cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.15252/embj.201489852

Nuclear matrix protein Matrin3 regulates alternative splicing and forms overlapping regulatory networks with <scp>PTB</scp>
Cited by: 118
Author(s): Miguel B. Coelho, Jan Attig, Nicolás Bellora, Julian König, Martina Hallegger, Melis Kayikci, Eduardo Eyras, Jernej Ule, Christopher W. Smith
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-019-46904-3

Co-cultivation of the marine sponge Halichondria panicea and its associated microorganisms
Cited by: 16
Author(s): Stephen Knobloch, Ragnar Jóhannsson, V. Marteinsson
Software Mentions: 2
Published: about 7 years ago

10.1016/j.ebiom.2015.11.034

Analysis of B Cell Repertoire Dynamics Following Hepatitis B Vaccination in Humans, and Enrichment of Vaccine-specific Antibody Sequences
Cited by: 78
Author(s): Jacob D. Galson, Johannes Trück, Anna Fowler, Elizabeth A. Clutterbuck, Márton Münz, Vincenzo Cerundolo, Claudia Reinhard, Robbert van der Most, Andrew J. Pollard, Gerton Lunter, Dominic F. Kelly
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-019-46735-2

AAV GCG-EGFP, a new tool to identify glucagon-secreting α-cells
Cited by: 6
Author(s): Eva Tudurí, Maria M. Glavas, Ali Asadi, Robert K. Baker, Cara Ellis, Galina Soukhatcheva, Marjolaine Philit, Frank K. Huynh, James D. Johnson, C. Bruce Verchere, Timothy J. Kieffer
Software Mentions: 2
Published: about 7 years ago

10.1016/j.ebiom.2021.103228

Evaluating the effects of cardiometabolic exposures on circulating proteins which may contribute to severe SARS-CoV-2
Cited by: 14
Author(s): Tom G Richardson, Shiqiang Fang, Ruth Mitchell, Michael V. Holmes, George Davey Smith
Software Mentions: 2
Published: over 5 years ago

10.1242/dmm.044404

Quantitative single-cell interactomes in normal and virus-infected mouse lungs
Cited by: 13
Author(s): Margo P. Cain, Belinda Hernández, Jichao Chen
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-48059-7

Alterations in lipid metabolism of spinal cord linked to amyotrophic lateral sclerosis
Cited by: 84
Author(s): Adriano B. Chaves‐Filho, Isabella Fernanda Dantas Pinto, Lucas S. Dantas, André Machado Xavier, Alex Inague, Rodrigo L. Faria, Marisa Helena Gennari de Medeiros, Isaías Glezer, Marcos Yukio Yoshinaga, Sayuri Miyamoto
Software Mentions: 2
Published: about 7 years ago

10.1242/dmm.047746

Metabolomics and lipidomics in Caenorhabditis elegans using a single-sample preparation
Cited by: 20
Author(s): Marte Molenaars, Bauke V. Schomakers, Hyung L. Elfrink, Arwen W. Gao, Martin A. T. Vervaart, Mia L. Pras‐Raves, Angela C. M. Luyf, Reuben L. Smith, Mark G. Sterken, J.E. Kammenga, Antoine H. C. van Kampen, Georges E. Janssens, Frédéric M. Vaz, Michel van Weeghel, Riekelt H. Houtkooper
Software Mentions: 2
Published: over 5 years ago

10.1155/2021/6682697

Identification of Prognostic and Therapeutic Biomarkers among FAM83 Family Members for Pancreatic Ductal Adenocarcinoma
Cited by: 6
Author(s): Zuyi Ma, Zixuan Zhou, Hongkai Zhuang, Zhenchong Li, Zuguang Ma, Bowen Huang, Chunsheng Liu, Yuanfeng Gong, Yiping Zou, Zehao Zheng, Shanzhou Huang, Chuanzhao Zhang, Baohua Hou
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-48434-4

Analysis of the TCR Repertoire in HIV-Exposed but Uninfected Infants
Cited by: 18
Author(s): Benjamin Gabriel, Carey L. Medin, Jeremiah Alves, Ruth Nduati, Rose Bosire, Dalton Wamalwa, Carey Farquhar, Grace John‐Stewart, Barbara Lohman-Payne
Software Mentions: 2
Published: about 7 years ago

10.1155/2019/1569049

Expression of La Ribonucleoprotein Domain Family Member 4B (LARP4B) in Liver Cancer and Their Clinical and Prognostic Significance
Cited by: 11
Author(s): Yanqing Li, Yan Jiao, Yang Li, Yanan Liu
Software Mentions: 2
Published: almost 7 years ago

10.3390/ijms221910666

In Silico Study of the RSH (RelA/SpoT Homologs) Gene Family and Expression Analysis in Response to PGPR Bacteria and Salinity in Brassica napus
Cited by: 8
Author(s): Grażyna B. Dąbrowska, Sena Turkan, Wioleta Tylman-Mojżeszek, Agnieszka Mierek‐Adamska
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-019-49051-x

Investigating Effects of Typographic Variables on Webpage Reading Through Eye Movements
Cited by: 6
Author(s): Michele Scaltritti, Aliaksei Miniukovich, Paola Venuti, Remo Job, Antonella De Angeli, Simone Sulpizio
Software Mentions: 2
Published: almost 7 years ago

10.3390/diagnostics8030055

A Preliminary Study of Contrast-Enhanced Ultrasound (CEUS) and Cytokine Expression Analysis (CEA) as Early Predictors for the Outcome of Tibial Non-Union Therapy
Cited by: 7
Author(s): Patrick Haubruck, Raban Arved Heller, Michael C. Tanner, Volker Daniel, Gerhard Schmidmaier, Farhoud Bolourchi, Arash Moghaddam, Christian Fischer
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-019-49220-y

Plumage iridescence is associated with distinct feather microbiota in a tropical passerine
Cited by: 5
Author(s): Veronika Javůrková, Erik D Enbody, Jakub Kreisinger, Kryštof Chmel, Jakub Mrázek, Jordan Karubian
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-49389-2

A multiplex qPCR approach for detection of pfhrp2 and pfhrp3 gene deletions in multiple strain infections of Plasmodium falciparum
Cited by: 19
Author(s): Tobias Schindler, Anna Deal, Martina Fink, Etienne A Guirou, Kara A Moser, Solomon Mwakasungula, Michael G. Mihayo, Said Jongo, Prosper Chaki, Salim Abdulla, Paulo C. Manrique Valverde, Katherine Torres, José Raso Bijeri, Joana C. Silva, Stephen L. Hoffman, Dionicia Gamboa, Marcel Tanner, Claudia Daubenberger
Software Mentions: 2
Published: almost 7 years ago

10.1099/mgen.0.000594

gbpA and chiA genes are not uniformly distributed amongst diverse Vibrio cholerae
Cited by: 2
Author(s): Thea G. Fennell, Grace A. Blackwell, Nicholas R. Thomson, Matthew J. Dorman
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-019-49994-1

Oil exposure alters social group cohesion in fish
Cited by: 26
Author(s): Tiffany Armstrong, Alexis J. Khursigara, Shaun S. Killen, Hannah Fearnley, Kevin J. Parsons, Andrew J. Esbaugh
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-49966-5

The diversity and ecological roles of Penicillium in intertidal zones
Cited by: 25
Author(s): Myung Soo Park, Seung‐Yoon Oh, Jonathan J. Fong, Jos Houbraken, Young Woon Lim
Software Mentions: 2
Published: almost 7 years ago

10.1136/bmjopen-2020-042945

Hospital bed capacity and usage across secondary healthcare providers in England during the first wave of the COVID-19 pandemic: a descriptive analysis
Cited by: 22
Author(s): Bilal A. Mateen, Harrison Wilde, John Dennis, Andrew J. Duncan, Nick Thomas, Andrew McGovern, Spiros Denaxas, Matthew James Keeling, Sebastian J. Vollmer
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-49611-1

Mutation profiling of cancer drivers in Brazilian colorectal cancer
Cited by: 23
Author(s): Wellington dos Santos, Thais Sobanski, Ana Carolina de Carvalho, Adriane Feijó Evangelista, Marcus Matsushita, Gustavo Nóriz Berardinelli, Marco Antônio de Oliveira, Rui Manuel Reis, Denise Peixoto Guimarães
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-50344-4

Rice bran supplementation modulates growth, microbiota and metabolome in weaning infants: a clinical trial in Nicaragua and Mali
Cited by: 28
Author(s): Luis Enrique Zambrana, Starin McKeen, Hend Ibrahim, Iman Zarei, Erica C. Borresen, Lassina Doumbia, Abdoulaye Boré, Alima Cissoko, Seydou Douyon, Karim Koné, J García Pérez, Claudia Pérez, Ann Hess, Zaid Abdo, Lansana Sangaré, Ababacar Maïga, Sylvia Becker‐Dreps, Lijuan Yuan, Ousmane Koïta, Samuel Vílchez, Elizabeth P. Ryan
Software Mentions: 2
Published: almost 7 years ago

10.1093/texcom/tgab013

Neural Representations of Death in the Cortical Midline Structures Promote Temporal Discounting
Cited by: 1
Author(s): Kuniaki Yanagisawa, Emiko S. Kashima, Yayoi Shigemune, Ryusuke Nakai, Nobuhito Abe
Software Mentions: 2
Published: over 5 years ago

10.1093/texcom/tgaa043

Dynamic Modulation of Beta Band Cortico-Muscular Coupling Induced by Audio–Visual Rhythms
Cited by: 8
Author(s): Manuel Varlet, Sylvie Nozaradan, Laurel J. Trainor, Peter E. Keller
Software Mentions: 2
Published: over 6 years ago

10.3390/cells10051214

Sex-Specific Isolation and Propagation of Human Premeiotic Fetal Germ Cells and Germ Cell-Like Cells
Cited by: 11
Author(s): Swati Mishra, Jasin Taelman, Yolanda W. Chang, Annekatrien Boel, Petra De Sutter, Björn Heindryckx, Susana M. Chuva de Sousa Lopes
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-50575-5

Changes in the microsomal proteome of tomato fruit during ripening
Cited by: 17
Author(s): Daniela Pontiggia, Francesco Spinelli, Claudia Fabbri, Valerio Licursi, Rodolfo Negri, Giulia De Lorenzo, Benedetta Mattei
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-50529-x

Estimation of nephron number in living humans by combining unenhanced computed tomography with biopsy-based stereology
Cited by: 20
Author(s): Takaya Sasaki, Nobuyuki Tsuboi, Yusuke Okabayashi, Kotaro Haruhara, Go Kanzaki, Kentaro Koike, Adam Kobayashi, Izumi Yamamoto, Sho Takahashi, Toshiharu Ninomiya, Akira Shimizu, Andrew D. Rule, John F. Bertram, Takashi Yokoo
Software Mentions: 2
Published: almost 7 years ago

10.3390/cells9081789

Protamine-2 Deficiency Initiates a Reactive Oxygen Species (ROS)-Mediated Destruction Cascade during Epididymal Sperm Maturation in Mice
Cited by: 17
Author(s): Simon Schneider, Farhad Shakeri, Christian Trötschel, Lena Arévalo, Alexander Kruse, Andreas Buneß, Ansgar Poetsch, Klaus Steger, Hubert Schorle
Software Mentions: 2
Published: about 6 years ago

10.2196/12811

Identifying Attrition Phases in Survey Data: Applicability and Assessment Study
Cited by: 14
Author(s): Camille J. Hochheimer, Roy Sabo, Robert A. Perera, Nitai D. Mukhopadhyay, Alex H. Krist
Software Mentions: 2
Published: almost 7 years ago

10.3390/cells10061462

Single-Cell RNA-Seq Reveals Transcriptomic Heterogeneity and Post-Traumatic Osteoarthritis-Associated Early Molecular Changes in Mouse Articular Chondrocytes
Cited by: 35
Author(s): Aimy Sebastian, Jillian L. McCool, Nicholas R. Hum, Deepa K. Murugesh, Stephen Wilson, Blaine A. Christiansen, Gabriela G. Loots
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-019-50959-7

RNA sequencing for ligature induced periodontitis in mice revealed important role of S100A8 and S100A9 for periodontal destruction
Cited by: 18
Author(s): Shogo Maekawa, Satoru Onizuka, Seiji Katagiri, Masahiro Hatasa, Yujin Ohsugi, Naoki Sasaki, Kouichi Watanabe, Anri Ohtsu, Rina Komazaki, Kohei Ogura, Tohru Miyoshi‐Akiyama, Takanori Iwata, Hiroshi Nitta, Yuichi Izumi
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-50521-5

Organic mulches reduce crop attack by sweetpotato weevil (Cylas formicarius)
Cited by: 5
Author(s): Mudassir Rehman, Jian Liu, Anne C. Johnson, Taiwo Esther Dada, Geoff M. Gurr
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-51485-2

Expression regulation of myo-inositol 3-phosphate synthase 1 (INO1) in determination of phytic acid accumulation in rice grain
Cited by: 10
Author(s): Ishara Perera, Ayaka Fukushima, Tatsuki Akabane, Genki Horiguchi, Saman Seneweera, Naoki Hirotsu
Software Mentions: 2
Published: almost 7 years ago

10.3390/cells10010068

Limited Proteolysis-Coupled Mass Spectrometry Identifies Phosphatidylinositol 4,5-Bisphosphate Effectors in Human Nuclear Proteome
Cited by: 18
Author(s): Martin Sztacho, Barbora Šalovská, Jakub Červenka, Can Balaban, Peter Hoboth, Pavel Hozák
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-51834-1

Scaling the interactive effects of attractive and repellent odours for insect search behaviour
Cited by: 13
Author(s): Thomas A. Verschut, Mikael A. Carlsson, Peter A. Hambäck
Software Mentions: 2
Published: almost 7 years ago

10.3390/cells10092171

Addendum: Gouriou et al. ANT2-Mediated ATP Import into Mitochondria Protects against Hypoxia Lethal Injury. Cells 2020, 9, 2542
Cited by: 1
Author(s): Yves Gouriou, Muhammad Rizwan Alam, Zeina Harhous, Claire Crola Da Silva, Delphine Baetz, Sally Badawi, Étienne Lefai, Jennifer Rieusset, Annie Durand, Rania Harisseh, Abdallah Gharib, Michel Ovize, Gabriel Bidaux
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-019-52368-2

Microbial communities and soil chemical features associated with commercial production of the medicinal mushroom Ganoderma lingzhi in soil
Cited by: 7
Author(s): Kan Liao, Pu-Dong Li, Jianping Xu, Qiushuang Wang, Liangliang Wang, Hui-Ping Wen
Software Mentions: 2
Published: almost 7 years ago

10.3390/cells10020394

Genetically Raised Circulating Bilirubin Levels and Risk of Ten Cancers: A Mendelian Randomization Study
Cited by: 10
Author(s): Nazlisadat Seyed Khoei, Robert Carreras‐Torres, Neil Murphy, Marc J. Gunter, Paul Brennan, Karl Smith-Byrne, Daniela Mariosa, James McKay, Tracy A. O’Mara, Ruth F. Jarrett, Henrik Hjalgrim, Karin E. Smedby, Wendy Cozen, Kenan Onel, Arjan Diepstra, Karl‐Heinz Wagner, Heinz Freisling
Software Mentions: 2
Published: over 5 years ago

10.1136/bmjopen-2018-023989

Reducing antibiotic prescribing in primary care in England from 2014 to 2017: population-based cohort study
Cited by: 21
Author(s): Xiaohui Sun, Martin Gulliford
Software Mentions: 2
Published: about 7 years ago

10.3390/cells10040736

Control of Protein and Energy Metabolism in the Pituitary Gland in Response to Three-Week Running Training in Adult Male Mice
Cited by: 3
Author(s): Christina Walz, Julia Brenmoehl, Nares Trakooljul, Antonia Noce, Caroline Caffier, Daniela Ohde, Martina Langhammer, Klaus Wimmers, Siriluck Ponsuksili, Andreas Hoeflich
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-52585-9

A Frailty Index based on clinical data to quantify mortality risk in dogs
Cited by: 27
Author(s): Tommaso Banzato, Giovanni Franzo, Roberta Di Maggio, Elisa Nicoletto, Silvia Burti, Matteo Cesari, Marco Canevelli
Software Mentions: 2
Published: almost 7 years ago

10.1099/mgen.0.000315

Next-generation sequencing of dsRNA is greatly improved by treatment with the inexpensive denaturing reagent DMSO
Cited by: 7
Author(s): Alexander H. Wilcox, Eric Delwart, Samuel L. Díaz‐Muñoz
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-53362-4

Steroid hormones in hair reveal sexual maturity and competition in wild house mice (Mus musculus domesticus)
Cited by: 16
Author(s): Esther H.D. Carlitz, Jan‐Niklas Runge, Barbara König, Lennart Winkler, Clemens Kirschbaum, Wei Gao, Anna K. Lindholm
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-53563-x

The Prognostic Significance of PDE7B in Cytogenetically Normal Acute Myeloid Leukemia
Cited by: 10
Author(s): Lu Cao, Weilong Zhang, Xiaoni Liu, Ping Yang, Jing Wang, Kai Hu, Xiuru Zhang, Weiyou Liu, Xue He, Hongmei Jing, Xiaoliang Yuan
Software Mentions: 2
Published: almost 7 years ago

10.3390/cells9061560

Mistletoe-Extract Drugs Stimulate Anti-Cancer Vγ9Vδ2 T Cells
Cited by: 8
Author(s): Lifang Ma, Swati Phalke, Caroline Stévigny, Florence Souard, David Vermijlen
Software Mentions: 2
Published: about 6 years ago

10.3390/cells10010005

Depletion of Embryonic Macrophages Leads to a Reduction in Angiogenesis in the Ex Ovo Chick Chorioallantoic Membrane Assay
Cited by: 6
Author(s): Hanna Tay, Charis Du Cheyne, Kristel Demeyere, Jurgen De Craene, Lobke De Bels, Evelyne Meyer, Andries Zijlstra, Ward De Spiegelaere
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-54282-z

A stroma-corrected ZEB1 transcriptional signature is inversely associated with antitumor immune activity in breast cancer
Cited by: 17
Author(s): Christoph Block, Gregory Dyson, Ion J. Campeanu, Donovan Watza, Manohar Ratnam, Guojun Wu
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-54819-2

The consequences of Brugia malayi infection on the flight and energy resources of Aedes aegypti mosquitoes
Cited by: 8
Author(s): Alastair G. T. Somerville, Katherine Gleave, Christopher M. Jones, Lisa J. Reimer
Software Mentions: 2
Published: over 6 years ago

10.3390/cells8040306

Comparing the Utility of Mitochondrial and Nuclear DNA to Adjust for Genetic Ancestry in Association Studies
Cited by: 17
Author(s): Brendan Miller, Thalida Em Arpawong, Henry Jiao, Su-Jeong Kim, Kelvin Yen, Hemal H. Mehta, Junxiang Wan, John Carpten, Pinchas Cohen
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-019-55344-y

West Asian sources of the Eurasian component in Ethiopians: a reassessment
Cited by: 13
Author(s): Ludovica Molinaro, Francesco Montinaro, Burak Yelmen, Davide Marnetto, Doron M. Behar, Toomas Kivisild, Luca Pagani
Software Mentions: 2
Published: over 6 years ago

10.3390/cells10020241

Spermatogonia Loss Correlates with LAMA 1 Expression in Human Prepubertal Testes Stored for Fertility Preservation
Cited by: 13
Author(s): Magdalena Kurek, Elisabet Åkesson, Masahito Yoshihara, Elizabeth Oliver, Yanhua Cui, Martin Becker, João Pedro Alves-Lopes, Ragnar Bjarnason, Patrik Romerius, Mikael Sundin, Ulrika Norén Nyström, Cecilia Langenskiöld, Hartmut Vogt, Lars Henningsohn, Cecilia Petersen, Olle Söder, Jingtao Guo, Rod T Mitchell, Kirsi Jahnukainen, Jan-Bernd Stukenborg
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-55843-y

Simultaneous detection and comprehensive analysis of HPV and microbiome status of a cervical liquid-based cytology sample using Nanopore MinION sequencing
Cited by: 18
Author(s): Lili Quan, Ruyi Dong, Wenjuan Yang, Lanyou Chen, Jidong Lang, Jia Liu, Yu Song, Shuiqing Ma, Jialiang Yang, Weiwei Wang, Bo Meng, Geng Tian
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-55778-4

Systematic Modification of Zingerone Reveals Structural Requirements for Attraction of Jarvis’s Fruit Fly
Cited by: 7
Author(s): Benjamin L. Hanssen, Soo J. Park, Jane E Royer, Joanne F. Jamie, Phillip W. Taylor, Ian M. Jamie
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-55648-z

Genome-wide analysis of fatty acid desaturase genes in rice (Oryza sativa L.)
Cited by: 22
Author(s): E Zhiguo, Chen Chen, Jinyu Yang, Hanhua Tong, Tingting Li, Lei Wang, Hongqi Chen
Software Mentions: 2
Published: over 6 years ago

10.3390/cells9061556

Circulating microRNA Signature Associated to Interstitial Lung Abnormalities in Respiratory Asymptomatic Subjects
Cited by: 12
Author(s): Blanca Ortíz-Quintero, Ivette Buendía-Roldán, Eric G. Ramírez‐Salazar, Yalbi I. Balderas-Martínez, Sandra Lizbeth Ramírez-Rodríguez, Karen Martínez-Espinosa, Moisés Selman
Software Mentions: 2
Published: about 6 years ago

10.3390/cells10092380

Mitochondrial Disruption by Amyloid Beta 42 Identified by Proteomics and Pathway Mapping
Cited by: 11
Author(s): Patricia Sinclair, Ancha Baranova, Nadine Kabbani
Software Mentions: 2
Published: almost 5 years ago

10.3390/cells10071701

Phosphorylation in the Charged Linker Modulates Interactions and Secretion of Hsp90β
Cited by: 5
Author(s): Lorenz Weidenauer, Manfredo Quadroni
Software Mentions: 2
Published: about 5 years ago

10.3390/cells10071838

Transcriptomic Hallmarks of Ischemia-Reperfusion Injury
Cited by: 9
Author(s): Mandana Movahed, Sydney Brockie, James Hong, Michael G. Fehlings
Software Mentions: 2
Published: about 5 years ago

10.2196/26646

Future Medical Artificial Intelligence Application Requirements and Expectations of Physicians in German University Hospitals: Web-Based Survey
Cited by: 35
Author(s): Oliver Maaßen, Sebastian Fritsch, Julia Palm, Saskia Deffge, J. Kunze, Gernot Marx, Morris Riedel, Andreas Schuppert, Johannes Bickenbach
Software Mentions: 2
Published: over 5 years ago

10.2196/jmir.6533

Supervised Machine Learning Algorithms Can Classify Open-Text Feedback of Doctor Performance With Human-Level Accuracy
Cited by: 41
Author(s): Chris Gibbons, Suzanne H Richards, José M Valderas, John Campbell
Software Mentions: 2
Published: over 9 years ago

10.1038/s41422-020-0354-1

Immunity-and-matrix-regulatory cells derived from human embryonic stem cells safely and effectively treat mouse lung injury and fibrosis
Cited by: 49
Author(s): Jun Wu, Dingyun Song, Zhongwen Li, Baojie Guo, Yani Xiao, Wenjing Liu, Liping Liang, Chunjing Feng, Tingting Gao, Yanxia Chen, Ying Li, Zai Wang, Jianyan Wen, Shengnan Yang, Peipei Li, Lei Wang, Yukai Wang, Liang Peng, Glyn Stacey, Zheng Hu, Guihai Feng, Wei Li, Yan Huo, Ronghua Jin, Ng Shyh‐Chang, Qi Zhou, Liu Wang, Baoyang Hu, Huaping Dai, Jie Hao
Software Mentions: 2
Published: about 6 years ago

10.1016/j.xcrm.2021.100276

Diverse immune response of DNA damage repair-deficient tumors
Cited by: 12
Author(s): Tao Qing, Tomi Jun, Katherine E. Lindblad, Amaia Lujambio, Michał Marczyk, Lajos Pusztai, Kuan‐lin Huang
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-68394-4

Analysis of tumor mutational burden: correlation of five large gene panels with whole exome sequencing
Cited by: 29
Author(s): Carina Heydt, Jan Rehker, Roberto Pappesch, Theresa Buhl, Markus Ball, Udo Siebolts, A Haak, Philipp Lohneis, Reinhard Büttner, Axel M. Hillmer, Sabine Merkelbach‐Bruse
Software Mentions: 2
Published: about 6 years ago

10.1016/j.celrep.2021.109716

Myosin-X and talin modulate integrin activity at filopodia tips
Cited by: 25
Author(s): Mitro Miihkinen, Max L.B. Grönloh, Aleksandra Popović, Helena Vihinen, Eija Jokitalo, Benjamin T. Goult, Johanna Ivaska, Guillaume Jacquemet
Software Mentions: 2
Published: almost 5 years ago

10.1016/j.celrep.2020.108274

An Alternative Binding Mode of IGHV3-53 Antibodies to the SARS-CoV-2 Receptor Binding Domain
Cited by: 139
Author(s): Nicholas C. Wu, Meng Yuan, Hejun Liu, Chang-Chun David Lee, Xueyong Zhu, Sandhya Bangaru, Jonathan L. Torres, Tom G. Caniels, Philip J.M. Brouwer, Marit J. van Gils, Rogier W. Sanders, Andrew B. Ward, Ian A. Wilson
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13619-021-00078-4

Forkhead box family transcription factors as versatile regulators for cellular reprogramming to pluripotency
Cited by: 7
Author(s): Meijun Fu, Huan Chen, Zepo Cai, Yihang Yang, Ziyu Feng, Meiqin Zeng, Lijun Chen, Yue Qin, Baomei Cai, Pinghui Zhu, Chunhua Zhou, Shengyong Yu, Jing Guo, Jing Liu, Shuiyan Cao, Duanqing Pei
Software Mentions: 2
Published: about 5 years ago

10.1111/cpr.13028

Immunosuppressive effect of mesenchymal stem cells on lung and gut CD8 + T cells in lipopolysaccharide‐induced acute lung injury in mice
Cited by: 24
Author(s): Yanping Xu, Jiaqi Zhu, Bing Feng, Feiyan Lin, Jiarong Zhou, Jingqi Liu, Xiaowei Shi, Xuan Li, Qiaoling Pan, Jiong Yu, Ying Zhang, Lanjuan Li, Hong Cao
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-68782-w

Recurrence of positive SARS-CoV-2 viral RNA in recovered COVID-19 patients during medical isolation observation
Cited by: 91
Author(s): Bo Yuan, Hanqing Liu, Zhengrong Yang, Yongxin Chen, Zhiyong Liu, Kai Zhang, Cheng Wang, Weixin Li, Yu An, Jian-Chun Wang, Shuo Song
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-68150-8

High expression of TCN1 is a negative prognostic biomarker and can predict neoadjuvant chemosensitivity of colon cancer
Cited by: 25
Author(s): Guangjie Liu, Yao-jie Wang, Meng Yue, Lianmei Zhao, Yongdong Guo, Yueping Liu, Hongjiang Yang, Fang Liu, Xue Zhang, Lianghui Zhi, Jing Zhao, Yan Sun, Guiying Wang
Software Mentions: 2
Published: about 6 years ago

10.1038/s41423-020-00599-z

Efficient IL-2R signaling differentially affects the stability, function, and composition of the regulatory T-cell pool
Cited by: 18
Author(s): Marc Permanyer, Berislav Bošnjak, Silke Glage, Michaela Friedrichsen, Stefan Floess, Jochen Huehn, Gwendolyn E. Patzer, Ivan Odak, Nadine Eckert, Razieh Zargari, Laura Ospina-Quintero, Hristo Georgiev, Reinhold Förster
Software Mentions: 2
Published: over 5 years ago

10.1264/jsme2.ME18108

Effects of the Wastewater Flow Rate on Interactions between the Genus Nitrosomonas and Diverse Populations in an Activated Sludge Microbiome
Cited by: 6
Author(s): Takashi Narihiro, Masaru K. Nobu, Tomoyuki Hori, Tomo Aoyagi, Yuya Sato, Tomohiro Inaba, Hitoshi Aizawa, Hideyuki Tamaki, Hiroshi Habe
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-020-69292-5

Carbon steel corrosion by bacteria from failed seal rings at an offshore facility
Cited by: 32
Author(s): Silvia J. Salgar-Chaparro, Adam Darwin, Anna H. Kaksonen, Laura L. Machuca
Software Mentions: 2
Published: about 6 years ago

10.2196/18234

A Rapid Electronic Cognitive Assessment Measure for Multiple Sclerosis: Validation of Cognitive Reaction, an Electronic Version of the Symbol Digit Modalities Test
Cited by: 7
Author(s): Rod Middleton, Owen Pearson, Gillian Ingram, Elaine Craig, Jeff Rodgers, Hannah Downing-Wood, Joseph Hill, Katie Tuite-Dalton, Christopher Roberts, Lynne Watson, David Ford, Richard Nicholas
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-69188-4

Sierra Nevada sweep: metagenomic measurements of bioaerosols vertically distributed across the troposphere
Cited by: 12
Author(s): Crystal Jaing, James B. Thissen, Michael D. Morrison, Michael Dillon, Samantha M. Waters, Garrett T. Graham, Nicholas A. Be, Patrick Nicoll, Sonali Verma, Tristan Caro, David J. Smith
Software Mentions: 2
Published: about 6 years ago

10.1016/j.chom.2018.04.017

Genomic Epidemiology Reconstructs the Introduction and Spread of Zika Virus in Central America and Mexico
Cited by: 80
Author(s): Julien Thézé, Tony Li, Louis du Plessis, Jérôme Bouquet, Moritz U. G. Kraemer, Sneha Somasekar, Guixia Yu, Mariateresa de Cesare, Ángel Balmaseda, Guillermina Kuan, Eva Harris, Chieh-Hsi Wu, Azim Ansari, Rory Bowden, Nuno Rodrigues Faria, Shigeo Yagi, Sharon Messenger, Trevor Brooks, Mars Stone, Evan M. Bloch, Michael P. Busch, José Esteban Muñoz-Medina, César González-Bonilla, Steven M. Wolinsky, Susana López, David Bonsall, Charles Y. Chiu, Oliver G. Pybus
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-020-69351-x

A negative covariation between toxoplasmosis and CoVID-19 with alternative interpretations
Cited by: 20
Author(s): Łukasz Jankowiak, Lajos Rózsa, Piotr Tryjanowski, Anders Pape Møller
Software Mentions: 2
Published: about 6 years ago

10.1038/s41421-018-0072-8

Targeting JNK pathway promotes human hematopoietic stem cell expansion
Cited by: 27
Author(s): Xiyuan Xiao, Weifeng Lai, Huangfan Xie, Yang Liu, Weijie Guo, Yifang Liu, Li Yu, Yuanjun Li, Jingliang Simon Zhang, Wenhan Chen, Minhui Shi, Shang Liu, Ming Yin, Chengyan Wang, Hongkui Deng
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-020-69127-3

Neuronal correlates of spider phobia in a combined fNIRS-EEG study
Cited by: 10
Author(s): David Rosenbaum, Elisabeth J. Leehr, Agnes Kroczek, Julian Rubel, Isabell Int-Veen, Kira Deutsch, Moritz J. Maier, Justin Hudak, Andreas J. Fallgatter, Ann‐Christine Ehlis
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0153631

The Complete Female- and Male-Transmitted Mitochondrial Genome of Meretrix lamarckii
Cited by: 36
Author(s): Stefano Bettinazzi, Federico Plazzi, Marco Passamonti
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0186901

Adaptation to dislodgement risk on wave-swept rocky shores in the snail Littorina saxatilis
Cited by: 32
Author(s): Guénolé Le Pennec, Roger K. Butlin, Per R. Jonsson, Ann I. Larsson, Jessica Lindborg, Erik Bergström, Anja M. Westram, Kerstin Johannesson
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0172132

Salient object changes influence overt attentional prioritization and object-based targeting in natural scenes
Cited by: 10
Author(s): Nicola Anderson, Mieke Donk
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0127455

Pyrosequencing Characterization of the Microbiota from Atlantic Intertidal Marine Sponges Reveals High Microbial Diversity and the Lack of Co-Occurrence Patterns
Cited by: 29
Author(s): Anoop Alex, Agostinho Antunes
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0234778

Photodepletion with 2-Se-Cl prevents lethal graft-versus-host disease while preserving antitumor immunity
Cited by: 1
Author(s): Jason M. Grayson, Mildred D. Perez, Rebecca Blevins, Benjamin N. Coe, Michael R. Detty, Zachariah A. McIver
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0208159

Physical therapists’ perspectives on using contextual factors in clinical practice: Findings from an Italian national survey
Cited by: 27
Author(s): Giacomo Rossettini, Alvisa Palese, Tommaso Geri, Mirta Fiorio, Luana Colloca, Marco Testa
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0203286

Transcriptomic insights on the virulence-controlling CsrA, BadR, RpoN, and RpoS regulatory networks in the Lyme disease spirochete
Cited by: 22
Author(s): William K. Arnold, Christina R. Savage, Kathryn G. Lethbridge, Trever C. Smith, Catherine A. Brissette, J. Seshu, Brian Stevenson
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-020-69495-w

Human pluripotent stem cell-derived cardiomyocytes as a target platform for paracrine protection by cardiac mesenchymal stromal cells
Cited by: 8
Author(s): Chrystalla Constantinou, António Miranda, Patrícia Chaves, Mohamed Bellahcene, Andrea Massaia, Kevin Cheng, Sara Samari, Stephen Rothery, Anita M. Chandler, Richard P. Schwarz, Siân E. Harding, Prakash P Punjabi, Michael Schneider, Michela Noseda
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0191853

Ezh2 does not mediate retinal ganglion cell homeostasis or their susceptibility to injury
Cited by: 10
Author(s): Lin Cheng, Lucy Wong, Naihong Yan, Richard C. Han, Honghua Yu, Chin-Lin Guo, Khulan Batsuuri, Aniket Zinzuwadia, Ryan Guan, Kin‐Sang Cho, Dong Feng Chen
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-020-70393-4

The proteomic analysis of breast cell line exosomes reveals disease patterns and potential biomarkers
Cited by: 69
Author(s): Yousef Risha, Zoran Minić, Shahrokh M. Ghobadloo, Maxim V. Berezovski
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-70443-x

Effect of cereal fermentation and carbohydrase supplementation on growth, nutrient digestibility and intestinal microbiota in liquid-fed grow-finishing pigs
Cited by: 14
Author(s): A. Torres-Pitarch, Gillian E. Gardiner, Paul Cormican, Mary C. Rea, Fiona Crispie, John V. O’Doherty, Pierre Cozannet, Tomás Ryan, James T. Cullen, Peadar G. Lawlor
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0226225

Spatial genetic structure and diversity of natural populations of Aesculus hippocastanum L. in Greece
Cited by: 9
Author(s): Łukasz Walas, Petros Ganatsas, Grzegorz Iszkuło, Peter A. Thomas, Monika Dering
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0209124

Reducing phenolic off-flavors through CRISPR-based gene editing of the FDC1 gene in Saccharomyces cerevisiae x Saccharomyces eubayanus hybrid lager beer yeasts
Cited by: 20
Author(s): Stijn F. L. Mertens, Brigida Gallone, Jan Steensels, Beatriz Herrera‐Malaver, Jeroen Cortebeek, Robbe Nolmans, Veerle Saels, Valmik K. Vyas
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-020-70769-6

Plasmid-based complementation of large deletions in Phaeodactylum tricornutum biosynthetic genes generated by Cas9 editing
Cited by: 14
Author(s): Samuel S. Slattery, Helen Wang, Daniel J. Giguere, Csanad Kocsis, Bradley L. Urquhart, Bogumil J. Karas, David R. Edgell
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-71023-9

A retrospective analysis of the dynamic transmission routes of the COVID-19 in mainland China
Cited by: 3
Author(s): Xiandeng Jiang, Le Chang, Yanlin Shi
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-71014-w

Metabolomics approach revealed robust changes in amino acid and biogenic amine signatures in patients with schizophrenia in the early course of the disease
Cited by: 32
Author(s): Madis Parksepp, Liisa Leppik, Kadri Koch, Kärt Uppin, Raul Kangro, Liina Haring, Eero Vasar, Mihkel Zilmer
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0248730

Variability in digestive and respiratory tract Ace2 expression is associated with the microbiome
Cited by: 26
Author(s): Sean T. Koester, Naisi Li, Daniel M. Lachance, Norma M. Morella, Neelendu Dey
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0109532

Burrows of the Semi-Terrestrial Crab Ucides cordatus Enhance CO2 Release in a North Brazilian Mangrove Forest
Cited by: 38
Author(s): Nathalie Pülmanns, Karen Diele, Ulf Mehlig, Inga Nordhaus
Software Mentions: 2
Published: almost 12 years ago

10.1038/s41598-020-71057-z

Females of the red damselfly Mnesarete pudica are attracted to more ornamented males and attract rival males
Cited by: 4
Author(s): Paloma Pena-Firme, Rhainer Guillermo Nascimento Ferreira
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0195771

High-resolution temporal and regional mapping of MAPT expression and splicing in human brain development
Cited by: 55
Author(s): Marco M. Hefti, Kurt Farrell, SoongHo Kim, Kathryn R. Bowles, Mary Fowkes, Towfique Raj, John F. Crary
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0253434

Hospital admission for type 2 diabetes mellitus under the Universal Coverage Scheme in Thailand: A time- and geographical-trend analysis, 2009–2016
Cited by: 7
Author(s): Tanapat Laowahutanon, Haruyo Nakamura, Hisateru Tachimori, Shuhei Nomura, Tippawan Liabsuetrakul, Apiradee Lim, Petch Rawdaree, Netnapis Suchonwanich, Hiroyuki Yamamoto, Aya Ishizuka, Kenji Shibuya, Hiroaki Matsubara, Virasakdi Chongsuvivatwong
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-71430-y

Differences between young and older adults in physiological and subjective responses to emotion induction using films
Cited by: 18
Author(s): Luz Fernández-Aguilar, José Miguel Latorre Postigo, Arturo Martínez-Rodrigo, José Moncho-Bogani, Laura Ros, Pablo Latorre, Jorge Javier Ricarte, Antonio Fernández-Caballero
Software Mentions: 2
Published: almost 6 years ago

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