cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0059624

Etiology and Audiological Outcomes at 3 Years for 364 Children in Australia
Cited by: 44
Author(s): Hans Henrik M. Dahl, Teresa Y. C. Ching, Wendy Hutchison, Sanna Hou, Mark Seeto, Jessica Sjahalam-King
Software Mentions: 3
Published: about 13 years ago

10.3389/fonc.2021.690298

Effects of Inflammation on the Immune Microenvironment in Gastric Cancer
Cited by: 10
Author(s): Wenjie Zhao, Mingqing Liu, Mingyue Zhang, Yachen Wang, Yingli Zhang, Shiji Wang, Nan Zhang
Software Mentions: 3
Published: almost 5 years ago

10.3389/fonc.2021.620981

Radiomics Model Based on MR Images to Discriminate Pancreatic Ductal Adenocarcinoma and Mass-Forming Chronic Pancreatitis Lesions
Cited by: 13
Author(s): Yan Deng, Bing Ming, Ting Zhou, Jiali Wu, Yong Chen, Pei Liu, Ju Zhang, Shiyong Zhang, Tianwu Chen, Xiaoming Zhang
Software Mentions: 3
Published: about 5 years ago

10.3389/fimmu.2017.00723

Unperturbed Cytotoxic Lymphocyte Phenotype and Function in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Patients
Cited by: 15
Author(s): Jakob Theorell, Indrė Bilevičiūtė-Ljungar, Bianca Tesi, Heinrich Schlums, Mette Sophie Johnsgaard, Babak Asadi-Azarbaijani, Elin Bolle Strand, Yenan T. Bryceson
Software Mentions: 3
Published: almost 9 years ago

10.1101/2020.08.03.235242

Robotic High-Throughput Biomanufacturing and Functional Differentiation of Human Pluripotent Stem Cells
Cited by: 3
Author(s): Carlos A. Tristan, Pinar Ormanoglu, Jaroslav Slamecka, Claire Malley, Pei-Hsuan Chu, Vukasin M. Jovanovic, Yeliz Gedik, Charles Bonney, Elena Barnaeva, John C. Braisted, Sunil K. Mallanna, Dorjbal Dorjsuren, Michael J. Iannotti, Ty C. Voss, Sam Michael, Anton Simeonov, Ilyas Singeç
Software Mentions: 3
Published: almost 6 years ago

10.3390/molecules25184156

Occurrence of Acrylamide in Italian Baked Products and Dietary Exposure Assessment
Cited by: 15
Author(s): Francesco Esposito, Salvatore Velotto, Teresa Rea, Tommaso Stasi, Teresa Cirillo
Software Mentions: 3
Published: almost 6 years ago

10.1101/2020.12.11.421057

Oligonucleotide Capture Sequencing of the SARS-CoV-2 Genome and Subgenomic Fragments from COVID-19 Individuals
Cited by: 8
Author(s): Harshavardhan Doddapaneni, Sara Javornik Cregeen, Richard Sucgang, Qingchang Meng, Xiang Qin, Vasanthi Avadhanula, Hsu Chao, Vipin Menon, Erin Nicholson, David Henke, Felipe-Andrés Piedra, Anubama Rajan, Zeineen Momin, Kavya Kottapalli, Kristi L. Hoffman, Fritz J. Sedlazeck, Ginger Metcalf, Pedro A. Piedra, Donna M. Muzny, Joseph F. Petrosino, Richard A. Gibbs
Software Mentions: 3
Published: over 5 years ago

10.3906/biy-2005-21

Signature changes in the expressions of protein-coding genes, lncRNAs, and repeat elements in early and late cellular senescence
Cited by: 4
Author(s): Gökhan Karakülah, Cihangir Yandım
Software Mentions: 3
Published: over 5 years ago

10.3390/molecules26164757

The Need for Community Standards to Enable Accurate Comparison of Glycoproteomics Algorithm Performance
Cited by: 10
Author(s): William Edwin Hackett, Joseph Zaia
Software Mentions: 3
Published: almost 5 years ago

10.1093/gbe/evab064

The Effects of GC-Biased Gene Conversion on Patterns of Genetic Diversity among and across Butterfly Genomes
Cited by: 8
Author(s): Jesper Boman, Carina F. Mugal, Niclas Backström
Software Mentions: 3
Published: about 5 years ago

10.1007/s00421-021-04744-y

Short-term heat acclimation preserves knee extensor torque but does not improve 20 km self-paced cycling performance in the heat
Cited by: 4
Author(s): John O. Osborne, Ian Stewart, David N Borg, Kenneth W. Beagley, Robert L. Buhmann, Geoffrey M. Minett
Software Mentions: 3
Published: about 5 years ago

10.7554/eLife.65902

Mechanistic theory predicts the effects of temperature and humidity on inactivation of SARS-CoV-2 and other enveloped viruses
Cited by: 134
Author(s): Dylan H. Morris, Claude Kwe Yinda, Amandine Gamble, Fernando W. Rossine, Qishen Huang, Trenton Bushmaker, Robert J. Fischer, M. Jeremiah Matson, Neeltje van Doremalen, Peter J. Vikesland, Linsey C. Marr, Vincent J. Munster, James O. Lloyd‐Smith
Software Mentions: 3
Published: almost 5 years ago

10.3389/fnagi.2017.00249

DNA Methylation of Synaptic Genes in the Prefrontal Cortex Is Associated with Aging and Age-Related Cognitive Impairment
Cited by: 48
Author(s): Lara Ianov, Alberto Riva, Ashok Kumar, Thomas C. Foster
Software Mentions: 3
Published: almost 9 years ago

10.1186/s13063-021-05482-4

The implications of outcome truncation in reproductive medicine RCTs: a simulation platform for trialists and simulation study
Cited by: 4
Author(s): Jack Wilkinson, Jonathan Huang, Antonia Marsden, Michael O. Harhay, Andy Vail, Stephen A Roberts
Software Mentions: 3
Published: almost 5 years ago

10.3390/metabo11040206

Spinal Muscular Atrophy after Nusinersen Therapy: Improved Physiology in Pediatric Patients with No Significant Change in Urine, Serum, and Liquor 1H-NMR Metabolomes in Comparison to an Age-Matched, Healthy Cohort
Cited by: 14
Author(s): Leon Deutsch, Damjan Osredkar, Janez Plavec, Blaž Stres
Software Mentions: 3
Published: about 5 years ago

10.3389/fimmu.2019.02762

Hypoxia Inducible Factor 1α Inhibits the Expression of Immunosuppressive Tryptophan-2,3-Dioxygenase in Glioblastoma
Cited by: 21
Author(s): Soumya R. Mohapatra, Ahmed Sadik, Lars-Oliver Tykocinski, Jörn Dietze, Gernot Poschet, Ines Heiland, Christiane A. Opitz
Software Mentions: 3
Published: over 6 years ago

10.1186/s13063-018-2681-9

Evaluation of the clinical effectiveness of bioactive glass (S53P4) in the treatment of non-unions of the tibia and femur: study protocol of a randomized controlled non-inferiority trial
Cited by: 11
Author(s): Michael C. Tanner, Raban Arved Heller, Fabian Westhauser, Matthias Miska, Thomas Ferbert, Christian Fischer, Simone Gantz, Gerhard Schmidmaier, Patrick Haubruck
Software Mentions: 3
Published: about 8 years ago

10.3389/fmicb.2018.01622

Low-Temperature Sulfidic-Ice Microbial Communities, Borup Fiord Pass, Canadian High Arctic
Cited by: 11
Author(s): Christopher B. Trivedi, Graham E. Lau, Stephen E. Grasby, Alexis S. Templeton, John R. Spear
Software Mentions: 3
Published: almost 8 years ago

10.3389/fimmu.2020.01218

Pan-Cancer Analysis of Immune Cell Infiltration Identifies a Prognostic Immune-Cell Characteristic Score (ICCS) in Lung Adenocarcinoma
Cited by: 102
Author(s): Shuguang Zuo, Min Wei, Shiqun Wang, Jie Dong, Jiwu Wei
Software Mentions: 3
Published: almost 6 years ago

10.1155/2018/1972606

Integrated Analysis of MicroRNA (miRNA) and mRNA Profiles Reveals Reduced Correlation between MicroRNA and Target Gene in Cancer
Cited by: 19
Author(s): Xingsong Li, Xiaokang Yu, Yuting He, Yuhuan Meng, Jinsheng Liang, Lizhen Huang, Hongli Du, Xueping Wang, Wanli Liu
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0250495

Willingness to vaccinate against COVID-19 among Bangladeshi adults: Understanding the strategies to optimize vaccination coverage
Cited by: 149
Author(s): Minhazul Abedin, Mohammad Aminul Islam, Fashiur Rahman, Hasan Mahmud Reza, Mohammad Zakir Hossain, Mohammad Anwar Hossain, Adittya Arefin, Ahmed Hossain
Software Mentions: 3
Published: about 5 years ago

10.3389/fimmu.2021.687151

Integrative Transcriptomic Analysis Reveals the Immune Mechanism for a CyHV-3-Resistant Common Carp Strain
Cited by: 11
Author(s): Zhiying Jia, Nan Wu, Xiaona Jiang, Heng Li, Jing Sun, Minjun Shi, Chitao Li, Yuejing Ge, Xuesong Hu, Weidong Ye, Ying Tang, Junwei Shan, Yingyin Cheng, Xiao-Qin Xia, Shi Liu
Software Mentions: 3
Published: almost 5 years ago

10.3389/fmicb.2020.00551

Crosstalk Between Female Gonadal Hormones and Vaginal Microbiota Across Various Phases of Women’s Gynecological Lifecycle
Cited by: 51
Author(s): Harrisham Kaur, Mitali Merchant, Mohammed Monzoorul Haque, Sharmila S. Mande
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0224353

Spatiotemporal analysis of historical records (2001–2012) on dengue fever in Vietnam and development of a statistical model for forecasting risk
Cited by: 11
Author(s): Bernard K. Bett, Delia Grace, Hu Suk Lee, Johanna F. Lindahl, Hung Nguyen-Viet, Phuc Pham-Duc, Nguyen Huu Quyen, Trần Anh Tú, Tran Dac Phu, Dang Quang Tan, Vũ Sinh Nam
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0077554

How Self-Generated Thought Shapes Mood—The Relation between Mind-Wandering and Mood Depends on the Socio-Temporal Content of Thoughts
Cited by: 188
Author(s): Florence J. M. Ruby, Jonathan Smallwood, Haakon Engen, Tania Singer
Software Mentions: 3
Published: over 12 years ago

10.1371/journal.pone.0179404

Insects and associated arthropods analyzed during medicolegal death investigations in Harris County, Texas, USA: January 2013- April 2016
Cited by: 36
Author(s): Michelle R. Sanford
Software Mentions: 3
Published: about 9 years ago

10.1371/journal.pone.0257207

Nasopharyngeal microbiome composition associated with Streptococcus pneumoniae colonization suggests a protective role of Corynebacterium in young children
Cited by: 9
Author(s): Lei Xu, Joshua P. Earl, Michael E. Pichichero
Software Mentions: 3
Published: almost 5 years ago

10.1186/s40649-021-00098-9

A model for the co-evolution of dynamic social networks and infectious disease dynamics
Cited by: 8
Author(s): Hendrik Nunner, Vincent Buskens, Mirjam Kretzschmar
Software Mentions: 3
Published: over 4 years ago

10.3390/molecules23071666

Lignans: A Chemometric Analysis
Cited by: 22
Author(s): Lisa I. Pilkington
Software Mentions: 3
Published: almost 8 years ago

10.3389/fonc.2021.649699

A Novel Nomogram Based on Log Odds of Metastatic Lymph Nodes to Predict Overall Survival in Patients With Perihilar Cholangiocarcinoma After Surgery
Cited by: 4
Author(s): Wei Zou, Chunyu Zhu, Zizheng Wang, Xiaojie Tan, Chenggang Li, Zhiming Zhao, Minggen Hu, Rong Liu
Software Mentions: 3
Published: almost 5 years ago

10.3389/fonc.2019.01510

Non-invasive Molecular Detection of Minimal Residual Disease in Papillary Thyroid Cancer Patients
Cited by: 9
Author(s): Hannah F. Almubarak, Ebtesam Qassem, Lamyaa Alghofaili, Ali S. Alzahrani, Bedri Karakas
Software Mentions: 3
Published: over 6 years ago

10.1038/s41398-020-01145-1

Long runs of homozygosity are associated with Alzheimer’s disease
Cited by: 5
Author(s): Sonia Moreno‐Grau, María Victoria Fernández, Itziar de Rojas, Pablo García‐González, Isabel Hernández, Fabiana Farias, John Budde, Inés Quintela, Laura Madrid, Antonio González‐Pérez, Laura Montrreal, Emilio Alarcón‐Martín, Montserrat Alegret, Olalla Maroñas, Juan A Pineda, Juan Macı́as, Marta Marquié, Sergi Valero, Alba Benaque, Jordi Clarimón, María J. Bullido, Guillermo García‐Ribas, Pau Pástor, Pascual Sánchez‐Juan, Victoria Álvarez, Gerard Piñol‐Ripoll, José María García‐Alberca, José Luis Royo, Emilio Franco‐Macías, Pablo Mir, Miguel Calero, Miguel Á. Medina, Alberto Rábano, Jesús Ávila, Carmen Antúnez, Luís Miguel Real, Adelina Orellana, Ángel Carracedo, María Eugenia Sáez, Lluís Tárraga, Merçé Boada, Carlos Cruchaga, Agustín Ruiz, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 3
Published: over 5 years ago

10.1200/PO.18.00014

Impact of Variable RNA-Sequencing Depth on Gene Expression Signatures and Target Compound Robustness: Case Study Examining Brain Tumor (Glioma) Disease Progression
Cited by: 3
Author(s): Alexey Stupnikov, Paul G. O’Reilly, Caitríona E. McInerney, Aideen C. Roddy, Philip D. Dunne, Alan Gilmore, Hayley Patricia Ellis, Tom Flannery, Estelle Healy, Stuart McIntosh, Kienan I. Savage, Kathreena M. Kurian, Frank Emmert‐Streib, Kevin M. Prise, Manuel Salto-Tellez, Darragh G. McArt
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2018.01815

Fungal Communities Along a Small-Scale Elevational Gradient in an Alpine Tundra Are Determined by Soil Carbon Nitrogen Ratios
Cited by: 63
Author(s): Yingying Ni, Teng Yang, Kaoping Zhang, Congcong Shen, Haiyan Chu
Software Mentions: 3
Published: almost 8 years ago

10.1155/2020/7232614

Age- and Organ-Specific Differences in Mitochondrial Bioenergetics in Brown Norway Rats
Cited by: 7
Author(s): Jignesh D. Pandya, Matthew C. Valdez, Joyce E. Royland, Robert C. MacPhail, Patrick G. Sullivan, Prasada Rao S. Kodavanti
Software Mentions: 3
Published: about 6 years ago

10.3390/molecules24071240

Metabolomic Profiling of the Desiccation-Tolerant Medicinal Shrub Myrothamnus flabellifolia Indicates Phenolic Variability Across Its Natural Habitat: Implications for Tea and Cosmetics Production
Cited by: 21
Author(s): Joanne Bentley, John P. Moore, Jill M. Farrant
Software Mentions: 3
Published: about 7 years ago

10.1155/2021/9991255

Identification of 5 Hub Genes Related to the Early Diagnosis, Tumour Stage, and Poor Outcomes of Hepatitis B Virus-Related Hepatocellular Carcinoma by Bioinformatics Analysis
Cited by: 13
Author(s): Rui Qiang, Zitong Zhao, Lu Tang, Qian Wang, Yanhong Wang, Qian Huang
Software Mentions: 3
Published: over 4 years ago

10.1038/s41398-019-0518-2

Plasma neurofilament light chain concentration is increased in anorexia nervosa
Cited by: 24
Author(s): Ida Nilsson, Vincent Millischer, Virginija Danylaitė Karrenbauer, Anders Juréus, Alireza Salehi, Claes Norring, Yvonne von Hausswolff-Juhlin, Martin Schalling, Kaj Blennow, Cynthia M. Bulik, Henrik Zetterberg, Mikael Landén
Software Mentions: 3
Published: almost 7 years ago

10.3390/molecules25010223

Hierarchical Structure of the Cocos nucifera (Coconut) Endocarp: Functional Morphology and its Influence on Fracture Toughness
Cited by: 24
Author(s): Stefanie Schmier, Naoe Hosoda, Thomas Speck
Software Mentions: 3
Published: over 6 years ago

10.1161/JAHA.116.004695

Pre‐Implantation Balloon Aortic Valvuloplasty and Clinical Outcomes Following Transcatheter Aortic Valve Implantation: A Propensity Score Analysis of the UK Registry
Cited by: 35
Author(s): Glen P. Martin, Matthew Sperrin, Rodrigo Bagur, Mark de Belder, Iain Buchan, Mark Gunning, Peter Ludman, Mamas A. Mamas
Software Mentions: 3
Published: over 9 years ago

10.1161/JAHA.117.007229

Relative Survival After Transcatheter Aortic Valve Implantation: How Do Patients Undergoing Transcatheter Aortic Valve Implantation Fare Relative to the General Population?
Cited by: 13
Author(s): Glen P. Martin, Matthew Sperrin, William Hulme, Peter Ludman, Mark de Belder, William D. Toff, Oras Alabas, Neil Moat, Sagar N. Doshi, Iain Buchan, John Deanfield, Chris P Gale, Mamas A. Mamas
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2020.557342

The Endogenous Alterations of the Gut Microbiota and Feces Metabolites Alleviate Oxidative Damage in the Brain of LanCL1 Knockout Mice
Cited by: 6
Author(s): Fangxing Zhang, Nana Qi, Yanyu Zeng, Mengying Bao, Yang Chen, Jinling Liao, Luyun Wei, Dehao Cao, Shengzhu Huang, Qianqian Luo, Yonghua Jiang, Zengnan Mo
Software Mentions: 3
Published: over 5 years ago

10.1155/2020/4574792

Functional Modular Network Identifies the Key Genes of Preoperative Inhalation Anesthesia and Intravenous Anesthesia in Off-Pump Coronary Artery Bypass Grafting
Cited by: 3
Author(s): Hongfei Zhao, Weitian Wang, Liping Liu, Junlong Wang, Quanzhang Yan
Software Mentions: 3
Published: almost 6 years ago

10.1007/s13361-018-1910-5

Distinct Stabilities of the Structurally Homologous Heptameric Co-Chaperonins GroES and gp31
Cited by: 5
Author(s): Andrey Dyachenko, Sem Tamara, Albert J. R. Heck
Software Mentions: 3
Published: about 8 years ago

10.1093/tas/txaa160

Plantain (Plantago lanceolata) reduces the environmental impact of farmed red deer (Cervus elaphus)1
Cited by: 4
Author(s): Matthew R. Beck, Konagh Garrett, B. R. Thompson, D.R. Stevens, Graham K. Barrell, Pablo Gregorini
Software Mentions: 3
Published: almost 6 years ago

10.3389/fpls.2021.664148

Genomic Prediction of Grain Yield in a Barley MAGIC Population Modeling Genotype per Environment Interaction
Cited by: 5
Author(s): Damiano Puglisi, Stefano Delbono, Andrea Visioni, Hakan Özkan, İbrahim Kara, Ana M. Casas, Ernesto Igartua, Giampiero Valè, Angela Roberta Lo Piero, L. Cattivelli, Alessandro Tondelli, Agostino Fricano
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0227561

Parasites modulate the gut-microbiome in insects: A proof-of-concept study
Cited by: 39
Author(s): Brian L. Fredensborg, Inga Fossdal í Kálvalíð, Thor Bech Johannesen, Christen Rune Stensvold, Henrik Vedel Nielsen, Christian M. O. Kapel
Software Mentions: 3
Published: over 6 years ago

10.1111/joa.13437

Cortical and trabecular bone structure of the hominoid capitate
Cited by: 12
Author(s): Emma E. Bird, Tracy L. Kivell, Matthew M. Skinner
Software Mentions: 3
Published: about 5 years ago

10.1093/trstmh/try068

Complex interactions in soil-transmitted helminth co-infections from a cross-sectional study in Sri Lanka
Cited by: 8
Author(s): Hannah C. Lepper, Joaquín M. Prada, Emma L Davis, Sharmini Gunawardena, T. Déirdre Hollingsworth
Software Mentions: 3
Published: almost 8 years ago

10.3389/fonc.2021.621806

Mining of RNA Methylation-Related Genes and Elucidation of Their Molecular Biology in Gallbladder Carcinoma
Cited by: 8
Author(s): Chengliang Yang, Jialei Chen, Zhe Yu, Jing Luo, Xuemei Li, Baoyong Zhou, Ning Jiang
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0246182

Early risk markers for severe clinical course and fatal outcome in German patients with COVID-19
Cited by: 5
Author(s): Paul Balfanz, Bojan Hartmann, Dirk Müller‐Wieland, Michael Kleines, Dennis Häckl, Nils Kossack, Alexander Kersten, Christian Cornelissen, Tobias Müller, Ayham Daher, Robert Stöhr, Johannes Bickenbach, Gernot Marx, Nikolaus Marx, Michael Dreher
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2020.598636

Early Cytokine Induction Upon Pseudomonas aeruginosa Infection in Murine Precision Cut Lung Slices Depends on Sensing of Bacterial Viability
Cited by: 11
Author(s): Ulrike Kolbe, Buqing Yi, Tanja Poth, Amy E. Saunders, Sébastien Boutin, Alexander H. Dalpke
Software Mentions: 3
Published: over 5 years ago

10.1186/s40104-020-00469-8

New insights into the associations among feed efficiency, metabolizable efficiency traits and related QTL regions in broiler chickens
Cited by: 19
Author(s): Wei Li, Ranran Liu, Maiqing Zheng, Furong Feng, Dawei Liu, Hyewon Lee, Guiping Zhao, Jie Wen
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2016.01231

Lichen-Associated Fungal Community in Hypogymnia hypotrypa (Parmeliaceae, Ascomycota) Affected by Geographic Distribution and Altitude
Cited by: 23
Author(s): Yanyan Wang, Yong Zheng, Xinyu Wang, Xinli Wei, Jiang-Chun Wei
Software Mentions: 3
Published: almost 10 years ago

10.3390/molecules23102622

Monitoring Protein Dynamics in Protein O-Mannosyltransferase Mutants In Vivo by Tandem Fluorescent Protein Timers
Cited by: 9
Author(s): Joan Castells-Ballester, Ewa Zatorska, Matthias Meurer, Patrick Neubert, Anke Metschies, Michael Knop, Sabine Strahl
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0206855

Workload measurement for molecular genetics laboratory: A survey study
Cited by: 6
Author(s): Enrico Tagliafico, Isabella Bernardis, Marina Grasso, Maria Rosaria D’Apice, Cristina Lapucci, Annalisa Botta, Daniela Giachino, Maria Marinelli, Paola Primignani, Silvia Russo, Ilaria Sani, Manuela Seia, Sergio Fini, Paola Rimessi, Elena Tenedini, Anna Ravani, Maurizio Genuardi, Alessandra Ferlini
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0158768

Investigation into Host Selection of the Cecal Acetogen Population in Rabbits after Weaning
Cited by: 8
Author(s): Chunlei Yang, Lan Mi, Xianqiao Hu, Jianxin Liu, Jiakun Wang
Software Mentions: 3
Published: almost 10 years ago

10.3390/ijms19092658

Genome-Wide Analysis Elucidates the Role of CONSTANS-like Genes in Stress Responses of Cotton
Cited by: 11
Author(s): Wenqiang Qin, Ya Bo Yu, Yang Jin, Xindong Wang, Ji Liu, Jianping Xi, Zhi Li, Huiqin Li, Ge Zhao, Wei Hu, Chuanjia Chen, Fuguang Li
Software Mentions: 3
Published: almost 8 years ago

10.1007/s00125-021-05490-8

Replication and cross-validation of type 2 diabetes subtypes based on clinical variables: an IMI-RHAPSODY study
Cited by: 36
Author(s): Roderick C. Slieker, Louise A. Donnelly, Hugo Fitipaldi, Gerard A Bouland, G Giordano, Mikael Åkerlund, Mathias J. Gerl, Emma Ahlqvist, Ashfaq Ali, Iulian Dragan, Andreas Festa, Michael K. Hansen, Dina Mansour Aly, Min Kim, Dmitry Kuznetsov, Florence Mehl, Christian Klose, Kai Simons, Imre Pávó, Timothy J. Pullen, Tommi Suvitaival, Asger Wretlind, Peter Rossing, Valeriya Lyssenko, Cristina Legido‐Quigley, Leif Groop, Bernard Thorens, Paul W. Franks, Mark Ibberson, Guy A. Rutter, Joline W.J. Beulens, Leen M. ‘t Hart, Ewan R. Pearson
Software Mentions: 3
Published: about 5 years ago

10.3390/toxins13090666

Is Toxin-Producing Planktothrix sp. an Emerging Species in Lake Constance?
Cited by: 4
Author(s): Corentin Fournier, Eva Riehle, Daniel R. Dietrich, David Schleheck
Software Mentions: 3
Published: almost 5 years ago

10.3389/fnbeh.2017.00219

Community Violence Exposure and Conduct Problems in Children and Adolescents with Conduct Disorder and Healthy Controls
Cited by: 25
Author(s): Linda Kersten, Noortje Vriends, Martin Steppan, Nora Maria Raschle, Martin Praetzlich, Helena Oldenhof, Robert Vermeiren, Lucres M. C. Jansen, Kathrin Ackermann, Anka Bernhard, Anne Martinelli, Karen González-Madruga, Ignazio Puzzo, Anita M. Wells, Jack C. Rogers, Roberta Clanton, Rosalind Baker, Liam Grisley, Sarah Baumann, Malou Gundlach, Gregor Kohls, Miguel Ángel González‐Torres, Eva Sesma-Pardo, Roberta Dochnal, Helen Lazaratou, Zacharias Kalogerakis, Aitana Bigorra, Areti Smaragdi, Réka Siklósi, Dimitris Dikeos, Amaia Hervás, Aranzazu Fernández‐Rivas, Stéphane A. De Brito, Kerstin Konrad, Beate Herpertz‐Dahlmann, Graeme Fairchild, Christine M. Freitag, Arne Popma, Meinhard Kieser, Christina Stadler
Software Mentions: 3
Published: over 8 years ago

10.1155/2020/2018214

Construction and Comprehensive Analysis of Dysregulated Long Noncoding RNA-Associated Competing Endogenous RNA Network in Moyamoya Disease
Cited by: 2
Author(s): Xuefeng Gu, Da-Quan Jiang, Yanwen Yang, Peng Zhang, Guoqing Wan, Wangxian Gu, Junfeng Shi, Liying Jiang, Bing Chen, Yanjun Zheng, Dingsheng Liu, Shu Guo, Changlian Lu
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0207563

The spermidine acetyltransferase SpeG regulates transcription of the small RNA rprA
Cited by: 4
Author(s): Linda I. Hu, E.V. Filippova, Joseph Dang, S. Pshenychnyi, Jiapeng Ruan, O. Kiryukhina, W.F. Anderson, Misty L. Kuhn, Alan J. Wolfe
Software Mentions: 3
Published: over 7 years ago

10.3390/molecules25133007

Aroma Investigation of New and Standard Apple Varieties Grown at Two Altitudes Using Gas Chromatography-Mass Spectrometry Combined with Sensory Analysis
Cited by: 15
Author(s): Giulia Chitarrini, N. Ðorđević, Walter Guerra, Peter Robatscher, Lidia Lozano
Software Mentions: 3
Published: almost 6 years ago

10.3390/molecules25184141

Transcriptomic and Proteomic Analysis of Clear Cell Foci (CCF) in the Human Non-Cirrhotic Liver Identifies Several Differentially Expressed Genes and Proteins with Functions in Cancer Cell Biology and Glycogen Metabolism
Cited by: 2
Author(s): Christoph Metzendorf, Katharina Wineberger, Jenny Rausch, Antonio Cigliano, Kristin Peters, Baodong Sun, Daniela Mennerich, Thomas Kietzmann, Diego F. Calvisi, Frank Dombrowski, Silvia Ribback
Software Mentions: 3
Published: almost 6 years ago

10.1007/s10803-019-04331-3

Predictors of Trauma Exposure and Trauma Diagnoses for Children with Autism and Developmental Disorders Served in a Community Mental Health Clinic
Cited by: 6
Author(s): John Hoch, Adriana M. Youssef
Software Mentions: 3
Published: over 6 years ago

10.1155/2020/8836493

Identification of Prognostic Biomarkers of Cutaneous Melanoma Based on Analysis of Tumor Mutation Burden
Cited by: 4
Author(s): Jiaqiong Lin, Ye Lin, Zhemin Huang, Xiaoyong Li
Software Mentions: 3
Published: over 5 years ago

10.3390/toxins13020124

Electric Blue: Molecular Evolution of Three-Finger Toxins in the Long-Glanded Coral Snake Species Calliophis bivirgatus
Cited by: 9
Author(s): Daniel Dashevsky, Darin R. Rokyta, Nathaniel Frank, Amanda Nouwens, Bryan G. Fry
Software Mentions: 3
Published: over 5 years ago

10.1128/JB.00607-20

Alkaline pH Increases Swimming Speed and Facilitates Mucus Penetration for Vibrio cholerae
Cited by: 9
Author(s): Nguyen T. Q. Nhu, John S. Lee, Helen J. Wang, Y. Dufour
Software Mentions: 3
Published: over 5 years ago

10.1074/jbc.M114.634816

Early Growth Response Genes 2 and 3 Regulate the Expression of Bcl6 and Differentiation of T Follicular Helper Cells
Cited by: 26
Author(s): Ane Ogbe, Tizong Miao, Alistair L. J. Symonds, Becky Omodho, Randeep Singh, Punamdip Bhullar, Suling Li, Ping Wang
Software Mentions: 3
Published: almost 11 years ago

10.3390/toxins11070431

Association of Nrf2, SOD2 and GPX1 Polymorphisms with Biomarkers of Oxidative Distress and Survival in End-Stage Renal Disease Patients
Cited by: 22
Author(s): Djurdja Jerotić, Marija Matić, Sonja Šuvakov, Katarina Vučićević, Tatjana Damjanović, Ana Savić-Radojević, Marija Plješa-Ercegovac, Vesna Ćorić, Aleksandra Stefanović, Jasmina Ivanišević, Zorana Jelić‐Ivanović, Lana McClements, Nada Dimković, Tatjana Simić
Software Mentions: 3
Published: almost 7 years ago

10.1155/2020/6403641

Separable Nonlinear Least-Squares Parameter Estimation for Complex Dynamic Systems
Cited by: 10
Author(s): Itai Dattner, Harold J. Ship, Eberhard O. Voit
Software Mentions: 3
Published: about 6 years ago

10.3390/ma14195488

Impact of Zinc Oxide Nanoparticles on the Composition of Gut Microbiota in Healthy and Autism Spectrum Disorder Children
Cited by: 7
Author(s): Rongrong Yu, Temoor Ahmed, Hubiao Jiang, Guangming Zhou, Muchen Zhang, Luqiong Lv, Bin Li
Software Mentions: 3
Published: over 4 years ago

10.1017/S2045796019000568

Perceived need and barriers to adolescent mental health care: agreement between adolescents and their parents
Cited by: 18
Author(s): Nina Schnyder, David Lawrence, Radoslaw Panczak, Michael Sawyer, Harvey Whiteford, Philip Burgess, Meredith Harris
Software Mentions: 3
Published: almost 7 years ago

10.1038/s41431-020-0693-x

Cultural variation impacts paternal and maternal genetic lineages of the Hmong-Mien and Sino-Tibetan groups from Thailand
Cited by: 15
Author(s): Wibhu Kutanan, Rasmi Shoocongdej, Metawee Srikummool, Alexander Hübner, Thanatip Suttipai, Suparat Srithawong, Jatupol Kampuansai, Mark Stoneking
Software Mentions: 3
Published: almost 6 years ago

10.3389/fimmu.2021.726472

Endocervical Regulatory T Cells Are Associated With Decreased Genital Inflammation and Lower HIV Target Cell Abundance
Cited by: 6
Author(s): Aloysious Ssemaganda, François Cholette, Michelle Perner, Cheli Kambaran, Wendy Adhiambo, Peter M. Wambugu, Henok Gebrebrhan, Amy Lee, Faisal Nuhu, Ruth S. Mwatelah, Naima Jahan, Tosin Omole, Tabitha Wanjiru, Apollo Gitau, Joshua Kimani, Lyle R. McKinnon
Software Mentions: 3
Published: over 4 years ago

10.3390/toxics8040087

Systematic Assessment of Exposure Variations on Observed Bioactivity in Zebrafish Chemical Screening
Cited by: 9
Author(s): Lindsay Wilson, Lisa Truong, Michael T. Simonich, Robert L. Tanguay
Software Mentions: 3
Published: over 5 years ago

10.1016/j.molmet.2020.100978

Functional changes of the liver in the absence of growth hormone (GH) action – Proteomic and metabolomic insights from a GH receptor deficient pig model
Cited by: 20
Author(s): Evamaria Olga Riedel, Arne Hinrichs, Elisabeth Kemter, Maik Dahlhoff, Mattias Backman, Birgit Rathkolb, Cornelia Prehn, Jerzy Adamski, Simone Renner, Andreas Blutke, Martin Hrabě de Angelis, Martin Bidlingmaier, Jochen Schopohl, Georg J. Arnold, Thomas Fröhlich, Eckhard Wolf
Software Mentions: 3
Published: about 6 years ago

10.1016/j.molmet.2019.11.009

NPY1R-targeted peptide-mediated delivery of a dual PPARα/γ agonist to adipocytes enhances adipogenesis and prevents diabetes progression
Cited by: 16
Author(s): Stefanie Wittrisch, Nora Klöting, Karin Mörl, Rima Chakaroun, Matthias Blüher, Annette G. Beck‐Sickinger
Software Mentions: 3
Published: over 6 years ago

10.3389/fimmu.2021.590532

Hypoxia Routes Tryptophan Homeostasis Towards Increased Tryptamine Production
Cited by: 6
Author(s): Soumya R. Mohapatra, Ahmed Sadik, Suraj Sharma, Gernot Poschet, Hagen M. Gegner, Tobias V. Lanz, Philippe Lucarelli, Ursula Klingmüller, Michael Platten, Ines Heiland, Christiane A. Opitz
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2020.01823

Contrasting Responses of Protistan Plant Parasites and Phagotrophs to Ecosystems, Land Management and Soil Properties
Cited by: 23
Author(s): Anna Maria Fiore‐Donno, Tim Richter-Heitmann, Michael Bonkowski
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2019.00668

High-Alpine Permafrost and Active-Layer Soil Microbiomes Differ in Their Response to Elevated Temperatures
Cited by: 34
Author(s): Petra Luláková, Carla Perez-Mon, Hana Šantrůčková, Joel Ruethi, Beat Frey
Software Mentions: 2
Published: about 7 years ago

10.3389/fmicb.2021.684386

Variation in Soil Microbial Communities Along an Elevational Gradient in Alpine Meadows of the Qilian Mountains, China
Cited by: 10
Author(s): Yulong Duan, Jing Lian, Lilong Wang, Xuyang Wang, Yongqing Luo, Wanfu Wang, Fasi Wu, Jianhua Zhao, Yun Ding, Jun Ma, Yulin Li, Yuqiang Li
Software Mentions: 2
Published: almost 5 years ago

10.1007/s11356-020-09621-3

Distance to landfill and human activities affects the debris incorporation into the white stork nests in urbanized landscape in central Spain
Cited by: 13
Author(s): Zuzanna Jagiełło, Alejandro López‐García, José I. Aguirre, Łukasz Dylewski
Software Mentions: 2
Published: about 6 years ago

10.1007/s11356-021-13885-8

Characterization of microbial response to petroleum hydrocarbon contamination in a lacustrine ecosystem
Cited by: 6
Author(s): Emilio D’Ugo, Marco Bruno, Arghya Mukherjee, Dhrubajyoti Chattopadhyay, Roberto Giuseppetti, Rita De Pace, Fabio Magurano
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2019.00581

Rhizobacterial Community Assembly Patterns Vary Between Crop Species
Cited by: 39
Author(s): Andrew Matthews, Sarah Pierce, Helen Hipperson, Ben Raymond
Software Mentions: 2
Published: about 7 years ago

10.1007/s11356-021-14508-y

Assessment of anthropogenic pollution by monitoring occurrence and distribution of chemicals in the river Liffey in Dublin
Cited by: 2
Author(s): Rosa Peñalver, Matthew Jacobs, Susan Hegarty, Fiona Regan
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2020.582655

Geographical Variability of Mineral Elements and Stability of Restrictive Mineral Elements in Terrestrial Cyanobacteria Across Gradients of Climate, Soil, and Atmospheric Wet Deposition Mineral Concentration
Cited by: 2
Author(s): Weibo Wang, Hua Li, René Guénon, Yuyi Yang, Shijun Xiao, Xiaoli Cheng, Quanfa Zhang
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2020.631444

PfAP2-G2 Is Associated to Production and Maturation of Gametocytes in Plasmodium falciparum via Regulating the Expression of PfMDV-1
Cited by: 12
Author(s): Yaozheng Xu, Dan Qiao, Yang Wen, Yifei Bi, Yuxi Chen, Zhenghui Huang, Liwang Cui, Jian Guo, Yaming Cao
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2021.695445

Effects of Dietary Energy Levels on Rumen Fermentation, Gastrointestinal Tract Histology, and Bacterial Community Diversity in Fattening Male Hu Lambs
Cited by: 12
Author(s): Qiye Wang, Yutong Zeng, Xiangfang Zeng, Xin Wang, Yancan Wang, Chunpeng Dai, Jianzhong Li, Pengfei Huang, Jing Huang, Tarique Hussain, Mingzhi Zhu, Huansheng Yang
Software Mentions: 2
Published: almost 5 years ago

10.7554/eLife.38278

The lost world of Cuatro Ciénegas Basin, a relictual bacterial niche in a desert oasis
Cited by: 39
Author(s): Valeria Souza, Alejandra Moreno‐Letelier, Michael Travisano, Luis David Alcaraz, Gabriela Olmedo, Luis E. Eguiarte
Software Mentions: 2
Published: over 7 years ago

10.1111/1462-2920.14896

Ecogenomics of the SAR11 clade
Cited by: 55
Author(s): Jose M. Haro‐Moreno, Francisco Rodrı́guez-Valera, Riccardo Rosselli, Francisco Martínez-Hernández, Juan J. Roda‐Garcia, Mónica Lluesma Gómez, Òscar Fornas, Manuel Martínez‐García, Mario López‐Pérez
Software Mentions: 2
Published: over 6 years ago

10.1111/1462-2920.15269

Unravelling lactate‐acetate and sugar conversion into butyrate by intestinal <i>Anaerobutyricum</i> and <i>Anaerostipes</i> species by comparative proteogenomics
Cited by: 34
Author(s): Sudarshan A. Shetty, Sjef Boeren, Thi Phuong Nam Bui, Hauke Smidt, Willem M. de Vos
Software Mentions: 2
Published: over 5 years ago

10.1186/s12940-015-0082-z

Building-related health impacts in European and Chinese cities: a scalable assessment method
Cited by: 7
Author(s): Jouni T. Tuomisto, Marjo Niittynen, Erkki Pärjälä, Arja Asikainen, Laura Pérez, Stephan Trüeb, Matti Jantunen, Nino Künzli, Clive E. Sabel
Software Mentions: 2
Published: over 10 years ago

10.1530/ERC-17-0442

The microbiome in PTEN hamartoma tumor syndrome
Cited by: 5
Author(s): Victoria Byrd, Ted M. Getz, Roshan Padmanabhan, Hans Arora, Charis Eng
Software Mentions: 2
Published: over 8 years ago

10.3389/fmolb.2021.682134

A Comparison of Serum and Plasma Blood Collection Tubes for the Integration of Epidemiological and Metabolomics Data
Cited by: 29
Author(s): Jennie Sotelo-Orozco, Shin-Yu Chen, Irva Hertz‐Picciotto, Carolyn M. Slupsky
Software Mentions: 2
Published: almost 5 years ago

10.7554/eLife.29144

A minimally sufficient model for rib proximal-distal patterning based on genetic analysis and agent-based simulations
Cited by: 6
Author(s): Jennifer L. Fogel, Daniel L. Lakeland, In Kyoung Mah, Francesca V. Mariani
Software Mentions: 2
Published: over 8 years ago

10.3389/fonc.2021.711673

Intra-Tumoral Activation of Endosomal TLR Pathways Reveals a Distinct Role for TLR3 Agonist Dependent Type-1 Interferons in Shaping the Tumor Immune Microenvironment
Cited by: 7
Author(s): Graham D. Thomas, Luca Micci, Wenjing Yang, Joseph A. Katakowski, Cecilia Oderup, Purnima Sundar, Xiao Wang, Kenneth G. Geles, Shobha Potluri, Shahram Salek-Ardakani
Software Mentions: 2
Published: almost 5 years ago

10.3389/fonc.2020.577443

Salvage Radiation Therapy for Patients With Relapsing Glioblastoma Multiforme and the Role of Slow Fractionation
Cited by: 1
Author(s): I. Frank Ciernik, Yann Gager, C Renner, Sybille Spieker, Nicole Arndt, Karsten Neumann
Software Mentions: 2
Published: over 5 years ago

10.3389/fonc.2021.628027

LINC00460 Is a Dual Biomarker That Acts as a Predictor for Increased Prognosis in Basal-Like Breast Cancer and Potentially Regulates Immunogenic and Differentiation-Related Genes
Cited by: 9
Author(s): Mireya Cisneros-Villanueva, Lizbett Hidalgo Pérez, Alberto Cedro‐Tanda, Mónica Peña-Luna, Marco Antonio Mancera-Rodríguez, Eduardo Hurtado-Cordova, Irene Rivera-Salgado, Alejandro Martínez-Aguirre, Silvia Jiménez-Morales, Luis Alfaro-Ruiz, Rocío Arellano-Llamas, Alberto Tenorio-Torres, Carlos Alberto Domínguez-Reyes, Felipe Villegas-Carlos, Magdalena Ríos-Romero, Alfredo Hidalgo‐Miranda
Software Mentions: 2
Published: about 5 years ago

Projects: cran: ggplot2

Enhanced Analysis

Science Score: 100/100

Bonuses:

Papers Mentioning ggplot2 11,441