cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1186/s12874-019-0660-9

The triple variable index combines information generated over time from common monitoring variables to identify patients expressing distinct patterns of intraoperative physiology
Cited by: 0
Author(s): Michael P. Schnetz, Harry Hochheiser, David Danks, Douglas Landsittel, Keith M. Vogt, James W. Ibinson, S Whitehurst, Sean McDermott, Melissa Giraldo Duque, A. Murat Kaynar
Software Mentions: 2
Published: over 7 years ago

10.1186/s12874-019-0829-2

BUGSnet: an R package to facilitate the conduct and reporting of Bayesian network Meta-analyses
Cited by: 115
Author(s): Audrey Béliveau, Devon J. Boyne, Justin Slater, Darren R. Brenner, Paul Arora
Software Mentions: 2
Published: over 6 years ago

10.1128/mSystems.00261-19

Age- and Sex-Dependent Patterns of Gut Microbial Diversity in Human Adults
Cited by: 193
Author(s): Jacobo de la Cuesta-Zuluaga, Scott T. Kelley, Yingfeng Chen, Juan S. Escobar, Noel T. Mueller, Ruth E. Ley, Daniel McDonald, Shi Huang, Austin D. Swafford, Rob Knight, Varykina G. Thackray
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12862-020-01705-5

The evolution of the huntingtin-associated protein 40 (HAP40) in conjunction with huntingtin
Cited by: 10
Author(s): Manuel Seefelder, Vikram Alva, Bin Huang, Tatjana Engler, Wolfgang Baumeister, Qiang Guo, Rubén Fernández-Busnadiego, Andrei N. Lupas, Stefan Kochanek
Software Mentions: 2
Published: over 5 years ago

10.1128/mSystems.00320-19

Uncovering the Diversity and Activity of Methylotrophic Methanogens in Freshwater Wetland Soils
Cited by: 26
Author(s): Adrienne B. Narrowe, Mikayla A. Borton, David Hoyt, Garrett J. Smith, Rebecca A. Daly, Jordan C. Angle, Elizabeth K. Eder, Allison R. Wong, Richard A. Wolfe, Alexandra Pappas, Gil Bohrer, Christopher S. Miller, Kelly Wrighton
Software Mentions: 2
Published: over 6 years ago

10.1128/mSystems.00905-19

Metagenome Mining Reveals Hidden Genomic Diversity of Pelagimyophages in Aquatic Environments
Cited by: 21
Author(s): Asier Zaragoza-Solas, Francisco Rodrı́guez-Valera, Mario López‐Pérez
Software Mentions: 2
Published: over 6 years ago

10.1128/mSystems.00768-19

Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil
Cited by: 43
Author(s): Lauren Alteio, Frederik Schulz, Rekha Seshadri, Neha Varghese, William G Rodríguez-Reillo, Elizabeth Ryan, Danielle Goudeau, Stephanie A. Eichorst, Rex R. Malmstrom, Robert M. Bowers, Laura A. Katz, Jeffrey L. Blanchard, Tanja Woyke
Software Mentions: 2
Published: about 6 years ago

10.1128/mSystems.00910-19

Sex Bias in Gut Microbiome Transmission in Newly Paired Marmosets (Callithrix jacchus)
Cited by: 24
Author(s): Lishan Zhu, Jonathan B. Clayton, Mallory J. Suhr Van Haute, Qinnan Yang, Haley Hassenstab, Aaryn C. Mustoe, Dan Knights, Andrew K. Benson, Jeffrey A. French
Software Mentions: 2
Published: about 6 years ago

10.1128/mSystems.00125-20

Comparative Genomics and Metabolomics in the Genus <i>Nocardia</i>
Cited by: 38
Author(s): Daniel Männle, Shaun M. K. McKinnie, Shrikant Mantri, Kat Steinke, Zeyin Lu, Bradley S. Moore, Nadine Ziemert, Leonard Kaysser
Software Mentions: 2
Published: almost 6 years ago

10.3390/ijerph16010054

Exploring Behavior of People with Suicidal Ideation in a Chinese Online Suicidal Community
Cited by: 11
Author(s): Zheng Wang, Guang Yu, Xianyun Tian
Software Mentions: 2
Published: over 7 years ago

10.3390/ijerph16030357

Combining Spatial Analysis and a Drinking Water Quality Index to Evaluate Monitoring Data
Cited by: 13
Author(s): Hongxing Li, Charlotte Smith, Li Wang, Li Zheng, Chuanlong Xiong, Rong Zhang
Software Mentions: 2
Published: over 7 years ago

10.3390/ijerph16193777

Anti-Biofouling Performance of an Immobilized Indigenous Quorum Quenching Bacterium Bacillus cereus HG10 and Its Influence on the Microbial Community in a Bioreactor
Cited by: 6
Author(s): Fangfang Xu, Chang Zhao, Chuang Hak Lee, Wenzhao Wang, Qiyong Xu
Software Mentions: 2
Published: over 6 years ago

10.3390/nu13041141

Adherence to a Supplemented Mediterranean Diet Drives Changes in the Gut Microbiota of HIV-1-Infected Individuals
Cited by: 11
Author(s): Roque Pastor-Ibáñez, Juan Blanco-Heredia, Florencia Etcheverry, Sonsoles Sánchez-Palomino, Francisco Díez-Fuertes, Rosa Casas, María A Navarrete-Muñoz, Sara Castro‐Barquero, Claudia Lucero, Irene Fernández, Lorna Leal, José María Sánchez Benito, Marc Noguera-Julián, Roger Paredes, Norma Rallón, Ramón Estruch, David Torrents, Felipe García
Software Mentions: 2
Published: about 5 years ago

10.3390/ijerph17041174

Changes in Microbial Community Structures under Reclaimed Water Replenishment Conditions
Cited by: 6
Author(s): Jie Li, Yujiao Sun, Xiaoyu Wang, Shangwei Xu
Software Mentions: 2
Published: over 6 years ago

10.3390/ijerph17062158

Characterisation of Microbial Community Associated with Different Disinfection Treatments in Hospital hot Water Networks
Cited by: 12
Author(s): Stefania Paduano, Isabella Marchesi, Maria Elisabetta Casali, Federica Valeriani, Giuseppina Frezza, Elena De Vecchi, Luca Sircana, Vincenzo Romano Spica, Paola Borella, Annalisa Bargellini
Software Mentions: 2
Published: about 6 years ago

10.1186/s12920-016-0172-y

Saliva DNA quality and genotyping efficiency in a predominantly elderly population
Cited by: 23
Author(s): Harini V. Gudiseva, Mark Hansen, Linda S. Gutierrez, David W. Collins, Jie He, Lana D. Verkuil, Ian Danford, Anna Sagaser, Anita S. Bowman, Rebecca Salowe, Prithvi S. Sankar, Eydie Miller-Ellis, Amanda Lehman, Joan M. O’Brien
Software Mentions: 2
Published: about 10 years ago

10.3390/nu11050972

Effect of Protein-Fortified Diet on Nitrogen Balance in Critically Ill Patients: Results from the OPINiB Trial
Cited by: 11
Author(s): Matteo Danielis, Giulia Lorenzoni, Danila Azzolina, Anna Iacobucci, Omar Trombini, Amato De Monte, Darío Gregori, Fabio Beltrame
Software Mentions: 2
Published: about 7 years ago

10.1186/1755-8794-8-S2-S5

Relating hepatocellular carcinoma tumor samples and cell lines using gene expression data in translational research
Cited by: 56
Author(s): Bin Chen, Marina Sirota, Hua Fan-Minogue, Dexter Hadley, Atul J. Butte
Software Mentions: 2
Published: about 11 years ago

10.3390/ijerph17207590

Impact of Non-Tailored One-Way Automated Short Messaging Service (OASMS) on Glycemic Control in Type 2 Diabetes: A Retrospective Feasibility Study
Cited by: 2
Author(s): Ahmad Alamer, C. E. Palm, Abdulaziz Almulhim, Charisse Te, Merri Pendergrass, Maryam Fazel
Software Mentions: 2
Published: over 5 years ago

10.3390/ijerph17217817

The Development of a Public Bathroom Perception Scale
Cited by: 8
Author(s): Guido Corradi, Eduardo García-Garzón, Juan Ramón Barrada
Software Mentions: 2
Published: over 5 years ago

10.3390/ijerph17228386

Machine Learning for Mortality Analysis in Patients with COVID-19
Cited by: 31
Author(s): Manuel Sánchez-Montañés, Pablo Rodríguez-Belenguer, Antonio J. Serrano-López, Emilio Soria-Olivas, Yasser Alakhdar-Mohmara
Software Mentions: 2
Published: over 5 years ago

10.1186/s12920-020-00834-6

Identification of LINC02310 as an enhancer in lung adenocarcinoma and investigation of its regulatory network via comprehensive analyses
Cited by: 4
Author(s): Wenyuan Zhao, Jun Wang, Qingxi Luo, Wei Peng, Bin Li, Lei Wang, Chunfang Zhang, Chaojun Duan
Software Mentions: 2
Published: over 5 years ago

10.3390/ijerph18020805

Effects of Untreated Drinking Water at Three Indigenous Yaqui Towns in Mexico: Insights from a Murine Model
Cited by: 5
Author(s): Sofía Navarro-Espinoza, Aracely Angulo‐Molina, Guillermo López-Cervantes, María Mercedes Meza-Montenegro, Aurora Armienta, Diego Soto‐Puebla, Erika Silva‐Campa, Alexel Burgara-Estrella, O. Álvarez‐Bajo, M. Pedroza‐Montero
Software Mentions: 2
Published: over 5 years ago

10.3390/ijerph18041910

Protective Elements of Mental Health Status during the COVID-19 Outbreak in the Portuguese Population
Cited by: 79
Author(s): Pedro Silva Moreira, Sónia Ferreira, Beatriz Couto, Mafalda Machado-Sousa, M. E. Fernandez, Catarina Raposo-Lima, Nuno Sousa, Maria Picó-Pérez, Pedro Morgado
Software Mentions: 2
Published: over 5 years ago

10.1186/s12920-015-0099-8

Gestational tissue transcriptomics in term and preterm human pregnancies: a systematic review and meta-analysis
Cited by: 57
Author(s): Haley R. Eidem, William E. Ackerman, Kriston L. McGary, Patrick Abbot, Antonis Rokas
Software Mentions: 2
Published: about 11 years ago

10.3390/ijerph18094486

Climate Change and Mental Health: A Scoping Review
Cited by: 102
Author(s): Fiona J Charlson, Suhailah Ali, Tarik Benmarhnia, Madeleine Pearl, Alessandro Massazza, Jura Augustinavicius, James G. Scott
Software Mentions: 2
Published: about 5 years ago

10.3390/ijerph18094893

Listen to Your Heart–Ecological Momentary Assessment of Interoceptive Accuracy, Awareness and Sensibility: A Pilot Study
Cited by: 5
Author(s): Inken Höller, Jana-Sophie Stenzel, Dajana Rath, Thomas Forkmann
Software Mentions: 2
Published: about 5 years ago

10.3390/ijerph18136954

Toilet Paper, Minced Meat and Diabetes Medicines: Australian Panic Buying Induced by COVID-19
Cited by: 13
Author(s): Teyl Engstrom, Dolly Baliunas, Benjamin Sly, Anthony Russell, Peter Donovan, Heike K. Krausse, Clair Sullivan, Jason D. Pole
Software Mentions: 2
Published: almost 5 years ago

10.3390/ijerph18158048

Characterisation of Environmental Biofilms Colonising Wall Paintings of the Fornelle Cave in the Archaeological Site of Cales
Cited by: 8
Author(s): Danièle De Luca, Paolo Caputo, Teresa Perfetto, Paola Cennamo
Software Mentions: 2
Published: almost 5 years ago

10.3390/ijerph18168254

Soy and Frequent Dairy Consumption with Subsequent Equol Production Reveals Decreased Gut Health in a Cohort of Healthy Puerto Rican Women
Cited by: 3
Author(s): Mercedes Lacourt-Ventura, Brayan Vilanova-Cuevas, Delmarie Rivera-Rodríguez, Raysa Rosario-Acevedo, Christine Miranda, Gerónimo Maldonado-Martínez, Johanna Maysonet, Darlene Vargas, Yelitza Ruiz, Robert Hunter-Mellado, Luis A. Cubano, Suranganie Dharmawardhane, Johanna W. Lampe, Abel Baerga‐Ortiz, Filipa Godoy-Vitorino, Michelle M. Martínez-Montemayor
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12881-015-0254-2

Expression analysis of the osteoarthritis genetic susceptibility locus mapping to an intron of the MCF2L gene and marked by the polymorphism rs11842874
Cited by: 18
Author(s): Colin Shepherd, Andrew Skelton, Michael D. Rushton, Louise N. Reynard, John Loughlin
Software Mentions: 2
Published: over 10 years ago

10.2196/17767

Efficacy of the Digital Therapeutic Mobile App BioBase to Reduce Stress and Improve Mental Well-Being Among University Students: Randomized Controlled Trial
Cited by: 45
Author(s): Sonia Ponzo, Davide Morelli, Jamie M. Kawadler, Nicola Rose Hemmings, Geoffrey Bird, David Plans
Software Mentions: 2
Published: about 6 years ago

10.2196/24194

Measurement of Human Walking Movements by Using a Mobile Health App: Motion Sensor Data Analysis
Cited by: 3
Author(s): Sungchul Lee, Ryan M Walker, Yoohwan Kim, Hyunhwa Lee
Software Mentions: 2
Published: over 5 years ago

10.1093/jncics/pkab037

Two-Sample Mendelian Randomization Analysis of Associations Between Periodontal Disease and Risk of Cancer
Cited by: 7
Author(s): Laura Corlin, Mengyuan Ruan, Konstantinos K. Tsilidis, Emmanouil Bouras, Yau-Hua Yu, Rachael Z. Stolzenberg‐Solomon, Alison P. Klein, Harvey A. Risch, Christopher I. Amos, Lori C. Sakoda, Pavel Vodička, Pai K Rish, James D. Beck, Elizabeth A. Platz, Dominique S. Michaud
Software Mentions: 2
Published: about 5 years ago

10.1186/s40425-018-0327-9

Radiation and PD-(L)1 treatment combinations: immune response and dose optimization via a predictive systems model
Cited by: 77
Author(s): Yuri Kosinsky, Simon J. Dovedi, Kirill Peskov, Veronika Voronova, Lulu Chu, Helen Tomkinson, Nidal Al‐Huniti, Donald R. Stanski, Gabriel Helmlinger
Software Mentions: 2
Published: over 8 years ago

10.1186/s12909-020-02317-9

How and why do French medical students choose the specialty of infectious and tropical diseases? A national cross-sectional study
Cited by: 8
Author(s): Nathan Peiffer-Smadja, François-Daniel Ardellier, P. Thill, Anne-Lise Beaumont, Gaud Catho, Lindsay Osei, Vincent Dubée, Alexandre Bleibtreu, Adrien Lemaignen, Michaël Thy
Software Mentions: 2
Published: over 5 years ago

10.1186/s12909-021-02896-1

Online teaching in physiotherapy education during COVID-19 pandemic in Italy: a retrospective case-control study on students’ satisfaction and performance
Cited by: 35
Author(s): Giacomo Rossettini, Tommaso Geri, Andrea Turolla, Antonello Viceconti, Cristina Scumà, Mattia Mirandola, Andrea Dell’Isola, Silvia Gianola, Filippo Maselli, Alvisa Palese
Software Mentions: 2
Published: almost 5 years ago

10.1007/s10295-019-02165-7

Towards sustainable bioplastic production using the photoautotrophic bacterium <i>Rhodopseudomonas palustris</i> TIE-1
Cited by: 62
Author(s): Tahina Onina Ranaivoarisoa, Rajesh Singh, R. Karthikeyan, Michael S. Guzman, Arpita Bose
Software Mentions: 2
Published: over 6 years ago

10.1093/infdis/jiab147

Human Rhinovirus Infection Blocks Severe Acute Respiratory Syndrome Coronavirus 2 Replication Within the Respiratory Epithelium: Implications for COVID-19 Epidemiology
Cited by: 105
Author(s): Kieran Dee, Daniel Goldfarb, Joanne Haney, Julien A R Amat, Vanessa Herder, Meredith Stewart, Agnieszka M. Szemiel, Marc Baguelin, Pablo R. Murcia
Software Mentions: 2
Published: about 5 years ago

10.1093/infdis/jiy747

High-Resolution Evolutionary Analysis of Within-Host Hepatitis C Virus Infection
Cited by: 9
Author(s): Jayna Raghwani, Chieh-Hsi Wu, Cynthia K. Y. Ho, Menno D. de Jong, Richard Molenkamp, Janke Schinkel, Oliver G. Pybus, Katrina A. Lythgoe
Software Mentions: 2
Published: over 7 years ago

10.1007/s10545-017-0114-7

Plasma lipidomics as a diagnostic tool for peroxisomal disorders
Cited by: 19
Author(s): Katharina Herzog, Mia L. Pras‐Raves, Sacha Ferdinandusse, Martin A. T. Vervaart, Angela C. M. Luyf, Antoine H. C. van Kampen, Ronald J. A. Wanders, Hans R. Waterham, Frédéric M. Vaz
Software Mentions: 2
Published: over 8 years ago

10.1186/s12916-021-02116-z

Activated gut-homing CD8+ T cells for coeliac disease diagnosis on a gluten-free diet
Cited by: 3
Author(s): Fernando Fernández‐Bañares, Natalia López-Palacios, María Corzo, Beatriz Arau, Mercedes Rubio, Marta Fernández-Prieto, Eva Tristán, Mar Pujals, Sergio Farrais, Saúl Horta, J. Hernández, Marta Gómez-Perosanz, Pedro A. Reche, María Esteve, Concepción Núñez
Software Mentions: 2
Published: over 4 years ago

10.1007/s00442-021-04957-0

Plant and soil nitrogen in oligotrophic boreal forest habitats with varying moss depths: does exclusion of large grazers matter?
Cited by: 3
Author(s): Maria Väisänen, Maria Tuomi, Hannah Bailey, Jeffrey M. Welker
Software Mentions: 2
Published: about 5 years ago

10.1038/onc.2017.176

A DNA methylation map of human cancer at single base-pair resolution
Cited by: 71
Author(s): Enrique Vidal, Sergi Sayols, Sebastian Morán, Amy Guillaumet-Adkins, M. Schroêder, Romina Royo, Modesto Orozco, Marta Gut, Núria López‐Bigas, Holger Heyn, Manel Esteller
Software Mentions: 2
Published: about 9 years ago

10.1186/s12916-020-01745-0

Non-malarial febrile illness: a systematic review of published aetiological studies and case reports from Southern Asia and South-eastern Asia, 1980–2015
Cited by: 26
Author(s): Poojan Shrestha, Prabin Dahal, Chinwe Ogbonnaa-Njoku, Debashish Das, Kasia Stepniewska, Nigel V. Thomas, Heidi Hopkins, John A. Crump, David Bell, Paul N. Newton, Elizabeth A. Ashley, Philippe J Guérin
Software Mentions: 2
Published: over 5 years ago

10.1186/s12916-020-01571-4

The Analysis of Teaching of Medical Schools (AToMS) survey: an analysis of 47,258 timetabled teaching events in 25 UK medical schools relating to timing, duration, teaching formats, teaching content, and problem-based learning
Cited by: 24
Author(s): Oliver Devine, Andrew Christopher Harborne, Hugo Layard Horsfall, Tobin Joseph, Tess Marshall-Andon, Ryan Samuels, Joshua William Kearsley, Nadine Abbas, Hassan Baig, Joseph Beecham, Natasha Benons, Charlie Caird, Ryan Clark, Thomas Cope, James Coultas, Luke Debenham, Sarah Douglas, Jack Eldridge, Thomas Hughes-Gooding, Agnieszka Jakubowska, Oliver Jones, Eve Lancaster, Calum MacMillan, Ross McAllister, Wassim Merzougui, Ben Phillips, Simon E. V. Phillips, Omar Risk, A. H. Sage, Aisha Sooltangos, Robert Spencer, Roxanne Tajbakhsh, Oluseyi Adesalu, Ivan Aganin, Ammar Ahmed, Katherine Aiken, Alimatu-Sadia Akeredolu, Ibrahim Alam, Aamna Ali, Richard I. Anderson, Jia Jun Ang, Fady S Anis, Sonam Aojula, Catherine Arthur, Alena Ashby, Ahmed Ashraf, Emma Aspinall, Mark M. Awad, Abdul-Muiz Azri Yahaya, Shreya Badhrinarayanan, Soham Bandyopadhyay, Sam Barnes, Daisy Bassey-Duke, Charlotte Boreham, Rebecca Braine, Joseph Brandreth, Zoe Carrington, Zoe Cashin, Shaunak Chatterjee, Mehar Chawla, Chung Shen Chean, Chris Clements, Richard Clough, Jessica Coulthurst, Liam Curry, Vinnie Christine Daniels, Simon Davies, Rebecca Davis, Hanelie De Waal, Nasreen Desai, Hannah Douglas, James Druce, Lady-Namera Ejamike, Meron Esere, Alex Eyre, Ibrahim T. Fazmin, Sophia Fitzgerald‐Smith, Verity J. Ford, Sarah Freeston, Katherine Garnett, Whitney General, Helen Gilbert, Zein Gowie, Ciaran Grafton-Clarke, Keshni Gudka, Leher Gumber, Rishi Gupta, Chris Harlow, Amy Harrington, Adele Heaney, Wing Hang Serene Ho, Lucy Holloway, Christina Hood, Eleanor Houghton, Saba Houshangi, Emma Howard, Benjamin Human, Harriet Hunter, Ifrah Hussain, Sami Hussain, Richard Thomas Jackson-Taylor, Bronwen Jacob-Ramsdale, Ryan Janjuha, Saleh Jawad, Muzzamil Jelani, David Johnston, Mike Jones, Sadhana Kalidindi, Savraj Kalsi, Asanish Kalyanasundaram, Anna Kane, Sahaj Kaur, Othman Khaled Al-Othman, Qaisar Khan, Sajan Khullar, Priscilla Kirkland, Hannah Lawrence-Smith, Charlotte Leeson, Julius Elisabeth Richard Lenaerts, Kerry Long, Simon Lubbock, Jamie Mac Donald Burrell, Rachel Maguire, Praveen Mahendran, Saad Majeed, Prabhjot Singh Malhotra, Vinay Mandagere, Angelos Mantelakis, Sophie McGovern, Anjola Mosuro, Adam Moxley, Sophie Mustoe, Sam Myers, Kiran Nadeem, Reza Nasseri, Tom Newman, Richard Nzewi, Rosalie Ogborne, Joyce Omatseye, Sophie Paddock, James Parkin, Mohit Patel, Sohini Pawar, Stuart Pearce, Samuel Penrice, Julian Purdy, Raisa Ramjan, Ratan Randhawa, Usman Rasul, Elliot Raymond-Taggert, Rebecca Razey, Carmel Razzaghi, Eimear Reel, Elliot John Revell, Joanna Rigbye, Oloruntobi Rotimi, Abdelrahman Said, Emma Sanders, P Sangal, Nora Sangvik Grandal, Aadam Shah, Rahul Shah, Oliver Shotton, Daniel B. Sims, Katie Smart, Martha Amy Smith, Nick L. Smith, Aninditya Salma Sopian, Matthew South, Jessica Speller, Tom Syer, Ngan Hong Ta, Daniel Tadross, Benjamin Thompson, Jess Trevett, Matthew Tyler, Roshan Ullah, Mrudula Utukuri, Shree Vadera, Harriet Van Den Tooren, Sara Venturini, A.N. Vijayakumar, Melanie Vine, Zoe Wellbelove, Liora Wittner, Geoffrey Hong Kiat Yong, Farris Ziyada, I. C. McManus
Software Mentions: 2
Published: about 6 years ago

10.1038/s41389-018-0093-z

Development and evaluation of a novel series of Nitroxoline-derived BET inhibitors with antitumor activity in renal cell carcinoma
Cited by: 8
Author(s): Wei Chen, Hao Zhang, Zhifeng Chen, Hao Jiang, Liping Liao, Shijie Fan, Jing Xing, Yiqian Xie, Shijie Chen, Hong Ding, Kaixian Chen, Hualiang Jiang, Cheng Luo, Mingyue Zheng, Zhiyi Yao, Yiran Huang, Yuanyuan Zhang
Software Mentions: 2
Published: over 7 years ago

10.1194/jlr.M088930

Use of plasma metabolomics to analyze phenotype-genotype relationships in young hypercholesterolemic females
Cited by: 1
Author(s): Xiang Zhang, Antoine Rimbert, Willem Balder, Aeilko H. Zwinderman, Jan Albert Kuivenhoven, Geesje M. Dallinga‐Thie, Albert K. Groen
Software Mentions: 2
Published: over 7 years ago

10.1007/s10911-020-09472-1

Morphological Analysis of Human Milk Membrane Enclosed Structures Reveals Diverse Cells and Cell-like Milk Fat Globules
Cited by: 5
Author(s): Isabel Schultz-Pernice, Lisa K Engelbrecht, Stefania Petricca, Christina Scheel, Alecia-Jane Twigger
Software Mentions: 2
Published: over 5 years ago

10.1021/acs.jmedchem.0c02107

Folic Acid–Peptide Conjugates Combine Selective Cancer Cell Internalization with Thymidylate Synthase Dimer Interface Targeting
Cited by: 12
Author(s): Gaetano Marverti, María Luisa Dalla Chiara, Andrea Martello, Domenico D’Arca, Salvatore Pacifico, Renzo Guerrini, Francesca Spyrakis, Gaia Gozzi, Angela Lauriola, Matteo Santucci, Giuseppe Cannazza, Lorenzo Tagliazucchi, Addolorata Stefania Cazzato, Lorena Losi, Stefania Ferrari, Glauco Ponterini, Maria Paola Costi
Software Mentions: 2
Published: over 5 years ago

10.1016/j.jmb.2019.12.029

Diverse Antibody Responses to Conserved Structural Motifs in Plasmodium falciparum Circumsporozoite Protein
Cited by: 24
Author(s): Tossapol Pholcharee, David Oyen, Jonathan L. Torres, Yevel Flores-García, Martin Gm, González-Páez Ge, Daniel Emerling, Wayne Volkmuth, Emily Locke, King Cr, Fidel Zavala, A.B. Ward, Wilson Ia
Software Mentions: 2
Published: over 6 years ago

10.7554/eLife.61630

Loss of FLCN-FNIP1/2 induces a non-canonical interferon response in human renal tubular epithelial cells
Cited by: 11
Author(s): Iris E. Glykofridis, Jaco C. Knol, Jesper A. Balk, Denise Westland, Thang V. Pham, Sander R. Piersma, Sinéad M. Lougheed, Sepide Derakhshan, Puck Veen, Martin A. Rooimans, Saskia E. van Mil, Franziska Böttger, Pino J. Poddighe, Irma van de Beek, Jarno Drost, Fried Zwartkruis, Renée X. de Menezes, Hanne Meijers-Heijboer, Arjan C. Houweling, Connie R. Jiménez, Rob M. F. Wolthuis
Software Mentions: 2
Published: over 5 years ago

10.1186/s12916-021-01916-7

Implications of the ACC/AHA risk score for prediction of heart failure: the Rotterdam Study
Cited by: 6
Author(s): Banafsheh Arshi, J Berge, Bart van Dijk, Jaap W. Deckers, M. Arfan Ikram, Maryam Kavousi
Software Mentions: 2
Published: over 5 years ago

10.7554/eLife.56922

Differentiating Drosophila female germ cells initiate Polycomb silencing by regulating PRC2-interacting proteins
Cited by: 18
Author(s): Steven Z DeLuca, Megha Ghildiyal, Liang-Yu Pang, Allan C. Spradling
Software Mentions: 2
Published: almost 6 years ago

10.7554/eLife.28507

The AAA protein Msp1 mediates clearance of excess tail-anchored proteins from the peroxisomal membrane
Cited by: 65
Author(s): N. Weir, Roarke A. Kamber, James S Martenson, Vladimir Denic
Software Mentions: 2
Published: almost 9 years ago

10.7554/eLife.40811

Overriding FUS autoregulation in mice triggers gain-of-toxic dysfunctions in RNA metabolism and autophagy-lysosome axis
Cited by: 60
Author(s): Shuo-Chien Ling, Somasish Ghosh Dastidar, Seiya Tokunaga, Wan Yun Ho, Kenneth Teck Kiat Lim, Hristelina Ilieva, Philippe A. Parone, Sheue Houy Tyan, Tsemay M. Tse, Jer Cherng Chang, Oleksandr Platoshyn, Ngoc B. Bui, Anh Bui, Anne P. Vetto, Shuying Sun, Melissa McAlonis-Downes, Joo Seok Han, Debbie Swing, Katannya Kapeli, G Yeo, Lino Tessarollo, Martin Mars̆ala, Christopher E. Shaw, Greg Tucker‐Kellogg, Albert R. La Spada, Clotilde Lagier‐Tourenne, Sandrine Da Cruz, Don W. Cleveland
Software Mentions: 2
Published: over 7 years ago

10.7554/eLife.27445

Regulation of sleep homeostasis by sexual arousal
Cited by: 66
Author(s): Esteban J. Beckwith, Quentin Geissmann, Alice S. French, Giorgio F. Gilestro
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12879-015-1063-0

Analysis of cerebrospinal fluid protein concentrations of patients with cryptococcal meningitis treated with antifungal agents
Cited by: 6
Author(s): Lien‐Hung Huang, Hui Yang, Junyan Qu, Yanbin Liu, Chengliang Zhong, Guangmin Tang, Ying Liu, Yao Huang, Xiaoju Lv
Software Mentions: 2
Published: almost 11 years ago

10.7554/eLife.25293

Major satellite repeat RNA stabilize heterochromatin retention of Suv39h enzymes by RNA-nucleosome association and RNA:DNA hybrid formation
Cited by: 118
Author(s): Oscar Velázquez Camacho, Carmen Galán, Kalina Swist-Rosowska, Reagan W. Ching, Michael Gamalinda, Fethullah Karabiber, Inti A. De La Rosa-Velázquez, Bettina Engist, Birgit Koschorz, Nicholas Shukeir, Megumi Onishi-Seebacher, Suzanne van de Nobelen, Thomas Jenuwein
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12879-020-05417-5

The prediction for development of COVID-19 in global major epidemic areas through empirical trends in China by utilizing state transition matrix model
Cited by: 12
Author(s): Zheng Zhong, Ke Wu, Zhixian Yao, Xinyi Zheng, Junhua Zheng, Jian Chen
Software Mentions: 2
Published: over 5 years ago

10.1186/s12864-020-07025-8

Leishmania infection induces a limited differential gene expression in the sand fly midgut
Cited by: 11
Author(s): Iliano V. Coutinho-Abreu, Tiago D. Serafim, Claudio Meneses, Shaden Kamhawi, Fabiano Oliveira, Jesús G. Valenzuela
Software Mentions: 2
Published: almost 6 years ago

10.7554/eLife.42262

Multiple decay events target HAC1 mRNA during splicing to regulate the unfolded protein response
Cited by: 20
Author(s): Patrick D. Cherry, Sally E. Peach, Jay R. Hesselberth
Software Mentions: 2
Published: over 7 years ago

10.7554/eLife.18156

Migratory and adhesive cues controlling innate-like lymphocyte surveillance of the pathogen-exposed surface of the lymph node
Cited by: 62
Author(s): Yang Zhang, Theodore L. Roth, Elizabeth Gray, Hsin Chen, Lauren B. Rodda, Lei Yin, Patrick Ventura, Saul Villeda, Paul R. Crocker, Jason G. Cyster
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12864-016-2980-z

Comprehensive repeatome annotation reveals strong potential impact of repetitive elements on tomato ripening
Cited by: 27
Author(s): Ophélie Jouffroy, Surya Saha, Lukas A. Mueller, Hadi Quesneville, Florian Maumus
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12864-018-5014-1

The genome of the biting midge Culicoides sonorensis and gene expression analyses of vector competence for bluetongue virus
Cited by: 20
Author(s): Ramiro Morales‐Hojas, Malcolm Hinsley, Irina M. Armean, Rachel Silk, Lara E. Harrup, Asier Gonzalez-Uriarte, Eva Veronesi, Lahcen I. Campbell, Dana Nayduch, Christopher Saski, Walter J. Tabachnick, Paul J. Kersey, Simon Carpenter, Mark Fife
Software Mentions: 2
Published: almost 8 years ago

10.7554/eLife.38278

The lost world of Cuatro Ciénegas Basin, a relictual bacterial niche in a desert oasis
Cited by: 39
Author(s): Valeria Souza, Alejandra Moreno‐Letelier, Michael Travisano, Luis David Alcaraz, Gabriela Olmedo, Luis E. Eguiarte
Software Mentions: 2
Published: over 7 years ago

10.7554/eLife.29144

A minimally sufficient model for rib proximal-distal patterning based on genetic analysis and agent-based simulations
Cited by: 6
Author(s): Jennifer L. Fogel, Daniel L. Lakeland, In Kyoung Mah, Francesca V. Mariani
Software Mentions: 2
Published: over 8 years ago

10.1186/s12864-021-07431-6

Assessment of heterosis based on parental genetic distance estimated with SSR and SNP markers in upland cotton (Gossypium hirsutum L.)
Cited by: 16
Author(s): Xianguo Geng, Yujie Qu, Yulin Jia, Shoupu He, Zhaoe Pan, Liru Wang, Xinying Du
Software Mentions: 2
Published: over 5 years ago

10.1186/s12864-019-5750-x

Waking the sleeping dragon: gene expression profiling reveals adaptive strategies of the hibernating reptile Pogona vitticeps
Cited by: 14
Author(s): Alexander Capraro, Denis O’Meally, Shafagh A. Waters, Hardip R. Patel, Arthur Georges, Paul D. Waters
Software Mentions: 2
Published: about 7 years ago

10.1186/s12864-015-1691-1

Genome-wide characterization of intergenic polyadenylation sites redefines gene spaces in Arabidopsis thaliana
Cited by: 15
Author(s): Xiaohui Wu, Yong Zeng, Jinting Guan, Guoli Ji, Rongting Huang, Qingshun Quinn Li
Software Mentions: 2
Published: almost 11 years ago

10.7554/eLife.55619

The effect of climate change on yellow fever disease burden in Africa
Cited by: 26
Author(s): Katy A. M. Gaythorpe, Arran Hamlet, Laurence Cibrelus, Tini Garske, Neil Ferguson
Software Mentions: 2
Published: almost 6 years ago

10.3390/nu11081855

Longitudinal Changes of Mineral Concentrations in Preterm and Term Human Milk from Lactating Swiss Women
Cited by: 29
Author(s): Magalie Sabatier, Clara L. García-Ródenas, Carlos Antonio De Castro, Peter Kastenmayer, M Vigo, Stéphane Dubascoux, Daniel Andrey, Marine Nicolas, Janique Richoz Payot, Valentine Bordier, Sagar K. Thakkar, Lydie Beauport, Jean-François Tolsa, Céline J. Fischer Fumeaux, Michael Affolter
Software Mentions: 2
Published: almost 7 years ago

10.3390/nu13051692

Efficacy of Bilberry and Grape Seed Extract Supplement Interventions to Improve Glucose and Cholesterol Metabolism and Blood Pressure in Different Populations—A Systematic Review of the Literature
Cited by: 13
Author(s): Teresa Grohmann, Caroline Litts, Graham Horgan, Xuguang Zhang, Nigel Hoggard, Wendy R. Russell, Baukje de Roos
Software Mentions: 2
Published: about 5 years ago

10.7554/eLife.38497

A liquid-like organelle at the root of motile ciliopathy
Cited by: 50
Author(s): Ryan L. Huizar, Chanjae Lee, Alexander A. Boulgakov, Amjad Horani, Fan Tu, Edward M. Marcotte, Steven L. Brody, John B. Wallingford
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0207884

Preeclampsia and academic performance in children: A nationwide study from Iceland
Cited by: 24
Author(s): Friðgeir Andri Sverrisson, Brian T. Bateman, Thor Aspelund, Sigurgrímur Skúlason, Helga Zoëga
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0239998

Distinctiveness of genes contributing to growth of Pseudomonas syringae in diverse host plant species
Cited by: 10
Author(s): Tyler C. Helmann, Adam M. Deutschbauer, Steven E. Lindow
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0222503

Genetic diversity and population structure of four Chinese rabbit breeds
Cited by: 13
Author(s): Anyong Ren, Kun Du, Xianbo Jia, Rui Yang, Jie Wang, Shiyi Chen, Songjia Lai
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0224252

Behavioral predictors of subsequent respiratory illness signs in dogs admitted to an animal shelter
Cited by: 5
Author(s): Alexandra Protopopova, Nathaniel J. Hall, Kelsea M. Brown, Allison Andrukonis, Jessica P. Hekman
Software Mentions: 2
Published: over 6 years ago

10.7554/eLife.53560

A big-data approach to understanding metabolic rate and response to obesity in laboratory mice
Cited by: 48
Author(s): June K Corrigan, Deepti Ramachandran, Yuchen He, Colin N.A. Palmer, Michael J. Jurczak, Rui Chen, Bingshan Li, Randall H. Friedline, Jason K. Kim, Jon J. Ramsey, Louise Lantier, Owen P. McGuinness, Alexander S. Banks
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0186290

Dynamic microbial populations along the Cuyahoga River
Cited by: 11
Author(s): Matthew Cannon, Joseph M. Craine, James Hester, Amanda Shalkhauser, E. Ricky Chan, Kyle Logue, Scott T. Small, David Serre
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0148465

Transcriptomics Modeling of the Late-Gestation Fetal Pituitary Response to Transient Hypoxia
Cited by: 6
Author(s): Charles E. Wood, Eileen I. Chang, Elaine M. Richards, María Belén Rabaglino, Maureen Keller‐Wood
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0244489

Consistent patterns in 16S and 18S microbial diversity from the shells of the common and widespread red-eared slider turtle (Trachemys scripta)
Cited by: 3
Author(s): Matthew Parks, Cameron Kedy, Casey Skalla
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0226111

Sharing of gut microbial strains between selected individual sets of twins cohabitating for decades
Cited by: 21
Author(s): Hyunmin Koo, Joseph A. Hakim, David K. Crossman, Elliot J. Lefkowitz, Casey D. Morrow
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0252924

The drug development pipeline for glioblastoma—A cross sectional assessment of the FDA Orphan Drug Product designation database
Cited by: 4
Author(s): Pascal Johann, Dominic Lenz, Markus Ries
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0231178

Seasonal and latitudinal variations in sea ice algae deposition in the Northern Bering and Chukchi Seas determined by algal biomarkers
Cited by: 25
Author(s): Chelsea Wegner Koch, Lee W. Cooper, Catherine Lalande, Thomas A. Brown, Karen E. Frey, Jacqueline M. Grebmeier
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0253434

Hospital admission for type 2 diabetes mellitus under the Universal Coverage Scheme in Thailand: A time- and geographical-trend analysis, 2009–2016
Cited by: 7
Author(s): Tanapat Laowahutanon, Haruyo Nakamura, Hisateru Tachimori, Shuhei Nomura, Tippawan Liabsuetrakul, Apiradee Lim, Petch Rawdaree, Netnapis Suchonwanich, Hiroyuki Yamamoto, Aya Ishizuka, Kenji Shibuya, Hiroaki Matsubara, Virasakdi Chongsuvivatwong
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0231545

Occurrence of Mycoplasma gallisepticum in wild birds: A systematic review and meta-analysis
Cited by: 27
Author(s): Anna Sawicka, Maciej Durkalec, Grzegorz Tomczyk, Olimpia Kursa
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0195771

High-resolution temporal and regional mapping of MAPT expression and splicing in human brain development
Cited by: 55
Author(s): Marco M. Hefti, Kurt Farrell, SoongHo Kim, Kathryn R. Bowles, Mary Fowkes, Towfique Raj, John F. Crary
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0109532

Burrows of the Semi-Terrestrial Crab Ucides cordatus Enhance CO2 Release in a North Brazilian Mangrove Forest
Cited by: 38
Author(s): Nathalie Pülmanns, Karen Diele, Ulf Mehlig, Inga Nordhaus
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0248730

Variability in digestive and respiratory tract Ace2 expression is associated with the microbiome
Cited by: 26
Author(s): Sean T. Koester, Naisi Li, Daniel M. Lachance, Norma M. Morella, Neelendu Dey
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0220981

Analyses of single nucleotide polymorphisms identified by ddRAD-seq reveal genetic structure of tea germplasm and Japanese landraces for tea breeding
Cited by: 18
Author(s): Hiroto Yamashita, Hideyuki Katai, Lina Kawaguchi, Atsushi J. Nagano, Yoriyuki Nakamura, Akio Morita, Takashi Ikka
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0165691

Metagenomic Investigation of Plasma in Individuals with ME/CFS Highlights the Importance of Technical Controls to Elucidate Contamination and Batch Effects
Cited by: 15
Author(s): Ruth R. Miller, Miguel Uyaguari, Mark McCabe, Vincent Montoya, Jennifer L. Gardy, Shoshana Parker, Theodore S. Steiner, William W. L. Hsiao, Matthew J. Nesbitt, Patrick Tang, David M. Patrick
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0209124

Reducing phenolic off-flavors through CRISPR-based gene editing of the FDC1 gene in Saccharomyces cerevisiae x Saccharomyces eubayanus hybrid lager beer yeasts
Cited by: 20
Author(s): Stijn F. L. Mertens, Brigida Gallone, Jan Steensels, Beatriz Herrera‐Malaver, Jeroen Cortebeek, Robbe Nolmans, Veerle Saels, Valmik K. Vyas
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0226225

Spatial genetic structure and diversity of natural populations of Aesculus hippocastanum L. in Greece
Cited by: 9
Author(s): Łukasz Walas, Petros Ganatsas, Grzegorz Iszkuło, Peter A. Thomas, Monika Dering
Software Mentions: 2
Published: over 6 years ago

10.1186/s12864-021-07554-w

Investigating the impact of reference assembly choice on genomic analyses in a cattle breed
Cited by: 10
Author(s): Audald Lloret-Villas, Meenu Bhati, Naveen Kumar Kadri, R. Fries, Hubert Pausch
Software Mentions: 2
Published: about 5 years ago

10.7554/eLife.43657

An atlas of polygenic risk score associations to highlight putative causal relationships across the human phenome
Cited by: 148
Author(s): Tom G Richardson, Sean Harrison, Gibran Hemani, George Davey Smith
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0191853

Ezh2 does not mediate retinal ganglion cell homeostasis or their susceptibility to injury
Cited by: 10
Author(s): Lin Cheng, Lucy Wong, Naihong Yan, Richard C. Han, Honghua Yu, Chin-Lin Guo, Khulan Batsuuri, Aniket Zinzuwadia, Ryan Guan, Kin‐Sang Cho, Dong Feng Chen
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0203286

Transcriptomic insights on the virulence-controlling CsrA, BadR, RpoN, and RpoS regulatory networks in the Lyme disease spirochete
Cited by: 22
Author(s): William K. Arnold, Christina R. Savage, Kathryn G. Lethbridge, Trever C. Smith, Catherine A. Brissette, J. Seshu, Brian Stevenson
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0208159

Physical therapists’ perspectives on using contextual factors in clinical practice: Findings from an Italian national survey
Cited by: 27
Author(s): Giacomo Rossettini, Alvisa Palese, Tommaso Geri, Mirta Fiorio, Luana Colloca, Marco Testa
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0234778

Photodepletion with 2-Se-Cl prevents lethal graft-versus-host disease while preserving antitumor immunity
Cited by: 1
Author(s): Jason M. Grayson, Mildred D. Perez, Rebecca Blevins, Benjamin N. Coe, Michael R. Detty, Zachariah A. McIver
Software Mentions: 2
Published: almost 6 years ago

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Papers Mentioning ggplot2 11,441