cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3390/cancers12113361

A Pilot Study Comparing the Efficacy of Lactate Dehydrogenase Levels Versus Circulating Cell-Free microRNAs in Monitoring Responses to Checkpoint Inhibitor Immunotherapy in Metastatic Melanoma Patients
Cited by: 21
Author(s): Matías A. Bustos, Rebecca Groß, Negin Rahimzadeh, Hunter Cole, Linh Thanh Tran, Kevin Tran, Ling Takeshima, Stacey L. Stern, Steven O’Day, Dave S. B. Hoon
Software Mentions: 2
Published: almost 6 years ago

10.3390/plants10040612

Does Elevated [CO2] Only Increase Root Growth in the Topsoil? A FACE Study with Lentil in a Semi-Arid Environment
Cited by: 3
Author(s): Maryse Bourgault, Sabine Tausz‐Posch, Mark C. Greenwood, Markus Löw, Samuel Henty, Roger Armstrong, G. O'Leary, Glenn J. Fitzgerald, Michael Tausz
Software Mentions: 2
Published: over 5 years ago

10.3389/fgene.2020.01018

Schizophrenia Polygenic Risk and Brain Structural Changes in Methamphetamine-Associated Psychosis in a South African Population
Cited by: 3
Author(s): Ruth Verity Passchier, Dan J. Stein, Anne Uhlmann, Celia van der Merwe, Shareefa Dalvie
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-021-87480-9

Humans rely more on algorithms than social influence as a task becomes more difficult
Cited by: 24
Author(s): Eric Bogert, Aaron Schecter, Richard T. Watson
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-87542-y

The application of ozonated water rearranges the Vitis vinifera L. leaf and berry transcriptomes eliciting defence and antioxidant responses
Cited by: 8
Author(s): Ana Campayo, Stefania Savoi, Charles Romieu, Alberto José López-Jiménez, Kortes Serrano de la Hoz, M. Rosario Salinas, Laurent Torregrosa, Gonzalo L. Alonso
Software Mentions: 2
Published: over 5 years ago

10.1038/s41438-020-0284-6

Genetic diversity, population structure, and relationships of apricot (Prunus) based on restriction site-associated DNA sequencing
Cited by: 23
Author(s): Wenwen Li, Liqiang Liu, Yanan Wang, Qiuping Zhang, Guoquan Fan, Shikui Zhang, Yatong Wang, Kang Liao
Software Mentions: 2
Published: over 6 years ago

10.3390/plants10081690

A Systemic View of Carbohydrate Metabolism in Rice to Facilitate Productivity
Cited by: 4
Author(s): Woo‐Jong Hong, Jiang Xu, Seok-Hyun Choi, Yujin Kim, Suntae Kim, Jong‐Seong Jeon, Ki‐Hong Jung
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-021-87464-9

Levels of pathogen virulence and host resistance both shape the antibody response to an emerging bacterial disease
Cited by: 2
Author(s): Daisy Gates, Molly Staley, Luc Tardy, Mathieu Giraudeau, Geoffrey E. Hill, Kevin J. McGraw, Camille Bonneaud
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-87681-2

High-throughput enrichment and isolation of megakaryocyte progenitor cells from the mouse bone marrow
Cited by: 5
Author(s): Lucas M. Bush, Connor P. Healy, James Marvin, Tara L. Deans
Software Mentions: 2
Published: over 5 years ago

10.1093/femsre/fuab018

Ecological and Evolutionary responses to Antibiotic Treatment in the Human Gut Microbiota
Cited by: 17
Author(s): Joseph Hugh Pennycook, Pauline D. Scanlan
Software Mentions: 2
Published: over 5 years ago

10.1002/jbm4.10372

Potential Biomarkers of the Turnover, Mineralization, and Volume Classification: Results Using <scp>NMR</scp> Metabolomics in Hemodialysis Patients
Cited by: 2
Author(s): Aline Lourenço Baptista, Kallyandra Padilha, Pamella Araujo Malagrino, Gabriela Venturini, Ana Cm Zeri, Luciene M. dos Reis, Janaina S. Martins, Vanda Jorgetti, Alexandre C. Pereira, Silvia Maria de Oliveira Titan, Rosa M.A. Moysés
Software Mentions: 2
Published: about 6 years ago

10.1155/2021/5557873

Overexpression of MAL2 Correlates with Immune Infiltration and Poor Prognosis in Breast Cancer
Cited by: 3
Author(s): Yue Zhong, Zhenjie Zhuang, Peiju Mo, Qi Shang, Min Lin, Jiaqian Gong, Jingmin Huang, Haiyan Mo, Mei Huang
Software Mentions: 2
Published: almost 5 years ago

10.3390/cancers11101485

Unraveling the Heterogeneous Mutational Signature of Spontaneously Developing Tumors in MLH1−/− Mice
Cited by: 7
Author(s): Yvonne Saara Gladbach, Leonie Wiegele, Mohamed Hamed, Anna-Marie Merkenschläger, Georg Fuellen, Christian Junghanß, Claudia Maletzki
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-017-14283-2

Observed drought indices show increasing divergence across Europe
Cited by: 131
Author(s): James H. Stagge, Daniel G. Kingston, Lena M. Tallaksen, David M. Hannah
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12864-016-2365-3

Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)
Cited by: 107
Author(s): Hangxing Ren, Gaofu Wang, Lei Chen, Jing Jiang, Liangjia Liu, Nianfu Li, Jinhong Zhao, Xiaoyan Sun, Peng Zhou
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-017-13851-w

Translation efficiency is a determinant of the magnitude of miRNA-mediated repression
Cited by: 32
Author(s): Kyle A. Cottrell, Paweł Szczęsny, Sergej Djuranović
Software Mentions: 2
Published: almost 9 years ago

10.3390/genes12020216

The Genetics of Sudden Infant Death Syndrome—Towards a Gene Reference Resource
Cited by: 5
Author(s): Emma B Johannsen, Linda B. Baughn, Neeraj Sharma, Nicolina Zjacic, Mehdi Pirooznia, Eran Elhaik
Software Mentions: 2
Published: over 5 years ago

10.3390/plants9111605

Insights into Comparative Genomics, Codon Usage Bias, and Phylogenetic Relationship of Species from Biebersteiniaceae and Nitrariaceae Based on Complete Chloroplast Genomes
Cited by: 12
Author(s): Xiaofeng Chi, Faqi Zhang, Dong Qian, Shilong Chen
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-021-87999-x

Transcriptome analysis of upland cotton revealed novel pathways to scavenge reactive oxygen species (ROS) responding to Na2SO4 tolerance
Cited by: 5
Author(s): Qinqin Wang, Xuke Lu, Xiugui Chen, Waqar Afzal Malik, Delong Wang, Lingxia Zhao, Junjuan Wang, Shuai Wang, Lixue Guo, Ruifeng Cui, Mingge Han, Cun Rui, Yuexin Zhang, Yapeng Fan, Chao Chen, Wuwei Ye
Software Mentions: 2
Published: over 5 years ago

10.1172/jci.insight.121144

The TAB1-p38α complex aggravates myocardial injury and can be targeted by small molecules
Cited by: 15
Author(s): G.F. De Nicola, Rekha Bassi, C. Blake Nichols, Mariana Fernández-Caggiano, Pelin Golforoush, Dibesh Thapa, Rosaleen J. Anderson, Eva Denise Martin, Sharwari Verma, Jens Kleinjung, Adam Laing, Jonathan P. Hutchinson, Philip Eaton, James E. Clark, Michael Marber
Software Mentions: 2
Published: almost 8 years ago

10.3390/biom11050726

Fecal Metaproteomics Reveals Reduced Gut Inflammation and Changed Microbial Metabolism Following Lifestyle-Induced Weight Loss
Cited by: 8
Author(s): Ronald Biemann, Enrico Buß, Dirk Benndorf, Theresa Lehmann, Kay Schallert, Sebastian Püttker, Udo Reichl, Berend Isermann, Jochen G. Schneider, Gunter Saake, Robert Heyer
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-88171-1

Projected effects of ocean warming on an iconic pelagic fish and its fishery
Cited by: 1
Author(s): Vicenç Moltó, Miquel Palmer, Andrés Ospina-Álvarez, Sílvia Pérez-Mayol, Amina Besbes Benseddik, Mark Gatt, Beatriz Morales‐Nin, Francisco Alemany, Ignacio Alberto Catalán
Software Mentions: 2
Published: over 5 years ago

10.3390/plants10020309

Physiological Adaptation to Water Salinity in Six Wild Halophytes Suitable for Mediterranean Agriculture
Cited by: 19
Author(s): Roberta Calone, Simone Bregaglio, Rabab Sanoubar, Enrico Noli, Carla Lambertini, Lorenzo Barbanti
Software Mentions: 2
Published: over 5 years ago

10.3390/genes12040541

Genomic Imprinting at the Porcine PLAGL1 Locus and the Orthologous Locus in the Human
Cited by: 2
Author(s): Jinsoo Ahn, In-Sul Hwang, Mi-Ryung Park, Seongsoo Hwang, Kichoon Lee
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-87937-x

Systematic STR analysis of old post-vasectomy seminal fluid stains to examine evidence stored for 16 years
Cited by: 0
Author(s): Julianna Kesselring Romero, Eloisa Auler Bittencourt, José Arnaldo Soares-Vieira, Ana Cláudia Pacheco, Alexandre Learth Soares, Edna Sadayo Miazato Iwamura
Software Mentions: 2
Published: over 5 years ago

10.3390/plants9101372

Molecular and Biochemical Differences in Leaf Explants and the Implication for Regeneration Ability in Rorippa aquatica (Brassicaceae)
Cited by: 2
Author(s): Rumi Amano, Risa Momoi, Emi Omata, Taiga Nakahara, Kaori Kaminoyama, Mikiko Kojima, Yumiko Takebayashi, Shuka Ikematsu, Yuki Okegawa, Tomoaki Sakamoto, Hiroyuki Kasahara, Hitoshi Sakakibara, Ken Motohashi, Seisuke Kimura
Software Mentions: 2
Published: almost 6 years ago

10.3390/cancers11071031

GNAQ Q209R Mutations Are Highly Specific for Circumscribed Choroidal Hemangioma
Cited by: 13
Author(s): Claudia H D Le Guin, K. Metz, Stefan Kreis, Nikolaos E. Bechrakis, Norbert Bornfeld, Michael Zeschnigk, Dietmar Lohmann
Software Mentions: 2
Published: about 7 years ago

10.3390/cancers13092061

Structural Bases for the Synergistic Inhibition of Human Thymidylate Synthase and Ovarian Cancer Cell Growth by Drug Combinations
Cited by: 1
Author(s): Cecilia Pozzi, Matteo Santucci, Gaetano Marverti, Domenico D’Arca, Lorenzo Tagliazucchi, Stefania Ferrari, Gaia Gozzi, Lorena Losi, Giusy Tassone, Stefano Mangani, Glauco Ponterini, Maria Paola Costi
Software Mentions: 2
Published: over 5 years ago

10.3390/plants8070239

Identification of Factors Linked to Higher Water-Deficit Stress Tolerance in Amaranthus hypochondriacus Compared to Other Grain Amaranths and A. hybridus, Their Shared Ancestor
Cited by: 11
Author(s): América Tzitziki González-Rodríguez, Ismael Cisneros-Hernández, Jonathan Acosta Bayona, Enrique Ramı́rez-Chávez, Norma Martı́nez-Gallardo, Erika Mellado-Mojica, Mercedes G. López-Pérez, Jorge Molina‐Torres, John Paul Délano‐Frier
Software Mentions: 2
Published: about 7 years ago

10.3390/cancers13061237

Mast Cell-Derived SAMD14 Is a Novel Regulator of the Human Prostate Tumor Microenvironment
Cited by: 9
Author(s): Linda Teng, Brooke A. Pereira, Shivakumar Keerthikumar, Cheng Huang, Birunthi Niranjan, Sophie N. Lee, Michelle Richards, Ralf B. Schittenhelm, Luc Furic, David Goode, Mitchell G. Lawrence, Renea A. Taylor, Stuart John Ellem, Gail P. Risbridger, Natalie Lister
Software Mentions: 2
Published: over 5 years ago

10.3390/biom10081180

Association between Circular RNA CDR1as and Post-Infarction Cardiac Function in Pig Ischemic Heart Failure: Influence of the Anti-Fibrotic Natural Compounds Bufalin and Lycorine
Cited by: 19
Author(s): Julia Mester-Tonczar, Johannes Winkler, Patrick Einzinger, Ena Hašimbegović, Nina Kastner, Dominika Lukovic, Katrin Zlabinger, Andreas Spannbauer, Denise Traxler, Sándor Bátkai, Thomas Thum, Mariann Gyöngyösi
Software Mentions: 2
Published: about 6 years ago

10.1155/2020/8979713

Data Mining and Systematic Pharmacology to Reveal the Mechanisms of Traditional Chinese Medicine in Recurrent Respiratory Tract Infections’ Treatment
Cited by: 5
Author(s): Changyong Luo, He Yu, Tao Yang, Chen Bai, Bing He, Yurou Yan, Tiegang Liu, Junhong Wang, Xiaohong Gu
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-017-15816-5

Assessment of Genetic Diversity and Population Structure in Iranian Cannabis Germplasm
Cited by: 40
Author(s): Aboozar Soorni, Reza Fatahi, David C. Haak, Seyed Alireza Salami, Aureliano Bombarely
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12864-021-07946-y

Transcriptome analysis provides genome annotation and expression profiles in the central nervous system of Lymnaea stagnalis at different ages
Cited by: 1
Author(s): Martina Rosato, Brittany Hoelscher, Zhenguo Lin, Chidera Agwu, Fenglian Xu
Software Mentions: 2
Published: almost 5 years ago

10.3390/insects10080248

High-Resolution Profiling of Gut Bacterial Communities in an Invasive Beetle using PacBio SMRT Sequencing System
Cited by: 8
Author(s): Letian Xu, Liuwei Sun, Shihan Zhang, Shanshan Wang, Min Lü
Software Mentions: 2
Published: about 7 years ago

10.7717/peerj.8195

Effect of temperature on pollen germination for several Rosaceae species: influence of freezing conservation time on germination patterns
Cited by: 11
Author(s): Roberto Beltrán, A. Valls, Nuria Cebrián, Carlos Zornoza, Francisco J. García‐Breijo, José Reig Armiñana, Alfonso Garmendia, Hugo Merlé
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-021-88974-2

Microdroplet-based system for culturing of environmental microorganisms using FNAP-sort
Cited by: 9
Author(s): Kanako Saito, Yuichi Ota, Dieter M. Tourlousse, Satoko Matsukura, Hirotsugu Fujitani, Masamune Morita, Satoshi Tsuneda, Naohiro Noda
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.593

Swarm: robust and fast clustering method for amplicon-based studies
Cited by: 636
Author(s): Frédéric Mahe, Torbjørn Rognes, Christopher Quince, Colomban de Vargas, Micah Dunthorn
Software Mentions: 2
Published: almost 12 years ago

10.7717/peerj.11425

Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data
Cited by: 8
Author(s): Sofia G. Seabra, Ana S. B. Rodrigues, Sara E. Silva, Ana Carina Neto, Francisco Pina‐Martins, Eduardo Marabuto, Vinton Thompson, Michael R. Wilson, Selçuk Yurtsever, Antti Halkka, María Teresa Rebelo, Paulo A. V. Borges, J. A. Quartau, Chris D. Jiggins, Octávio S. Paulo
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-017-15919-z

The role of reproductive isolation in allopolyploid speciation patterns: empirical insights from the progenitors of common wheat
Cited by: 8
Author(s): Yoshihiro Matsuoka, Shigeo Takumi
Software Mentions: 2
Published: almost 9 years ago

10.7717/peerj.3563

Development rate rather than social environment influences cognitive performance in Australian black field crickets,Teleogryllus commodus
Cited by: 5
Author(s): Caitlin Anderson, Michael M. Kasumovic
Software Mentions: 2
Published: about 9 years ago

10.1038/s41598-017-16322-4

Rama: a machine learning approach for ribosomal protein prediction in plants
Cited by: 10
Author(s): Thales Francisco Mota Carvalho, José Cleydson Ferreira da Silva, Iara P. Calil, Elizabeth P. B. Fontes, Fábio Ribeiro Cerqueira
Software Mentions: 2
Published: over 8 years ago

10.7717/peerj.8240

First evidence of underwater vocalisations in hunting penguins
Cited by: 17
Author(s): Andréa Thiebault, Isabelle Charrier, Thierry Aubin, David B. Green, Pierre A. Pistorius
Software Mentions: 2
Published: over 6 years ago

10.1186/1471-2164-13-505

Comparative exome sequencing of metastatic lesions provides insights into the mutational progression of melanoma
Cited by: 31
Author(s): Jared J. Gartner, Sean Davis, Xiaomu Wei, Jimmy C. Lin, Niraj Trivedi, Jamie K. Teer, Paul S. Meltzer, Steven A. Rosenberg, Yardena Samuels
Software Mentions: 2
Published: almost 14 years ago

10.1038/s41598-021-89650-1

Homopeptide and homocodon levels across fungi are coupled to GC/AT-bias and intrinsic disorder, with unique behaviours for some amino acids
Cited by: 2
Author(s): Yue Wang, Paul M. Harrison
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-89140-4

Proteome and transcriptome analyses of wheat near isogenic lines identifies key proteins and genes of wheat bread quality
Cited by: 2
Author(s): Liangjie Lv, Aiju Zhao, Yelun Zhang, Hui Li, Xiyong Chen
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-88904-2

A new approach to radon temporal correction factor based on active environmental monitoring devices
Cited by: 6
Author(s): Tiberius Dicu, Bety-Denissa Burghele, Marius Lucian Botoș, Alexandra Cucoş, Gabriel Dobrei, Ştefan Florică, Ș Grecu, Alexandru Lupulescu, Istvan Pap, Kinga Szacsvai, Ancuta Radu Tenter, Carlos Sàinz
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-89091-w

Haplotype-resolved genome assembly enables gene discovery in the red palm weevil Rhynchophorus ferrugineus
Cited by: 16
Author(s): Guilherme Borges Dias, Musaad A. Altammami, Hamadttu A. F. El-Shafie, Fahad M. Alhoshani, Mohamed B. Al-Fageeh, Casey M. Bergman, Manee M. Manee
Software Mentions: 2
Published: over 5 years ago

10.1155/2021/6622439

Overexpression of RIPK4 Predicts Poor Prognosis and Promotes Metastasis in Ovarian Cancer
Cited by: 4
Author(s): Shaoqiu Liu, Lenian He, Chenchen Sheng, Rongjia Su, Xiaomei Wu, Yunyan Sun, Xiaowei Xi
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.5768

Geography, seasonality, and host‐associated population structure influence the fecal microbiome of a genetically depauparate Arctic mammal
Cited by: 18
Author(s): Samantha Bird, Erin Prewer, Susan Kutz, Lisa‐Marie Leclerc, Sibelle Torres Vilaça, Christopher J. Kyle
Software Mentions: 2
Published: almost 7 years ago

10.7717/peerj.10359

Exposure to low concentrations of pesticide stimulates ecological functioning in the dung beetle Onthophagus nuchicornis
Cited by: 5
Author(s): Paul Manning, G. Christopher Cutler
Software Mentions: 2
Published: over 5 years ago

10.1007/s00122-021-03786-2

Projecting results of zoned multi-environment trials to new locations using environmental covariates with random coefficient models: accuracy and precision
Cited by: 13
Author(s): Harimurti Buntaran, Johannes Forkman, Hans‐Peter Piepho
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.3777

Impact of litter quantity on the soil bacteria community during the decomposition of Quercus wutaishanica litter
Cited by: 18
Author(s): Quanchao Zeng, Yang Liu
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-017-16811-6

Profiling of different pancreatic cancer cells used as models for metastatic behaviour shows large variation in their N-glycosylation
Cited by: 42
Author(s): Stephanie Holst, Ana I. Belo, Elisa Giovannetti, Irma van Die, Manfred Wuhrer
Software Mentions: 2
Published: over 8 years ago

10.1002/ece3.2752

Is parental competitive ability in winter negatively affected by previous springs’ family size?
Cited by: 4
Author(s): Rienk W. Fokkema, Richard Ubels, Joost M. Tinbergen
Software Mentions: 2
Published: over 9 years ago

10.3390/cancers13174295

Diagnostic and Prognostic Performance of Liquid Biopsy-Derived Exosomal MicroRNAs in Thyroid Cancer Patients: A Systematic Review and Meta-Analysis
Cited by: 11
Author(s): Eman A. Toraih, Rami M. Elshazli, Lily N. Trinh, Mohammad Hussein, Abdallah A Attia, Emmanuelle Ruiz, Mourad Zerfaoui, Manal S. Fawzy, Emad Kandil
Software Mentions: 2
Published: almost 5 years ago

10.7150/thno.32260

Human Mesenchymal Stem Cell-Treated Regulatory CD23+CD43+ B Cells Alleviate Intestinal Inflammation
Cited by: 47
Author(s): Xiaoyong Chen, Chuang Cai, Dijing Xu, Qiuli Liu, Shuwei Zheng, Longshan Liu, Gang Li, Xiaoran Zhang, Xiaoping Li, Yuanchen Ma, Li Huang, Jie-ying Chen, Jiahao Shi, Xin Du, Wenjie Xia, Andy Peng Xiang, Yanwen Peng
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.7630

Measuring body dimensions of leopards (Panthera pardus) from camera trap photographs
Cited by: 8
Author(s): Allan Tarugara, Bruce Clegg, Edson Gandiwa, Victor K. Muposhi, Colin M. Wenham
Software Mentions: 2
Published: almost 7 years ago

10.7717/peerj.7024

Identify CRNDE and LINC00152 as the key lncRNAs in age-related degeneration of articular cartilage through comprehensive and integrative analysis
Cited by: 9
Author(s): Pengfei Hu, Fangfang Sun, Jisheng Ran, Lidong Wu
Software Mentions: 2
Published: about 7 years ago

10.1002/ece3.6857

Variation in plant leaf traits affects transmission and detectability of herbivore vibrational cues
Cited by: 10
Author(s): Estefania Velilla, Jernej Polajnar, Meta Virant-Doberlet, Daniël Commandeur, Ralph Simon, Johannes H. C. Cornelissen, Jacintha Ellers, Wouter Halfwerk
Software Mentions: 2
Published: almost 6 years ago

10.7150/thno.49864

Development and interpretation of a pathomics-based model for the prediction of microsatellite instability in Colorectal Cancer
Cited by: 94
Author(s): Rui Cao, Fan Yang, Si-Cong Ma, Li Liu, Yu Zhao, Yan Li, De‐Hua Wu, Tongxin Wang, Wei-Jia Lu, Weiping Cai, Hongbo Zhu, Xuejun Guo, Yuwen Lu, Junjie Kuang, Wenjing Huan, Weimin Tang, Kun Huang, Junzhou Huang, Jianhua Yao, Zhong‐Yi Dong
Software Mentions: 2
Published: over 6 years ago

10.7150/thno.51154

Metabolomic profiling reveals amino acid and carnitine alterations as metabolic signatures in psoriasis
Cited by: 36
Author(s): Chao Chen, Guixue Hou, Chunwei Zeng, Yan Ren, Xiang Chen, Cong Peng
Software Mentions: 2
Published: over 5 years ago

10.1155/2019/3482751

Identification of Key Genes and Pathways Associated with Sex Differences in Osteoarthritis Based on Bioinformatics Analysis
Cited by: 6
Author(s): Shiying Wang, Huanmei Wang, Wei Liu, Biaofang Wei
Software Mentions: 2
Published: over 6 years ago

10.7717/peerj.5826

Microbiome analysis of Pacific white shrimp gut and rearing water from Malaysia and Vietnam: implications for aquaculture research and management
Cited by: 60
Author(s): Muhammad Zarul Hanifah Md Zoqratt, Wilhelm Wei Han Eng, Binh Thanh Thai, Christopher M. Austin, Han Ming Gan
Software Mentions: 2
Published: almost 8 years ago

10.3390/nu12082386

Hydroxytyrosol as a Promising Ally in the Treatment of Fibromyalgia
Cited by: 6
Author(s): Jorge A. Ramírez-Tejero, Esther Martı́nez-Lara, M.A. Peinado, Marı́a Luisa Del Moral, Eva Siles
Software Mentions: 2
Published: about 6 years ago

10.3390/insects10120423

Methyl Salicylate Increases Attraction and Function of Beneficial Arthropods in Cranberries
Cited by: 20
Author(s): Jordano Salamanca, Brígida Souza, Vera Kyryczenko‐Roth, Cesar Rodriguez‐Saona
Software Mentions: 2
Published: over 6 years ago

10.7717/peerj.4681

Growth Score: a single metric to define growth in 96-well phenotype assays
Cited by: 1
Author(s): Daniel A. Cuevas, Robert A. Edwards
Software Mentions: 2
Published: over 8 years ago

10.1093/femsec/fiaa021

Methanogenic response to long-term permafrost thaw is determined by paleoenvironment
Cited by: 22
Author(s): Stine Holm, Josefine Walz, Fabian Horn, Shuai Yang, Mikhail N. Grigoriev, Dirk Wagner, Christian Knoblauch, Susanne Liebner
Software Mentions: 2
Published: over 6 years ago

10.7717/peerj.11183

DXA reference values of the humanoid sheep model in preclinical studies
Cited by: 1
Author(s): Christoph Biehl, J. Schmitt, Sabine Stoetzel, Deeksha Malhan, Fathi Hassan, Gero Knapp, Christian Heiß, Thaqif El Khassawna
Software Mentions: 2
Published: over 5 years ago

10.7150/thno.61810

Endothelial cell infection and dysfunction, immune activation in severe COVID-19
Cited by: 54
Author(s): Zhongnan Qin, Fengming Liu, Robert V Blair, Chenxiao Wang, Haoran Yang, Joseph C. Mudd, joshua M currey, Naoki Iwanaga, Jie He, Mengye Ren, Kun Han, Cecily C. Midkiff, Mohammad Afaque Alam, Bertal H. Aktas, Richard S. Vander Heide, Ronald S. Veazey, Giovanni Piedimonte, Nicholas J. Maness, Süleyman Ergün, Franck Mauvais-Jarvis, Jay Rappaport, Jay K. Kolls, Xuebin Qin
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.7569

Monitoring public awareness about the endangered northern bald ibis: a case study involving primary school children as citizen scientists
Cited by: 7
Author(s): Didone Frigerio, Verena Puehringer-Sturmayr, Brigitte Neuböck-Hubinger, Gudrun Gegendorfer, Kurt Kotrschal, Katharina Hirschenhauser
Software Mentions: 2
Published: almost 7 years ago

10.7717/peerj.9362

Identification of candidate genes and prognostic value analysis in patients with PDL1-positive and PDL1-negative lung adenocarcinoma
Cited by: 3
Author(s): Xin Qi, Chunjian Qi, Xindan Kang, Yi Hu, Weidong Han
Software Mentions: 2
Published: about 6 years ago

10.1089/thy.2020.0307

Limitations of Detecting Genetic Variants from the RNA Sequencing Data in Tissue and Fine-Needle Aspiration Samples
Cited by: 15
Author(s): Cihan Kaya, Princesca Dorsaint, Stephanie Mercurio, Alexander M Campbell, Kenneth Eng, Marina N. Nikiforova, Olivier Elemento, Andrea Sboner
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-017-16614-9

The importance of filamentous cyanobacteria in the development of oxygenic photogranules
Cited by: 75
Author(s): Kim Milferstedt, Wenye Camilla Kuo-Dahab, Caitlyn S. Butler, Jérôme Hamelin, Ahmed S. Abouhend, Kristie Stauch-White, Adam McNair, Christopher Watt, Blanca I. Carbajal-González, Sona Dolan, Chul Park
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-017-18343-5

Optimising monitoring efforts for secretive snakes: a comparison of occupancy and N-mixture models for assessment of population status
Cited by: 27
Author(s): Robert John Ward, Richard A. Griffiths, John W. Wilkinson, Nina Cornish
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.ppat.1009112

Bacterial persisters in long-term infection: Emergence and fitness in a complex host environment
Cited by: 49
Author(s): Jennifer A. Bartell, David R. Cameron, Biljana Mojsoska, Janus Anders Juul Haagensen, Tacjana Pressler, Lea Mette Madsen Sommer, Kim Lewis, Søren Molin, Helle Krogh Johansen
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.6819

Beliefs are multidimensional and vary in stability over time - psychometric properties of the Beliefs and Values Inventory (BVI)
Cited by: 3
Author(s): Joseph M Barnby, Vaughan Bell, Luke Sheridan Rains, Mitul A. Mehta, Quinton Deeley
Software Mentions: 2
Published: over 7 years ago

10.3390/toxins8090256

Presence of the Cyanotoxin Microcystin in Arctic Lakes of Southwestern Greenland
Cited by: 18
Author(s): Jessica V. Trout‐Haney, Zachary T. Wood, Kathryn L. Cottingham
Software Mentions: 2
Published: almost 10 years ago

10.3389/fgene.2021.739781

Chromosome-Scale Genome Assembly and Transcriptome Assembly of Kawakawa Euthynnus affinis; A Tuna-Like Species
Cited by: 3
Author(s): Miloš Havelka, Eitaro Sawayama, Taiju Saito, Kazutoshi Yoshitake, Daiki Saka, Toshinao Ineno, Shuichi Asakawa, Motohiro Takagi, Ryoji Goto, Takahiro Matsubara
Software Mentions: 2
Published: almost 5 years ago

10.3390/ijms22031107

Reactive Oxygen Species Accumulation Strongly Allied with Genetic Male Sterility Convertible to Cytoplasmic Male Sterility in Kenaf
Cited by: 6
Author(s): Liu Yiding, Bujin Zhou, Aziz Khan, Jie Zheng, Farman Ullah Dawar, Kashif Akhtar, Ran Zhou
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-017-14943-3

Cigarette smoking is associated with an altered vaginal tract metabolomic profile
Cited by: 71
Author(s): Tiffanie M. Nelson, Joanna-Lynn C. Borgogna, Ryan D. Michalek, David W. Roberts, Jessica M. Rath, Elbert D. Glover, Jacques Ravel, Michelle Shardell, Carl J. Yeoman, Rebecca M. Brotman
Software Mentions: 2
Published: over 8 years ago

10.3390/toxins11060319

Deoxynivalenol-3-Glucoside Content Is Highly Associated with Deoxynivalenol Levels in Two-Row Barley Genotypes of Importance to Canadian Barley Breeding Programs
Cited by: 21
Author(s): James R. Tucker, Ana Badea, Richard Blagden, Kerri Pleskach, Sheryl A. Tittlemier, W. G. Dilantha Fernando
Software Mentions: 2
Published: about 7 years ago

10.3390/toxins11070420

Fire Ant Venom Alkaloids Inhibit Biofilm Formation
Cited by: 14
Author(s): Danielle B. Carvalho, Eduardo Gonçalves Paterson Fox, Diogo Gama dos Santos, Joab Sampaio de Sousa, Denise Maria Guimarães Freire, Fábio César Sousa Nogueira, Gilberto B. Domont, Lívia Vieira Araujo de Castilho, Ednildo A. Machado
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-018-19154-y

Moderate decline in select synaptic markers in the prefrontal cortex (BA9) of patients with Alzheimer’s disease at various cognitive stages
Cited by: 46
Author(s): Odile Poirel, Sébastien Mella, Catherine Videau, Lauriane Ramet, Maria Antonietta Davoli, Étienne Herzog, Pavel Katsel, Naguib Mechawar, Vahram Haroutunian, Jacques Epelbaum, Stéphanie Daumas, Salah El Mestikawy
Software Mentions: 2
Published: over 8 years ago

10.3390/cancers13061377

The Implementation of DNA Methylation Profiling into a Multistep Diagnostic Process in Pediatric Neuropathology: A 2-Year Real-World Experience by the French Neuropathology Network
Cited by: 9
Author(s): Mélanie Pagès, Emmanuelle Uro‐Coste, Carole Colin, David Meyronet, Guillaume Gauchotte, Claude‐Alain Maurage, Audrey Rousseau, Catherine Godfraind, Karima Mokhtari, Karen Silva, Dominique Figarella‐Branger, Pascale Varlet
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.4223

Scaling marine fish movement behavior from individuals to populations
Cited by: 10
Author(s): Christopher A. Griffiths, Toby A. Patterson, Julia L. Blanchard, David Righton, Serena Wright, Jonathan W. Pitchford, Paul G. Blackwell
Software Mentions: 2
Published: about 8 years ago

10.3390/toxins12020101

In Vitro Rumen Simulations Show a Reduced Disappearance of Deoxynivalenol, Nivalenol and Enniatin B at Conditions of Rumen Acidosis and Lower Microbial Activity
Cited by: 29
Author(s): Sandra Debevere, An Cools, Siegrid De Baere, Geert Haesaert, Michael Rychlik, Siska Croubels, Veerle Fievez
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-19147-x

Effluent and serum protein N-glycosylation is associated with inflammation and peritoneal membrane transport characteristics in peritoneal dialysis patients
Cited by: 11
Author(s): Evelina Ferrantelli, Karima Farhat, Agnes L. Hipgrave Ederveen, Karli R. Reiding, Robert H.J. Beelen, Frans J. van Ittersum, Manfred Wuhrer, Viktoria Dotz
Software Mentions: 2
Published: over 8 years ago

10.3390/toxins12060405

Evaluation of the Efficacy of Mycotoxin Modifiers and Mycotoxin Binders by Using an In Vitro Rumen Model as a First Screening Tool
Cited by: 10
Author(s): Sandra Debevere, Dian Schatzmayr, Nicole Reisinger, Markus Aleschko, Geert Haesaert, Michael Rychlik, Siska Croubels, Veerle Fievez
Software Mentions: 2
Published: about 6 years ago

10.3390/genes12050749

Molecular Pathways Associated with Kallikrein 6 Overexpression in Colorectal Cancer
Cited by: 3
Author(s): Ritu Pandey, Muhan Zhou, Yuliang Chen, Dalila Darmoul, Conner C. Kisiel, Valentine Nfonsam, Natalia A. Ignatenko
Software Mentions: 2
Published: over 5 years ago

10.3390/toxins12090553

A Functional ClpXP Protease is Required for Induction of the Accessory Toxin Genes, tst, sed, and sec
Cited by: 8
Author(s): Jenny Schelin, Marianne Thorup Cohn, Barbro Frisk, Dorte Frees
Software Mentions: 2
Published: almost 6 years ago

10.3390/cancers13061397

Mutations Associated with No Durable Clinical Benefit to Immune Checkpoint Blockade in Non-S-Cell Lung Cancer
Cited by: 8
Author(s): Guangsheng Zhu, Dian Ren, Xi Liu, Ruifeng Shi, Shuai Zhu, Ning Zhou, Lingling Zu, Ramon Andrade de Mello, Jun Chen, Song Xu
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2164-15-601

Whole-genome sequence analysis reveals differences in population management and selection of European low-input pig breeds
Cited by: 43
Author(s): J.M. Herrero-Medrano, Hendrik‐Jan Megens, Martien A. M. Groenen, Mirte Bosse, Miguel Pérez‐Enciso, R.P.M.A. Crooijmans
Software Mentions: 2
Published: over 12 years ago

10.1038/s41598-018-19862-5

Functional metagenomics identifies novel genes ABCTPP, TMSRP1 and TLSRP1 among human gut enterotypes
Cited by: 36
Author(s): Manoj Kumar Verma, Vasim Ahmed, Shashank Gupta, Jitendra Kumar, Rajesh Pandey, Vibha Mandhan, Nar Singh Chauhan
Software Mentions: 2
Published: over 8 years ago

10.3390/toxins13080509

Differing Effects of Vinegar on Pelagia noctiluca (Cnidaria: Scyphozoa) and Carybdea marsupialis (Cnidaria: Cubozoa) Stings—Implications for First Aid Protocols
Cited by: 7
Author(s): Ainara Ballesteros, Macarena Marambio, Verónica Fuentes, Mridvika Narda, Andreu Santín, Josep-Marı́a Gili
Software Mentions: 2
Published: about 5 years ago

10.1002/ece3.7277

How environmental stressors affect reproductive potential in a saltmarsh plant species Plantago maritima
Cited by: 1
Author(s): Magdalena Lazarus, J. Mazur, Katarzyna Wszałek-Rożek, Adrian Zwolicki
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.6790

Redefining floristic zones in the Korean Peninsula using high‐resolution georeferenced specimen data and self‐organizing maps
Cited by: 2
Author(s): Songhie Jung, Yong Chan Cho
Software Mentions: 2
Published: almost 6 years ago

10.3390/toxins13090652

Validation and Application of a Low-Cost Sorting Device for Fumonisin Reduction in Maize
Cited by: 4
Author(s): William C. Stafstrom, Julie A. Wushensky, John Fuchs, Wenwei Xu, Nnenna Ezera, Rebecca Nelson
Software Mentions: 2
Published: almost 5 years ago

10.7717/peerj.11474

Autonomous Sensory Meridian Response self-reporters showed higher scores for cognitive reappraisal as an emotion regulation strategy
Cited by: 12
Author(s): Ricardo Morales, Daniela Ramírez-Benavides, Mario Villena‐González
Software Mentions: 2
Published: about 5 years ago

10.1186/s12864-020-6735-5

Genomic variation among closely related Vibrio alginolyticus strains is located on mobile genetic elements
Cited by: 17
Author(s): Cynthia Maria Chibani, Olivia Roth, Heiko Liesegang, Carolin Charlotte Wendling
Software Mentions: 2
Published: over 6 years ago

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