Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: over 2 years ago
4,921 dependent packages
2,865,232 downloads last month

Enhanced Analysis
Educational Contributors: wilke@austin.utexas.edu diggsb@ohsu.edu ruderman@usc.edu joran.elias@umontana.edu rjc2003@qatar-med.cornell.edu skopf@caltech.edu m.colombo@ed.ac.uk i.kosmidis@ucl.ac.uk melimore86@ufl.edu amurray@vt.edu nick.kennedy@ed.ac.uk dongzhuoer@mail.nankai.edu.cn benjamin.reisman@vanderbilt.edu briandk@umd.edu hye@ucsd.edu thiyanga.talagala@monash.edu brenstsr@miamioh.edu saladi@caltech.edu buyske@stat.rutgers.edu rjake@sas.upenn.edu mcmurdie@stanford.edu paul@stat.auckland.ac.nz claire.mcwhite@utexas.edu luke.mcguinness@bristol.ac.uk mdlama@wm.edu hjeppson@iastate.edu
Repository Activity:
Repository Owner: tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses
  • +520 Educational commit emails
    26 contributors with educational email addresses
  • +18 Science terms in README
    9 scientific terms found in README

Very Likely Science (100)

Papers Mentioning ggplot2 11,441

10.1371/journal.pone.0226225
Spatial genetic structure and diversity of natural populations of Aesculus hippocastanum L. in Greece
Cited by: 9
Author(s): Łukasz Walas, Petros Ganatsas, Grzegorz Iszkuło, Peter A. Thomas, Monika Dering
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0209124
Reducing phenolic off-flavors through CRISPR-based gene editing of the FDC1 gene in Saccharomyces cerevisiae x Saccharomyces eubayanus hybrid lager beer yeasts
Cited by: 20
Author(s): Stijn F. L. Mertens, Brigida Gallone, Jan Steensels, Beatriz Herrera‐Malaver, Jeroen Cortebeek, Robbe Nolmans, Veerle Saels, Valmik K. Vyas
Software Mentions: 2
Published: over 7 years ago
10.3389/fvets.2019.00452
Raising Animals Without Antibiotics: U.S. Producer and Veterinarian Experiences and Opinions
Cited by: 39
Author(s): Randall S. Singer, Leah J Porter, Daniel U. Thomson, Mallory Gage, Amanda Beaudoin, Jennifer K. Wishnie
Software Mentions: 2
Published: over 6 years ago
10.3389/fvets.2020.00489
In ovo Administration of Defined Lactic Acid Bacteria Previously Isolated From Adult Hens Induced Variations in the Cecae Microbiota Structure and Enterobacteriaceae Colonization on a Virulent Escherichia coli Horizontal Infection Model in Broiler Chickens
Cited by: 4
Author(s): Margarita A. Arreguin-Nava, Brittany D. Graham, Bishnu Adhikari, Melissa Agnello, C.M. Selby, Xóchitl Hernández-Velasco, Christine N. Vuong, Bruno Solís-Cruz, Daniel Hernández-Patlán, Juan D. Latorre, G. Téllez, Billy M. Hargis
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12967-017-1171-2
Longitudinal analysis of serum oxylipin profile as a novel descriptor of the inflammatory response to surgery
Cited by: 14
Author(s): Arnaud M. Wolfer, Alasdair Scott, Claudia Rueb, Mathieu Gaudin, Ara Darzi, Jeremy K. Nicholson, Elaine Holmes, James Kinross
Software Mentions: 2
Published: about 9 years ago
10.1007/s10142-019-00709-9
Dynamic gene expression changes in response to micronutrient, macronutrient, and multiple stress exposures in soybean
Cited by: 18
Author(s): Jamie A. O’Rourke, Chantal E. McCabe, Michelle A. Graham
Software Mentions: 2
Published: over 6 years ago
10.1534/g3.113.010090
Genome Sequence of <i>Saccharomyces carlsbergensis</i>, the World’s First Pure Culture Lager Yeast
Cited by: 120
Author(s): Andrea Walther, Ana Hesselbart, Jürgen Wendland
Software Mentions: 2
Published: about 12 years ago
10.1042/BSR20194429
Identification of cell division cycle 20 as a candidate biomarker and potential therapeutic target in bladder cancer using bioinformatics analysis
Cited by: 4
Author(s): Peilin Shen, Xue‐Jun He, Lan Lin, Ying‐Kai Hong, Mingen Lin
Software Mentions: 2
Published: almost 6 years ago
10.1534/g3.115.019588
A Consensus Genetic Map for<i>Pinus taeda</i>and<i>Pinus elliottii</i>and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of<i>Pinus taeda</i>
Cited by: 37
Author(s): Jared W. Westbrook, Vikram E. Chhatre, Le-Shin Wu, Srikar Chamala, Leandro G. Neves, Patricio Muñoz, Pedro Manuel Martínez-García, David B. Neale, Matias Kirst, Keithanne Mockaitis, C. Dana Nelson, Gary F. Peter, John M. Davis, Craig S. Echt
Software Mentions: 2
Published: almost 11 years ago
10.1534/g3.115.022251
The Extent of mRNA Editing Is Limited in Chicken Liver and Adipose, but Impacted by Tissular Context, Genotype, Age, and Feeding as Exemplified with a Conserved Edited Site in COG3
Cited by: 12
Author(s): Pierre-François Roux, Laure Frésard, Morgane Boutin, Sophie Leroux, Christophe Klopp, Anis Djari, Diane Esquerré, Pascal G.P. Martin, Tatiana Zerjal, David Gourichon, Frédérique Pitel, Sandrine Lagarrigue
Software Mentions: 2
Published: over 10 years ago
10.1534/g3.116.034785
Extensive Epigenetic Changes Accompany Terminal Differentiation of Mouse Hepatocytes After Birth
Cited by: 16
Author(s): Matthew Cannon, Genay Pilarowski, Xiuli Liu, David Serre
Software Mentions: 2
Published: over 9 years ago
10.1534/g3.116.033241
Regulatory Architecture of Gene Expression Variation in the Threespine Stickleback <i>Gasterosteus aculeatus</i>
Cited by: 23
Author(s): Victoria L. Pritchard, Heidi M. Viitaniemi, R. J. Scott McCairns, Juha Merilä, Mikko Nikinmaa, Craig R. Primmer, Erica H. Leder
Software Mentions: 2
Published: over 9 years ago
10.1534/g3.116.037101
Cytoplasmic–Nuclear Incompatibility Between Wild Isolates of<i>Caenorhabditis nouraguensis</i>
Cited by: 13
Author(s): Piero Lamelza, Michael Ailion
Software Mentions: 2
Published: over 9 years ago
10.1007/s10549-018-4864-1
Screening mammography: benefit of double reading by breast density
Cited by: 22
Author(s): My von Euler‐Chelpin, Martin Lillholm, George Napolitano, Ilse Vejborg, Mads Nielsen, Elsebeth Lynge
Software Mentions: 2
Published: almost 8 years ago
10.1534/g3.117.1133
The Effect of Common Inversion Polymorphisms <i>In(2L)t</i> and <i>In(3R)Mo</i> on Patterns of Transcriptional Variation in <i>Drosophila melanogaster</i>
Cited by: 35
Author(s): Erik Lavington, Andrew D. Kern
Software Mentions: 2
Published: over 8 years ago
10.1534/g3.117.300504
Identification of Two Distinct Classes of the Human INO80 Complex Genome-Wide
Cited by: 19
Author(s): John S. Runge, Jesse R. Raab, Terry Magnuson
Software Mentions: 2
Published: about 8 years ago
10.1186/s13058-019-1214-0
BRCA1 mutation influences progesterone response in human benign mammary organoids
Cited by: 14
Author(s): Batzaya Davaadelger, Mehee Choi, Hari Singhal, Susan E. Clare, Seema A. Khan, Julie Kim
Software Mentions: 2
Published: over 6 years ago
10.7554/eLife.23249
Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity
Cited by: 38
Author(s): Michael P. Meers, Telmo Henriques, Christopher A. Lavender, Daniel J. McKay, Brian D. Strahl, Robert J. Duronio, Karen Adelman, A. Gregory Matera
Software Mentions: 2
Published: about 9 years ago
10.1534/g3.118.200398
mTOR Complex 1 Implicated in Aphid/<i>Buchnera</i> Host/Symbiont Integration
Cited by: 8
Author(s): Edward James, Honglin Feng, Alex C. C. Wilson
Software Mentions: 2
Published: almost 8 years ago
10.1534/g3.118.200499
Bulked-Segregant Analysis Coupled to Whole Genome Sequencing (BSA-Seq) for Rapid Gene Cloning in Maize
Cited by: 49
Author(s): Harry Klein, Yuguo Xiao, Phillip A. Conklin, Rajanikanth Govindarajulu, Jacob A Kelly, Michael J. Scanlon, Clinton Whipple, Madelaine Bartlett
Software Mentions: 2
Published: over 7 years ago
10.1534/g3.118.200870
The Transcriptional Regulator Hbx1 Affects the Expression of Thousands of Genes in the Aflatoxin-Producing Fungus<i>Aspergillus flavus</i>
Cited by: 16
Author(s): Jeffrey W. Cary, Sarah Entwistle, Timothy Satterlee, Brian M. Mack, Matthew K. Gilbert, Perng‐Kuang Chang, Leslie L. Scharfenstein, Yanbin Yin, Ana M. Calvo
Software Mentions: 2
Published: over 7 years ago
10.1534/g3.118.200779
Medaka Population Genome Structure and Demographic History Described via Genotyping-by-Sequencing
Cited by: 12
Author(s): Takafumi Katsumura, Shoji Oda, Hiroshi Mikami, Hiroki Oota
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0248730
Variability in digestive and respiratory tract Ace2 expression is associated with the microbiome
Cited by: 26
Author(s): Sean T. Koester, Naisi Li, Daniel M. Lachance, Norma M. Morella, Neelendu Dey
Software Mentions: 2
Published: over 5 years ago
10.1534/g3.118.200905
High-Density Linkage Map and QTLs for Growth in Snapper (<i>Chrysophrys auratus</i>)
Cited by: 17
Author(s): David T. Ashton, Peter A. Ritchie, Maren Wellenreuther
Software Mentions: 2
Published: about 7 years ago
10.3390/ht9030015
Dark Proteome Database: Studies on Disorder
Cited by: 1
Author(s): Nelson Perdigão, Pedro Pina, Cátia Rocha, João Manuel R. S. Tavares, Agostinho Rosa
Software Mentions: 2
Published: almost 6 years ago
10.1038/hortres.2017.22
Transcriptomic and metabolomic analyses of cucumber fruit peels reveal a developmental increase in terpenoid glycosides associated with age-related resistance to Phytophthora capsici
Cited by: 40
Author(s): Ben N. Mansfeld, Marivi Colle, Yunyan Kang, A. Daniel Jones, Rebecca Grumet
Software Mentions: 2
Published: about 9 years ago
10.1038/s41438-020-00395-w
Morphoagronomic characterization and whole-genome resequencing of eight highly diverse wild and weedy S. pimpinellifolium and S. lycopersicum var. cerasiforme accessions used for the first interspecific tomato MAGIC population
Cited by: 8
Author(s): Pietro Gramazio, Leandro Pereira-Dias, Santiago Vilanova, Jaime Prohens, Salvador Soler, Javier Esteras, Alfonso Garmendia, María José Díez
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0109532
Burrows of the Semi-Terrestrial Crab Ucides cordatus Enhance CO2 Release in a North Brazilian Mangrove Forest
Cited by: 38
Author(s): Nathalie Pülmanns, Karen Diele, Ulf Mehlig, Inga Nordhaus
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0195771
High-resolution temporal and regional mapping of MAPT expression and splicing in human brain development
Cited by: 55
Author(s): Marco M. Hefti, Kurt Farrell, SoongHo Kim, Kathryn R. Bowles, Mary Fowkes, Towfique Raj, John F. Crary
Software Mentions: 2
Published: about 8 years ago
10.1038/s41438-020-0284-6
Genetic diversity, population structure, and relationships of apricot (Prunus) based on restriction site-associated DNA sequencing
Cited by: 23
Author(s): Wenwen Li, Liqiang Liu, Yanan Wang, Qiuping Zhang, Guoquan Fan, Shikui Zhang, Yatong Wang, Kang Liao
Software Mentions: 2
Published: about 6 years ago
10.1042/BSR20204086
Identification of immune-related lncRNAs to improve the prognosis prediction for patients with papillary thyroid cancer
Cited by: 11
Author(s): Zhiyang Li, Weixun Lin, Jiehua Zheng, Weida Hong, Juan Zou, Taofeng Zhang, Yexi Chen, Hai Lü
Software Mentions: 2
Published: over 5 years ago
10.1002/hbm.25232
Repeatability and reproducibility of human brain morphometry using three‐dimensional magnetic resonance fingerprinting
Cited by: 14
Author(s): Shohei Fujita, Guido Buonincontri, Matteo Cencini, Issei Fukunaga, Naoyuki Takei, Rolf F. Schulte, Akifumi Hagiwara, Wataru Uchida, Masaaki Hori, Koji Kamagata, Osamu Abe, Shigeki Aoki
Software Mentions: 2
Published: over 5 years ago
10.1002/hbm.23397
Motion‐related artifacts in structural brain images revealed with independent estimates of in‐scanner head motion
Cited by: 139
Author(s): Neil K. Savalia, Phillip F. Agres, Micaela Y. Chan, Eric Feczko, James L. Kennedy, Gagan S. Wig
Software Mentions: 2
Published: almost 10 years ago
10.1007/s10745-016-9848-3
Smaller Saami Herding Groups Cooperate More in a Public Goods Experiment
Cited by: 7
Author(s): Matthew Gwynfryn Thomas, Marius Warg Næss, Bård‐Jørgen Bårdsen, Ruth Mace
Software Mentions: 2
Published: almost 10 years ago
10.1371/journal.pone.0253434
Hospital admission for type 2 diabetes mellitus under the Universal Coverage Scheme in Thailand: A time- and geographical-trend analysis, 2009–2016
Cited by: 7
Author(s): Tanapat Laowahutanon, Haruyo Nakamura, Hisateru Tachimori, Shuhei Nomura, Tippawan Liabsuetrakul, Apiradee Lim, Petch Rawdaree, Netnapis Suchonwanich, Hiroyuki Yamamoto, Aya Ishizuka, Kenji Shibuya, Hiroaki Matsubara, Virasakdi Chongsuvivatwong
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0231178
Seasonal and latitudinal variations in sea ice algae deposition in the Northern Bering and Chukchi Seas determined by algal biomarkers
Cited by: 25
Author(s): Chelsea Wegner Koch, Lee W. Cooper, Catherine Lalande, Thomas A. Brown, Karen E. Frey, Jacqueline M. Grebmeier
Software Mentions: 2
Published: about 6 years ago
10.1017/ice.2020.410
Clade-specific variation in susceptibility of <i>Candida auris</i> to broad-spectrum ultraviolet C light (UV-C)
Cited by: 9
Author(s): Piyali Chatterjee, Hosoon Choi, Brennan Ochoa, Gennifer Garmon, John David Coppin, Yonhui Allton, Janell Lukey, Marjory Williams, Dhammika H. M. L. P. Navarathna, Chetan Jinadatha
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0252924
The drug development pipeline for glioblastoma—A cross sectional assessment of the FDA Orphan Drug Product designation database
Cited by: 4
Author(s): Pascal Johann, Dominic Lenz, Markus Ries
Software Mentions: 2
Published: almost 5 years ago
10.1007/s00429-016-1279-9
The effect of unilateral disruption of the centrifugal visual system on normal eye development in chicks raised under constant light conditions
Cited by: 7
Author(s): Christopher M. Dillingham, Jeremy A. Guggenheim, Jonathan Thor Erichsen
Software Mentions: 2
Published: almost 10 years ago
10.1371/journal.pone.0226111
Sharing of gut microbial strains between selected individual sets of twins cohabitating for decades
Cited by: 21
Author(s): Hyunmin Koo, Joseph A. Hakim, David K. Crossman, Elliot J. Lefkowitz, Casey D. Morrow
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0148465
Transcriptomics Modeling of the Late-Gestation Fetal Pituitary Response to Transient Hypoxia
Cited by: 6
Author(s): Charles E. Wood, Eileen I. Chang, Elaine M. Richards, María Belén Rabaglino, Maureen Keller‐Wood
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0186290
Dynamic microbial populations along the Cuyahoga River
Cited by: 11
Author(s): Matthew Cannon, Joseph M. Craine, James Hester, Amanda Shalkhauser, E. Ricky Chan, Kyle Logue, Scott T. Small, David Serre
Software Mentions: 2
Published: over 8 years ago
10.3390/insects10080248
High-Resolution Profiling of Gut Bacterial Communities in an Invasive Beetle using PacBio SMRT Sequencing System
Cited by: 8
Author(s): Letian Xu, Liuwei Sun, Shihan Zhang, Shanshan Wang, Min Lü
Software Mentions: 2
Published: almost 7 years ago
10.3390/insects10120423
Methyl Salicylate Increases Attraction and Function of Beneficial Arthropods in Cranberries
Cited by: 20
Author(s): Jordano Salamanca, Brígida Souza, Vera Kyryczenko‐Roth, Cesar Rodriguez‐Saona
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0222503
Genetic diversity and population structure of four Chinese rabbit breeds
Cited by: 13
Author(s): Anyong Ren, Kun Du, Xianbo Jia, Rui Yang, Jie Wang, Shiyi Chen, Songjia Lai
Software Mentions: 2
Published: almost 7 years ago
10.3390/insects11060332
What Can the Bacterial Community of Atta sexdens (Linnaeus, 1758) Tell Us about the Habitats in Which This Ant Species Evolves?
Cited by: 4
Author(s): Manuela de Oliveira Ramalho, Carla Braga Martins, Maria Santina de Castro Morini, Odair Corrêa Bueno
Software Mentions: 2
Published: about 6 years ago
10.1007/s00429-014-0895-5
Oppositional COMT Val158Met effects on resting state functional connectivity in adolescents and adults
Cited by: 29
Author(s): Bernhard M. Meyer, Julia Huemer, Ulrich Rabl, Roland N. Boubela, Klaudius Kalcher, Andreas Berger, Tobias Banaschewski, Gareth J. Barker, Arun L.W. Bokde, Christian Büchel, Patricia Conrod, Sylvane Desrivières, Herta Flor, Vincent Frouin, Jürgen Gallinat, Hugh Garavan, Andreas Heinz, Bernd Ittermann, Tianye Jia, Mark Lathrop, Jean‐Luc Martinot, Frauke Nees, Marcella Rietschel, Michael N. Smolka, Lucie Bartova, Aleksandra Popović, Christian Scharinger, Harald H. Sitte, H Steiner, Max Friedrich, Siegfried Kasper, Thomas Perkmann, Nicole Praschak-Rieder, Helmuth Haslacher, Harald Esterbauer, Ewald Moser, Gunter Schümann, Lukas Pezawas
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0239998
Distinctiveness of genes contributing to growth of Pseudomonas syringae in diverse host plant species
Cited by: 10
Author(s): Tyler C. Helmann, Adam M. Deutschbauer, Steven E. Lindow
Software Mentions: 2
Published: over 5 years ago
10.3390/insects11090607
Biology and Prevalence in Northern Italy of Verrallia aucta (Diptera, Pipunculidae), a Parasitoid of Philaenus spumarius (Hemiptera, Aphrophoridae), the Main Vector of Xylella fastidiosa in Europe
Cited by: 8
Author(s): Giulia Molinatto, Stefano Demichelis, Nicola Bodino, Massimo Giorgini, Nicola Mori, Domenico Bosco
Software Mentions: 2
Published: almost 6 years ago
10.3390/insects11100717
Metabolic Cost of a Nutritional Symbiont Manifests in Delayed Reproduction in a Grain Pest Beetle
Cited by: 13
Author(s): Tobias Engl, Thorsten H. P. Schmidt, Sthandiwe Nomthandazo Kanyile, Dagmar Klebsch
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0207884
Preeclampsia and academic performance in children: A nationwide study from Iceland
Cited by: 24
Author(s): Friðgeir Andri Sverrisson, Brian T. Bateman, Thor Aspelund, Sigurgrímur Skúlason, Helga Zoëga
Software Mentions: 2
Published: over 7 years ago
10.3390/insects12010010
Effects of Entomopathogenic Fungi on Individuals as Well as Groups of Workers and Immatures of Atta sexdens rubropilosa Leaf-Cutting Ants
Cited by: 4
Author(s): Luís Eduardo Pontes Stefanelli, Tarcísio Marcos Macedo Mota Filho, Roberto da Silva Camargo, Carlos Alberto Oliveira de Matos, Luíz Carlos Forti
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0224252
Behavioral predictors of subsequent respiratory illness signs in dogs admitted to an animal shelter
Cited by: 5
Author(s): Alexandra Protopopova, Nathaniel J. Hall, Kelsea M. Brown, Allison Andrukonis, Jessica P. Hekman
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0244489
Consistent patterns in 16S and 18S microbial diversity from the shells of the common and widespread red-eared slider turtle (Trachemys scripta)
Cited by: 3
Author(s): Matthew Parks, Cameron Kedy, Casey Skalla
Software Mentions: 2
Published: over 5 years ago
10.1186/s12967-018-1537-0
Clinicopathologic implication of microRNA-197 in diffuse large B cell lymphoma
Cited by: 16
Author(s): Jeyul Yang, Ji Young Jang, Yoon Kyung Jeon, Jin Ho Paik
Software Mentions: 2
Published: about 8 years ago
10.3390/brainsci10090608
Short-Term Effects of Meditation on Sustained Attention as Measured by fNIRS
Cited by: 10
Author(s): Meltem İzzetoğlu, Patricia A. Shewokis, Kathryn Tsai, Phillip Dantoin, Kathryn Sparango, Katherine Min
Software Mentions: 2
Published: almost 6 years ago
10.3390/insects12070607
Vertical Trapping of the Coffee Berry Borer, Hypothenemus hampei (Coleoptera: Scolytinae), in Coffee
Cited by: 4
Author(s): Claudia Patricia Ruiz-Diaz, J. C. V. Rodrigues
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0231545
Occurrence of Mycoplasma gallisepticum in wild birds: A systematic review and meta-analysis
Cited by: 27
Author(s): Anna Sawicka, Maciej Durkalec, Grzegorz Tomczyk, Olimpia Kursa
Software Mentions: 2
Published: about 6 years ago
10.1016/j.idairyj.2020.104762
Review of the prevalence of foodborne pathogens in milk and dairy products in Ethiopia
Cited by: 38
Author(s): Abdi Keba, M. Laura Rolon, Aynadis Tamene, Kindinew Dessie, Jessie L. Vipham, Jasna Kovač, Ashagrie Zewdu
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0220981
Analyses of single nucleotide polymorphisms identified by ddRAD-seq reveal genetic structure of tea germplasm and Japanese landraces for tea breeding
Cited by: 18
Author(s): Hiroto Yamashita, Hideyuki Katai, Lina Kawaguchi, Atsushi J. Nagano, Yoriyuki Nakamura, Akio Morita, Takashi Ikka
Software Mentions: 2
Published: almost 7 years ago
10.1093/icb/icx090
The Effects of Captivity on the Mammalian Gut Microbiome
Cited by: 269
Author(s): Valerie J. McKenzie, Se Jin Song, Frédéric Delsuc, Tiffany Prest, Angela M. Oliverio, Timothy Korpita, Alexandra Alexiev, Katherine R. Amato, Jessica L. Metcalf, Martín M. Kowalewski, Nico L. Avenant, Andrés Link, Anthony Di Fiore, Andaine Seguin-Orlando, Claudia Feh, Ludovic Orlando, Joseph R. Mendelson, Jon G. Sanders, Rob Knight
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0165691
Metagenomic Investigation of Plasma in Individuals with ME/CFS Highlights the Importance of Technical Controls to Elucidate Contamination and Batch Effects
Cited by: 15
Author(s): Ruth R. Miller, Miguel Uyaguari, Mark McCabe, Vincent Montoya, Jennifer L. Gardy, Shoshana Parker, Theodore S. Steiner, William W. L. Hsiao, Matthew J. Nesbitt, Patrick Tang, David M. Patrick
Software Mentions: 2
Published: over 9 years ago
10.1093/iob/oby012
Comparative Prey Spectra Analyses on the Endangered Aquatic Carnivorous Waterwheel Plant (<i>Aldrovanda vesiculosa</i>, Droseraceae) at Several Naturalized Microsites in the Czech Republic and Germany
Cited by: 11
Author(s): Martin Horstmann, Lene Sørlie Heier, Sebastian Kruppert, Linda C. Weiss, Ralph Tollrian, Lubomír Adamec, Anna S. Westermeier, Thomas Speck, Simon Poppinga
Software Mentions: 2
Published: over 7 years ago
10.3390/brainsci10050261
Processing of Rhythm in Speech and Music in Adult Dyslexia
Cited by: 11
Author(s): Natalie Boll-Avetisyan, Anjali Bhatara, Barbara Höhle
Software Mentions: 2
Published: about 6 years ago
10.1111/1749-4877.12468
High‐elevation hypoxia impacts perinatal physiology and performance in a potential montane colonizer
Cited by: 12
Author(s): Jérémie Souchet, Eric J. Gangloff, Gaëlle Micheli, Coralie Bossu, Audrey Trochet, Romain Bertrand, Jean Clobert, Olivier Calvez, Albert Martínez-Silvestre, Elodie Darnet, Hugo Le Chevalier, Olivier Guillaume, Marc Mossoll‐Torres, Laurent Barthe, Gilles Pottier, Hervé Piégay, Fabien Aubret
Software Mentions: 2
Published: almost 6 years ago
10.1001/jamanetworkopen.2019.1313
Comparison of a Potential Hospital Quality Metric With Existing Metrics for Surgical Quality–Associated Readmission
Cited by: 18
Author(s): Laura A. Graham, Hillary J. Mull, Todd H. Wagner, Melanie S. Morris, Amy K. Rosen, Joshua Richman, Jeff Whittle, Edith Burns, Laurel A. Copeland, Kamal M.F. Itani, Mary T. Hawn
Software Mentions: 2
Published: about 7 years ago
10.1001/jamanetworkopen.2019.7216
Association of US Medical Marijuana Laws With Nonmedical Prescription Opioid Use and Prescription Opioid Use Disorder
Cited by: 36
Author(s): Luís Segura, Christine Mauro, Natalie S. Levy, Nicole Khauli, Morgan M. Philbin, Pia M. Mauro, Sílvia S. Martins
Software Mentions: 2
Published: almost 7 years ago
10.1001/jamanetworkopen.2019.14149
Epidemiologic Trends in <i>Clostridioides difficile</i> Infections in a Regional Community Hospital Network
Cited by: 22
Author(s): Nicholas Turner, Steven C. Grambow, Christopher W. Woods, Vance G. Fowler, Rebekah W. Moehring, Deverick J. Anderson, Sarah S. Lewis
Software Mentions: 2
Published: over 6 years ago
10.1001/jamanetworkopen.2020.0512
Assessment of Electronic Health Record Search Patterns and Practices by Practitioners in a Large Integrated Health Care System
Cited by: 17
Author(s): Halley Ruppel, Aashish Bhardwaj, R. Manickam, Julia Adler‐Milstein, Marc Flagg, Manuel A. Ballesca, Jean‐Louis Vincent
Software Mentions: 2
Published: over 6 years ago
10.7554/eLife.61611
Temperature-dependent fasciation mutants provide a link between mitochondrial RNA processing and lateral root morphogenesis
Cited by: 4
Author(s): Kurataka Otsuka, Akihito Mamiya, Mineko Konishi, Mamoru Nozaki, Atsuko Kinoshita, Hiroaki Tamaki, Masaki Arita, Masato Saito, Keijiro Yamamoto, Takushi Hachiya, Ko Noguchi, Takashi Ueda, Yusuke Yagi, Takehito Kobayashi, Takahiro Nakamura, Yasushi Sato, Takashi Hirayama, Masaru Sugiyama
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0114630
CD4+CD25hiFOXP3+ Cells in Cord Blood of Neonates Born from Filaria Infected Mother Are Negatively Associated with CD4+Tbet+ and CD4+RORγt+ T Cells
Cited by: 9
Author(s): Ulysse Ateba-Ngoa, Ghyslain Mombo-Ngoma, Eva Christine Zettlmeissl, Luciën E. P. M. van der Vlugt, Sanne E. de Jong, Pierre‐Blaise Matsiegui, Michael Ramharter, Peter G. Kremsner, Maria Yazdanbakhsh, Ayôla Akim Adegnika
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0255800
Should we keep some distance from distancing? Regulatory and post-regulatory effects of emotion downregulation
Cited by: 0
Author(s): Kersten Diers, Denise Dörfel, Anne Gärtner, Sabine Schönfeld, Henrik Walter, Alexander Strobel, Burkhard Brocke
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0153581
Best Dressed Test: A Study of the Covering Behavior of the Collector Urchin Tripneustes gratilla
Cited by: 11
Author(s): Morgan A. Ziegenhorn
Software Mentions: 2
Published: about 10 years ago
10.1002/jbm4.10372
Potential Biomarkers of the Turnover, Mineralization, and Volume Classification: Results Using <scp>NMR</scp> Metabolomics in Hemodialysis Patients
Cited by: 2
Author(s): Aline Lourenço Baptista, Kallyandra Padilha, Pamella Araujo Malagrino, Gabriela Venturini, Ana Cm Zeri, Luciene M. dos Reis, Janaina S. Martins, Vanda Jorgetti, Alexandre C. Pereira, Silvia Maria de Oliveira Titan, Rosa M.A. Moysés
Software Mentions: 2
Published: about 6 years ago
10.1172/jci.insight.121144
The TAB1-p38α complex aggravates myocardial injury and can be targeted by small molecules
Cited by: 15
Author(s): G.F. De Nicola, Rekha Bassi, C. Blake Nichols, Mariana Fernández-Caggiano, Pelin Golforoush, Dibesh Thapa, Rosaleen J. Anderson, Eva Denise Martin, Sharwari Verma, Jens Kleinjung, Adam Laing, Jonathan P. Hutchinson, Philip Eaton, James E. Clark, Michael Marber
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.ppat.1009112
Bacterial persisters in long-term infection: Emergence and fitness in a complex host environment
Cited by: 49
Author(s): Jennifer A. Bartell, David R. Cameron, Biljana Mojsoska, Janus Anders Juul Haagensen, Tacjana Pressler, Lea Mette Madsen Sommer, Kim Lewis, Søren Molin, Helle Krogh Johansen
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0188272
Genomic analysis of atypical fibroxanthoma
Cited by: 23
Author(s): Kevin Lai, Catherine A. Harwood, Karin J. Purdie, Charlotte M. Proby, Irene M. Leigh, Nishkam Ravi, Thaddeus W. Mully, Lionel Brooks, Priscilla M. Sandoval, Michael D. Rosenblum, Sarah T. Arron
Software Mentions: 2
Published: over 8 years ago
10.1089/brain.2015.0340
Sexual Dimorphism in White Matter Developmental Trajectories Using Tract-Based Spatial Statistics
Cited by: 38
Author(s): Kiran K. Seunarine, Jonathan D. Clayden, Sebastian Jentschke, Mónica Muñoz, Janine M. Cooper, Martin J. Chadwick, Tina Banks, Faraneh Vargha‐Khadem, Christopher A. Clark
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0234400
Combine performance, draft position and playing position are poor predictors of player career outcomes in the Australian Football League
Cited by: 9
Author(s): Benjamin J. Gogos, Paul Larkin, Jade Alexandra Ziems Haycraft, Neil Collier, Sam Robertson
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0126636
Clinical and Genetic Factors Associated with Progression of Geographic Atrophy Lesions in Age-Related Macular Degeneration
Cited by: 58
Author(s): Felix Graßmann, Monika Fleckenstein, Emily Y. Chew, Tobias Strunz, Steffen Schmitz-Valckenberg, Arno P. Göbel, Michael L. Klein, Rinki Ratnapriya, Anand Swaroop, Frank G. Holz, Bernhard H. F. Weber
Software Mentions: 2
Published: about 11 years ago
10.1371/journal.ppat.1009368
The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface
Cited by: 32
Author(s): Juan Carlos De la Concepcion, Josephine HR Maidment, Apinya Longya, Gui Xiao, Marina Franceschetti, Mark J. Banfield
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0231778
Traffic exhaust to wildfires: PM2.5 measurements with fixed and portable, low-cost LoRaWAN-connected sensors
Cited by: 12
Author(s): Hugh Forehead, Johan Barthélemy, Bilal Arshad, Nicolas Verstaevel, Owen Price, Pascal Perez
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1009446
The herpesvirus accessory protein γ134.5 facilitates viral replication by disabling mitochondrial translocation of RIG-I
Cited by: 15
Author(s): Liu Xing, Yijie Ma, Kathleen Voss, Michiel van Gent, Ying Chan, Michaela U. Gack, Michael Gale, Bin He
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0126961
Quantifying Geographic Variation in the Climatic Drivers of Midcontinent Wetlands with a Spatially Varying Coefficient Model
Cited by: 2
Author(s): Christian Roy
Software Mentions: 2
Published: about 11 years ago
10.1371/journal.pone.0180454
Developmental transcriptomic analyses for mechanistic insights into critical pathways involved in embryogenesis of pelagic mahi-mahi (Coryphaena hippurus)
Cited by: 9
Author(s): Elvis Genbo Xu, Edward M. Mager, Martin Grosell, John D. Stieglitz, E. Starr Hazard, Gary Hardiman, Daniel Schlenk
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0254938
“Assessing Today for a Better Tomorrow”: An observational cohort study about quality of care, mortality and morbidity among newborn infants admitted to neonatal intensive care in Guinea
Cited by: 0
Author(s): Maria Bea Merscher Alves, Conté N’fanly, Boubacar Diallo, Moustapha Sarr Mamadou, Albert Delamou, Oliver P. John, Stefanie von Felten, Ibrahima Diallo, Matthias Roth‐Kleiner
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0257205
Seroprevalence of Zika virus in pregnant women from central Thailand
Cited by: 6
Author(s): Chayawat Phatihattakorn, Artit Wongsa, Kirakorn Pongpan, Sanitra Anuwuthinawin, Sakita Mungmanthong, Manthana Wongprasert, Boonrat Tassaneetrithep
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.ppat.1009589
Respiratory syncytial virus M2-1 protein associates non-specifically with viral messenger RNA and with specific cellular messenger RNA transcripts
Cited by: 6
Author(s): Molly R. Braun, Sarah L. Noton, Emmeline L. Blanchard, Afzaal Shareef, Philip J. Santangelo, W. Evan Johnson, Rachel Fearns
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0253843
Analysis of the time course of COVID-19 cases and deaths from countries with extensive testing allows accurate early estimates of the age specific symptomatic CFR values
Cited by: 5
Author(s): Jessica E. Rothman, David Eidelberg, Samantha L Rothman, Theodore R. Holford, Douglas L. Rothman
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.ppat.1009658
NleB2 from enteropathogenic Escherichia coli is a novel arginine-glucose transferase effector
Cited by: 8
Author(s): Cristina Giogha, Nichollas E. Scott, Tania Wong Fok Lung, Georgina L. Pollock, Marina Harper, Ethan D. Goddard‐Borger, Jaclyn S. Pearson, Elizabeth L. Hartland
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0090784
Meconium Microbiome Analysis Identifies Bacteria Correlated with Premature Birth
Cited by: 348
Author(s): Alexandria N. Ardissone, Diomel M. de la Cruz, Austin G. Davis-Richardson, Kevin Rechcigl, Nan Li, Jennifer C. Drew, Roberto Murgas-Torrazza, Rajesh Sharma, Mark L. Hudak, Eric W. Triplett, Josef Neu
Software Mentions: 2
Published: over 12 years ago
10.1371/journal.pone.0255854
Serum chemerin levels: A potential biomarker of joint inflammation in women with rheumatoid arthritis
Cited by: 12
Author(s): Fabiola González-Ponce, Jorge I. Gámez-Nava, E E Perez-Guerrero, Ana Miriam Saldaña-Cruz, Maria Luisa Vazquez-Villegas, Juan M Ponce-Guarneros, Miguel Huerta, Xóchitl Trujillo, Betsabe Contreras-Haro, Alberto Daniel Rocha-Muñoz, Maria O. Carrillo-Escalante, Esther Nérida Sánchez-Rodríguez, Eli Efraín Gómez-Ramírez, César Arturo Nava-Valdivia, Ernesto Germán Cardona-Muñóz, Laura González-López
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.ppat.1009802
Modern Acinetobacter baumannii clinical isolates replicate inside spacious vacuoles and egress from macrophages
Cited by: 17
Author(s): Gabriela Sycz, Gisela Di Venanzio, Jesús S. Distel, Mariana G. Sartorio, Nguyen-Hung Le, Nichollas E. Scott, Wandy L. Beatty, Mario F. Feldman
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0190648
Fecal microbiota in the female prairie vole (Microtus ochrogaster)
Cited by: 9
Author(s): J. Thomas Curtis, Senait Assefa, Amie Francis, Gerwald A. Köhler
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pone.0226239
Microbiota composition of the dorsal patch of reproductive male Leptonycteris yerbabuenae
Cited by: 13
Author(s): Osiris Gaona, Daniel Cerqueda‐García, Luisa I. Falcón, Guillermo Vázquez-Domínguez, Patricia M. Valdespino-Castillo, Carla-Ximena Neri-Barrios
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.ppat.1009886
A 3,000-year-old, basal S. enterica lineage from Bronze Age Xinjiang suggests spread along the Proto-Silk Road
Cited by: 7
Author(s): Xutong Wu, Chao Ning, Felix M. Key, Aida Andrades Valtueña, Aditya Kumar Lankapalli, Shizhu Gao, Yang Xuan, Fan Zhang, Linlin Liu, Zhongzhi Nie, Jian Ma, Johannes Krause, Alexander Herbig, Yinqiu Cui
Software Mentions: 2
Published: almost 5 years ago
10.1186/s40813-020-00166-y
Quantification, description and international comparison of antimicrobial use on Irish pig farms
Cited by: 14
Author(s): Lorcan O’Neill, Maria Rodrigues da Costa, Finola C. Leonard, J. F. Gibbons, Julia Adriana Calderón Díaz, Gerard McCutcheon, Edgar García Manzanilla
Software Mentions: 2
Published: over 5 years ago
10.1016/j.psj.2020.11.074
Effects of monobutyrin supplementation on egg production, biochemical indexes, and gut microbiota of broiler breeders
Cited by: 3
Author(s): Xin Feng, Fangang Kong, Liwei Zheng, Qien Qi, Lina Long, Li Gong, Weilong Huang, Huihua Zhang
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0056178
Subjective Impressions Do Not Mirror Online Reading Effort: Concurrent EEG-Eyetracking Evidence from the Reading of Books and Digital Media
Cited by: 96
Author(s): Franziska Kretzschmar, Dominique Pleimling, Jana Hosemann, Stephan Füssel, Ina Bornkessel‐Schlesewsky, Matthias Schlesewsky
Software Mentions: 2
Published: over 13 years ago
10.1016/j.prevetmed.2017.12.007
Co-infection with Fasciola hepatica may increase the risk of Escherichia coli O157 shedding in British cattle destined for the food chain
Cited by: 10
Author(s): Alison Howell, Sue C. Tongue, Colin Currie, J. Evans, Diana Williams, Tom N. McNeilly
Software Mentions: 2
Published: over 8 years ago