaranek, Madeleine Ball, Michael F. Chou, Elaine T. Lim, George M. Church
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-00171-2

Exploring the microbial community (microflora) associated with ovine Haemonchus contortus (macroflora) field strains
Cited by: 22
Author(s): Saeed El‐Ashram, Xun Suo
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-017-01856-4

Establishment of a Strong Link Between Smoking and Cancer Pathogenesis through DNA Methylation Analysis
Cited by: 57
Author(s): Yunlong Ma, Ming D. Li
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-03975-4

Postprandial metabolic response of breast-fed infants and infants fed lactose-free vs regular infant formula: A randomized controlled trial
Cited by: 38
Author(s): Carolyn M. Slupsky, Xuan He, Olle Hernell, Yvonne Andersson, Colin D. Rudolph, Bo Lönnerdal, Christina West
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-03918-z

Insecticide susceptibility of Anopheles mosquitoes changes in response to variations in the larval environment
Cited by: 45
Author(s): Henry F. Owusu, Nakul Chitnis, Pie Müller
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-04751-0

The temporal dependence of exploration on neotic style in birds
Cited by: 32
Author(s): Mark O’Hara, Berenika Mioduszewska, Auguste Marie Philippa von Bayern, Alice M. I. Auersperg, Thomas Bugnyar, Anna Wilkinson, Ludwig Huber, Gyula K. Gajdon
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-04708-3

Climate Classification is an Important Factor in Assessing Quality-of-Care Across Hospitals
Cited by: 10
Author(s): Mary Regina Boland, Pradipta Parhi, Pierre Gentine, Nicholas P. Tatonetti
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-05662-w

Vertically and horizontally transmitted microbial symbionts shape the gut microbiota ontogenesis of a skin-mucus feeding discus fish progeny
Cited by: 59
Author(s): François‐Étienne Sylvain, Nicolas Derôme
Software Mentions: 2
Published: over 7 years ago

10.1128/AEM.02459-20

A Postbiotic Consisting of Heat-Treated Lactobacilli Has a Bifidogenic Effect in Pure Culture and in Human Fermented Fecal Communities
Cited by: 14
Author(s): Alicja K. Warda, Adam G. Clooney, Feargal J. Ryan, Pedro H. de Almeida Bettio, Giulio Di Benedetto, R. Paul Ross, Colin Hill
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-017-06082-6

Thresholds of biodiversity and ecosystem function in a forest ecosystem undergoing dieback
Cited by: 13
Author(s): Paul M. Evans, Adrian C. Newton, Elena Cantarello, Philip A. Martin, Neil Sanderson, Davey L. Jones, Nadia Barsoum, Joan Cottrell, Stuart W. A’Hara, Lauren Fuller
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-07062-6

Genomewide Analysis of Clp1 Function in Transcription in Budding Yeast
Cited by: 2
Author(s): Nadra Al-Husini, Ali Sharifi, Seyed Ahmad Mousavi, Hamidreza Chitsaz, Athar Ansari
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-07241-5

In silico analyses of conservational, functional and phylogenetic distribution of the LuxI and LuxR homologs in Gram-positive bacteria
Cited by: 31
Author(s): Abhishek Rajput, Manoj Kumar
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-07278-6

Bacteriophages as potential new mammalian pathogens
Cited by: 74
Author(s): George Tetz, Kelly V. Ruggles, Hua Zhou, Adriana Heguy, Aristotelis Tsirigos, Victor Tetz
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-08146-z

Decadal trends in Red Sea maximum surface temperature
Cited by: 133
Author(s): Veronica Chaidez, Denis Dreano, Susana Agustı́, Carlos M. Duarte, Ibrahim Hoteit
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-09430-8

Cerium oxide nanoparticles inhibit differentiation of neural stem cells
Cited by: 59
Author(s): Anda R. Gliga, Karin Edoff, Fanny Caputo, Thomas Källman, Hans Blom, Hanna Karlsson, Lina Ghibelli, Enrico Traversa, Sandra Ceccatelli, Bengt Fadeel
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-017-11159-3

Selection for energy efficiency drives strand-biased gene distribution in prokaryotes
Cited by: 11
Author(s): Na Gao, Guanting Lu, Martin J. Lercher, Weihua Chen
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-017-10640-3

Riparian plant litter quality increases with latitude
Cited by: 50
Author(s): Luz Boyero, Manuel A. S. Graça, Alan M. Tonin, Javier Jiménez Pérez, Austin D. Swafford, Verónica Ferreira, Andrea Landeira-Dabarca, Markos A. Alexandrou, Mark O. Gessner, Brendan G. McKie, Ricardo Albariño, Leon A. Barmuta, Marcos Callisto, Julián Chará, Éric Chauvet, Checo Colón-Gaud, David Dudgeon, Andrea C. Encalada, Ricardo Figueroa, Alexander S. Flecker, Tadeusz Fleituch, André Frainer, José F. Gonçalves, Julie E. Helson, Tomoya Iwata, Jude M. Mathooko, Charles Mwithali M’Erimba, Catherine M. Pringle, Alonso Ramírez, Christopher M. Swan, Catherine M. Yule, Richard G. Pearson
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-017-10723-1

Improving understanding of the functional diversity of fisheries by exploring the influence of global catch reconstruction
Cited by: 9
Author(s): Kirsty L. Nash, Reg Watson, Benjamin S. Halpern, Elizabeth A. Fulton, Julia L. Blanchard
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-018-30891-y

Investigating the role of landscape composition on honey bee colony winter mortality: A long-term analysis
Cited by: 20
Author(s): Sabrina Kuchling, Ian Kopacka, Elfriede Kalcher-Sommersguter, Michael P. Schwarz, Karl Crailsheim, Robert Brodschneider
Software Mentions: 2
Published: over 6 years ago

Projects: cran: ggplot2

Papers Mentioning ggplot2 11,441